MARQ 0.0.1

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  1. data/LICENSE +20 -0
  2. data/R/CustomDS.R +80 -0
  3. data/R/GEO.R +249 -0
  4. data/R/MA.R +359 -0
  5. data/README.rdoc +29 -0
  6. data/bin/marq_config +170 -0
  7. data/install_scripts/CustomDS/Rakefile +223 -0
  8. data/install_scripts/GEO/Rakefile +258 -0
  9. data/install_scripts/GEO/platforms/GPL100.yaml +7 -0
  10. data/install_scripts/GEO/platforms/GPL1002.yaml +7 -0
  11. data/install_scripts/GEO/platforms/GPL1007.yaml +7 -0
  12. data/install_scripts/GEO/platforms/GPL101.yaml +7 -0
  13. data/install_scripts/GEO/platforms/GPL1010.yaml +7 -0
  14. data/install_scripts/GEO/platforms/GPL1073.yaml +7 -0
  15. data/install_scripts/GEO/platforms/GPL1074.yaml +4 -0
  16. data/install_scripts/GEO/platforms/GPL1090.yaml +7 -0
  17. data/install_scripts/GEO/platforms/GPL1104.yaml +7 -0
  18. data/install_scripts/GEO/platforms/GPL118.yaml +7 -0
  19. data/install_scripts/GEO/platforms/GPL1205.yaml +4 -0
  20. data/install_scripts/GEO/platforms/GPL1211.yaml +7 -0
  21. data/install_scripts/GEO/platforms/GPL1213.yaml +7 -0
  22. data/install_scripts/GEO/platforms/GPL1219.yaml +4 -0
  23. data/install_scripts/GEO/platforms/GPL1223.yaml +7 -0
  24. data/install_scripts/GEO/platforms/GPL1226.yaml +7 -0
  25. data/install_scripts/GEO/platforms/GPL1229.yaml +7 -0
  26. data/install_scripts/GEO/platforms/GPL1230.yaml +7 -0
  27. data/install_scripts/GEO/platforms/GPL1231.yaml +7 -0
  28. data/install_scripts/GEO/platforms/GPL1232.yaml +7 -0
  29. data/install_scripts/GEO/platforms/GPL1260.yaml +4 -0
  30. data/install_scripts/GEO/platforms/GPL1261.yaml +4 -0
  31. data/install_scripts/GEO/platforms/GPL127.yaml +4 -0
  32. data/install_scripts/GEO/platforms/GPL128.yaml +7 -0
  33. data/install_scripts/GEO/platforms/GPL1290.yaml +7 -0
  34. data/install_scripts/GEO/platforms/GPL1292.yaml +7 -0
  35. data/install_scripts/GEO/platforms/GPL1293.yaml +7 -0
  36. data/install_scripts/GEO/platforms/GPL1294.yaml +7 -0
  37. data/install_scripts/GEO/platforms/GPL1295.yaml +7 -0
  38. data/install_scripts/GEO/platforms/GPL13.yaml +4 -0
  39. data/install_scripts/GEO/platforms/GPL1310.yaml +7 -0
  40. data/install_scripts/GEO/platforms/GPL1313.yaml +7 -0
  41. data/install_scripts/GEO/platforms/GPL1323.yaml +7 -0
  42. data/install_scripts/GEO/platforms/GPL1331.yaml +7 -0
  43. data/install_scripts/GEO/platforms/GPL1352.yaml +4 -0
  44. data/install_scripts/GEO/platforms/GPL1355.yaml +4 -0
  45. data/install_scripts/GEO/platforms/GPL1382.yaml +7 -0
  46. data/install_scripts/GEO/platforms/GPL1387.yaml +7 -0
  47. data/install_scripts/GEO/platforms/GPL1397.yaml +4 -0
  48. data/install_scripts/GEO/platforms/GPL14.yaml +7 -0
  49. data/install_scripts/GEO/platforms/GPL1412.yaml +7 -0
  50. data/install_scripts/GEO/platforms/GPL1415.yaml +7 -0
  51. data/install_scripts/GEO/platforms/GPL1420.yaml +7 -0
  52. data/install_scripts/GEO/platforms/GPL144.yaml +7 -0
  53. data/install_scripts/GEO/platforms/GPL1449.yaml +7 -0
  54. data/install_scripts/GEO/platforms/GPL1458.yaml +7 -0
  55. data/install_scripts/GEO/platforms/GPL1523.yaml +7 -0
  56. data/install_scripts/GEO/platforms/GPL1524.yaml +7 -0
  57. data/install_scripts/GEO/platforms/GPL1528.yaml +7 -0
  58. data/install_scripts/GEO/platforms/GPL153.yaml +7 -0
  59. data/install_scripts/GEO/platforms/GPL1530.yaml +7 -0
  60. data/install_scripts/GEO/platforms/GPL1535.yaml +4 -0
  61. data/install_scripts/GEO/platforms/GPL155.yaml +7 -0
  62. data/install_scripts/GEO/platforms/GPL163.yaml +7 -0
  63. data/install_scripts/GEO/platforms/GPL168.yaml +7 -0
  64. data/install_scripts/GEO/platforms/GPL169.yaml +7 -0
  65. data/install_scripts/GEO/platforms/GPL1704.yaml +4 -0
  66. data/install_scripts/GEO/platforms/GPL1708.yaml +7 -0
  67. data/install_scripts/GEO/platforms/GPL1739.yaml +7 -0
  68. data/install_scripts/GEO/platforms/GPL1740.yaml +4 -0
  69. data/install_scripts/GEO/platforms/GPL1749.yaml +7 -0
  70. data/install_scripts/GEO/platforms/GPL177.yaml +7 -0
  71. data/install_scripts/GEO/platforms/GPL1790.yaml +7 -0
  72. data/install_scripts/GEO/platforms/GPL1792.yaml +7 -0
  73. data/install_scripts/GEO/platforms/GPL181.yaml +7 -0
  74. data/install_scripts/GEO/platforms/GPL1818.yaml +7 -0
  75. data/install_scripts/GEO/platforms/GPL1820.yaml +4 -0
  76. data/install_scripts/GEO/platforms/GPL1823.yaml +7 -0
  77. data/install_scripts/GEO/platforms/GPL1826.yaml +7 -0
  78. data/install_scripts/GEO/platforms/GPL183.yaml +7 -0
  79. data/install_scripts/GEO/platforms/GPL1831.yaml +7 -0
  80. data/install_scripts/GEO/platforms/GPL1833.yaml +7 -0
  81. data/install_scripts/GEO/platforms/GPL1872.yaml +4 -0
  82. data/install_scripts/GEO/platforms/GPL1911.yaml +7 -0
  83. data/install_scripts/GEO/platforms/GPL1914.yaml +4 -0
  84. data/install_scripts/GEO/platforms/GPL1928.yaml +7 -0
  85. data/install_scripts/GEO/platforms/GPL1942.yaml +7 -0
  86. data/install_scripts/GEO/platforms/GPL1945.yaml +7 -0
  87. data/install_scripts/GEO/platforms/GPL1964.yaml +7 -0
  88. data/install_scripts/GEO/platforms/GPL198.yaml +4 -0
  89. data/install_scripts/GEO/platforms/GPL1981.yaml +4 -0
  90. data/install_scripts/GEO/platforms/GPL200.yaml +7 -0
  91. data/install_scripts/GEO/platforms/GPL2006.yaml +7 -0
  92. data/install_scripts/GEO/platforms/GPL201.yaml +4 -0
  93. data/install_scripts/GEO/platforms/GPL2011.yaml +7 -0
  94. data/install_scripts/GEO/platforms/GPL2026.yaml +7 -0
  95. data/install_scripts/GEO/platforms/GPL205.yaml +7 -0
  96. data/install_scripts/GEO/platforms/GPL207.yaml +7 -0
  97. data/install_scripts/GEO/platforms/GPL2136.yaml +7 -0
  98. data/install_scripts/GEO/platforms/GPL220.yaml +7 -0
  99. data/install_scripts/GEO/platforms/GPL226.yaml +7 -0
  100. data/install_scripts/GEO/platforms/GPL24.yaml +4 -0
  101. data/install_scripts/GEO/platforms/GPL246.yaml +4 -0
  102. data/install_scripts/GEO/platforms/GPL247.yaml +7 -0
  103. data/install_scripts/GEO/platforms/GPL2507.yaml +4 -0
  104. data/install_scripts/GEO/platforms/GPL2529.yaml +4 -0
  105. data/install_scripts/GEO/platforms/GPL2531.yaml +7 -0
  106. data/install_scripts/GEO/platforms/GPL254.yaml +7 -0
  107. data/install_scripts/GEO/platforms/GPL2569.yaml +7 -0
  108. data/install_scripts/GEO/platforms/GPL257.yaml +7 -0
  109. data/install_scripts/GEO/platforms/GPL2598.yaml +7 -0
  110. data/install_scripts/GEO/platforms/GPL260.yaml +7 -0
  111. data/install_scripts/GEO/platforms/GPL2614.yaml +4 -0
  112. data/install_scripts/GEO/platforms/GPL2622.yaml +7 -0
  113. data/install_scripts/GEO/platforms/GPL2623.yaml +7 -0
  114. data/install_scripts/GEO/platforms/GPL2660.yaml +7 -0
  115. data/install_scripts/GEO/platforms/GPL2670.yaml +7 -0
  116. data/install_scripts/GEO/platforms/GPL2677.yaml +7 -0
  117. data/install_scripts/GEO/platforms/GPL2700.yaml +4 -0
  118. data/install_scripts/GEO/platforms/GPL2721.yaml +7 -0
  119. data/install_scripts/GEO/platforms/GPL2727.yaml +7 -0
  120. data/install_scripts/GEO/platforms/GPL273.yaml +7 -0
  121. data/install_scripts/GEO/platforms/GPL2763.yaml +7 -0
  122. data/install_scripts/GEO/platforms/GPL2824.yaml +7 -0
  123. data/install_scripts/GEO/platforms/GPL284.yaml +7 -0
  124. data/install_scripts/GEO/platforms/GPL287.yaml +4 -0
  125. data/install_scripts/GEO/platforms/GPL2872.yaml +7 -0
  126. data/install_scripts/GEO/platforms/GPL288.yaml +4 -0
  127. data/install_scripts/GEO/platforms/GPL2883.yaml +7 -0
  128. data/install_scripts/GEO/platforms/GPL289.yaml +4 -0
  129. data/install_scripts/GEO/platforms/GPL2895.yaml +4 -0
  130. data/install_scripts/GEO/platforms/GPL2897.yaml +7 -0
  131. data/install_scripts/GEO/platforms/GPL2902.yaml +7 -0
  132. data/install_scripts/GEO/platforms/GPL2987.yaml +4 -0
  133. data/install_scripts/GEO/platforms/GPL2995.yaml +7 -0
  134. data/install_scripts/GEO/platforms/GPL3039.yaml +4 -0
  135. data/install_scripts/GEO/platforms/GPL3050.yaml +7 -0
  136. data/install_scripts/GEO/platforms/GPL3084.yaml +7 -0
  137. data/install_scripts/GEO/platforms/GPL3113.yaml +7 -0
  138. data/install_scripts/GEO/platforms/GPL317.yaml +7 -0
  139. data/install_scripts/GEO/platforms/GPL319.yaml +7 -0
  140. data/install_scripts/GEO/platforms/GPL32.yaml +4 -0
  141. data/install_scripts/GEO/platforms/GPL3222.yaml +7 -0
  142. data/install_scripts/GEO/platforms/GPL3295.yaml +7 -0
  143. data/install_scripts/GEO/platforms/GPL3305.yaml +4 -0
  144. data/install_scripts/GEO/platforms/GPL3306.yaml +7 -0
  145. data/install_scripts/GEO/platforms/GPL3307.yaml +7 -0
  146. data/install_scripts/GEO/platforms/GPL333.yaml +4 -0
  147. data/install_scripts/GEO/platforms/GPL3341.yaml +7 -0
  148. data/install_scripts/GEO/platforms/GPL3349.yaml +7 -0
  149. data/install_scripts/GEO/platforms/GPL339.yaml +4 -0
  150. data/install_scripts/GEO/platforms/GPL340.yaml +4 -0
  151. data/install_scripts/GEO/platforms/GPL3408.yaml +7 -0
  152. data/install_scripts/GEO/platforms/GPL341.yaml +4 -0
  153. data/install_scripts/GEO/platforms/GPL3415.yaml +4 -0
  154. data/install_scripts/GEO/platforms/GPL3423.yaml +7 -0
  155. data/install_scripts/GEO/platforms/GPL3440.yaml +7 -0
  156. data/install_scripts/GEO/platforms/GPL3457.yaml +4 -0
  157. data/install_scripts/GEO/platforms/GPL3504.yaml +4 -0
  158. data/install_scripts/GEO/platforms/GPL3506.yaml +4 -0
  159. data/install_scripts/GEO/platforms/GPL355.yaml +7 -0
  160. data/install_scripts/GEO/platforms/GPL3558.yaml +7 -0
  161. data/install_scripts/GEO/platforms/GPL3607.yaml +7 -0
  162. data/install_scripts/GEO/platforms/GPL368.yaml +4 -0
  163. data/install_scripts/GEO/platforms/GPL3695.yaml +7 -0
  164. data/install_scripts/GEO/platforms/GPL371.yaml +7 -0
  165. data/install_scripts/GEO/platforms/GPL3834.yaml +4 -0
  166. data/install_scripts/GEO/platforms/GPL4006.yaml +7 -0
  167. data/install_scripts/GEO/platforms/GPL4055.yaml +7 -0
  168. data/install_scripts/GEO/platforms/GPL409.yaml +7 -0
  169. data/install_scripts/GEO/platforms/GPL4191.yaml +7 -0
  170. data/install_scripts/GEO/platforms/GPL4226.yaml +7 -0
  171. data/install_scripts/GEO/platforms/GPL4371.yaml +7 -0
  172. data/install_scripts/GEO/platforms/GPL4567.yaml +4 -0
  173. data/install_scripts/GEO/platforms/GPL4685.yaml +4 -0
  174. data/install_scripts/GEO/platforms/GPL483.yaml +7 -0
  175. data/install_scripts/GEO/platforms/GPL49.yaml +7 -0
  176. data/install_scripts/GEO/platforms/GPL50.yaml +7 -0
  177. data/install_scripts/GEO/platforms/GPL500.yaml +7 -0
  178. data/install_scripts/GEO/platforms/GPL507.yaml +4 -0
  179. data/install_scripts/GEO/platforms/GPL51.yaml +7 -0
  180. data/install_scripts/GEO/platforms/GPL513.yaml +7 -0
  181. data/install_scripts/GEO/platforms/GPL519.yaml +7 -0
  182. data/install_scripts/GEO/platforms/GPL52.yaml +7 -0
  183. data/install_scripts/GEO/platforms/GPL529.yaml +7 -0
  184. data/install_scripts/GEO/platforms/GPL53.yaml +7 -0
  185. data/install_scripts/GEO/platforms/GPL5356.yaml +7 -0
  186. data/install_scripts/GEO/platforms/GPL538.yaml +7 -0
  187. data/install_scripts/GEO/platforms/GPL54.yaml +7 -0
  188. data/install_scripts/GEO/platforms/GPL543.yaml +7 -0
  189. data/install_scripts/GEO/platforms/GPL544.yaml +7 -0
  190. data/install_scripts/GEO/platforms/GPL545.yaml +7 -0
  191. data/install_scripts/GEO/platforms/GPL546.yaml +7 -0
  192. data/install_scripts/GEO/platforms/GPL547.yaml +7 -0
  193. data/install_scripts/GEO/platforms/GPL549.yaml +7 -0
  194. data/install_scripts/GEO/platforms/GPL550.yaml +4 -0
  195. data/install_scripts/GEO/platforms/GPL56.yaml +7 -0
  196. data/install_scripts/GEO/platforms/GPL560.yaml +4 -0
  197. data/install_scripts/GEO/platforms/GPL564.yaml +7 -0
  198. data/install_scripts/GEO/platforms/GPL57.yaml +7 -0
  199. data/install_scripts/GEO/platforms/GPL570.yaml +4 -0
  200. data/install_scripts/GEO/platforms/GPL571.yaml +4 -0
  201. data/install_scripts/GEO/platforms/GPL576.yaml +7 -0
  202. data/install_scripts/GEO/platforms/GPL58.yaml +7 -0
  203. data/install_scripts/GEO/platforms/GPL5823.yaml +4 -0
  204. data/install_scripts/GEO/platforms/GPL59.yaml +7 -0
  205. data/install_scripts/GEO/platforms/GPL5915.yaml +4 -0
  206. data/install_scripts/GEO/platforms/GPL5947.yaml +7 -0
  207. data/install_scripts/GEO/platforms/GPL61.yaml +7 -0
  208. data/install_scripts/GEO/platforms/GPL64.yaml +7 -0
  209. data/install_scripts/GEO/platforms/GPL6419.yaml +7 -0
  210. data/install_scripts/GEO/platforms/GPL6424.yaml +7 -0
  211. data/install_scripts/GEO/platforms/GPL65.yaml +7 -0
  212. data/install_scripts/GEO/platforms/GPL6574.yaml +4 -0
  213. data/install_scripts/GEO/platforms/GPL6649.yaml +4 -0
  214. data/install_scripts/GEO/platforms/GPL67.yaml +7 -0
  215. data/install_scripts/GEO/platforms/GPL6720.yaml +7 -0
  216. data/install_scripts/GEO/platforms/GPL7054.yaml +4 -0
  217. data/install_scripts/GEO/platforms/GPL737.yaml +7 -0
  218. data/install_scripts/GEO/platforms/GPL738.yaml +7 -0
  219. data/install_scripts/GEO/platforms/GPL74.yaml +4 -0
  220. data/install_scripts/GEO/platforms/GPL75.yaml +4 -0
  221. data/install_scripts/GEO/platforms/GPL76.yaml +4 -0
  222. data/install_scripts/GEO/platforms/GPL764.yaml +7 -0
  223. data/install_scripts/GEO/platforms/GPL772.yaml +7 -0
  224. data/install_scripts/GEO/platforms/GPL782.yaml +7 -0
  225. data/install_scripts/GEO/platforms/GPL783.yaml +7 -0
  226. data/install_scripts/GEO/platforms/GPL784.yaml +7 -0
  227. data/install_scripts/GEO/platforms/GPL80.yaml +4 -0
  228. data/install_scripts/GEO/platforms/GPL81.yaml +4 -0
  229. data/install_scripts/GEO/platforms/GPL82.yaml +4 -0
  230. data/install_scripts/GEO/platforms/GPL83.yaml +4 -0
  231. data/install_scripts/GEO/platforms/GPL85.yaml +4 -0
  232. data/install_scripts/GEO/platforms/GPL86.yaml +4 -0
  233. data/install_scripts/GEO/platforms/GPL87.yaml +4 -0
  234. data/install_scripts/GEO/platforms/GPL870.yaml +7 -0
  235. data/install_scripts/GEO/platforms/GPL875.yaml +7 -0
  236. data/install_scripts/GEO/platforms/GPL884.yaml +7 -0
  237. data/install_scripts/GEO/platforms/GPL887.yaml +7 -0
  238. data/install_scripts/GEO/platforms/GPL89.yaml +4 -0
  239. data/install_scripts/GEO/platforms/GPL890.yaml +7 -0
  240. data/install_scripts/GEO/platforms/GPL891.yaml +7 -0
  241. data/install_scripts/GEO/platforms/GPL90.yaml +7 -0
  242. data/install_scripts/GEO/platforms/GPL91.yaml +4 -0
  243. data/install_scripts/GEO/platforms/GPL92.yaml +4 -0
  244. data/install_scripts/GEO/platforms/GPL920.yaml +7 -0
  245. data/install_scripts/GEO/platforms/GPL922.yaml +7 -0
  246. data/install_scripts/GEO/platforms/GPL924.yaml +7 -0
  247. data/install_scripts/GEO/platforms/GPL93.yaml +4 -0
  248. data/install_scripts/GEO/platforms/GPL96.yaml +4 -0
  249. data/install_scripts/GEO/platforms/GPL968.yaml +4 -0
  250. data/install_scripts/GEO/platforms/GPL97.yaml +4 -0
  251. data/install_scripts/GEO/platforms/GPL98.yaml +7 -0
  252. data/install_scripts/GEO/platforms/GPL981.yaml +7 -0
  253. data/install_scripts/GEO/platforms/GPL99.yaml +7 -0
  254. data/install_scripts/GEO/platforms/GPL999.yaml +7 -0
  255. data/install_scripts/GEO/series/GSE10018.yaml +61 -0
  256. data/install_scripts/GEO/series/GSE1002.yaml +135 -0
  257. data/install_scripts/GEO/series/GSE10066.yaml +31 -0
  258. data/install_scripts/GEO/series/GSE10073.yaml +19 -0
  259. data/install_scripts/GEO/series/GSE10091.yaml +15 -0
  260. data/install_scripts/GEO/series/GSE101.yaml +17 -0
  261. data/install_scripts/GEO/series/GSE10100.yaml +15 -0
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  267. data/install_scripts/GEO/series/GSE103.yaml +19 -0
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  270. data/install_scripts/GEO/series/GSE10521.yaml +56 -0
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  272. data/install_scripts/GEO/series/GSE1073.yaml +127 -0
  273. data/install_scripts/GEO/series/GSE10860.yaml +25 -0
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  300. data/install_scripts/GEO/series/GSE12104.yaml +10 -0
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  302. data/install_scripts/GEO/series/GSE12150.yaml +32 -0
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  305. data/install_scripts/GEO/series/GSE1365.yaml +14 -0
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  307. data/install_scripts/GEO/series/GSE1492.yaml +15 -0
  308. data/install_scripts/GEO/series/GSE15222.yaml +731 -0
  309. data/install_scripts/GEO/series/GSE1553.yaml +23 -0
  310. data/install_scripts/GEO/series/GSE1617.yaml +39 -0
  311. data/install_scripts/GEO/series/GSE1688.yaml +36 -0
  312. data/install_scripts/GEO/series/GSE1693.yaml +60 -0
  313. data/install_scripts/GEO/series/GSE1752.yaml +32 -0
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@@ -0,0 +1,37 @@
1
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
2
+ <html lang='en' xml:lang='en' xmlns='http://www.w3.org/1999/xhtml'>
3
+ <head>
4
+ <title>Documentation</title>
5
+ <meta content='text/html;charset=UTF-8' http-equiv='content-type' />
6
+ <meta content='all' name='robots' />
7
+ <meta content='text/html;charset=utf-8' http-equiv='content-type' />
8
+ <meta content='no' http-equiv='msthemecompatible' />
9
+ <meta content='false' http-equiv='imagetoolbar' />
10
+ <link href="generators/template/merb/merb.css" media="screen" rel="stylesheet" type="text/css" />
11
+ </head>
12
+ <body>
13
+ <div id='content'>
14
+ <div class='wrap_to_center'>
15
+ <div class='full_width' id='content_top'>
16
+ <div id='content_bottom'>
17
+ <div id='content_full'>
18
+ <h1>Documentation</h1>
19
+ <ul>
20
+ <% @directories.each do |directory| %>
21
+ <li id="merb-core"><a href="<%= directory %>/index.html"><%= directory.capitalize %></a></li>
22
+ <% end %>
23
+ </ul>
24
+ </div>
25
+ </div>
26
+ </div>
27
+ </div>
28
+ <div id='footer'>
29
+ <div class='wrap_to_center'>
30
+ <p>
31
+ &copy; 2008, Ezra Zygmuntowicz | Merb is released under the <a href="http://www.opensource.org/licenses/mit-license.php">MIT License</a>
32
+ </p>
33
+ </div>
34
+ </div>
35
+ </div>
36
+ </body>
37
+ </html>
data/merb/doc/rdoc/generators/template/merb/merb.css ADDED
@@ -0,0 +1,252 @@
1
+ html, body, div, span, applet, object, iframe,h1, h2, h3, h4, h5, h6, p, blockquote, pre,a, abbr, acronym, address, big, cite, code,del, dfn, em, font, img, ins, kbd, q, s, samp,small, strike, strong, sub, sup, tt, var,dl, dt, dd, ol, ul, li,fieldset, form, label, legend,table, caption, tbody, tfoot, thead, tr, th, td {
2
+ margin: 0;
3
+ padding: 0;
4
+ border: 0;
5
+ font-weight: inherit;
6
+ font-style: inherit;
7
+ font-size: 100%;
8
+ font-family: inherit;
9
+ vertical-align: baseline; }
10
+
11
+ /* GENERAL RULES */
12
+
13
+ body {
14
+ background: #000 url(../img/body.gif) repeat-x bottom center;
15
+ color: #000;
16
+ font: normal 12px "Lucida Grande", "Arial", sans-serif;
17
+ line-height: 1;
18
+ }
19
+ ul {list-style-type: none;}
20
+ #content_full ul.revisions{list-style-type: disc;}
21
+ #content_full ul.revisions li{margin-left: 15px;padding: 3px 0;}
22
+ li a {display: block;}
23
+ #content_full ul.revisions li a{display: inline;}
24
+ strong {font-weight: bold;}
25
+ table {border-collapse: separate;border-spacing: 0; }
26
+ caption, th, td {text-align: left;font-weight: normal; }
27
+ .invisible {display: none;}
28
+ .full_width {width:100%;}
29
+
30
+ /* LAYOUT */
31
+
32
+ .wrap_to_center, #foot {
33
+ margin: 0 auto;
34
+ display: block;
35
+ width: 800px;
36
+ }
37
+
38
+ #content {width: 100%;}
39
+
40
+ #content_top {
41
+ background: #fff url(../img/content_top.gif) no-repeat top center;
42
+ float:left;
43
+ margin:25px 0px;
44
+ width:100%;
45
+ }
46
+ #content_bottom {
47
+ background: url(../img/content_bottom.gif) no-repeat bottom center;
48
+ width:100%;
49
+ float:left;
50
+ }
51
+ #content_main {
52
+ float:left;
53
+ margin: 10px 20px 20px 20px;
54
+ width:506px;
55
+ }
56
+ #content p {
57
+ line-height:17px;
58
+ }
59
+ #content_full {margin: 10px 20px 20px 20px;}
60
+
61
+ /* HEADER & NAVIGATION */
62
+
63
+ #header {
64
+ background: #1db900 url(../img/header_waves.gif) repeat-x top center;
65
+ height:74px;
66
+ width: 100%;
67
+ }
68
+ #waves {
69
+ background: url(../img/header_waves.gif)no-repeat top left;
70
+ height:74px;
71
+ width:980px;
72
+ }
73
+ #header img {margin-top:8px; float:left;}
74
+ #header a {color:#fff; text-decoration:none;}
75
+ #header a:hover {color:#000;}
76
+ ul#nav {float:right;display:block;width:43.3em;margin-top:25px;}
77
+ ul#nav li {display:block;float:left;}
78
+ ul#nav li a {display:block;float:left;margin:0px 5px;padding:6px 9px 31px 9px;}
79
+ ul#nav li a:hover {background:url(../img/header_hover.gif) repeat-x bottom center;}
80
+ ul#nav li a#active {background:url(../img/header_arrow.gif)no-repeat bottom center;}
81
+ ul#nav li.last a {margin-right:0;}
82
+
83
+ /* TEXT FORMATTING */
84
+
85
+ h1 {
86
+ border-bottom:2px solid #ccc;
87
+ color:#000;
88
+ font:bold 28px "Arial" sans-serif;
89
+ letter-spacing:1px;
90
+ margin:20px 0px;
91
+ text-align:left;
92
+ width:100%;
93
+ }
94
+ h1.home {
95
+ border:0;
96
+ color:#fff;
97
+ font-size:36px;
98
+ margin:20px 0px;
99
+ text-align:center;
100
+ }
101
+ h2 {
102
+ color:#7aad00;
103
+ font:bold 22px "Lucida Grande" sans-serif;
104
+ margin:10px 0px;
105
+ }
106
+ h3 {
107
+ font:bold 16px "Lucida Grande";
108
+ margin:10px 0px;
109
+ }
110
+ #content a {color:#d7ff00;}
111
+ #content a:hover {background:#d7ff00;color:#000;}
112
+ #content_main ul {margin:10px 0px;}
113
+ #content_main ul li {
114
+ background: url(../img/li.gif) no-repeat left center;
115
+ padding: 4px 4px 4px 16px;
116
+ font-weight:bold;
117
+ }
118
+ p {margin-bottom:12px;}
119
+ #content_main a,#content_full a {color:#11b716;font-weight:bold;}
120
+ #content_main a:hover,#content_full a:hover {background:#22d716;}
121
+ pre {
122
+ background:#222;
123
+ color:#fff;
124
+ font:12px "Courier" serif;
125
+ line-height:18px;
126
+ padding: 12px;
127
+ margin-bottom: 10px;
128
+ }
129
+ code {
130
+ font:bold 12px "Courier" serif;
131
+ }
132
+ pre code {font-weight:normal;}
133
+
134
+ /* SIDEBAR FOR CONTENT */
135
+
136
+ #content_sidebar {
137
+ float: left;
138
+ margin: 20px 20px 15px 10px;
139
+ width: 224px;
140
+ }
141
+ .sidebar_top {
142
+ background:#868686 url(../img/sidebar_top.gif) no-repeat top center;
143
+ margin-bottom:12px;
144
+ width:224px;
145
+ }
146
+ dl.sidebar_bottom {
147
+ background: url(../img/sidebar_bottom.gif) no-repeat bottom center;
148
+ padding:12px;
149
+ }
150
+ dl.sidebar_bottom dt {
151
+ color:#fff;
152
+ font:bold 14px "Lucida Grande" sans-serif;
153
+ margin-bottom:6px;
154
+ }
155
+ dl.sidebar_bottom dd {padding:3px 0px;}
156
+ #content_sidebar p {padding:10px 0px;}
157
+ p#rss a {
158
+ background: url(../img/rss.gif) no-repeat left center;
159
+ color:#000;
160
+ font:bold 14px "Lucida Grande";
161
+ padding: 8px 6px 8px 34px;
162
+ text-decoration:none;
163
+ }
164
+ p#rss a:hover {
165
+ background: url(../img/rss.gif) no-repeat left center;
166
+ background-color:#fff;
167
+ text-decoration:underline;
168
+ }
169
+
170
+ /* FOOTER */
171
+
172
+ #footer {background:#444; clear:both;}
173
+ #footer p {padding:12px; color:#999; margin:0; text-align:center;}
174
+
175
+ /* FEATURES PAGE */
176
+ .feature {
177
+ background-repeat:no-repeat;
178
+ background-position:top left;
179
+ border-bottom:2px solid #ccc;
180
+ padding-left:150px;
181
+ }
182
+ div#speed {background-image: url(../img/feature_speed.gif);}
183
+ div#light {background-image: url(../img/feature_light.gif);}
184
+ div#power {background-image: url(../img/feature_power.gif);}
185
+
186
+ .quicklinks_top {
187
+ background:#868686 url(../img/quicklinks_top.gif) no-repeat top center;
188
+ float:right;
189
+ margin-bottom:12px;
190
+ width:169px;
191
+ }
192
+ ul.quicklinks_bottom {
193
+ background: url(../img/quicklinks_bottom.gif) no-repeat bottom center;
194
+ padding:12px;
195
+ }
196
+ ul.quicklinks_bottom li {
197
+ display:block;
198
+ padding:3px 0px;
199
+ }
200
+ #content_full ul.quicklinks_bottom li a{
201
+ color:#d7ff00;
202
+ display:inline;
203
+ }
204
+ #content_full ul.quicklinks_bottom li a:hover {
205
+ background:#d7ff00;
206
+ color:#000;
207
+ }
208
+
209
+ /* DOCUMENTATION PAGE */
210
+ .sub-framework {
211
+ border-bottom:2px solid #ccc;
212
+ margin-bottom: 20px;
213
+ padding-bottom: 10px;
214
+ }
215
+
216
+
217
+ /* ICONS FOR HOMEPAGE */
218
+
219
+ #icons_top {
220
+ background: url(../img/icons_top.gif) no-repeat top center;
221
+ float:left;
222
+ width:800px;
223
+ }
224
+ #icons_bottom {
225
+ background: url(../img/icons_bottom.gif) no-repeat bottom center;
226
+ float:left;
227
+ width:800px;
228
+ }
229
+ #icons_top dl {
230
+ color:#fff;
231
+ float:left;
232
+ width: 224px;
233
+ padding: 15px 20px;
234
+ }
235
+ #icons_top dt {
236
+ background-repeat:no-repeat;
237
+ background-position:center 2.5em;
238
+ color:#35d726;
239
+ font:bold 18px 'Lucida Grande' sans-serif;
240
+ padding: 6px 6px 150px 6px;
241
+ text-align:center;
242
+ }
243
+ #icons_top dd {
244
+ font: 11px "Lucida Grande";
245
+ line-height:18px;
246
+ text-align:center;
247
+ }
248
+ dl#speed, dl#light {border-right:1px solid #444;}
249
+ dl#light, dl#power {border-left:1px solid #000;}
250
+ dl#speed dt {background-image: url(../img/icon_speed.gif);}
251
+ dl#light dt {background-image: url(../img/icon_light.gif);}
252
+ dl#power dt {background-image: url(../img/icon_power.gif);}
data/merb/doc/rdoc/generators/template/merb/merb.rb ADDED
@@ -0,0 +1,351 @@
1
+ module RDoc
2
+ module Page
3
+
4
+ STYLE = File.read(File.join(File.dirname(__FILE__), 'merb_doc_styles.css'))
5
+ FONTS = ""
6
+
7
+ ###################################################################
8
+
9
+ CLASS_PAGE = <<HTML
10
+ <div id="%class_seq%">
11
+ <div class='banner'>
12
+ <span class="file-title-prefix">%classmod%</span><br />%full_name%<br/>
13
+ In:
14
+ START:infiles
15
+ <a href="#" onclick="jsHref('%full_path_url%');">%full_path%</a>
16
+ IF:cvsurl
17
+ &nbsp;(<a href="#" onclick="jsHref('%cvsurl%');">CVS</a>)
18
+ ENDIF:cvsurl
19
+ END:infiles
20
+
21
+ IF:parent
22
+ Parent:&nbsp;
23
+ IF:par_url
24
+ <a href="#" onclick="jsHref('%par_url%');">
25
+ ENDIF:par_url
26
+ %parent%
27
+ IF:par_url
28
+ </a>
29
+ ENDIF:par_url
30
+ ENDIF:parent
31
+ </div>
32
+ HTML
33
+
34
+ ###################################################################
35
+
36
+ METHOD_LIST = <<HTML
37
+ <div id="content">
38
+ IF:diagram
39
+ <table cellpadding='0' cellspacing='0' border='0' width="100%"><tr><td align="center">
40
+ %diagram%
41
+ </td></tr></table>
42
+ ENDIF:diagram
43
+
44
+ IF:description
45
+ <div class="description">%description%</div>
46
+ ENDIF:description
47
+
48
+ IF:requires
49
+ <div class="sectiontitle">Required Files</div>
50
+ <ul>
51
+ START:requires
52
+ <li><a href="#" onclick="jsHref('%href%');">%name%</a></li>
53
+ END:requires
54
+ </ul>
55
+ ENDIF:requires
56
+
57
+ IF:toc
58
+ <div class="sectiontitle">Contents</div>
59
+ <ul>
60
+ START:toc
61
+ <li><a href="#" onclick="jsHref('%href%');">%secname%</a></li>
62
+ END:toc
63
+ </ul>
64
+ ENDIF:toc
65
+
66
+ IF:methods
67
+ <div class="sectiontitle">Methods</div>
68
+ <ul>
69
+ START:methods
70
+ <li><a href="index.html?a=%href%&name=%name%" >%name%</a></li>
71
+ END:methods
72
+ </ul>
73
+ ENDIF:methods
74
+
75
+ IF:includes
76
+ <div class="sectiontitle">Included Modules</div>
77
+ <ul>
78
+ START:includes
79
+ <li><a href="#" onclick="jsHref('%href%');">%name%</a></li>
80
+ END:includes
81
+ </ul>
82
+ ENDIF:includes
83
+
84
+ START:sections
85
+ IF:sectitle
86
+ <div class="sectiontitle"><a href="%secsequence%">%sectitle%</a></div>
87
+ IF:seccomment
88
+ <div class="description">
89
+ %seccomment%
90
+ </div>
91
+ ENDIF:seccomment
92
+ ENDIF:sectitle
93
+
94
+ IF:classlist
95
+ <div class="sectiontitle">Classes and Modules</div>
96
+ %classlist%
97
+ ENDIF:classlist
98
+
99
+ IF:constants
100
+ <div class="sectiontitle">Constants</div>
101
+ <table border='0' cellpadding='5'>
102
+ START:constants
103
+ <tr valign='top'>
104
+ <td class="attr-name">%name%</td>
105
+ <td>=</td>
106
+ <td class="attr-value">%value%</td>
107
+ </tr>
108
+ IF:desc
109
+ <tr valign='top'>
110
+ <td>&nbsp;</td>
111
+ <td colspan="2" class="attr-desc">%desc%</td>
112
+ </tr>
113
+ ENDIF:desc
114
+ END:constants
115
+ </table>
116
+ ENDIF:constants
117
+
118
+ IF:attributes
119
+ <div class="sectiontitle">Attributes</div>
120
+ <table border='0' cellpadding='5'>
121
+ START:attributes
122
+ <tr valign='top'>
123
+ <td class='attr-rw'>
124
+ IF:rw
125
+ [%rw%]
126
+ ENDIF:rw
127
+ </td>
128
+ <td class='attr-name'>%name%</td>
129
+ <td class='attr-desc'>%a_desc%</td>
130
+ </tr>
131
+ END:attributes
132
+ </table>
133
+ ENDIF:attributes
134
+
135
+ IF:method_list
136
+ START:method_list
137
+ IF:methods
138
+ <div class="sectiontitle">%type% %category% methods</div>
139
+ START:methods
140
+ <div id="%m_seq%" class="method">
141
+ <div id="%m_seq%_title" class="title">
142
+ IF:callseq
143
+ <b>%callseq%</b>
144
+ ENDIF:callseq
145
+ IFNOT:callseq
146
+ <b>%name%</b>%params%
147
+ ENDIF:callseq
148
+ IF:codeurl
149
+ [ <a href="javascript:openCode('%codeurl%')">source</a> ]
150
+ ENDIF:codeurl
151
+ </div>
152
+ IF:m_desc
153
+ <div class="description">
154
+ %m_desc%
155
+ </div>
156
+ ENDIF:m_desc
157
+ IF:aka
158
+ <div class="aka">
159
+ This method is also aliased as
160
+ START:aka
161
+ <a href="index.html?a=%aref%&name=%name%">%name%</a>
162
+ END:aka
163
+ </div>
164
+ ENDIF:aka
165
+ IF:sourcecode
166
+ <div class="sourcecode">
167
+ <p class="source-link">[ <a href="javascript:toggleSource('%aref%_source')" id="l_%aref%_source">show source</a> ]</p>
168
+ <div id="%aref%_source" class="dyn-source">
169
+ <pre>
170
+ %sourcecode%
171
+ </pre>
172
+ </div>
173
+ </div>
174
+ ENDIF:sourcecode
175
+ </div>
176
+ END:methods
177
+ ENDIF:methods
178
+ END:method_list
179
+ ENDIF:method_list
180
+ END:sections
181
+ </div>
182
+ HTML
183
+
184
+
185
+
186
+
187
+ BODY = <<ENDBODY
188
+ !INCLUDE! <!-- banner header -->
189
+
190
+ <div id="bodyContent" >
191
+ #{METHOD_LIST}
192
+ </div>
193
+
194
+ ENDBODY
195
+
196
+
197
+
198
+ SRC_BODY = <<ENDSRCBODY
199
+ !INCLUDE! <!-- banner header -->
200
+
201
+ <div id="bodyContent" >
202
+ <h2>Source Code</h2>
203
+ <pre>%file_source_code%</pre>
204
+ </div>
205
+ ENDSRCBODY
206
+
207
+
208
+ ###################### File Page ##########################
209
+ FILE_PAGE = <<HTML
210
+ <div id="fileHeader">
211
+ <h1>%short_name%</h1>
212
+ <table class="header-table">
213
+ <tr class="top-aligned-row">
214
+ <td><strong>Path:</strong></td>
215
+ <td>%full_path%
216
+ IF:cvsurl
217
+ &nbsp;(<a href="%cvsurl%"><acronym title="Concurrent Versioning System">CVS</acronym></a>)
218
+ ENDIF:cvsurl
219
+ </td>
220
+ </tr>
221
+ <tr class="top-aligned-row">
222
+ <td><strong>Last Update:</strong></td>
223
+ <td>%dtm_modified%</td>
224
+ </tr>
225
+ </table>
226
+ </div>
227
+ HTML
228
+
229
+
230
+ #### This is not used but kept for historical purposes
231
+ ########################## Source code ##########################
232
+ # Separate page onlye
233
+
234
+ SRC_PAGE = <<HTML
235
+ <html>
236
+ <head><title>%title%</title>
237
+ <meta http-equiv="Content-Type" content="text/html; charset=%charset%">
238
+ <style>
239
+ .ruby-comment { color: green; font-style: italic }
240
+ .ruby-constant { color: #4433aa; font-weight: bold; }
241
+ .ruby-identifier { color: #222222; }
242
+ .ruby-ivar { color: #2233dd; }
243
+ .ruby-keyword { color: #3333FF; font-weight: bold }
244
+ .ruby-node { color: #777777; }
245
+ .ruby-operator { color: #111111; }
246
+ .ruby-regexp { color: #662222; }
247
+ .ruby-value { color: #662222; font-style: italic }
248
+ .kw { color: #3333FF; font-weight: bold }
249
+ .cmt { color: green; font-style: italic }
250
+ .str { color: #662222; font-style: italic }
251
+ .re { color: #662222; }
252
+ </style>
253
+ </head>
254
+ <body bgcolor="white">
255
+ <pre>%code%</pre>
256
+ </body>
257
+ </html>
258
+ HTML
259
+
260
+ ########################### source page body ###################
261
+
262
+ SCR_CODE_BODY = <<HTML
263
+ <div id="source">
264
+ %source_code%
265
+ </div>
266
+
267
+ HTML
268
+
269
+ ########################## Index ################################
270
+
271
+ FR_INDEX_BODY = <<HTML
272
+ !INCLUDE!
273
+ HTML
274
+
275
+ FILE_INDEX = <<HTML
276
+ <ul>
277
+ START:entries
278
+ <li><a id="%seq_id%_link" href="index.html?a=%seq_id%&name=%name%" onclick="loadIndexContent('%href%','%seq_id%','%name%', '%scope%');">%name%</a><small>%scope%</small></li>
279
+ END:entries
280
+ </ul>
281
+ HTML
282
+
283
+ CLASS_INDEX = FILE_INDEX
284
+ METHOD_INDEX = FILE_INDEX
285
+
286
+ INDEX = <<HTML
287
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
288
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
289
+
290
+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
291
+ <head>
292
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8"/>
293
+ <meta name="description" content="A nifty way to interact with the Merb API" />
294
+ <meta name="author" content="created by Brian Chamberlain. You can contact me using 'blchamberlain' on the gmail." />
295
+ <meta name="keywords" content="merb, ruby, purple, monkey, dishwasher" />
296
+ <title>Merb | %title% API Documentation</title>
297
+ <link rel="stylesheet" href="http://merbivore.com/documentation/stylesheet.css" type="text/css" media="screen" />
298
+ <script type="text/javascript" src="http://merbivore.com/documentation/prototype.js" ></script>
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+ <script type="text/javascript" src="http://merbivore.com/documentation/api_grease.js" ></script>
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+ </head>
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+ <body onload="setupPage();">
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+ <ul id="groupType">
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+ <li>methods</li>
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+ <li>classes</li>
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+ <li>files</li>
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+ <li id="loadingStatus" style="display:none;"> loading...</li>
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+ </ul>
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+ <div id="listFrame">
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+ <div id="listSearch">
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+ <form id="searchForm" method="get" action="#" onsubmit="return false">
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+ <input type="text" name="searchText" id="searchTextField" size="30" autocomplete="off" />
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+ </form>
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+ </div>
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+ <div id="listScroller">
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+ Loading via ajax... this could take a sec.
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+ </div>
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+ </div>
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+ <div id="browserBar">
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+ &nbsp;&nbsp;&nbsp;<span id="browserBarInfo">%title% README</span>
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+ </div>
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+ <div id="rdocContent">
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+ %content%
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+ </div>
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+ <div id="floater">
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+ <strong>Documentation for %title% </strong><a href="#" onmouseover="$('tips').show();" onmouseout="$('tips').hide();">usage tips</a>
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+ <div id="tips" style="position:absolute;width:350px;top:15px;right:20px;padding:5px;border:1px solid #333;background-color:#fafafa;display:none;">
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+ <p><strong>Some tips</strong>
328
+ <ul>
329
+ <li> Up/Down keys move through the search list</li>
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+ <li> Return/enter key loads selected item</li>
331
+ <li> Want to use this RDOC template for your own project? Check out <br /> http://rubyforge.org/projects/jaxdoc</li>
332
+ </ul>
333
+ </p>
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+ </div>
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+ <div id="blowOutListBox" style="display:none;">&nbsp;</div>
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+ <script src="http://www.google-analytics.com/urchin.js" type="text/javascript">
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+ </script>
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+ <script type="text/javascript">
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+ _uacct = "UA-3085184-1";
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+ urchinTracker();
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+ </script>
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+ </body>
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+ </html>
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+ HTML
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+
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+ API_GREASE_JS = File.read(File.join(File.dirname(__FILE__), 'api_grease.js'))
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+
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+ PROTOTYPE_JS = File.read(File.join(File.dirname(__FILE__), 'prototype.js'))
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+ end
350
+ end
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+