MARQ 0.0.1
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- data/LICENSE +20 -0
- data/R/CustomDS.R +80 -0
- data/R/GEO.R +249 -0
- data/R/MA.R +359 -0
- data/README.rdoc +29 -0
- data/bin/marq_config +170 -0
- data/install_scripts/CustomDS/Rakefile +223 -0
- data/install_scripts/GEO/Rakefile +258 -0
- data/install_scripts/GEO/platforms/GPL100.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1002.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1007.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL101.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1010.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1073.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1074.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1090.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1104.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL118.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1205.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1211.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1213.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1219.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1223.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1226.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1229.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1230.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1231.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1232.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1260.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1261.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL127.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL128.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1290.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1292.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1293.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1294.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1295.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL13.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1310.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1313.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1323.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1331.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1352.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1355.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1382.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1387.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1397.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL14.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1412.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1415.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1420.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL144.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1449.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1458.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1523.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1524.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1528.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL153.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1530.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1535.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL155.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL163.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL168.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL169.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1704.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1708.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1739.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1740.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1749.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL177.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1790.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1792.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL181.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1818.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1820.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1823.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1826.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL183.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1831.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1833.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1872.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1911.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1914.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1928.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1942.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1945.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL1964.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL198.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL1981.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL200.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2006.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL201.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2011.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2026.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL205.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL207.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2136.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL220.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL226.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL24.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL246.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL247.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2507.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2529.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2531.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL254.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2569.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL257.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2598.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL260.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2614.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2622.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2623.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2660.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2670.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2677.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2700.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2721.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2727.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL273.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2763.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2824.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL284.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL287.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2872.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL288.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2883.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL289.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2895.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2897.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2902.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL2987.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL2995.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3039.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3050.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3084.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3113.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL317.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL319.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL32.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3222.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3295.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3305.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3306.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3307.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL333.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3341.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3349.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL339.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL340.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3408.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL341.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3415.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3423.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3440.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3457.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3504.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3506.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL355.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3558.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3607.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL368.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL3695.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL371.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL3834.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL4006.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL4055.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL409.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL4191.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL4226.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL4371.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL4567.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL4685.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL483.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL49.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL50.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL500.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL507.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL51.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL513.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL519.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL52.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL529.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL53.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL5356.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL538.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL54.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL543.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL544.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL545.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL546.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL547.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL549.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL550.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL56.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL560.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL564.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL57.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL570.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL571.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL576.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL58.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL5823.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL59.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL5915.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL5947.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL61.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL64.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL6419.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL6424.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL65.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL6574.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL6649.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL67.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL6720.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL7054.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL737.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL738.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL74.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL75.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL76.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL764.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL772.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL782.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL783.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL784.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL80.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL81.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL82.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL83.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL85.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL86.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL87.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL870.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL875.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL884.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL887.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL89.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL890.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL891.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL90.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL91.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL92.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL920.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL922.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL924.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL93.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL96.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL968.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL97.yaml +4 -0
- data/install_scripts/GEO/platforms/GPL98.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL981.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL99.yaml +7 -0
- data/install_scripts/GEO/platforms/GPL999.yaml +7 -0
- data/install_scripts/GEO/series/GSE10018.yaml +61 -0
- data/install_scripts/GEO/series/GSE1002.yaml +135 -0
- data/install_scripts/GEO/series/GSE10066.yaml +31 -0
- data/install_scripts/GEO/series/GSE10073.yaml +19 -0
- data/install_scripts/GEO/series/GSE10091.yaml +15 -0
- data/install_scripts/GEO/series/GSE101.yaml +17 -0
- data/install_scripts/GEO/series/GSE10100.yaml +15 -0
- data/install_scripts/GEO/series/GSE10101.yaml +15 -0
- data/install_scripts/GEO/series/GSE10102.yaml +15 -0
- data/install_scripts/GEO/series/GSE10267.yaml +37 -0
- data/install_scripts/GEO/series/GSE10268.yaml +115 -0
- data/install_scripts/GEO/series/GSE10279.yaml +23 -0
- data/install_scripts/GEO/series/GSE103.yaml +19 -0
- data/install_scripts/GEO/series/GSE104.yaml +19 -0
- data/install_scripts/GEO/series/GSE10514.yaml +27 -0
- data/install_scripts/GEO/series/GSE10521.yaml +56 -0
- data/install_scripts/GEO/series/GSE10554.yaml +19 -0
- data/install_scripts/GEO/series/GSE1073.yaml +127 -0
- data/install_scripts/GEO/series/GSE10860.yaml +25 -0
- data/install_scripts/GEO/series/GSE10930.yaml +15 -0
- data/install_scripts/GEO/series/GSE10933.yaml +15 -0
- data/install_scripts/GEO/series/GSE10944.yaml +21 -0
- data/install_scripts/GEO/series/GSE10947.yaml +21 -0
- data/install_scripts/GEO/series/GSE10948.yaml +21 -0
- data/install_scripts/GEO/series/GSE11061.yaml +19 -0
- data/install_scripts/GEO/series/GSE11071.yaml +67 -0
- data/install_scripts/GEO/series/GSE11111.yaml +25 -0
- data/install_scripts/GEO/series/GSE11236.yaml +25 -0
- data/install_scripts/GEO/series/GSE11282.yaml +19 -0
- data/install_scripts/GEO/series/GSE11377.yaml +19 -0
- data/install_scripts/GEO/series/GSE11380.yaml +13 -0
- data/install_scripts/GEO/series/GSE11397.yaml +55 -0
- data/install_scripts/GEO/series/GSE11412.yaml +11 -0
- data/install_scripts/GEO/series/GSE11452.yaml +354 -0
- data/install_scripts/GEO/series/GSE11620.yaml +33 -0
- data/install_scripts/GEO/series/GSE11621.yaml +31 -0
- data/install_scripts/GEO/series/GSE11651.yaml +94 -0
- data/install_scripts/GEO/series/GSE11754.yaml +29 -0
- data/install_scripts/GEO/series/GSE11799.yaml +59 -0
- data/install_scripts/GEO/series/GSE11856.yaml +11 -0
- data/install_scripts/GEO/series/GSE11878.yaml +19 -0
- data/install_scripts/GEO/series/GSE11983.yaml +15 -0
- data/install_scripts/GEO/series/GSE12004.yaml +41 -0
- data/install_scripts/GEO/series/GSE12055.yaml +109 -0
- data/install_scripts/GEO/series/GSE12061.yaml +13 -0
- data/install_scripts/GEO/series/GSE12104.yaml +10 -0
- data/install_scripts/GEO/series/GSE12138.yaml +13 -0
- data/install_scripts/GEO/series/GSE12150.yaml +32 -0
- data/install_scripts/GEO/series/GSE12684.yaml +47 -0
- data/install_scripts/GEO/series/GSE12685.yaml +34 -0
- data/install_scripts/GEO/series/GSE1365.yaml +14 -0
- data/install_scripts/GEO/series/GSE1404.yaml +596 -0
- data/install_scripts/GEO/series/GSE1492.yaml +15 -0
- data/install_scripts/GEO/series/GSE15222.yaml +731 -0
- data/install_scripts/GEO/series/GSE1553.yaml +23 -0
- data/install_scripts/GEO/series/GSE1617.yaml +39 -0
- data/install_scripts/GEO/series/GSE1688.yaml +36 -0
- data/install_scripts/GEO/series/GSE1693.yaml +60 -0
- data/install_scripts/GEO/series/GSE1752.yaml +32 -0
- data/install_scripts/GEO/series/GSE1753.yaml +16 -0
- data/install_scripts/GEO/series/GSE1754.yaml +19 -0
- data/install_scripts/GEO/series/GSE1758.yaml +15 -0
- data/install_scripts/GEO/series/GSE1759.yaml +18 -0
- data/install_scripts/GEO/series/GSE1760.yaml +18 -0
- data/install_scripts/GEO/series/GSE1763.yaml +19 -0
- data/install_scripts/GEO/series/GSE1915.yaml +39 -0
- data/install_scripts/GEO/series/GSE1927.yaml +14 -0
- data/install_scripts/GEO/series/GSE1941.yaml +23 -0
- data/install_scripts/GEO/series/GSE1942.yaml +31 -0
- data/install_scripts/GEO/series/GSE1944.yaml +58 -0
- data/install_scripts/GEO/series/GSE1975.yaml +65 -0
- data/install_scripts/GEO/series/GSE20.yaml +24 -0
- data/install_scripts/GEO/series/GSE2107.yaml +14 -0
- data/install_scripts/GEO/series/GSE2159.yaml +31 -0
- data/install_scripts/GEO/series/GSE2246.yaml +157 -0
- data/install_scripts/GEO/series/GSE2263.yaml +57 -0
- data/install_scripts/GEO/series/GSE2267.yaml +155 -0
- data/install_scripts/GEO/series/GSE23.yaml +58 -0
- data/install_scripts/GEO/series/GSE2329.yaml +43 -0
- data/install_scripts/GEO/series/GSE2330.yaml +55 -0
- data/install_scripts/GEO/series/GSE2349.yaml +19 -0
- data/install_scripts/GEO/series/GSE2412.yaml +58 -0
- data/install_scripts/GEO/series/GSE2419.yaml +27 -0
- data/install_scripts/GEO/series/GSE2420.yaml +29 -0
- data/install_scripts/GEO/series/GSE2434.yaml +37 -0
- data/install_scripts/GEO/series/GSE2526.yaml +23 -0
- data/install_scripts/GEO/series/GSE2579.yaml +19 -0
- data/install_scripts/GEO/series/GSE2806.yaml +11 -0
- data/install_scripts/GEO/series/GSE2831.yaml +35 -0
- data/install_scripts/GEO/series/GSE2832.yaml +17 -0
- data/install_scripts/GEO/series/GSE29.yaml +16 -0
- data/install_scripts/GEO/series/GSE3006.yaml +35 -0
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var x1 = this.opos[0], y1 = this.opos[1], x2 = e.pageX, y2 = e.pageY;
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if (x1 > x2) { var tmp = x2; x2 = x1; x1 = tmp; }
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if (y1 > y2) { var tmp = y2; y2 = y1; y1 = tmp; }
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this.helper.css({left: x1, top: y1, width: x2-x1, height: y2-y1});
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}
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_mouseStop: function(e){
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var actual= this._percent(e.pageY);
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}else{
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var actual= this._percent(e.pageX);
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}
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var area = this._area(this._getData('start'), actual);
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if (this.lasso){
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this.helper.remove();
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}
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this._trigger('selected', e, area);
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},
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reset: function(){
|
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}else{
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this.jg = new jsGraphics(this.name);
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}
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},
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hits: function(list, options) {
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var opt = $.extend(this.options, options);
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this.list = list;
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this.reset();
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// Set main color
|
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jg.setColor(opt.color);
|
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jg.fillRect(left,top, hsize,vsize);
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if (opt.vertical){
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jg.fillRect(left,top + vsize * (1 - opt.down), hsize, vsize * opt.down);
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jg.drawLine(left, top + pos ,left + hsize - 1, top + pos );
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}else{
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|
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jg.fillRect(left,top, hsize * opt.up, vsize);
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jg.setColor(opt.down_color);
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jg.fillRect(left + hsize * ( 1 - down),top, hsize * opt.down, vsize);
|
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|
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jg.setColor(opt.hit_color);
|
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|
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$(list).each(function(){
|
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|
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|
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jg.drawLine(left + pos, top, left + pos, top + vsize - 1 );
|
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|
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})
|
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|
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|
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jg.paint();
|
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|
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}
|
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|
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|
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|
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|
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}));
|
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+
|
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|
+
$.extend($.ui.hitarea, {
|
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|
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defaults: {
|
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|
+
up_color: 'green',
|
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|
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down_color: 'red',
|
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|
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hit_color: 'black',
|
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|
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color: 'blue',
|
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|
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select_color:'#ecf169',
|
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|
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lasso: false,
|
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|
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up: 0,
|
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down: 0,
|
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|
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distance: 10,
|
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|
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delay: 1
|
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|
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}
|
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|
+
});
|
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|
+
})(jQuery)
|
168
|
+
|
@@ -0,0 +1,19 @@
|
|
1
|
+
/*
|
2
|
+
* jQuery JavaScript Library v1.3.2
|
3
|
+
* http://jquery.com/
|
4
|
+
*
|
5
|
+
* Copyright (c) 2009 John Resig
|
6
|
+
* Dual licensed under the MIT and GPL licenses.
|
7
|
+
* http://docs.jquery.com/License
|
8
|
+
*
|
9
|
+
* Date: 2009-02-19 17:34:21 -0500 (Thu, 19 Feb 2009)
|
10
|
+
* Revision: 6246
|
11
|
+
*/
|
12
|
+
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+
/*
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14
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+
* Sizzle CSS Selector Engine - v0.9.3
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+
* Copyright 2009, The Dojo Foundation
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+
* Released under the MIT, BSD, and GPL Licenses.
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17
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+
* More information: http://sizzlejs.com/
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*/
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|
@@ -0,0 +1,11 @@
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1
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/**
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2
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+
* jQuery.ScrollTo - Easy element scrolling using jQuery.
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* Copyright (c) 2007-2008 Ariel Flesler - aflesler(at)gmail(dot)com | http://flesler.blogspot.com
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* Dual licensed under MIT and GPL.
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5
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+
* Date: 9/11/2008
|
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* @author Ariel Flesler
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7
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+
* @version 1.4
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8
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+
*
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* http://flesler.blogspot.com/2007/10/jqueryscrollto.html
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10
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*/
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+
;(function(h){var m=h.scrollTo=function(b,c,g){h(window).scrollTo(b,c,g)};m.defaults={axis:'y',duration:1};m.window=function(b){return h(window).scrollable()};h.fn.scrollable=function(){return this.map(function(){var b=this.parentWindow||this.defaultView,c=this.nodeName=='#document'?b.frameElement||b:this,g=c.contentDocument||(c.contentWindow||c).document,i=c.setInterval;return c.nodeName=='IFRAME'||i&&h.browser.safari?g.body:i?g.documentElement:this})};h.fn.scrollTo=function(r,j,a){if(typeof j=='object'){a=j;j=0}if(typeof a=='function')a={onAfter:a};a=h.extend({},m.defaults,a);j=j||a.speed||a.duration;a.queue=a.queue&&a.axis.length>1;if(a.queue)j/=2;a.offset=n(a.offset);a.over=n(a.over);return this.scrollable().each(function(){var k=this,o=h(k),d=r,l,e={},p=o.is('html,body');switch(typeof d){case'number':case'string':if(/^([+-]=)?\d+(px)?$/.test(d)){d=n(d);break}d=h(d,this);case'object':if(d.is||d.style)l=(d=h(d)).offset()}h.each(a.axis.split(''),function(b,c){var g=c=='x'?'Left':'Top',i=g.toLowerCase(),f='scroll'+g,s=k[f],t=c=='x'?'Width':'Height',v=t.toLowerCase();if(l){e[f]=l[i]+(p?0:s-o.offset()[i]);if(a.margin){e[f]-=parseInt(d.css('margin'+g))||0;e[f]-=parseInt(d.css('border'+g+'Width'))||0}e[f]+=a.offset[i]||0;if(a.over[i])e[f]+=d[v]()*a.over[i]}else e[f]=d[i];if(/^\d+$/.test(e[f]))e[f]=e[f]<=0?0:Math.min(e[f],u(t));if(!b&&a.queue){if(s!=e[f])q(a.onAfterFirst);delete e[f]}});q(a.onAfter);function q(b){o.animate(e,j,a.easing,b&&function(){b.call(this,r,a)})};function u(b){var c='scroll'+b,g=k.ownerDocument;return p?Math.max(g.documentElement[c],g.body[c]):k[c]}}).end()};function n(b){return typeof b=='object'?b:{top:b,left:b}}})(jQuery);
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(function($){
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$.fn.tablescroll = function(user_options){
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var opt = $.extend($.fn.tablescroll.options, user_options);
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return this.each(function(){
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var table = $(this);
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if (table.filter('.tablesorter_avoid').length > 0){
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return true;
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}
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if (table.filter('.tablescroll_processed').length == 0){
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$.fn.tablescroll.prepare(table);
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table.addClass('tablescroll_processed');
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}
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var scroller = table.parents('.tablescroll_scroller');
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if (scroller.length > 0 && opt.vsize != null){
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if (opt.vsize == 'window'){
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var window_height = $(window).height();
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var offset = scroller.offset();
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var height = $(window).height() - scroller.offset().top - opt.windowmargin;
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if (height < parseInt(table.height())){
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scroller.css('height', height).width(table.outerWidth() + 16);
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}else{
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scroller.css('height', table.css('height')).width(table.outerWidth() + 16);
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}
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}else{
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if (opt.vsize < parseInt(table.height())){
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scroller.css('height', opt.vsize).width(table.width() + 16);
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}else{
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scroller.css('height', table.css('height'));
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}
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}
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}
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})
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}
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$.fn.tablescroll.options = {
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vsize: '',
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windowmargin: 50,
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scrollsize: '16px'
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}
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$.fn.tablescroll.tag = function(name){
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return($('<' + name + '></' + name + '>'));
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}
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$.fn.tablescroll.prepare = function(table){
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$.fn.tablescroll.prepare.div_hack(table);
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}
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$.fn.tablescroll.prepare.div_hack = function(table){
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var table_width = table.outerWidth();
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var fields = table.find('tbody > tr:nth-child(1) > td');
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// Computer percentage sizes
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var sizes = $.map(fields, function(elem, i){ return($(elem).outerWidth())});
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var total = 0;
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$(sizes).each(function(){total += this })
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sizes = $.map(sizes, function(elem, i){return( ((elem * 100)/total).toString() + '%') });
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// Separate header
|
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if (table.find('thead').length > 0){
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var header_table = tag('table');
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header_table.insertBefore(table);
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// Set same class to header_table as original table
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header_table.addClass(table.attr('class')).addClass('tablescroll_headers');
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// Relocate headers
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header_table.append(table.find('thead').remove());
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+
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// Reset table widths
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var i = 0; table.find('tbody > tr:nth-child(1) > td').each(function(){
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$(this).width(sizes[i]); i++;
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})
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// Reset header widths
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var i = 0; header_table.find('thead > tr:nth-child(1) > th').each(function(){
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$(this).width(sizes[i]); i++;
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})
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// Set ids
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if (table.attr('id') != ""){
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var id = table.attr('id');
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header_table.attr('id', id + '_headers').attr('data-content', id);
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table.attr('data-headers', id + '_headers');
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}
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header_table.addClass('tablesorter_avoid');
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header_table.width(table_width);
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// Remove space
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header_table.css('margin-bottom',0).css('padding-bottom',0);
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table.css('margin-top',0).css('padding-top',0);
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}
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// Add scroll div
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var div = tag('div').addClass('tablescroll_scroller').css('overflow-y', 'auto').css('overflow-x', 'hidden');
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table.wrap(div);
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table.addClass('tablescroll_content');
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table.width(table_width);
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table.addClass('tablescroll_processed');
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}
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$.fn.tablescroller = function(){
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var table = $(this);
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if (table.parents('.tablescroll_scroller').length > 0){
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return table.parents('.tablescroll_scroller');
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}
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if (table.find('.tablescroll_scroller').length > 0){
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return table.find('.tablescroll_scroller');
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}
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return null;
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}
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})(jQuery)
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|
@@ -0,0 +1,642 @@
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1
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/**
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* Tabs - jQuery plugin for accessible, unobtrusive tabs
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* @requires jQuery v1.1.1
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*
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* http://stilbuero.de/tabs/
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*
|
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* Copyright (c) 2006 Klaus Hartl (stilbuero.de)
|
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+
* Dual licensed under the MIT and GPL licenses:
|
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* http://www.opensource.org/licenses/mit-license.php
|
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* http://www.gnu.org/licenses/gpl.html
|
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*
|
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* Version: 2.7.4
|
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+
*/
|
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+
|
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+
(function($) { // block scope
|
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|
+
|
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$.extend({
|
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+
tabs: {
|
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|
+
remoteCount: 0 // TODO in Tabs 3 this is going to be more cleanly in one single namespace
|
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+
}
|
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+
});
|
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+
|
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/**
|
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* Create an accessible, unobtrusive tab interface based on a particular HTML structure.
|
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+
*
|
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+
* The underlying HTML has to look like this:
|
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+
*
|
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* <div id="container">
|
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* <ul>
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* <li><a href="#fragment-1">Section 1</a></li>
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* <li><a href="#fragment-2">Section 2</a></li>
|
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* <li><a href="#fragment-3">Section 3</a></li>
|
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* </ul>
|
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* <div id="fragment-1">
|
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+
*
|
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+
* </div>
|
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* <div id="fragment-2">
|
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+
*
|
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+
* </div>
|
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+
* <div id="fragment-3">
|
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+
*
|
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+
* </div>
|
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* </div>
|
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+
*
|
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+
* Each anchor in the unordered list points directly to a section below represented by one of the
|
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|
+
* divs (the URI in the anchor's href attribute refers to the fragment with the corresponding id).
|
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|
+
* Because such HTML structure is fully functional on its own, e.g. without JavaScript, the tab
|
48
|
+
* interface is accessible and unobtrusive.
|
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+
*
|
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|
+
* A tab is also bookmarkable via hash in the URL. Use the History/Remote plugin (Tabs will
|
51
|
+
* auto-detect its presence) to fix the back (and forward) button.
|
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|
+
*
|
53
|
+
* @example $('#container').tabs();
|
54
|
+
* @desc Create a basic tab interface.
|
55
|
+
* @example $('#container').tabs(2);
|
56
|
+
* @desc Create a basic tab interface with the second tab initially activated.
|
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|
+
* @example $('#container').tabs({disabled: [3, 4]});
|
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|
+
* @desc Create a tab interface with the third and fourth tab being disabled.
|
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|
+
* @example $('#container').tabs({fxSlide: true});
|
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|
+
* @desc Create a tab interface that uses slide down/up animations for showing/hiding tab
|
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|
+
* content upon tab switching.
|
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+
*
|
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+
* @param Number initial An integer specifying the position of the tab (no zero-based index) that
|
64
|
+
* gets activated at first (on page load). Two alternative ways to specify
|
65
|
+
* the active tab will overrule this argument. First a li element
|
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|
+
* (representing one single tab) belonging to the selected tab class, e.g.
|
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|
+
* set the selected tab class (default: "tabs-selected", see option
|
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|
+
* selectedClass) for one of the unordered li elements in the HTML source.
|
69
|
+
* In addition if a fragment identifier/hash in the URL of the page refers
|
70
|
+
* to the id of a tab container of a tab interface the corresponding tab will
|
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|
+
* be activated and both the initial argument as well as an eventually
|
72
|
+
* declared class attribute will be overruled. Defaults to 1 if omitted.
|
73
|
+
* @param Object settings An object literal containing key/value pairs to provide optional settings.
|
74
|
+
* @option Array<Number> disabled An array containing the position of the tabs (no zero-based index)
|
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|
+
* that should be disabled on initialization. Default value: null.
|
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|
+
* A tab can also be disabled by simply adding the disabling class
|
77
|
+
* (default: "tabs-disabled", see option disabledClass) to the li
|
78
|
+
* element representing that particular tab.
|
79
|
+
* @option Boolean bookmarkable Boolean flag indicating if support for bookmarking and history (via
|
80
|
+
* changing hash in the URL of the browser) is enabled. Default value:
|
81
|
+
* false, unless the History/Remote plugin is included. In that case the
|
82
|
+
* default value becomes true. @see $.ajaxHistory.initialize
|
83
|
+
* @option Boolean remote Boolean flag indicating that tab content has to be loaded remotely from
|
84
|
+
* the url given in the href attribute of the tab menu anchor elements.
|
85
|
+
* @option String spinner The content of this string is shown in a tab while remote content is loading.
|
86
|
+
* Insert plain text as well as an img here. To turn off this notification
|
87
|
+
* pass an empty string or null. Default: "Loading…".
|
88
|
+
* @option String hashPrefix A String that is used for constructing the hash the link's href attribute
|
89
|
+
* of a remote tab gets altered to, such as "#remote-1".
|
90
|
+
* Default value: "remote-tab-".
|
91
|
+
* @option Boolean fxFade Boolean flag indicating whether fade in/out animations are used for tab
|
92
|
+
* switching. Can be combined with fxSlide. Will overrule fxShow/fxHide.
|
93
|
+
* Default value: false.
|
94
|
+
* @option Boolean fxSlide Boolean flag indicating whether slide down/up animations are used for tab
|
95
|
+
* switching. Can be combined with fxFade. Will overrule fxShow/fxHide.
|
96
|
+
* Default value: false.
|
97
|
+
* @option String|Number fxSpeed A string representing one of the three predefined speeds ("slow",
|
98
|
+
* "normal", or "fast") or the number of milliseconds (e.g. 1000) to
|
99
|
+
* run an animation. Default value: "normal".
|
100
|
+
* @option Object fxShow An object literal of the form jQuery's animate function expects for making
|
101
|
+
* your own, custom animation to reveal a tab upon tab switch. Unlike fxFade
|
102
|
+
* or fxSlide this animation is independent from an optional hide animation.
|
103
|
+
* Default value: null. @see animate
|
104
|
+
* @option Object fxHide An object literal of the form jQuery's animate function expects for making
|
105
|
+
* your own, custom animation to hide a tab upon tab switch. Unlike fxFade
|
106
|
+
* or fxSlide this animation is independent from an optional show animation.
|
107
|
+
* Default value: null. @see animate
|
108
|
+
* @option String|Number fxShowSpeed A string representing one of the three predefined speeds
|
109
|
+
* ("slow", "normal", or "fast") or the number of milliseconds
|
110
|
+
* (e.g. 1000) to run the animation specified in fxShow.
|
111
|
+
* Default value: fxSpeed.
|
112
|
+
* @option String|Number fxHideSpeed A string representing one of the three predefined speeds
|
113
|
+
* ("slow", "normal", or "fast") or the number of milliseconds
|
114
|
+
* (e.g. 1000) to run the animation specified in fxHide.
|
115
|
+
* Default value: fxSpeed.
|
116
|
+
* @option Boolean fxAutoHeight Boolean flag that if set to true causes all tab heights
|
117
|
+
* to be constant (being the height of the tallest tab).
|
118
|
+
* Default value: false.
|
119
|
+
* @option Function onClick A function to be invoked upon tab switch, immediatly after a tab has
|
120
|
+
* been clicked, e.g. before the other's tab content gets hidden. The
|
121
|
+
* function gets passed three arguments: the first one is the clicked
|
122
|
+
* tab (e.g. an anchor element), the second one is the DOM element
|
123
|
+
* containing the content of the clicked tab (e.g. the div), the third
|
124
|
+
* argument is the one of the tab that gets hidden. If this callback
|
125
|
+
* returns false, the tab switch is canceled (use to disallow tab
|
126
|
+
* switching for the reason of a failed form validation for example).
|
127
|
+
* Default value: null.
|
128
|
+
* @option Function onHide A function to be invoked upon tab switch, immediatly after one tab's
|
129
|
+
* content got hidden (with or without an animation) and right before the
|
130
|
+
* next tab is revealed. The function gets passed three arguments: the
|
131
|
+
* first one is the clicked tab (e.g. an anchor element), the second one
|
132
|
+
* is the DOM element containing the content of the clicked tab, (e.g. the
|
133
|
+
* div), the third argument is the one of the tab that gets hidden.
|
134
|
+
* Default value: null.
|
135
|
+
* @option Function onShow A function to be invoked upon tab switch. This function is invoked
|
136
|
+
* after the new tab has been revealed, e.g. after the switch is completed.
|
137
|
+
* The function gets passed three arguments: the first one is the clicked
|
138
|
+
* tab (e.g. an anchor element), the second one is the DOM element
|
139
|
+
* containing the content of the clicked tab, (e.g. the div), the third
|
140
|
+
* argument is the one of the tab that gets hidden. Default value: null.
|
141
|
+
* @option String navClass A CSS class that is used to identify the tabs unordered list by class if
|
142
|
+
* the required HTML structure differs from the default one.
|
143
|
+
* Default value: "tabs-nav".
|
144
|
+
* @option String selectedClass The CSS class attached to the li element representing the
|
145
|
+
* currently selected (active) tab. Default value: "tabs-selected".
|
146
|
+
* @option String disabledClass The CSS class attached to the li element representing a disabled
|
147
|
+
* tab. Default value: "tabs-disabled".
|
148
|
+
* @option String containerClass A CSS class that is used to identify tab containers by class if
|
149
|
+
* the required HTML structure differs from the default one.
|
150
|
+
* Default value: "tabs-container".
|
151
|
+
* @option String hideClass The CSS class used for hiding inactive tabs. A class is used instead
|
152
|
+
* of "display: none" in the style attribute to maintain control over
|
153
|
+
* visibility in other media types than screen, most notably print.
|
154
|
+
* Default value: "tabs-hide".
|
155
|
+
* @option String loadingClass The CSS class used for indicating that an Ajax tab is currently
|
156
|
+
* loading, for example by showing a spinner.
|
157
|
+
* Default value: "tabs-loading".
|
158
|
+
* @option String tabStruct @deprecated A CSS selector or basic XPath expression reflecting a
|
159
|
+
* nested HTML structure that is different from the default single div
|
160
|
+
* structure (one div with an id inside the overall container holds one
|
161
|
+
* tab's content). If for instance an additional div is required to wrap
|
162
|
+
* up the several tab containers such a structure is expressed by "div>div".
|
163
|
+
* Default value: "div".
|
164
|
+
* @type jQuery
|
165
|
+
*
|
166
|
+
* @name tabs
|
167
|
+
* @cat Plugins/Tabs
|
168
|
+
* @author Klaus Hartl/klaus.hartl@stilbuero.de
|
169
|
+
*/
|
170
|
+
$.fn.tabs = function(initial, settings) {
|
171
|
+
|
172
|
+
// settings
|
173
|
+
if (typeof initial == 'object') settings = initial; // no initial tab given but a settings object
|
174
|
+
settings = $.extend({
|
175
|
+
initial: (initial && typeof initial == 'number' && initial > 0) ? --initial : 0,
|
176
|
+
disabled: null,
|
177
|
+
bookmarkable: $.ajaxHistory ? true : false,
|
178
|
+
remote: false,
|
179
|
+
spinner: 'Loading…',
|
180
|
+
hashPrefix: 'remote-tab-',
|
181
|
+
fxFade: null,
|
182
|
+
fxSlide: null,
|
183
|
+
fxShow: null,
|
184
|
+
fxHide: null,
|
185
|
+
fxSpeed: 'normal',
|
186
|
+
fxShowSpeed: null,
|
187
|
+
fxHideSpeed: null,
|
188
|
+
fxAutoHeight: false,
|
189
|
+
onClick: null,
|
190
|
+
onHide: null,
|
191
|
+
onShow: null,
|
192
|
+
navClass: 'tabs-nav',
|
193
|
+
selectedClass: 'tabs-selected',
|
194
|
+
disabledClass: 'tabs-disabled',
|
195
|
+
containerClass: 'tabs-container',
|
196
|
+
hideClass: 'tabs-hide',
|
197
|
+
loadingClass: 'tabs-loading',
|
198
|
+
tabStruct: 'div'
|
199
|
+
}, settings || {});
|
200
|
+
|
201
|
+
$.browser.msie6 = $.browser.msie && ($.browser.version && $.browser.version < 7 || /MSIE 6.0/.test(navigator.userAgent)); // do not check for 6.0 alone, userAgent in Windows Vista has "Windows NT 6.0"
|
202
|
+
|
203
|
+
// helper to prevent scroll to fragment
|
204
|
+
function unFocus() {
|
205
|
+
scrollTo(0, 0);
|
206
|
+
}
|
207
|
+
|
208
|
+
// initialize tabs
|
209
|
+
return this.each(function() {
|
210
|
+
|
211
|
+
// remember wrapper for later
|
212
|
+
var container = this;
|
213
|
+
|
214
|
+
// setup nav
|
215
|
+
var nav = $('ul.' + settings.navClass, container);
|
216
|
+
nav = nav.size() && nav || $('>ul:eq(0)', container); // fallback to default structure
|
217
|
+
var tabs = $('a', nav);
|
218
|
+
|
219
|
+
// prepare remote tabs
|
220
|
+
if (settings.remote) {
|
221
|
+
tabs.each(function() {
|
222
|
+
var id = settings.hashPrefix + (++$.tabs.remoteCount), hash = '#' + id, url = this.href;
|
223
|
+
this.href = hash;
|
224
|
+
$('<div id="' + id + '" class="' + settings.containerClass + '"></div>').appendTo(container);
|
225
|
+
|
226
|
+
$(this).bind('loadRemoteTab', function(e, callback) {
|
227
|
+
var $$ = $(this).addClass(settings.loadingClass), span = $('span', this)[0], tabTitle = span.innerHTML;
|
228
|
+
if (settings.spinner) {
|
229
|
+
// TODO if spinner is image
|
230
|
+
span.innerHTML = '<em>' + settings.spinner + '</em>'; // WARNING: html(...) crashes Safari with jQuery 1.1.2
|
231
|
+
}
|
232
|
+
setTimeout(function() { // Timeout is again required in IE, "wait" for id being restored
|
233
|
+
$(hash).load(url, function() {
|
234
|
+
if (settings.spinner) {
|
235
|
+
span.innerHTML = tabTitle; // WARNING: html(...) crashes Safari with jQuery 1.1.2
|
236
|
+
}
|
237
|
+
$$.removeClass(settings.loadingClass);
|
238
|
+
callback && callback();
|
239
|
+
});
|
240
|
+
}, 0);
|
241
|
+
});
|
242
|
+
|
243
|
+
});
|
244
|
+
}
|
245
|
+
|
246
|
+
// set up containers
|
247
|
+
var containers = $('div.' + settings.containerClass, container);
|
248
|
+
containers = containers.size() && containers || $('>' + settings.tabStruct, container); // fallback to default structure
|
249
|
+
|
250
|
+
// attach classes for styling if not present
|
251
|
+
nav.is('.' + settings.navClass) || nav.addClass(settings.navClass);
|
252
|
+
containers.each(function() {
|
253
|
+
var $$ = $(this);
|
254
|
+
$$.is('.' + settings.containerClass) || $$.addClass(settings.containerClass);
|
255
|
+
});
|
256
|
+
|
257
|
+
// try to retrieve active tab from class in HTML
|
258
|
+
var hasSelectedClass = $('li', nav).index( $('li.' + settings.selectedClass, nav)[0] );
|
259
|
+
if (hasSelectedClass >= 0) {
|
260
|
+
settings.initial = hasSelectedClass;
|
261
|
+
}
|
262
|
+
|
263
|
+
// try to retrieve active tab from hash in url, will override class in HTML
|
264
|
+
if (location.hash) {
|
265
|
+
tabs.each(function(i) {
|
266
|
+
if (this.hash == location.hash) {
|
267
|
+
settings.initial = i;
|
268
|
+
// prevent page scroll to fragment
|
269
|
+
if (($.browser.msie || $.browser.opera) && !settings.remote) {
|
270
|
+
var toShow = $(location.hash);
|
271
|
+
var toShowId = toShow.attr('id');
|
272
|
+
toShow.attr('id', '');
|
273
|
+
setTimeout(function() {
|
274
|
+
toShow.attr('id', toShowId); // restore id
|
275
|
+
}, 500);
|
276
|
+
}
|
277
|
+
unFocus();
|
278
|
+
return false; // break
|
279
|
+
}
|
280
|
+
});
|
281
|
+
}
|
282
|
+
if ($.browser.msie) {
|
283
|
+
unFocus(); // fix IE focussing bottom of the page for some unknown reason
|
284
|
+
}
|
285
|
+
|
286
|
+
// highlight tab accordingly
|
287
|
+
containers.filter(':eq(' + settings.initial + ')').show().end().not(':eq(' + settings.initial + ')').addClass(settings.hideClass);
|
288
|
+
$('li', nav).removeClass(settings.selectedClass).eq(settings.initial).addClass(settings.selectedClass); // we need to remove classes eventually if hash takes precedence over class
|
289
|
+
// trigger load of initial tab
|
290
|
+
tabs.eq(settings.initial).trigger('loadRemoteTab').end();
|
291
|
+
|
292
|
+
// setup auto height
|
293
|
+
if (settings.fxAutoHeight) {
|
294
|
+
// helper
|
295
|
+
var _setAutoHeight = function(reset) {
|
296
|
+
// get tab heights in top to bottom ordered array
|
297
|
+
var heights = $.map(containers.get(), function(el) {
|
298
|
+
var h, jq = $(el);
|
299
|
+
if (reset) {
|
300
|
+
if ($.browser.msie6) {
|
301
|
+
el.style.removeExpression('behaviour');
|
302
|
+
el.style.height = '';
|
303
|
+
el.minHeight = null;
|
304
|
+
}
|
305
|
+
h = jq.css({'min-height': ''}).height(); // use jQuery's height() to get hidden element values
|
306
|
+
} else {
|
307
|
+
h = jq.height(); // use jQuery's height() to get hidden element values
|
308
|
+
}
|
309
|
+
return h;
|
310
|
+
}).sort(function(a, b) {
|
311
|
+
return b - a;
|
312
|
+
});
|
313
|
+
if ($.browser.msie6) {
|
314
|
+
containers.each(function() {
|
315
|
+
this.minHeight = heights[0] + 'px';
|
316
|
+
this.style.setExpression('behaviour', 'this.style.height = this.minHeight ? this.minHeight : "1px"'); // using an expression to not make print styles useless
|
317
|
+
});
|
318
|
+
} else {
|
319
|
+
containers.css({'min-height': heights[0] + 'px'});
|
320
|
+
}
|
321
|
+
};
|
322
|
+
// call once for initialization
|
323
|
+
_setAutoHeight();
|
324
|
+
// trigger auto height adjustment if needed
|
325
|
+
var cachedWidth = container.offsetWidth;
|
326
|
+
var cachedHeight = container.offsetHeight;
|
327
|
+
var watchFontSize = $('#tabs-watch-font-size').get(0) || $('<span id="tabs-watch-font-size">M</span>').css({display: 'block', position: 'absolute', visibility: 'hidden'}).appendTo(document.body).get(0);
|
328
|
+
var cachedFontSize = watchFontSize.offsetHeight;
|
329
|
+
setInterval(function() {
|
330
|
+
var currentWidth = container.offsetWidth;
|
331
|
+
var currentHeight = container.offsetHeight;
|
332
|
+
var currentFontSize = watchFontSize.offsetHeight;
|
333
|
+
if (currentHeight > cachedHeight || currentWidth != cachedWidth || currentFontSize != cachedFontSize) {
|
334
|
+
_setAutoHeight((currentWidth > cachedWidth || currentFontSize < cachedFontSize)); // if heights gets smaller reset min-height
|
335
|
+
cachedWidth = currentWidth;
|
336
|
+
cachedHeight = currentHeight;
|
337
|
+
cachedFontSize = currentFontSize;
|
338
|
+
}
|
339
|
+
}, 50);
|
340
|
+
}
|
341
|
+
|
342
|
+
// setup animations
|
343
|
+
var showAnim = {}, hideAnim = {}, showSpeed = settings.fxShowSpeed || settings.fxSpeed, hideSpeed = settings.fxHideSpeed || settings.fxSpeed;
|
344
|
+
if (settings.fxSlide || settings.fxFade) {
|
345
|
+
if (settings.fxSlide) {
|
346
|
+
showAnim['height'] = 'show';
|
347
|
+
hideAnim['height'] = 'hide';
|
348
|
+
}
|
349
|
+
if (settings.fxFade) {
|
350
|
+
showAnim['opacity'] = 'show';
|
351
|
+
hideAnim['opacity'] = 'hide';
|
352
|
+
}
|
353
|
+
} else {
|
354
|
+
if (settings.fxShow) {
|
355
|
+
showAnim = settings.fxShow;
|
356
|
+
} else { // use some kind of animation to prevent browser scrolling to the tab
|
357
|
+
showAnim['min-width'] = 0; // avoid opacity, causes flicker in Firefox
|
358
|
+
showSpeed = 1; // as little as 1 is sufficient
|
359
|
+
}
|
360
|
+
if (settings.fxHide) {
|
361
|
+
hideAnim = settings.fxHide;
|
362
|
+
} else { // use some kind of animation to prevent browser scrolling to the tab
|
363
|
+
hideAnim['min-width'] = 0; // avoid opacity, causes flicker in Firefox
|
364
|
+
hideSpeed = 1; // as little as 1 is sufficient
|
365
|
+
}
|
366
|
+
}
|
367
|
+
|
368
|
+
// callbacks
|
369
|
+
var onClick = settings.onClick, onHide = settings.onHide, onShow = settings.onShow;
|
370
|
+
|
371
|
+
// attach activateTab event, required for activating a tab programmatically
|
372
|
+
tabs.bind('triggerTab', function() {
|
373
|
+
|
374
|
+
// if the tab is already selected or disabled or animation is still running stop here
|
375
|
+
var li = $(this).parents('li:eq(0)');
|
376
|
+
if (container.locked || li.is('.' + settings.selectedClass) || li.is('.' + settings.disabledClass)) {
|
377
|
+
return false;
|
378
|
+
}
|
379
|
+
|
380
|
+
var hash = this.hash;
|
381
|
+
|
382
|
+
if ($.browser.msie) {
|
383
|
+
|
384
|
+
$(this).trigger('click');
|
385
|
+
if (settings.bookmarkable) {
|
386
|
+
$.ajaxHistory.update(hash);
|
387
|
+
location.hash = hash.replace('#', '');
|
388
|
+
}
|
389
|
+
|
390
|
+
} else if ($.browser.safari) {
|
391
|
+
|
392
|
+
// Simply setting location.hash puts Safari into the eternal load state... ugh! Submit a form instead.
|
393
|
+
var tempForm = $('<form action="' + hash + '"><div><input type="submit" value="h" /></div></form>').get(0); // no need to append it to the body
|
394
|
+
tempForm.submit(); // does not trigger the form's submit event...
|
395
|
+
$(this).trigger('click'); // ...thus do stuff here
|
396
|
+
if (settings.bookmarkable) {
|
397
|
+
$.ajaxHistory.update(hash);
|
398
|
+
}
|
399
|
+
|
400
|
+
} else {
|
401
|
+
|
402
|
+
if (settings.bookmarkable) {
|
403
|
+
location.hash = hash.replace('#', '');
|
404
|
+
} else {
|
405
|
+
$(this).trigger('click');
|
406
|
+
}
|
407
|
+
|
408
|
+
}
|
409
|
+
|
410
|
+
});
|
411
|
+
|
412
|
+
// attach disable event, required for disabling a tab
|
413
|
+
tabs.bind('disableTab', function() {
|
414
|
+
var li = $(this).parents('li:eq(0)');
|
415
|
+
if ($.browser.safari) { /* fix opacity of tab after disabling in Safari... */
|
416
|
+
li.animate({ opacity: 0 }, 1, function() {
|
417
|
+
li.css({opacity: ''});
|
418
|
+
});
|
419
|
+
}
|
420
|
+
li.addClass(settings.disabledClass);
|
421
|
+
|
422
|
+
});
|
423
|
+
|
424
|
+
// disabled from settings
|
425
|
+
if (settings.disabled && settings.disabled.length) {
|
426
|
+
for (var i = 0, k = settings.disabled.length; i < k; i++) {
|
427
|
+
tabs.eq(--settings.disabled[i]).trigger('disableTab').end();
|
428
|
+
}
|
429
|
+
};
|
430
|
+
|
431
|
+
// attach enable event, required for reenabling a tab
|
432
|
+
tabs.bind('enableTab', function() {
|
433
|
+
var li = $(this).parents('li:eq(0)');
|
434
|
+
li.removeClass(settings.disabledClass);
|
435
|
+
if ($.browser.safari) { /* fix disappearing tab after enabling in Safari... */
|
436
|
+
li.animate({ opacity: 1 }, 1, function() {
|
437
|
+
li.css({opacity: ''});
|
438
|
+
});
|
439
|
+
}
|
440
|
+
});
|
441
|
+
|
442
|
+
// attach click event
|
443
|
+
tabs.bind('click', function(e) {
|
444
|
+
|
445
|
+
var trueClick = e.clientX; // add to history only if true click occured, not a triggered click
|
446
|
+
var clicked = this, li = $(this).parents('li:eq(0)'), toShow = $(this.hash), toHide = containers.filter(':visible');
|
447
|
+
|
448
|
+
// if animation is still running, tab is selected or disabled or onClick callback returns false stop here
|
449
|
+
// check if onClick returns false last so that it is not executed for a disabled tab
|
450
|
+
if (container['locked'] || li.is('.' + settings.selectedClass) || li.is('.' + settings.disabledClass) || typeof onClick == 'function' && onClick(this, toShow[0], toHide[0]) === false) {
|
451
|
+
this.blur();
|
452
|
+
return false;
|
453
|
+
}
|
454
|
+
|
455
|
+
container['locked'] = true;
|
456
|
+
|
457
|
+
// show new tab
|
458
|
+
if (toShow.size()) {
|
459
|
+
|
460
|
+
// prevent scrollbar scrolling to 0 and than back in IE7, happens only if bookmarking/history is enabled
|
461
|
+
if ($.browser.msie && settings.bookmarkable) {
|
462
|
+
var toShowId = this.hash.replace('#', '');
|
463
|
+
toShow.attr('id', '');
|
464
|
+
setTimeout(function() {
|
465
|
+
toShow.attr('id', toShowId); // restore id
|
466
|
+
}, 0);
|
467
|
+
}
|
468
|
+
|
469
|
+
var resetCSS = { display: '', overflow: '', height: '' };
|
470
|
+
if (!$.browser.msie) { // not in IE to prevent ClearType font issue
|
471
|
+
resetCSS['opacity'] = '';
|
472
|
+
}
|
473
|
+
|
474
|
+
// switch tab, animation prevents browser scrolling to the fragment
|
475
|
+
function switchTab() {
|
476
|
+
if (settings.bookmarkable && trueClick) { // add to history only if true click occured, not a triggered click
|
477
|
+
$.ajaxHistory.update(clicked.hash);
|
478
|
+
}
|
479
|
+
toHide.animate(hideAnim, hideSpeed, function() { //
|
480
|
+
$(clicked).parents('li:eq(0)').addClass(settings.selectedClass).siblings().removeClass(settings.selectedClass);
|
481
|
+
toHide.addClass(settings.hideClass).css(resetCSS); // maintain flexible height and accessibility in print etc.
|
482
|
+
if (typeof onHide == 'function') {
|
483
|
+
onHide(clicked, toShow[0], toHide[0]);
|
484
|
+
}
|
485
|
+
if (!(settings.fxSlide || settings.fxFade || settings.fxShow)) {
|
486
|
+
toShow.css('display', 'block'); // prevent occasionally occuring flicker in Firefox cause by gap between showing and hiding the tab containers
|
487
|
+
}
|
488
|
+
toShow.animate(showAnim, showSpeed, function() {
|
489
|
+
toShow.removeClass(settings.hideClass).css(resetCSS); // maintain flexible height and accessibility in print etc.
|
490
|
+
if ($.browser.msie) {
|
491
|
+
toHide[0].style.filter = '';
|
492
|
+
toShow[0].style.filter = '';
|
493
|
+
}
|
494
|
+
if (typeof onShow == 'function') {
|
495
|
+
onShow(clicked, toShow[0], toHide[0]);
|
496
|
+
}
|
497
|
+
container['locked'] = null;
|
498
|
+
});
|
499
|
+
});
|
500
|
+
}
|
501
|
+
|
502
|
+
if (!settings.remote) {
|
503
|
+
switchTab();
|
504
|
+
} else {
|
505
|
+
$(clicked).trigger('loadRemoteTab', [switchTab]);
|
506
|
+
}
|
507
|
+
|
508
|
+
} else {
|
509
|
+
alert('There is no such container.');
|
510
|
+
}
|
511
|
+
|
512
|
+
// Set scrollbar to saved position - need to use timeout with 0 to prevent browser scroll to target of hash
|
513
|
+
var scrollX = window.pageXOffset || document.documentElement && document.documentElement.scrollLeft || document.body.scrollLeft || 0;
|
514
|
+
var scrollY = window.pageYOffset || document.documentElement && document.documentElement.scrollTop || document.body.scrollTop || 0;
|
515
|
+
setTimeout(function() {
|
516
|
+
window.scrollTo(scrollX, scrollY);
|
517
|
+
}, 0);
|
518
|
+
|
519
|
+
this.blur(); // prevent IE from keeping other link focussed when using the back button
|
520
|
+
|
521
|
+
return settings.bookmarkable && !!trueClick; // convert undefined to Boolean for IE
|
522
|
+
|
523
|
+
});
|
524
|
+
|
525
|
+
// enable history support if bookmarking and history is turned on
|
526
|
+
if (settings.bookmarkable) {
|
527
|
+
$.ajaxHistory.initialize(function() {
|
528
|
+
tabs.eq(settings.initial).trigger('click').end();
|
529
|
+
});
|
530
|
+
}
|
531
|
+
|
532
|
+
});
|
533
|
+
|
534
|
+
};
|
535
|
+
|
536
|
+
/**
|
537
|
+
* Activate a tab programmatically with the given position (no zero-based index)
|
538
|
+
* or its id, e.g. the URL's fragment identifier/hash representing a tab, as if the tab
|
539
|
+
* itself were clicked.
|
540
|
+
*
|
541
|
+
* @example $('#container').triggerTab(2);
|
542
|
+
* @desc Activate the second tab of the tab interface contained in <div id="container">.
|
543
|
+
* @example $('#container').triggerTab(1);
|
544
|
+
* @desc Activate the first tab of the tab interface contained in <div id="container">.
|
545
|
+
* @example $('#container').triggerTab();
|
546
|
+
* @desc Activate the first tab of the tab interface contained in <div id="container">.
|
547
|
+
* @example $('#container').triggerTab('fragment-2');
|
548
|
+
* @desc Activate a tab via its URL fragment identifier representation.
|
549
|
+
*
|
550
|
+
* @param String|Number tab Either a string that matches the id of the tab (the URL's
|
551
|
+
* fragment identifier/hash representing a tab) or an integer
|
552
|
+
* specifying the position of the tab (no zero-based index) to
|
553
|
+
* be activated. If this parameter is omitted, the first tab
|
554
|
+
* will be activated.
|
555
|
+
* @type jQuery
|
556
|
+
*
|
557
|
+
* @name triggerTab
|
558
|
+
* @cat Plugins/Tabs
|
559
|
+
* @author Klaus Hartl/klaus.hartl@stilbuero.de
|
560
|
+
*/
|
561
|
+
|
562
|
+
/**
|
563
|
+
* Disable a tab, so that clicking it has no effect.
|
564
|
+
*
|
565
|
+
* @example $('#container').disableTab(2);
|
566
|
+
* @desc Disable the second tab of the tab interface contained in <div id="container">.
|
567
|
+
*
|
568
|
+
* @param String|Number tab Either a string that matches the id of the tab (the URL's
|
569
|
+
* fragment identifier/hash representing a tab) or an integer
|
570
|
+
* specifying the position of the tab (no zero-based index) to
|
571
|
+
* be disabled. If this parameter is omitted, the first tab
|
572
|
+
* will be disabled.
|
573
|
+
* @type jQuery
|
574
|
+
*
|
575
|
+
* @name disableTab
|
576
|
+
* @cat Plugins/Tabs
|
577
|
+
* @author Klaus Hartl/klaus.hartl@stilbuero.de
|
578
|
+
*/
|
579
|
+
|
580
|
+
/**
|
581
|
+
* Enable a tab that has been disabled.
|
582
|
+
*
|
583
|
+
* @example $('#container').enableTab(2);
|
584
|
+
* @desc Enable the second tab of the tab interface contained in <div id="container">.
|
585
|
+
*
|
586
|
+
* @param String|Number tab Either a string that matches the id of the tab (the URL's
|
587
|
+
* fragment identifier/hash representing a tab) or an integer
|
588
|
+
* specifying the position of the tab (no zero-based index) to
|
589
|
+
* be enabled. If this parameter is omitted, the first tab
|
590
|
+
* will be enabled.
|
591
|
+
* @type jQuery
|
592
|
+
*
|
593
|
+
* @name enableTab
|
594
|
+
* @cat Plugins/Tabs
|
595
|
+
* @author Klaus Hartl/klaus.hartl@stilbuero.de
|
596
|
+
*/
|
597
|
+
|
598
|
+
var tabEvents = ['triggerTab', 'disableTab', 'enableTab'];
|
599
|
+
for (var i = 0; i < tabEvents.length; i++) {
|
600
|
+
$.fn[tabEvents[i]] = (function(tabEvent) {
|
601
|
+
return function(tab) {
|
602
|
+
return this.each(function() {
|
603
|
+
var nav = $('ul.tabs-nav' , this);
|
604
|
+
nav = nav.size() && nav || $('>ul:eq(0)', this); // fallback to default structure
|
605
|
+
var a;
|
606
|
+
if (!tab || typeof tab == 'number') {
|
607
|
+
a = $('li a', nav).eq((tab && tab > 0 && tab - 1 || 0)); // fall back to 0
|
608
|
+
} else if (typeof tab == 'string') {
|
609
|
+
a = $('li a[@href$="#' + tab + '"]', nav);
|
610
|
+
}
|
611
|
+
a.trigger(tabEvent);
|
612
|
+
});
|
613
|
+
};
|
614
|
+
})(tabEvents[i]);
|
615
|
+
}
|
616
|
+
|
617
|
+
/**
|
618
|
+
* Get the position of the currently selected tab (no zero-based index).
|
619
|
+
*
|
620
|
+
* @example $('#container').activeTab();
|
621
|
+
* @desc Get the position of the currently selected tab of an interface
|
622
|
+
* contained in <div id="container">.
|
623
|
+
*
|
624
|
+
* @type Number
|
625
|
+
*
|
626
|
+
* @name activeTab
|
627
|
+
* @cat Plugins/Tabs
|
628
|
+
* @author Klaus Hartl/klaus.hartl@stilbuero.de
|
629
|
+
*/
|
630
|
+
|
631
|
+
$.fn.activeTab = function() {
|
632
|
+
var selectedTabs = [];
|
633
|
+
this.each(function() {
|
634
|
+
var nav = $('ul.tabs-nav' , this);
|
635
|
+
nav = nav.size() && nav || $('>ul:eq(0)', this); //fallback to default structure
|
636
|
+
var lis = $('li', nav);
|
637
|
+
selectedTabs.push(lis.index( lis.filter('.tabs-selected')[0] ) + 1);
|
638
|
+
});
|
639
|
+
return selectedTabs[0];
|
640
|
+
};
|
641
|
+
|
642
|
+
})(jQuery);
|