xcoll 0.5.12__py3-none-any.whl → 0.6.0__py3-none-any.whl
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- xcoll/__init__.py +5 -18
- xcoll/beam_elements/__init__.py +1 -0
- xcoll/beam_elements/absorber.py +12 -2
- xcoll/beam_elements/base.py +162 -62
- xcoll/beam_elements/blowup.py +1 -0
- xcoll/beam_elements/elements_src/black_absorber.h +57 -58
- xcoll/beam_elements/elements_src/black_crystal.h +49 -50
- xcoll/beam_elements/elements_src/everest_block.h +21 -11
- xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
- xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
- xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
- xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
- xcoll/beam_elements/everest.py +16 -5
- xcoll/beam_elements/monitor.py +1 -0
- xcoll/beam_elements/transparent.py +83 -0
- xcoll/colldb.py +15 -6
- xcoll/general.py +1 -1
- xcoll/headers/particle_states.py +51 -0
- xcoll/initial_distribution.py +121 -91
- xcoll/interaction_record/interaction_record.py +2 -1
- xcoll/interaction_record/interaction_types.py +2 -2
- xcoll/line_tools.py +163 -73
- xcoll/lossmap.py +519 -127
- xcoll/plot.py +109 -0
- xcoll/rf_sweep.py +6 -0
- xcoll/scattering_routines/engine.py +414 -217
- xcoll/scattering_routines/environment.py +297 -0
- xcoll/scattering_routines/everest/amorphous.h +95 -71
- xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
- xcoll/scattering_routines/everest/constants.h +1 -1
- xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
- xcoll/scattering_routines/everest/everest.h +8 -3
- xcoll/scattering_routines/everest/everest.py +2 -1
- xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
- xcoll/scattering_routines/everest/jaw.h +19 -24
- xcoll/scattering_routines/everest/materials.py +2 -0
- xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
- xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
- xcoll/scattering_routines/everest/properties.h +3 -72
- xcoll/xaux.py +65 -109
- {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/METADATA +5 -5
- xcoll-0.6.0.dist-info/RECORD +135 -0
- xcoll/_manager.py +0 -22
- xcoll/headers/particle_states.h +0 -25
- xcoll/install.py +0 -35
- xcoll/scattering_routines/geant4/collimasim/.git +0 -1
- xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
- xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
- xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
- xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
- xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
- xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
- xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
- xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
- xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
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- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
- xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
- xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
- xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
- xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
- xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
- xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
- xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
- xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
- xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
- xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
- xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
- xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
- xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
- xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
- xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
- xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
- xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
- xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
- xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
- xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
- xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
- xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
- xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
- xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
- xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
- xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
- xcoll-0.5.12.dist-info/RECORD +0 -415
- {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/LICENSE +0 -0
- {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/NOTICE +0 -0
- {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/WHEEL +0 -0
xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp
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/*
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tests/test_sequences_and_iterators.cpp -- supporting Pythons' sequence protocol, iterators,
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etc.
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Copyright (c) 2016 Wenzel Jakob <wenzel.jakob@epfl.ch>
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All rights reserved. Use of this source code is governed by a
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BSD-style license that can be found in the LICENSE file.
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*/
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#include "pybind11_tests.h"
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#include "constructor_stats.h"
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#include <pybind11/operators.h>
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explicit NonZeroIterator(const T *ptr) : ptr_(ptr) {}
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};
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class NonZeroSentinel {};
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bool operator==(const NonZeroIterator<std::pair<A, B>>& it, const NonZeroSentinel&) {
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}
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explicit NonRefIterator(const T *ptr) : ptr_(ptr) {}
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T operator*() const { return T(*ptr_); }
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};
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NonCopyableInt(NonCopyableInt &&other) noexcept : value_(other.value_) {
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}
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int get() const { return value_; }
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int value_;
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using NonCopyableIntPair = std::pair<NonCopyableInt, NonCopyableInt>;
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PYBIND11_MAKE_OPAQUE(std::vector<NonCopyableInt>);
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PYBIND11_MAKE_OPAQUE(std::vector<NonCopyableIntPair>);
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}
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TEST_SUBMODULE(sequences_and_iterators, m) {
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.def(py::init<int>())
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m.def("make_forward_slice_size_t", []() { return py::slice(0, -1, 1); });
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m.def("make_reversed_slice_size_t_optional_verbose", []() { return py::slice(std::nullopt, std::nullopt, -1); });
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// Please use with caution.
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// test_sequence
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class Sequence {
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m_data = new float[m_size];
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memcpy(m_data, &value[0], sizeof(float) * m_size);
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}
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Sequence(const Sequence &s) : m_size(s.m_size) {
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print_copy_created(this);
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m_data = new float[m_size];
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memcpy(m_data, s.m_data, sizeof(float)*m_size);
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}
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Sequence(Sequence &&s) noexcept : m_size(s.m_size), m_data(s.m_data) {
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print_move_created(this);
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s.m_size = 0;
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s.m_data = nullptr;
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}
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~Sequence() { print_destroyed(this); delete[] m_data; }
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Sequence &operator=(const Sequence &s) {
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if (&s != this) {
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delete[] m_data;
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|
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m_size = s.m_size;
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m_data = new float[m_size];
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memcpy(m_data, s.m_data, sizeof(float)*m_size);
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}
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|
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print_copy_assigned(this);
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|
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return *this;
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|
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}
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|
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185
|
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Sequence &operator=(Sequence &&s) noexcept {
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|
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if (&s != this) {
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delete[] m_data;
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|
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m_size = s.m_size;
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|
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m_data = s.m_data;
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|
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s.m_size = 0;
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|
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s.m_data = nullptr;
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192
|
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}
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|
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print_move_assigned(this);
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194
|
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return *this;
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195
|
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}
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|
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197
|
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bool operator==(const Sequence &s) const {
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if (m_size != s.size()) return false;
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for (size_t i = 0; i < m_size; ++i)
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200
|
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if (m_data[i] != s[i])
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return false;
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|
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return true;
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203
|
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}
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|
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bool operator!=(const Sequence &s) const { return !operator==(s); }
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|
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206
|
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float operator[](size_t index) const { return m_data[index]; }
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|
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float &operator[](size_t index) { return m_data[index]; }
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|
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209
|
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bool contains(float v) const {
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for (size_t i = 0; i < m_size; ++i)
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|
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if (v == m_data[i])
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return true;
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213
|
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return false;
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214
|
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}
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215
|
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216
|
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Sequence reversed() const {
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217
|
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Sequence result(m_size);
|
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218
|
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for (size_t i = 0; i < m_size; ++i)
|
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219
|
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result[m_size - i - 1] = m_data[i];
|
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220
|
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return result;
|
|
221
|
-
}
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222
|
-
|
|
223
|
-
size_t size() const { return m_size; }
|
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224
|
-
|
|
225
|
-
const float *begin() const { return m_data; }
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226
|
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const float *end() const { return m_data+m_size; }
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|
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|
|
228
|
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private:
|
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229
|
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size_t m_size;
|
|
230
|
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float *m_data;
|
|
231
|
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};
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232
|
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py::class_<Sequence>(m, "Sequence")
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233
|
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.def(py::init<size_t>())
|
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234
|
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.def(py::init<const std::vector<float> &>())
|
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235
|
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/// Bare bones interface
|
|
236
|
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.def("__getitem__",
|
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237
|
-
[](const Sequence &s, size_t i) {
|
|
238
|
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if (i >= s.size())
|
|
239
|
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throw py::index_error();
|
|
240
|
-
return s[i];
|
|
241
|
-
})
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|
242
|
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.def("__setitem__",
|
|
243
|
-
[](Sequence &s, size_t i, float v) {
|
|
244
|
-
if (i >= s.size())
|
|
245
|
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throw py::index_error();
|
|
246
|
-
s[i] = v;
|
|
247
|
-
})
|
|
248
|
-
.def("__len__", &Sequence::size)
|
|
249
|
-
/// Optional sequence protocol operations
|
|
250
|
-
.def(
|
|
251
|
-
"__iter__",
|
|
252
|
-
[](const Sequence &s) { return py::make_iterator(s.begin(), s.end()); },
|
|
253
|
-
py::keep_alive<0, 1>() /* Essential: keep object alive while iterator exists */)
|
|
254
|
-
.def("__contains__", [](const Sequence &s, float v) { return s.contains(v); })
|
|
255
|
-
.def("__reversed__", [](const Sequence &s) -> Sequence { return s.reversed(); })
|
|
256
|
-
/// Slicing protocol (optional)
|
|
257
|
-
.def("__getitem__",
|
|
258
|
-
[](const Sequence &s, const py::slice &slice) -> Sequence * {
|
|
259
|
-
size_t start = 0, stop = 0, step = 0, slicelength = 0;
|
|
260
|
-
if (!slice.compute(s.size(), &start, &stop, &step, &slicelength))
|
|
261
|
-
throw py::error_already_set();
|
|
262
|
-
auto *seq = new Sequence(slicelength);
|
|
263
|
-
for (size_t i = 0; i < slicelength; ++i) {
|
|
264
|
-
(*seq)[i] = s[start];
|
|
265
|
-
start += step;
|
|
266
|
-
}
|
|
267
|
-
return seq;
|
|
268
|
-
})
|
|
269
|
-
.def("__setitem__",
|
|
270
|
-
[](Sequence &s, const py::slice &slice, const Sequence &value) {
|
|
271
|
-
size_t start = 0, stop = 0, step = 0, slicelength = 0;
|
|
272
|
-
if (!slice.compute(s.size(), &start, &stop, &step, &slicelength))
|
|
273
|
-
throw py::error_already_set();
|
|
274
|
-
if (slicelength != value.size())
|
|
275
|
-
throw std::runtime_error(
|
|
276
|
-
"Left and right hand size of slice assignment have different sizes!");
|
|
277
|
-
for (size_t i = 0; i < slicelength; ++i) {
|
|
278
|
-
s[start] = value[i];
|
|
279
|
-
start += step;
|
|
280
|
-
}
|
|
281
|
-
})
|
|
282
|
-
/// Comparisons
|
|
283
|
-
.def(py::self == py::self)
|
|
284
|
-
.def(py::self != py::self)
|
|
285
|
-
// Could also define py::self + py::self for concatenation, etc.
|
|
286
|
-
;
|
|
287
|
-
|
|
288
|
-
// test_map_iterator
|
|
289
|
-
// Interface of a map-like object that isn't (directly) an unordered_map, but provides some basic
|
|
290
|
-
// map-like functionality.
|
|
291
|
-
class StringMap {
|
|
292
|
-
public:
|
|
293
|
-
StringMap() = default;
|
|
294
|
-
explicit StringMap(std::unordered_map<std::string, std::string> init)
|
|
295
|
-
: map(std::move(init)) {}
|
|
296
|
-
|
|
297
|
-
void set(const std::string &key, std::string val) { map[key] = std::move(val); }
|
|
298
|
-
std::string get(const std::string &key) const { return map.at(key); }
|
|
299
|
-
size_t size() const { return map.size(); }
|
|
300
|
-
private:
|
|
301
|
-
std::unordered_map<std::string, std::string> map;
|
|
302
|
-
public:
|
|
303
|
-
decltype(map.cbegin()) begin() const { return map.cbegin(); }
|
|
304
|
-
decltype(map.cend()) end() const { return map.cend(); }
|
|
305
|
-
};
|
|
306
|
-
py::class_<StringMap>(m, "StringMap")
|
|
307
|
-
.def(py::init<>())
|
|
308
|
-
.def(py::init<std::unordered_map<std::string, std::string>>())
|
|
309
|
-
.def("__getitem__",
|
|
310
|
-
[](const StringMap &map, const std::string &key) {
|
|
311
|
-
try {
|
|
312
|
-
return map.get(key);
|
|
313
|
-
} catch (const std::out_of_range &) {
|
|
314
|
-
throw py::key_error("key '" + key + "' does not exist");
|
|
315
|
-
}
|
|
316
|
-
})
|
|
317
|
-
.def("__setitem__", &StringMap::set)
|
|
318
|
-
.def("__len__", &StringMap::size)
|
|
319
|
-
.def(
|
|
320
|
-
"__iter__",
|
|
321
|
-
[](const StringMap &map) { return py::make_key_iterator(map.begin(), map.end()); },
|
|
322
|
-
py::keep_alive<0, 1>())
|
|
323
|
-
.def(
|
|
324
|
-
"items",
|
|
325
|
-
[](const StringMap &map) { return py::make_iterator(map.begin(), map.end()); },
|
|
326
|
-
py::keep_alive<0, 1>())
|
|
327
|
-
.def(
|
|
328
|
-
"values",
|
|
329
|
-
[](const StringMap &map) { return py::make_value_iterator(map.begin(), map.end()); },
|
|
330
|
-
py::keep_alive<0, 1>());
|
|
331
|
-
|
|
332
|
-
// test_generalized_iterators
|
|
333
|
-
class IntPairs {
|
|
334
|
-
public:
|
|
335
|
-
explicit IntPairs(std::vector<std::pair<int, int>> data) : data_(std::move(data)) {}
|
|
336
|
-
const std::pair<int, int>* begin() const { return data_.data(); }
|
|
337
|
-
// .end() only required for py::make_iterator(self) overload
|
|
338
|
-
const std::pair<int, int>* end() const { return data_.data() + data_.size(); }
|
|
339
|
-
private:
|
|
340
|
-
std::vector<std::pair<int, int>> data_;
|
|
341
|
-
};
|
|
342
|
-
py::class_<IntPairs>(m, "IntPairs")
|
|
343
|
-
.def(py::init<std::vector<std::pair<int, int>>>())
|
|
344
|
-
.def("nonzero", [](const IntPairs& s) {
|
|
345
|
-
return py::make_iterator(NonZeroIterator<std::pair<int, int>>(s.begin()), NonZeroSentinel());
|
|
346
|
-
}, py::keep_alive<0, 1>())
|
|
347
|
-
.def("nonzero_keys", [](const IntPairs& s) {
|
|
348
|
-
return py::make_key_iterator(NonZeroIterator<std::pair<int, int>>(s.begin()), NonZeroSentinel());
|
|
349
|
-
}, py::keep_alive<0, 1>())
|
|
350
|
-
.def("nonzero_values", [](const IntPairs& s) {
|
|
351
|
-
return py::make_value_iterator(NonZeroIterator<std::pair<int, int>>(s.begin()), NonZeroSentinel());
|
|
352
|
-
}, py::keep_alive<0, 1>())
|
|
353
|
-
|
|
354
|
-
// test iterator that returns values instead of references
|
|
355
|
-
.def("nonref", [](const IntPairs& s) {
|
|
356
|
-
return py::make_iterator(NonRefIterator<std::pair<int, int>>(s.begin()),
|
|
357
|
-
NonRefIterator<std::pair<int, int>>(s.end()));
|
|
358
|
-
}, py::keep_alive<0, 1>())
|
|
359
|
-
.def("nonref_keys", [](const IntPairs& s) {
|
|
360
|
-
return py::make_key_iterator(NonRefIterator<std::pair<int, int>>(s.begin()),
|
|
361
|
-
NonRefIterator<std::pair<int, int>>(s.end()));
|
|
362
|
-
}, py::keep_alive<0, 1>())
|
|
363
|
-
.def("nonref_values", [](const IntPairs& s) {
|
|
364
|
-
return py::make_value_iterator(NonRefIterator<std::pair<int, int>>(s.begin()),
|
|
365
|
-
NonRefIterator<std::pair<int, int>>(s.end()));
|
|
366
|
-
}, py::keep_alive<0, 1>())
|
|
367
|
-
|
|
368
|
-
// test single-argument make_iterator
|
|
369
|
-
.def("simple_iterator", [](IntPairs& self) {
|
|
370
|
-
return py::make_iterator(self);
|
|
371
|
-
}, py::keep_alive<0, 1>())
|
|
372
|
-
.def("simple_keys", [](IntPairs& self) {
|
|
373
|
-
return py::make_key_iterator(self);
|
|
374
|
-
}, py::keep_alive<0, 1>())
|
|
375
|
-
.def("simple_values", [](IntPairs& self) {
|
|
376
|
-
return py::make_value_iterator(self);
|
|
377
|
-
}, py::keep_alive<0, 1>())
|
|
378
|
-
|
|
379
|
-
// Test iterator with an Extra (doesn't do anything useful, so not used
|
|
380
|
-
// at runtime, but tests need to be able to compile with the correct
|
|
381
|
-
// overload. See PR #3293.
|
|
382
|
-
.def("_make_iterator_extras", [](IntPairs& self) {
|
|
383
|
-
return py::make_iterator(self, py::call_guard<int>());
|
|
384
|
-
}, py::keep_alive<0, 1>())
|
|
385
|
-
.def("_make_key_extras", [](IntPairs& self) {
|
|
386
|
-
return py::make_key_iterator(self, py::call_guard<int>());
|
|
387
|
-
}, py::keep_alive<0, 1>())
|
|
388
|
-
.def("_make_value_extras", [](IntPairs& self) {
|
|
389
|
-
return py::make_value_iterator(self, py::call_guard<int>());
|
|
390
|
-
}, py::keep_alive<0, 1>())
|
|
391
|
-
;
|
|
392
|
-
|
|
393
|
-
// test_iterater_referencing
|
|
394
|
-
py::class_<NonCopyableInt>(m, "NonCopyableInt")
|
|
395
|
-
.def(py::init<int>())
|
|
396
|
-
.def("set", &NonCopyableInt::set)
|
|
397
|
-
.def("__int__", &NonCopyableInt::get)
|
|
398
|
-
;
|
|
399
|
-
py::class_<std::vector<NonCopyableInt>>(m, "VectorNonCopyableInt")
|
|
400
|
-
.def(py::init<>())
|
|
401
|
-
.def("append", [](std::vector<NonCopyableInt> &vec, int value) {
|
|
402
|
-
vec.emplace_back(value);
|
|
403
|
-
})
|
|
404
|
-
.def("__iter__", [](std::vector<NonCopyableInt> &vec) {
|
|
405
|
-
return py::make_iterator(vec.begin(), vec.end());
|
|
406
|
-
})
|
|
407
|
-
;
|
|
408
|
-
py::class_<std::vector<NonCopyableIntPair>>(m, "VectorNonCopyableIntPair")
|
|
409
|
-
.def(py::init<>())
|
|
410
|
-
.def("append", [](std::vector<NonCopyableIntPair> &vec, const std::pair<int, int> &value) {
|
|
411
|
-
vec.emplace_back(NonCopyableInt(value.first), NonCopyableInt(value.second));
|
|
412
|
-
})
|
|
413
|
-
.def("keys", [](std::vector<NonCopyableIntPair> &vec) {
|
|
414
|
-
return py::make_key_iterator(vec.begin(), vec.end());
|
|
415
|
-
})
|
|
416
|
-
.def("values", [](std::vector<NonCopyableIntPair> &vec) {
|
|
417
|
-
return py::make_value_iterator(vec.begin(), vec.end());
|
|
418
|
-
})
|
|
419
|
-
;
|
|
420
|
-
|
|
421
|
-
#if 0
|
|
422
|
-
// Obsolete: special data structure for exposing custom iterator types to python
|
|
423
|
-
// kept here for illustrative purposes because there might be some use cases which
|
|
424
|
-
// are not covered by the much simpler py::make_iterator
|
|
425
|
-
|
|
426
|
-
struct PySequenceIterator {
|
|
427
|
-
PySequenceIterator(const Sequence &seq, py::object ref) : seq(seq), ref(ref) { }
|
|
428
|
-
|
|
429
|
-
float next() {
|
|
430
|
-
if (index == seq.size())
|
|
431
|
-
throw py::stop_iteration();
|
|
432
|
-
return seq[index++];
|
|
433
|
-
}
|
|
434
|
-
|
|
435
|
-
const Sequence &seq;
|
|
436
|
-
py::object ref; // keep a reference
|
|
437
|
-
size_t index = 0;
|
|
438
|
-
};
|
|
439
|
-
|
|
440
|
-
py::class_<PySequenceIterator>(seq, "Iterator")
|
|
441
|
-
.def("__iter__", [](PySequenceIterator &it) -> PySequenceIterator& { return it; })
|
|
442
|
-
.def("__next__", &PySequenceIterator::next);
|
|
443
|
-
|
|
444
|
-
On the actual Sequence object, the iterator would be constructed as follows:
|
|
445
|
-
.def("__iter__", [](py::object s) { return PySequenceIterator(s.cast<const Sequence &>(), s); })
|
|
446
|
-
#endif
|
|
447
|
-
|
|
448
|
-
// test_python_iterator_in_cpp
|
|
449
|
-
m.def("object_to_list", [](const py::object &o) {
|
|
450
|
-
auto l = py::list();
|
|
451
|
-
for (auto item : o) {
|
|
452
|
-
l.append(item);
|
|
453
|
-
}
|
|
454
|
-
return l;
|
|
455
|
-
});
|
|
456
|
-
|
|
457
|
-
m.def("iterator_to_list", [](py::iterator it) {
|
|
458
|
-
auto l = py::list();
|
|
459
|
-
while (it != py::iterator::sentinel()) {
|
|
460
|
-
l.append(*it);
|
|
461
|
-
++it;
|
|
462
|
-
}
|
|
463
|
-
return l;
|
|
464
|
-
});
|
|
465
|
-
|
|
466
|
-
// test_sequence_length: check that Python sequences can be converted to py::sequence.
|
|
467
|
-
m.def("sequence_length", [](const py::sequence &seq) { return seq.size(); });
|
|
468
|
-
|
|
469
|
-
// Make sure that py::iterator works with std algorithms
|
|
470
|
-
m.def("count_none", [](const py::object &o) {
|
|
471
|
-
return std::count_if(o.begin(), o.end(), [](py::handle h) { return h.is_none(); });
|
|
472
|
-
});
|
|
473
|
-
|
|
474
|
-
m.def("find_none", [](const py::object &o) {
|
|
475
|
-
auto it = std::find_if(o.begin(), o.end(), [](py::handle h) { return h.is_none(); });
|
|
476
|
-
return it->is_none();
|
|
477
|
-
});
|
|
478
|
-
|
|
479
|
-
m.def("count_nonzeros", [](const py::dict &d) {
|
|
480
|
-
return std::count_if(d.begin(), d.end(), [](std::pair<py::handle, py::handle> p) {
|
|
481
|
-
return p.second.cast<int>() != 0;
|
|
482
|
-
});
|
|
483
|
-
});
|
|
484
|
-
|
|
485
|
-
m.def("tuple_iterator", &test_random_access_iterator<py::tuple>);
|
|
486
|
-
m.def("list_iterator", &test_random_access_iterator<py::list>);
|
|
487
|
-
m.def("sequence_iterator", &test_random_access_iterator<py::sequence>);
|
|
488
|
-
|
|
489
|
-
// test_iterator_passthrough
|
|
490
|
-
// #181: iterator passthrough did not compile
|
|
491
|
-
m.def("iterator_passthrough", [](py::iterator s) -> py::iterator {
|
|
492
|
-
return py::make_iterator(std::begin(s), std::end(s));
|
|
493
|
-
});
|
|
494
|
-
|
|
495
|
-
// test_iterator_rvp
|
|
496
|
-
// #388: Can't make iterators via make_iterator() with different r/v policies
|
|
497
|
-
static std::vector<int> list = { 1, 2, 3 };
|
|
498
|
-
m.def("make_iterator_1", []() { return py::make_iterator<py::return_value_policy::copy>(list); });
|
|
499
|
-
m.def("make_iterator_2", []() { return py::make_iterator<py::return_value_policy::automatic>(list); });
|
|
500
|
-
}
|