xcoll 0.5.12__py3-none-any.whl → 0.6.0__py3-none-any.whl

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Files changed (333) hide show
  1. xcoll/__init__.py +5 -18
  2. xcoll/beam_elements/__init__.py +1 -0
  3. xcoll/beam_elements/absorber.py +12 -2
  4. xcoll/beam_elements/base.py +162 -62
  5. xcoll/beam_elements/blowup.py +1 -0
  6. xcoll/beam_elements/elements_src/black_absorber.h +57 -58
  7. xcoll/beam_elements/elements_src/black_crystal.h +49 -50
  8. xcoll/beam_elements/elements_src/everest_block.h +21 -11
  9. xcoll/beam_elements/elements_src/everest_collimator.h +100 -91
  10. xcoll/beam_elements/elements_src/everest_crystal.h +145 -140
  11. xcoll/beam_elements/elements_src/transparent_collimator.h +126 -0
  12. xcoll/beam_elements/elements_src/transparent_crystal.h +118 -0
  13. xcoll/beam_elements/everest.py +16 -5
  14. xcoll/beam_elements/monitor.py +1 -0
  15. xcoll/beam_elements/transparent.py +83 -0
  16. xcoll/colldb.py +15 -6
  17. xcoll/general.py +1 -1
  18. xcoll/headers/particle_states.py +51 -0
  19. xcoll/initial_distribution.py +121 -91
  20. xcoll/interaction_record/interaction_record.py +2 -1
  21. xcoll/interaction_record/interaction_types.py +2 -2
  22. xcoll/line_tools.py +163 -73
  23. xcoll/lossmap.py +519 -127
  24. xcoll/plot.py +109 -0
  25. xcoll/rf_sweep.py +6 -0
  26. xcoll/scattering_routines/engine.py +414 -217
  27. xcoll/scattering_routines/environment.py +297 -0
  28. xcoll/scattering_routines/everest/amorphous.h +95 -71
  29. xcoll/scattering_routines/everest/{channeling.h → channelling.h} +121 -112
  30. xcoll/scattering_routines/everest/constants.h +1 -1
  31. xcoll/scattering_routines/everest/crystal_parameters.h +9 -9
  32. xcoll/scattering_routines/everest/everest.h +8 -3
  33. xcoll/scattering_routines/everest/everest.py +2 -1
  34. xcoll/scattering_routines/everest/ionisation_loss.h +141 -0
  35. xcoll/scattering_routines/everest/jaw.h +19 -24
  36. xcoll/scattering_routines/everest/materials.py +2 -0
  37. xcoll/scattering_routines/everest/multiple_coulomb_scattering.h +2 -2
  38. xcoll/scattering_routines/everest/nuclear_interaction.h +35 -19
  39. xcoll/scattering_routines/everest/properties.h +3 -72
  40. xcoll/xaux.py +65 -109
  41. {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/METADATA +5 -5
  42. xcoll-0.6.0.dist-info/RECORD +135 -0
  43. xcoll/_manager.py +0 -22
  44. xcoll/headers/particle_states.h +0 -25
  45. xcoll/install.py +0 -35
  46. xcoll/scattering_routines/geant4/collimasim/.git +0 -1
  47. xcoll/scattering_routines/geant4/collimasim/.gitignore +0 -12
  48. xcoll/scattering_routines/geant4/collimasim/.gitmodules +0 -3
  49. xcoll/scattering_routines/geant4/collimasim/CMakeLists.txt +0 -26
  50. xcoll/scattering_routines/geant4/collimasim/README.md +0 -21
  51. xcoll/scattering_routines/geant4/collimasim/docs/Makefile +0 -20
  52. xcoll/scattering_routines/geant4/collimasim/docs/make.bat +0 -35
  53. xcoll/scattering_routines/geant4/collimasim/docs/source/collimasim.rst +0 -10
  54. xcoll/scattering_routines/geant4/collimasim/docs/source/conf.py +0 -59
  55. xcoll/scattering_routines/geant4/collimasim/docs/source/index.rst +0 -26
  56. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.appveyor.yml +0 -37
  57. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-format +0 -19
  58. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.clang-tidy +0 -65
  59. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.cmake-format.yaml +0 -73
  60. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.git +0 -1
  61. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CODEOWNERS +0 -9
  62. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/CONTRIBUTING.md +0 -386
  63. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/bug-report.yml +0 -45
  64. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/ISSUE_TEMPLATE/config.yml +0 -8
  65. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/dependabot.yml +0 -16
  66. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler.yml +0 -8
  67. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/labeler_merged.yml +0 -3
  68. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/pull_request_template.md +0 -19
  69. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/ci.yml +0 -969
  70. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/configure.yml +0 -84
  71. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/format.yml +0 -48
  72. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/labeler.yml +0 -16
  73. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.github/workflows/pip.yml +0 -103
  74. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.gitignore +0 -45
  75. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.pre-commit-config.yaml +0 -151
  76. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/.readthedocs.yml +0 -3
  77. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/CMakeLists.txt +0 -297
  78. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/LICENSE +0 -29
  79. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/MANIFEST.in +0 -6
  80. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/README.rst +0 -180
  81. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Doxyfile +0 -23
  82. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/Makefile +0 -192
  83. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/_static/theme_overrides.css +0 -11
  84. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/chrono.rst +0 -81
  85. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/custom.rst +0 -93
  86. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/eigen.rst +0 -310
  87. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/functional.rst +0 -109
  88. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/index.rst +0 -43
  89. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/overview.rst +0 -171
  90. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/stl.rst +0 -251
  91. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/cast/strings.rst +0 -305
  92. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/classes.rst +0 -1297
  93. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/embedding.rst +0 -262
  94. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/exceptions.rst +0 -396
  95. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/functions.rst +0 -568
  96. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/misc.rst +0 -337
  97. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/index.rst +0 -13
  98. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/numpy.rst +0 -463
  99. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/object.rst +0 -286
  100. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/pycpp/utilities.rst +0 -155
  101. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/advanced/smart_ptrs.rst +0 -174
  102. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/basics.rst +0 -308
  103. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.py +0 -91
  104. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/benchmark.rst +0 -95
  105. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/changelog.rst +0 -2050
  106. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/classes.rst +0 -542
  107. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/cmake/index.rst +0 -8
  108. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/compiling.rst +0 -648
  109. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/conf.py +0 -381
  110. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/faq.rst +0 -343
  111. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/index.rst +0 -48
  112. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/installing.rst +0 -105
  113. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/limitations.rst +0 -72
  114. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11-logo.png +0 -0
  115. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.png +0 -0
  116. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python1.svg +0 -427
  117. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.png +0 -0
  118. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/pybind11_vs_boost_python2.svg +0 -427
  119. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/reference.rst +0 -130
  120. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/release.rst +0 -96
  121. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/requirements.txt +0 -8
  122. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/docs/upgrade.rst +0 -548
  123. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/attr.h +0 -605
  124. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/buffer_info.h +0 -144
  125. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/cast.h +0 -1432
  126. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/chrono.h +0 -213
  127. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/common.h +0 -2
  128. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/complex.h +0 -65
  129. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/class.h +0 -709
  130. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/common.h +0 -1021
  131. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/descr.h +0 -104
  132. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/init.h +0 -346
  133. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/internals.h +0 -467
  134. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/type_caster_base.h +0 -978
  135. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/detail/typeid.h +0 -55
  136. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eigen.h +0 -606
  137. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/embed.h +0 -284
  138. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/eval.h +0 -163
  139. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/functional.h +0 -121
  140. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/gil.h +0 -193
  141. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/iostream.h +0 -275
  142. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/numpy.h +0 -1741
  143. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/operators.h +0 -163
  144. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/options.h +0 -65
  145. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pybind11.h +0 -2497
  146. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/pytypes.h +0 -1879
  147. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl/filesystem.h +0 -103
  148. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl.h +0 -375
  149. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/include/pybind11/stl_bind.h +0 -747
  150. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/noxfile.py +0 -88
  151. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__init__.py +0 -11
  152. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/__main__.py +0 -52
  153. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.py +0 -12
  154. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/_version.pyi +0 -6
  155. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/commands.py +0 -21
  156. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/py.typed +0 -0
  157. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.py +0 -482
  158. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pybind11/setup_helpers.pyi +0 -63
  159. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/pyproject.toml +0 -41
  160. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.cfg +0 -56
  161. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/setup.py +0 -155
  162. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/CMakeLists.txt +0 -503
  163. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/conftest.py +0 -208
  164. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/constructor_stats.h +0 -275
  165. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/cross_module_gil_utils.cpp +0 -73
  166. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/env.py +0 -33
  167. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/pytest.ini +0 -0
  168. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_python_package/test_files.py +0 -279
  169. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/pytest.ini +0 -0
  170. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/extra_setuptools/test_setuphelper.py +0 -143
  171. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/local_bindings.h +0 -85
  172. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/object.h +0 -179
  173. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_cross_module_tests.cpp +0 -151
  174. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.cpp +0 -91
  175. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pybind11_tests.h +0 -85
  176. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/pytest.ini +0 -19
  177. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/requirements.txt +0 -12
  178. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.cpp +0 -26
  179. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_async.py +0 -25
  180. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.cpp +0 -216
  181. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_buffers.py +0 -163
  182. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.cpp +0 -286
  183. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_builtin_casters.py +0 -536
  184. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.cpp +0 -107
  185. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_call_policies.py +0 -248
  186. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.cpp +0 -227
  187. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_callbacks.py +0 -202
  188. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.cpp +0 -84
  189. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_chrono.py +0 -210
  190. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.cpp +0 -550
  191. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_class.py +0 -473
  192. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/CMakeLists.txt +0 -84
  193. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/embed.cpp +0 -21
  194. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_embed/CMakeLists.txt +0 -28
  195. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_function/CMakeLists.txt +0 -39
  196. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/installed_target/CMakeLists.txt +0 -46
  197. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/main.cpp +0 -6
  198. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_embed/CMakeLists.txt +0 -41
  199. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_function/CMakeLists.txt +0 -35
  200. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/subdirectory_target/CMakeLists.txt +0 -41
  201. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_cmake_build/test.py +0 -10
  202. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.cpp +0 -165
  203. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_constants_and_functions.py +0 -53
  204. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.cpp +0 -238
  205. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_copy_move.py +0 -126
  206. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.cpp +0 -141
  207. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_casters.py +0 -117
  208. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.cpp +0 -41
  209. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_custom_type_setup.py +0 -50
  210. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.cpp +0 -69
  211. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_docstring_options.py +0 -42
  212. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.cpp +0 -348
  213. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eigen.py +0 -771
  214. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/CMakeLists.txt +0 -47
  215. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/catch.cpp +0 -22
  216. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/external_module.cpp +0 -23
  217. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.cpp +0 -326
  218. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_embed/test_interpreter.py +0 -15
  219. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.cpp +0 -148
  220. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_enum.py +0 -272
  221. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.cpp +0 -119
  222. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval.py +0 -51
  223. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_eval_call.py +0 -5
  224. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.cpp +0 -285
  225. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.h +0 -12
  226. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_exceptions.py +0 -265
  227. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.cpp +0 -397
  228. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_factory_constructors.py +0 -520
  229. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.cpp +0 -49
  230. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_gil_scoped.py +0 -94
  231. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.cpp +0 -125
  232. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_iostream.py +0 -331
  233. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.cpp +0 -153
  234. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_kwargs_and_defaults.py +0 -284
  235. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.cpp +0 -107
  236. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_local_bindings.py +0 -257
  237. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.cpp +0 -412
  238. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_methods_and_attributes.py +0 -517
  239. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.cpp +0 -102
  240. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_modules.py +0 -92
  241. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.cpp +0 -233
  242. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_multiple_inheritance.py +0 -360
  243. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.cpp +0 -472
  244. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_array.py +0 -593
  245. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.cpp +0 -524
  246. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_dtypes.py +0 -441
  247. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.cpp +0 -103
  248. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_numpy_vectorize.py +0 -267
  249. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.cpp +0 -73
  250. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_opaque_types.py +0 -59
  251. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.cpp +0 -235
  252. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_operator_overloading.py +0 -146
  253. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.cpp +0 -189
  254. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pickling.py +0 -82
  255. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.cpp +0 -560
  256. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_pytypes.py +0 -651
  257. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.cpp +0 -500
  258. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_sequences_and_iterators.py +0 -253
  259. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.cpp +0 -452
  260. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_smart_ptr.py +0 -318
  261. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.cpp +0 -342
  262. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl.py +0 -291
  263. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.cpp +0 -131
  264. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_stl_binders.py +0 -318
  265. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.cpp +0 -144
  266. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_tagbased_polymorphic.py +0 -29
  267. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.cpp +0 -66
  268. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_thread.py +0 -44
  269. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.cpp +0 -22
  270. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_union.py +0 -9
  271. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.cpp +0 -510
  272. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/test_virtual_functions.py +0 -408
  273. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-numpy-scipy.supp +0 -140
  274. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tests/valgrind-python.supp +0 -117
  275. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindCatch.cmake +0 -70
  276. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindEigen3.cmake +0 -86
  277. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/FindPythonLibsNew.cmake +0 -257
  278. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/check-style.sh +0 -44
  279. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/cmake_uninstall.cmake.in +0 -23
  280. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/libsize.py +0 -39
  281. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/make_changelog.py +0 -64
  282. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Common.cmake +0 -402
  283. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Config.cmake.in +0 -233
  284. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11NewTools.cmake +0 -276
  285. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pybind11Tools.cmake +0 -214
  286. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/pyproject.toml +0 -3
  287. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_global.py.in +0 -65
  288. xcoll/scattering_routines/geant4/collimasim/lib/pybind11/tools/setup_main.py.in +0 -41
  289. xcoll/scattering_routines/geant4/collimasim/pyproject.toml +0 -8
  290. xcoll/scattering_routines/geant4/collimasim/setup.py +0 -144
  291. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.cpp +0 -403
  292. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSPyATInterface.hh +0 -100
  293. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.cpp +0 -763
  294. xcoll/scattering_routines/geant4/collimasim/src/collimasim/BDSXtrackInterface.hh +0 -118
  295. xcoll/scattering_routines/geant4/collimasim/src/collimasim/__init__.py +0 -8
  296. xcoll/scattering_routines/geant4/collimasim/src/collimasim/bindings.cpp +0 -63
  297. xcoll/scattering_routines/geant4/collimasim/src/collimasim/pyCollimatorPass.py +0 -142
  298. xcoll/scattering_routines/geant4/collimasim/src/collimasim/xtrack_collimator.py +0 -556
  299. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/PKG-INFO +0 -6
  300. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/SOURCES.txt +0 -24
  301. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/dependency_links.txt +0 -1
  302. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/not-zip-safe +0 -1
  303. xcoll/scattering_routines/geant4/collimasim/src/collimasim.egg-info/top_level.txt +0 -1
  304. xcoll/scattering_routines/geant4/collimasim/tests/README.md +0 -25
  305. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_forions.dat +0 -25
  306. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_new_example.dat +0 -18
  307. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_old_example.dat +0 -68
  308. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_testing.dat +0 -15
  309. xcoll/scattering_routines/geant4/collimasim/tests/resources/CollDB_yaml_example.yaml +0 -110
  310. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps.dat +0 -7
  311. xcoll/scattering_routines/geant4/collimasim/tests/resources/collgaps_pyat_test.dat +0 -3
  312. xcoll/scattering_routines/geant4/collimasim/tests/resources/collonly_twiss_file_example.tfs +0 -54
  313. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings.gmad +0 -3
  314. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_black_absorber.gmad +0 -3
  315. xcoll/scattering_routines/geant4/collimasim/tests/resources/settings_ions.gmad +0 -5
  316. xcoll/scattering_routines/geant4/collimasim/tests/resources/twiss_file_testing.tfs +0 -51
  317. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat.py +0 -65
  318. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_passmethod.py +0 -59
  319. xcoll/scattering_routines/geant4/collimasim/tests/test_pyat_tracking.py +0 -102
  320. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack.py +0 -75
  321. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_angle.py +0 -74
  322. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_colldb_load.py +0 -84
  323. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction.py +0 -159
  324. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_interaction_ion.py +0 -99
  325. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_ions.py +0 -78
  326. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_lost_energy.py +0 -88
  327. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tilt.py +0 -80
  328. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking.py +0 -97
  329. xcoll/scattering_routines/geant4/collimasim/tests/test_xtrack_tracking_ions.py +0 -96
  330. xcoll-0.5.12.dist-info/RECORD +0 -415
  331. {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/LICENSE +0 -0
  332. {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/NOTICE +0 -0
  333. {xcoll-0.5.12.dist-info → xcoll-0.6.0.dist-info}/WHEEL +0 -0
@@ -1,97 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
-
8
- import multiprocessing
9
-
10
- def make_particles():
11
- np.random.seed(seed=1994)
12
- n_part = 5000
13
- particles = xp.Particles(
14
- _capacity=n_part,
15
- p0c = 185.e9,
16
- mass0 = xp.ELECTRON_MASS_EV,
17
- x=np.random.uniform(-1e-3, 1e-3, n_part),
18
- px=np.random.uniform(-1e-4, 1e-4, n_part),
19
- y=np.random.uniform(-1e-3, 1e-3, n_part),
20
- py=np.random.uniform(-1e-4, 1e-4, n_part),
21
- zeta=np.random.uniform(-0.1, 0.1, n_part),
22
- delta=np.random.uniform(-0.9, 0.9, n_part),
23
- )
24
-
25
- return particles
26
-
27
-
28
- def run_g4_logitudinal(particles):
29
- np.random.seed(seed=1994)
30
-
31
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_testing.dat",
32
- bdsim_config_file="resources/settings_black_absorber.gmad",
33
- tfs_file="resources/twiss_file_testing.tfs",
34
- reference_pdg_id=-11,
35
- reference_kinetic_energy=182.5e9,
36
- emittance_norm=(1.e-3, 1.e-6),
37
- relative_energy_cut=0.001,
38
- seed=1993,
39
- # batchMode=False
40
- batchMode=True
41
- )
42
-
43
- coll1 = g4man.make_xtg4_collimator("coll_open") # Use new convenience method
44
-
45
- # Generate a simple sequence
46
- line = xt.Line(
47
- elements=[coll1,
48
- ])
49
-
50
- context = xo.ContextCpu()
51
- line.build_tracker(_context=context)
52
-
53
- part_copy = particles.copy()
54
- line.track(part_copy, num_turns=1)
55
- part_copy.remove_unused_space()
56
-
57
- return part_copy
58
-
59
- def run_drift_logitudinal(particles):
60
-
61
- line = xt.Line(
62
- elements=[xt.Drift(length=10),
63
- ])
64
-
65
- context = xo.ContextCpu()
66
- line.config.XTRACK_USE_EXACT_DRIFTS = True
67
- line.build_tracker(_context=context)
68
-
69
- part_copy = particles.copy()
70
- line.track(part_copy, num_turns=1)
71
- part_copy.remove_unused_space()
72
-
73
- return part_copy
74
-
75
-
76
- def test_xtrack_tracking():
77
- particles = make_particles()
78
- part_g4 = run_g4_logitudinal(particles)
79
- part_dr = run_drift_logitudinal(particles)
80
-
81
- # BDSIM tracks trough some geometry padding now, which is not corrected for now
82
- # so use a fairly lenient tolerance of 1e-8 for all coordinates over 10 m of drift
83
- all_close = True
84
- for var in ['x', 'px', 'y', 'py', 'zeta', 'delta']:
85
- atol = 1e-8
86
- rtol = 1e-5
87
- var_close = np.all(np.isclose(getattr(part_g4, var), getattr(part_dr, var), atol=atol, rtol=rtol))
88
-
89
- all_close &= var_close
90
- print("Var {}: {}".format(var, var_close))
91
-
92
- assert all_close
93
-
94
-
95
-
96
- if __name__ == '__main__':
97
- test_xtrack_tracking()
@@ -1,96 +0,0 @@
1
- import numpy as np
2
- import xobjects as xo
3
- import xtrack as xt
4
- import xpart as xp
5
-
6
- import collimasim as cs
7
-
8
- import multiprocessing
9
-
10
- def make_particles():
11
- np.random.seed(seed=1994)
12
- n_part = 5000
13
- particles = xp.Particles(
14
- _capacity=n_part,
15
- p0c = 36900e9,
16
- mass0 = 193687676197.13638,
17
- x=np.random.uniform(-1e-3, 1e-3, n_part),
18
- px=np.random.uniform(-1e-4, 1e-4, n_part),
19
- y=np.random.uniform(-1e-3, 1e-3, n_part),
20
- py=np.random.uniform(-1e-4, 1e-4, n_part),
21
- zeta=np.random.uniform(-0.1, 0.1, n_part),
22
- delta=np.random.uniform(-0.4, 0.4, n_part),
23
- )
24
-
25
- return particles
26
-
27
-
28
- def run_g4_logitudinal(particles):
29
- np.random.seed(seed=1994)
30
-
31
- g4man = cs.Geant4CollimationManager(collimator_file="resources/CollDB_testing.dat",
32
- bdsim_config_file="resources/settings_black_absorber.gmad",
33
- tfs_file="resources/twiss_file_testing.tfs",
34
- reference_pdg_id=1000822080,
35
- reference_kinetic_energy=36706820652500.0,
36
- emittance_norm=(5.e-5, 5.e-5),
37
- relative_energy_cut=0.001,
38
- seed=1993,
39
- # batchMode=False
40
- batchMode=True
41
- )
42
-
43
- coll1 = g4man.make_xtg4_collimator("coll_open") # Use new convenience method
44
-
45
- # Generate a simple sequence
46
- line = xt.Line(
47
- elements=[coll1,
48
- ])
49
-
50
- context = xo.ContextCpu()
51
- line.build_tracker(_context=context)
52
-
53
- part_copy = particles.copy()
54
- line.track(part_copy, num_turns=1)
55
- part_copy.remove_unused_space()
56
-
57
- return part_copy
58
-
59
- def run_drift_logitudinal(particles):
60
-
61
- line = xt.Line(
62
- elements=[xt.Drift(length=10),
63
- ])
64
-
65
- context = xo.ContextCpu()
66
- line.config.XTRACK_USE_EXACT_DRIFTS = True
67
- line.build_tracker(_context=context)
68
-
69
- part_copy = particles.copy()
70
- line.track(part_copy, num_turns=1)
71
- part_copy.remove_unused_space()
72
-
73
- return part_copy
74
-
75
-
76
- def test_xtrack_tracking():
77
- particles = make_particles()
78
- part_g4 = run_g4_logitudinal(particles)
79
- part_dr = run_drift_logitudinal(particles)
80
-
81
- # BDSIM tracks trough some geometry padding now, which is not corrected for now
82
- # so use a fairly lenient tolerance of 1e-8 for all coordinates over 10 m of drift
83
- all_close = True
84
- for var in ['x', 'px', 'y', 'py', 'zeta', 'delta']:
85
- atol = 1e-6 # For ions, the zeta variable doesn't seem to agree so well, e.g it is up to 1e-7 m off
86
- rtol = 1e-5
87
- var_close = np.all(np.isclose(getattr(part_g4, var), getattr(part_dr, var), atol=atol, rtol=rtol))
88
-
89
- all_close &= var_close
90
- print("Var {}: {}".format(var, var_close))
91
-
92
- assert all_close
93
-
94
-
95
- if __name__ == '__main__':
96
- test_xtrack_tracking()