tomwer 1.3.26__py3-none-any.whl → 1.4.0__py3-none-any.whl

tomwer/gui/reconstruction/scores/scoreplot.py

@@ -1,51 +1,20 @@
-# coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2016-2017 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
 """
 contains gui to select a slice in a volume
 """
 
-
-__authors__ = [
-    "H. Payno",
-]
-
-__license__ = "MIT"
-__date__ = "25/02/2021"
-
+from __future__ import annotations
 
 import logging
 import os
 import weakref
 from contextlib import AbstractContextManager
-from typing import Union
 
 import numpy
 from matplotlib import image as _matplotlib_image
 from silx.gui import qt
 from silx.gui.plot import PlotWidget
 
+from tomwer.core.process.reconstruction.utils.cor import relative_pos_to_absolute
 from tomwer.core.process.reconstruction.scores.params import ScoreMethod
 from tomwer.gui import icons, settings
 from tomwer.gui.reconstruction.saaxis.dimensionwidget import DimensionWidget
@@ -61,6 +30,7 @@ _logger = logging.getLogger(__name__)
 
 class VariableScorePlot(PlotWidget):
     sigMouseWheelActive = qt.Signal(object)
+    """emit when the mouse wheel get activated"""
 
     MARKER_COLOR = "#ff292199"
 
@@ -98,10 +68,10 @@ class VariableScorePlot(PlotWidget):
     def onMouseWheel(self, xPixel, yPixel, angleInDegrees):
         pass
 
-    def _contextMenu(self, pos):
+    def _contextMenu(self, pos: qt.QPoint):
         """Handle plot area customContextMenuRequested signal.
 
-        :param QPoint pos: Mouse position relative to plot area
+        :param pos: Mouse position relative to plot area
         """
         # avoir reset zoom
         pass
@@ -113,7 +83,9 @@ class VariableSelection(qt.QWidget):
     sigSelectionModeChanged = qt.Signal()
     """Signal emitted when selection mode changed"""
     sigAutoFocusLocked = qt.Signal()
+    """signal send when the 'auto' mode is locked / activated"""
     sigAutoFocusUnLocked = qt.Signal()
+    """signal send when the 'auto' mode is unlocked / unactivated"""
 
     sigVariableValueSelected = qt.Signal(float)
     """signal emitted when the cor value is selected by the user from
@@ -336,7 +308,9 @@ class CorSelection(VariableSelection):
         if relative_value is None or self._img_width is None:
             self._absoluteVarValueLE.clear()
         else:
-            absolute_value = relative_value + self._img_width / 2.0
+            absolute_value = relative_pos_to_absolute(
+                relative_pos=relative_value, det_width=self._img_width
+            )
             self._absoluteVarValueLE.setText(f"{absolute_value:.3f}")
 
     def getWindowTitle(self):
@@ -451,7 +425,7 @@ class _VariableValueLabels(qt.QWidget):
             # paint oblique text
             with PainterRotationCM(
                 painter=painter,
-                x=var_px_pos + self._slider_ticks_margin / 2.0,
+                x=var_px_pos + (self._slider_ticks_margin / 2.0),
                 y=0,
                 angle=self.rotation_angle_degree,
             ) as l_painter:
@@ -687,13 +661,13 @@ class ScorePlot(qt.QWidget):
     def setVarScores(
         self,
         scores: dict,
-        score_method: Union[str, ScoreMethod],
+        score_method: str | ScoreMethod,
         img_width=None,
         update_only_scores=False,
     ):
         """
 
-        :param dict scores: cor value (float) as key and
+        :param scores: cor value (float) as key and
                             tuple(url: DataUrl, score: float) as value
         """
         score_method = ScoreMethod.from_value(score_method)
@@ -765,23 +739,23 @@ class ScorePlot(qt.QWidget):
         self._plot.getPlotWidget().clear()
         self._varValueWidget.setImgWidth(None)
 
-    def setVoxelSize(self, dim0, dim1, dim2, unit):
+    def setVoxelSize(self, dim0, dim1, dim2, unit: str | float):
         """
 
-        :param float dim0:
-        :param float dim1:
-        :param float dim2:
-        :param Union[str,float] unit:
+        :param dim0:
+        :param dim1:
+        :param dim2:
+        :param unit:
         """
         self._voxelSizeW.setValues(dim0=dim0, dim1=dim1, dim2=dim2, unit=unit)
 
-    def setVolumeSize(self, dim0, dim1, dim2, unit):
+    def setVolumeSize(self, dim0, dim1, dim2, unit: str | float):
         """
 
-        :param float dim0:
-        :param float dim1:
-        :param float dim2:
-        :param Union[str,float] unit:
+        :param dim0:
+        :param dim1:
+        :param dim2:
+        :param unit:
         """
         self._volumeSizeW.setValues(dim0=dim0, dim1=dim1, dim2=dim2, unit=unit)
 

tomwer/gui/reconstruction/{test → tests}/test_axis.py

@@ -1,31 +1,5 @@
 # coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2017-2019 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-__authors__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "16/06/2021"
-
+from __future__ import annotations
 
 import os
 import shutil
@@ -39,8 +13,8 @@ from silx.gui.utils.testutils import TestCaseQt
 
 from tomwer.core.process.reconstruction.axis.mode import AxisMode
 from tomwer.core.scan.nxtomoscan import NXtomoScan
-from tomwer.gui.reconstruction.axis import AxisWindow
-from tomwer.gui.reconstruction.axis.radioaxis import _ManualFramesSelection
+from tomwer.gui.reconstruction.axis import AxisMainWindow
+from tomwer.gui.reconstruction.axis.ManualFramesSelection import ManualFramesSelection
 from tomwer.synctools.axis import QAxisRP
 from tomwer.tests.datasets import TomwerCIDatasets
 from tomwer.tests.utils import skip_gui_test
@@ -54,7 +28,7 @@ class TestWindowAxis(TestCaseQt):
     def setUp(self):
         self.tempdir = tempfile.mkdtemp()
         self.recons_params = QAxisRP()
-        self._window = AxisWindow(axis_params=self.recons_params)
+        self._window = AxisMainWindow(axis_params=self.recons_params)
         self.scan = MockNXtomo(
             scan_path=os.path.join(self.tempdir, "nx_tomo.nx"),
             n_proj=10,
@@ -73,8 +47,8 @@ class TestWindowAxis(TestCaseQt):
 
     def testSetImagesNumpyArray(self):
         """Test the setImages function"""
-        radio_axis = self._window._axisWidget._radioAxis
-        radio_axis_plot = self._window._axisWidget._radioAxis.getPlot()
+        radio_axis = self._window._axisWidget
+        radio_axis_plot = self._window._axisWidget.getPlot()
         numpy.testing.assert_array_equal(
             radio_axis_plot.getPlot().getActiveImage().getData(), numpy.empty((0, 0, 4))
         )
@@ -90,7 +64,7 @@ class TestWindowAxis(TestCaseQt):
 
     def testSetScan(self):
         """Test the setScan function"""
-        radio_axis_plot = self._window._axisWidget._radioAxis.getPlot()
+        radio_axis_plot = self._window._axisWidget.getPlot()
         numpy.testing.assert_array_equal(
             radio_axis_plot.getPlot().getActiveImage().getData(), numpy.empty((0, 0, 4))
         )
@@ -107,7 +81,7 @@ class TestWindowAxis(TestCaseQt):
         correctly working"""
         imgA = numpy.random.random((100, 100))
         imgB = numpy.random.random((100, 100))
-        radio_axis = self._window._axisWidget._radioAxis
+        radio_axis = self._window._axisWidget
         radio_axis.setImages(imgA=imgA, imgB=imgB, flipB=False)
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getXShift() == 0)
@@ -116,24 +90,24 @@ class TestWindowAxis(TestCaseQt):
             radio_axis.getShiftStep() == 1.0,
             f"shift is {radio_axis.getShiftStep()} when 1.0 expected",
         )
-        radio_axis._controlWidget._shiftControl._leftButton.click()
+        radio_axis._settingsWidget._shiftControl._leftButton.click()
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getXShift() == -1)
         self.assertTrue(radio_axis.getYShift() == 0)
-        radio_axis._controlWidget._shiftControl._rightButton.click()
+        radio_axis._settingsWidget._shiftControl._rightButton.click()
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getXShift() == 0)
         self.assertTrue(radio_axis.getYShift() == 0)
-        radio_axis._controlWidget._displacementSelector._fineButton.click()
+        radio_axis._settingsWidget._displacementSelector._fineButton.click()
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getShiftStep() == 0.1)
-        radio_axis._controlWidget._shiftControl._topButton.click()
+        radio_axis._settingsWidget._shiftControl._topButton.click()
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getXShift() == 0)
         self.assertTrue(radio_axis.getYShift() == 0.1)
         radio_axis.setShiftStep(0.2)
         self.assertTrue(radio_axis.getShiftStep() == 0.2)
-        radio_axis._controlWidget._shiftControl._bottomButton.click()
+        radio_axis._settingsWidget._shiftControl._bottomButton.click()
         self.qapp.processEvents()
         self.assertTrue(radio_axis.getXShift() == 0)
         self.assertTrue(radio_axis.getYShift() == -0.1)
@@ -143,17 +117,17 @@ class TestWindowAxis(TestCaseQt):
         axis_obj = QAxisRP()
         self._window.setReconsParams(axis_obj)
         self.qapp.processEvents()
-        self.assertEqual(self._window._axisWidget._radioAxis.getMode(), axis_obj.mode)
+        self.assertEqual(self._window._axisWidget.getMode(), axis_obj.mode)
         # TODO: change the mode to see if the object is modify
 
     def testAxisObjectManual(self):
         """Test that the GUI change according to the Axis object"""
         axis_params = QAxisRP()
         axis_params.mode = AxisMode.manual
-        axis_params.set_value_ref_tomwer(-6.0)
+        axis_params.set_relative_value(-6.0)
         # note : for now only the xshift is managed !
         self._window.setReconsParams(axis_params)
-        radio_axis = self._window._axisWidget._radioAxis
+        radio_axis = self._window._axisWidget
         self.assertEqual(radio_axis.getXShift(), -6.0)
         self.assertEqual(radio_axis.getYShift(), 0.0)
 
@@ -166,7 +140,7 @@ class TestWindowsAxisSetScan(TestCaseQt):
     def setUp(self):
         TestCaseQt.setUp(self)
         self.recons_params = QAxisRP()
-        self.widget = AxisWindow(axis_params=self.recons_params)
+        self.widget = AxisMainWindow(axis_params=self.recons_params)
         self.scan_dir = tempfile.mkdtemp()
         # create dataset
         self.master_file = os.path.join(self.scan_dir, "frm_edftomomill_twoentries.nx")
@@ -197,32 +171,32 @@ def test__getClosestAssociatedAngle():
     test _getClosestAssociatedAngle function
     """
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(angle=12.3, angles=(12.3,))
+        ManualFramesSelection._getClosestAssociatedAngle(angle=12.3, angles=(12.3,))
         == 12.3
     )
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(
+        ManualFramesSelection._getClosestAssociatedAngle(
             angle=12.3, angles=(2.06, 10.3, 100.6)
         )
         == 10.3
     )
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(
+        ManualFramesSelection._getClosestAssociatedAngle(
             angle=100.2, angles=(2.06, 10.3, 100.6)
         )
         == 100.6
     )
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(angle=12.3, angles=()) is None
+        ManualFramesSelection._getClosestAssociatedAngle(angle=12.3, angles=()) is None
     )
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(
+        ManualFramesSelection._getClosestAssociatedAngle(
             angle=300.2, angles=(2.06, 10.3, 100.6)
         )
         == 100.6
     )
     assert (
-        _ManualFramesSelection._getClosestAssociatedAngle(
+        ManualFramesSelection._getClosestAssociatedAngle(
             angle=-12, angles=(2.06, 10.3, 100.6)
         )
         == 2.06

tomwer/gui/reconstruction/{test → tests}/test_nabu.py

@@ -1,30 +1,5 @@
 # coding: utf-8
-# /*##########################################################################
-# Copyright (C) 2016 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-#############################################################################*/
-
-__authors__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "05/02/2020"
+from __future__ import annotations
 
 
 import os
@@ -43,9 +18,12 @@ from tomwer.gui.reconstruction.nabu.nabuconfig.reconstruction import (
     _NabuReconstructionConfig,
 )
 from tomwer.gui.reconstruction.nabu.nabuflow import NabuFlowControl
-from tomwer.gui.reconstruction.nabu.volume import NabuVolumeWidget
+from tomwer.gui.reconstruction.nabu.volume import NabuVolumeTabWidget
+from tomwer.gui.reconstruction.axis.EstimatedCORWidget import EstimatedCORWidget
 from tomwer.tests.utils import skip_gui_test
 from tomwer.core.process.output import ProcessDataOutputDirMode
+from tomwer.tests.conftest import qtapp  # noqa F401
+from tomwer.synctools.axis import QAxisRP
 
 
 class ProcessClass:
@@ -100,7 +78,7 @@ class TestNabuFlow(TestCaseQt):
 class TestNabuPreProcConfig(TestCaseQt):
     def setUp(self):
         TestCaseQt.setUp(self)
-        self.nabuWidget = _NabuPreProcessingConfig(parent=None, scrollArea=None)
+        self.nabuWidget = _NabuPreProcessingConfig(parent=None)
 
     def tearDown(self):
         self.nabuWidget.setAttribute(qt.Qt.WA_DeleteOnClose)
@@ -124,6 +102,7 @@ class TestNabuPreProcConfig(TestCaseQt):
             "sino_rings_options": "sigma=1.0 ; levels=10 ; padding=False",
             "tilt_correction": "",
             "autotilt_options": "",
+            "rotate_projections_center": "",
         }
         self.assertEqual(self.nabuWidget.getConfiguration(), ini_conf)
 
@@ -143,6 +122,7 @@ class TestNabuPreProcConfig(TestCaseQt):
             "sino_rings_options": "sigma=1.4 ; levels=11 ; padding=True",
             "tilt_correction": "1d-correlation",
             "autotilt_options": "low_pass=1; high_pass=20",
+            "rotate_projections_center": (2.1, 3.0),
         }
         self.nabuWidget.setConfiguration(conf=conf)
         self.assertEqual(self.nabuWidget.getConfiguration(), conf)
@@ -152,7 +132,7 @@ class TestNabuPreProcConfig(TestCaseQt):
 class TestNabuPhaseConfig(TestCaseQt):
     def setUp(self):
         TestCaseQt.setUp(self)
-        self.nabuWidget = _NabuPhaseConfig(parent=None, scrollArea=None)
+        self.nabuWidget = _NabuPhaseConfig(parent=None)
 
     def tearDown(self):
         self.nabuWidget.setAttribute(qt.Qt.WA_DeleteOnClose)
@@ -208,7 +188,7 @@ class TestNabuPhaseConfig(TestCaseQt):
 class TestNabuReconstructionConfig(TestCaseQt):
     def setUp(self):
         TestCaseQt.setUp(self)
-        self.nabuWidget = _NabuReconstructionConfig(parent=None, scrollArea=None)
+        self.nabuWidget = _NabuReconstructionConfig(parent=None)
 
     def tearDown(self):
         self.nabuWidget.setAttribute(qt.Qt.WA_DeleteOnClose)
@@ -334,7 +314,7 @@ class TestNabuOutputConfig(TestCaseQt):
 class TestNabuVolumeWidget(TestCaseQt):
     def setUp(self):
         TestCaseQt.setUp(self)
-        self.nabuWidget = NabuVolumeWidget(parent=None)
+        self.nabuWidget = NabuVolumeTabWidget(parent=None)
         self.nabuWidget.setConfigurationLevel("advanced")
 
     def tearDown(self):
@@ -379,3 +359,8 @@ class TestNabuVolumeWidget(TestCaseQt):
             }
         )
         self.assertEqual(self.nabuWidget.getConfiguration(), conf)
+
+
+def test_EstimatedCorWidget(qtapp):  # noqa F811
+    """test of EstimatedCorWidget"""
+    EstimatedCORWidget(parent=None, axis_params=QAxisRP())

tomwer/gui/reconstruction/{test → tests}/test_saaxis.py

@@ -1,30 +1,5 @@
 # coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2017-2019 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-__authors__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "03/02/2021"
+from __future__ import annotations
 
 
 import os
@@ -37,7 +12,7 @@ import pytest
 from silx.gui import qt
 from silx.gui.utils.testutils import TestCaseQt
 from silx.io.url import DataUrl
-from pyunitsystem import metricsystem
+from pyunitsystem.metricsystem import MetricSystem
 
 from tomwer.core.process.reconstruction.saaxis.params import (
     ReconstructionMode,
@@ -64,11 +39,11 @@ class TestDimensionWidget(TestCaseQt):
 
     def testDimension(self):
         """Insure setting dimensions values and unit are correct"""
-        self.assertTrue(self._window.unit() is metricsystem.MetricSystem.MILLIMETER)
+        self.assertTrue(self._window.unit() is MetricSystem.MILLIMETER)
         # check initial values
         self.assertEqual(
             self._window.getValues(),
-            (0.001, 0.001, 0.001, metricsystem.MetricSystem.METER),
+            (0.001, 0.001, 0.001, MetricSystem.METER),
         )
         # set dim 0 to 20 mm
         self._window._dim0ValueQLE.setValue(20)
@@ -76,7 +51,7 @@ class TestDimensionWidget(TestCaseQt):
         self.qapp.processEvents()
         self.assertEqual(
             self._window.getValues(),
-            (0.02, 0.001, 0.001, metricsystem.MetricSystem.METER),
+            (0.02, 0.001, 0.001, MetricSystem.METER),
         )
         # set dim 1 to 0.6 millimeter
         self._window._dim1ValueQLE.setValue(0.6)
@@ -84,26 +59,24 @@ class TestDimensionWidget(TestCaseQt):
         self.qapp.processEvents()
         self.assertEqual(
             self._window.getValues(),
-            (0.02, 0.0006, 0.001, metricsystem.MetricSystem.METER),
+            (0.02, 0.0006, 0.001, MetricSystem.METER),
         )
         # change display to micrometer
-        self._window.setUnit(metricsystem.MetricSystem.MICROMETER)
+        self._window.setUnit(MetricSystem.MICROMETER)
         self.assertEqual(
             self._window.getValues(),
-            (0.02, 0.0006, 0.001, metricsystem.MetricSystem.METER),
+            (0.02, 0.0006, 0.001, MetricSystem.METER),
         )
         self.assertEqual(
             self._window._dim0ValueQLE.value(),
-            20
-            * metricsystem.MetricSystem.MILLIMETER.value
-            / metricsystem.MetricSystem.MICROMETER.value,
+            20 * MetricSystem.MILLIMETER.value / MetricSystem.MICROMETER.value,
         )
         self._window._dim2ValueQLE.setValue(500)
         self._window._dim2ValueQLE.editingFinished.emit()
         self.qapp.processEvents()
         self.assertEqual(
             self._window.getValues(),
-            (0.02, 0.0006, 0.0005, metricsystem.MetricSystem.METER),
+            (0.02, 0.0006, 0.0005, MetricSystem.METER),
         )
 
     def testConstructorWithColors(self):

tomwer/gui/reconstruction/{test → tests}/test_sadeltabeta.py

@@ -1,30 +1,5 @@
 # coding: utf-8
-# /*##########################################################################
-#
-# Copyright (c) 2017-2019 European Synchrotron Radiation Facility
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-# ###########################################################################*/
-__authors__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "09/06/2021"
+from __future__ import annotations
 
 
 import os

tomwer/gui/samplemoved/__init__.py

@@ -1,34 +1,6 @@
-# /*##########################################################################
-# Copyright (C) 2017 European Synchrotron Radiation Facility
-#
-# This file is part of the PyMca X-ray Fluorescence Toolkit developed at
-# the ESRF by the Software group.
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-#############################################################################*/
 """Some widget construction to check if a sample moved"""
 
-__author__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "19/03/2018"
-
+from __future__ import annotations
 
 import logging
 import weakref
@@ -169,7 +141,7 @@ class SampleMovedWidget(qt.QMainWindow):
 
         images value can be str (path to the file) or data
 
-        :param dict images: images to set. key is index or file name, value
+        :param images: images to set. key is index or file name, value
                             the image.
         """
         self.clear()

tomwer/gui/samplemoved/selectiontable.py

@@ -1,34 +1,6 @@
-# /*##########################################################################
-# Copyright (C) 2017 European Synchrotron Radiation Facility
-#
-# This file is part of the PyMca X-ray Fluorescence Toolkit developed at
-# the ESRF by the Software group.
-#
-# Permission is hereby granted, free of charge, to any person obtaining a copy
-# of this software and associated documentation files (the "Software"), to deal
-# in the Software without restriction, including without limitation the rights
-# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
-# copies of the Software, and to permit persons to whom the Software is
-# furnished to do so, subject to the following conditions:
-#
-# The above copyright notice and this permission notice shall be included in
-# all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
-# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
-# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
-# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
-# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-# THE SOFTWARE.
-#
-#############################################################################*/
 """Some widget construction to check if a sample moved"""
 
-__author__ = ["H. Payno"]
-__license__ = "MIT"
-__date__ = "17/08/2021"
-
+from __future__ import annotations
 
 import functools
 import logging
@@ -81,13 +53,11 @@ class SelectionTable(qt.QTableWidget):
             for imgFrmFile in imgFile.getImages(_load=False):
                 self.addUrl(imgFrmFile.url, **kwargs)
 
-    def addUrl(self, url, **kwargs):
+    def addUrl(self, url: DataUrl, **kwargs) -> int:
         """
 
-        :param url:
-        :param args:
+        :param url: DataUrl to add
         :return: index of the created items row
-        :rtype int
         """
         assert isinstance(url, DataUrl)
         row = self.rowCount()

tomwer/gui/settings.py

@@ -1,3 +1,6 @@
+"""gui settings
+"""
+
 from silx.gui import qt
 
 
@@ -6,3 +9,7 @@ Y_AXIS_DOWNWARD = True
 
 EDITING_BACKGROUND_COLOR = qt.QColor("#c3d0d6")
 """Background color used to notify the user that application waits end of edition before taking it into account"""
+
+TAB_LABEL_PLATFORM_SETTINGS = "platform settings (for local reconstruction)"
+
+TAB_LABEL_RECONSTRUCTION_SETTINGS = "reconstruction settings"