simstack 2.0.1__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (354) hide show
  1. simstack/__init__.py +0 -0
  2. simstack/_version.py +24 -0
  3. simstack/core/__init__.py +0 -0
  4. simstack/core/artifacts.py +406 -0
  5. simstack/core/asnyc_helper.py +14 -0
  6. simstack/core/config_file.py +60 -0
  7. simstack/core/context.py +283 -0
  8. simstack/core/definitions.py +22 -0
  9. simstack/core/engine.py +115 -0
  10. simstack/core/find_simstack_modules.py +41 -0
  11. simstack/core/hash.py +179 -0
  12. simstack/core/node.py +1137 -0
  13. simstack/core/node_claim.py +31 -0
  14. simstack/core/node_runner.py +362 -0
  15. simstack/core/process_results.py +102 -0
  16. simstack/core/recompute_artifacts.py +117 -0
  17. simstack/core/reset_db.py +12 -0
  18. simstack/core/resource_assignment.py +222 -0
  19. simstack/core/resources.py +90 -0
  20. simstack/core/route_table.py +24 -0
  21. simstack/core/run_docker.py +109 -0
  22. simstack/core/run_node.py +71 -0
  23. simstack/core/runner.py +169 -0
  24. simstack/core/services/__init__.py +11 -0
  25. simstack/core/services/base_service.py +191 -0
  26. simstack/core/services/file_transfer_service.py +117 -0
  27. simstack/core/services/git_restart_service.py +12 -0
  28. simstack/core/services/git_uv_update_service.py +105 -0
  29. simstack/core/services/node_execution_service.py +182 -0
  30. simstack/core/services/resource_branch_monitor_service.py +71 -0
  31. simstack/core/services/runner_cleanup_service.py +149 -0
  32. simstack/core/services/runner_manager.py +163 -0
  33. simstack/core/services/runner_status_service.py +10 -0
  34. simstack/core/services/slurm_status_service.py +67 -0
  35. simstack/core/services/stop_check_service.py +27 -0
  36. simstack/core/services/timeout_restart_service.py +26 -0
  37. simstack/core/simstack_result.py +39 -0
  38. simstack/core/submit_node.py +217 -0
  39. simstack/core/task_id.py +22 -0
  40. simstack/methods/__init__.py +0 -0
  41. simstack/methods/archive_files.py +292 -0
  42. simstack/methods/fire_and_forget_runner.py +113 -0
  43. simstack/methods/generate_test.py +125 -0
  44. simstack/methods/get_file.py +26 -0
  45. simstack/methods/mass_runner.py +154 -0
  46. simstack/methods/multiple_executor.py +307 -0
  47. simstack/methods/switch_git.py +16 -0
  48. simstack/methods/upload_helpers.py +81 -0
  49. simstack/models/__init__.py +74 -0
  50. simstack/models/array_list.py +21 -0
  51. simstack/models/array_storage.py +83 -0
  52. simstack/models/artifact_models.py +127 -0
  53. simstack/models/base_lists.py +51 -0
  54. simstack/models/base_types.py +209 -0
  55. simstack/models/charts_artifact.py +690 -0
  56. simstack/models/dataset.py +451 -0
  57. simstack/models/dataset_metadata.py +390 -0
  58. simstack/models/datasettuple.py +587 -0
  59. simstack/models/file_instance.py +150 -0
  60. simstack/models/file_list.py +45 -0
  61. simstack/models/files.py +424 -0
  62. simstack/models/fire_and_forget_result.py +19 -0
  63. simstack/models/images2d.py +113 -0
  64. simstack/models/log_entry_model.py +37 -0
  65. simstack/models/models.py +52 -0
  66. simstack/models/named_data_reference.py +36 -0
  67. simstack/models/node_registry.py +96 -0
  68. simstack/models/pandas_model.py +239 -0
  69. simstack/models/parameters.py +402 -0
  70. simstack/models/pickle_models.py +300 -0
  71. simstack/models/project.py +13 -0
  72. simstack/models/resource_assignment.py +170 -0
  73. simstack/models/resource_definition.py +125 -0
  74. simstack/models/runner_model.py +39 -0
  75. simstack/models/simple_table.py +79 -0
  76. simstack/models/simstack_model.py +97 -0
  77. simstack/models/slurm_info.py +17 -0
  78. simstack/models/table_artifact.py +87 -0
  79. simstack/models/tag.py +12 -0
  80. simstack/models/unused_test_file.py +5 -0
  81. simstack/simstack_marker.com +1 -0
  82. simstack/static/docs/.buildinfo +4 -0
  83. simstack/static/docs/_images/GUI Concept.webp +0 -0
  84. simstack/static/docs/_modules/index.html +434 -0
  85. simstack/static/docs/_modules/simstack/core/artifacts.html +743 -0
  86. simstack/static/docs/_modules/simstack/core/asnyc_helper.html +330 -0
  87. simstack/static/docs/_modules/simstack/core/config_file.html +379 -0
  88. simstack/static/docs/_modules/simstack/core/definitions.html +341 -0
  89. simstack/static/docs/_modules/simstack/core/engine.html +437 -0
  90. simstack/static/docs/_modules/simstack/core/find_simstack_modules.html +360 -0
  91. simstack/static/docs/_modules/simstack/core/hash.html +528 -0
  92. simstack/static/docs/_modules/simstack/core/node.html +1392 -0
  93. simstack/static/docs/_modules/simstack/core/node_claim.html +347 -0
  94. simstack/static/docs/_modules/simstack/core/node_runner.html +711 -0
  95. simstack/static/docs/_modules/simstack/core/process_results.html +418 -0
  96. simstack/static/docs/_modules/simstack/core/recompute_artifacts.html +433 -0
  97. simstack/static/docs/_modules/simstack/core/reset_db.html +328 -0
  98. simstack/static/docs/_modules/simstack/core/resource_assignment.html +553 -0
  99. simstack/static/docs/_modules/simstack/core/resources.html +424 -0
  100. simstack/static/docs/_modules/simstack/core/route_table.html +349 -0
  101. simstack/static/docs/_modules/simstack/core/run_docker.html +425 -0
  102. simstack/static/docs/_modules/simstack/core/run_node.html +390 -0
  103. simstack/static/docs/_modules/simstack/core/runner.html +491 -0
  104. simstack/static/docs/_modules/simstack/core/services/base_service.html +522 -0
  105. simstack/static/docs/_modules/simstack/core/services/file_transfer_service.html +436 -0
  106. simstack/static/docs/_modules/simstack/core/services/git_restart_service.html +331 -0
  107. simstack/static/docs/_modules/simstack/core/services/git_uv_update_service.html +427 -0
  108. simstack/static/docs/_modules/simstack/core/services/node_execution_service.html +507 -0
  109. simstack/static/docs/_modules/simstack/core/services/resource_branch_monitor_service.html +390 -0
  110. simstack/static/docs/_modules/simstack/core/services/runner_cleanup_service.html +468 -0
  111. simstack/static/docs/_modules/simstack/core/services/runner_manager.html +485 -0
  112. simstack/static/docs/_modules/simstack/core/services/runner_status_service.html +329 -0
  113. simstack/static/docs/_modules/simstack/core/services/slurm_status_service.html +386 -0
  114. simstack/static/docs/_modules/simstack/core/services/stop_check_service.html +346 -0
  115. simstack/static/docs/_modules/simstack/core/services/timeout_restart_service.html +345 -0
  116. simstack/static/docs/_modules/simstack/core/simstack_result.html +355 -0
  117. simstack/static/docs/_modules/simstack/core/submit_node.html +536 -0
  118. simstack/static/docs/_modules/simstack/core/task_id.html +344 -0
  119. simstack/static/docs/_modules/simstack/methods/archive_files.html +598 -0
  120. simstack/static/docs/_modules/simstack/methods/fire_and_forget_runner.html +432 -0
  121. simstack/static/docs/_modules/simstack/methods/generate_test.html +443 -0
  122. simstack/static/docs/_modules/simstack/methods/get_file.html +342 -0
  123. simstack/static/docs/_modules/simstack/methods/mass_runner.html +476 -0
  124. simstack/static/docs/_modules/simstack/methods/multiple_executor.html +674 -0
  125. simstack/static/docs/_modules/simstack/methods/switch_git.html +332 -0
  126. simstack/static/docs/_modules/simstack/methods/upload_helpers.html +403 -0
  127. simstack/static/docs/_modules/simstack/models/array_list.html +337 -0
  128. simstack/static/docs/_modules/simstack/models/array_storage.html +417 -0
  129. simstack/static/docs/_modules/simstack/models/base_lists.html +374 -0
  130. simstack/static/docs/_modules/simstack/models/base_types.html +588 -0
  131. simstack/static/docs/_modules/simstack/models/charts_artifact.html +1035 -0
  132. simstack/static/docs/_modules/simstack/models/dataset.html +866 -0
  133. simstack/static/docs/_modules/simstack/models/dataset_metadata.html +711 -0
  134. simstack/static/docs/_modules/simstack/models/datasettuple.html +1005 -0
  135. simstack/static/docs/_modules/simstack/models/file_instance.html +472 -0
  136. simstack/static/docs/_modules/simstack/models/file_list.html +367 -0
  137. simstack/static/docs/_modules/simstack/models/files.html +773 -0
  138. simstack/static/docs/_modules/simstack/models/fire_and_forget_result.html +335 -0
  139. simstack/static/docs/_modules/simstack/models/images2d.html +447 -0
  140. simstack/static/docs/_modules/simstack/models/log_entry_model.html +356 -0
  141. simstack/static/docs/_modules/simstack/models/models.html +374 -0
  142. simstack/static/docs/_modules/simstack/models/named_data_reference.html +355 -0
  143. simstack/static/docs/_modules/simstack/models/node_registry.html +415 -0
  144. simstack/static/docs/_modules/simstack/models/pandas_model.html +570 -0
  145. simstack/static/docs/_modules/simstack/models/parameters.html +739 -0
  146. simstack/static/docs/_modules/simstack/models/pickle_models.html +631 -0
  147. simstack/static/docs/_modules/simstack/models/project.html +329 -0
  148. simstack/static/docs/_modules/simstack/models/resource_assignment.html +501 -0
  149. simstack/static/docs/_modules/simstack/models/resource_definition.html +477 -0
  150. simstack/static/docs/_modules/simstack/models/runner_model.html +361 -0
  151. simstack/static/docs/_modules/simstack/models/simple_table.html +413 -0
  152. simstack/static/docs/_modules/simstack/models/simstack_model.html +416 -0
  153. simstack/static/docs/_modules/simstack/models/slurm_info.html +333 -0
  154. simstack/static/docs/_modules/simstack/models/table_artifact.html +406 -0
  155. simstack/static/docs/_modules/simstack/models/tag.html +328 -0
  156. simstack/static/docs/_modules/simstack/tables/model_table.html +519 -0
  157. simstack/static/docs/_modules/simstack/tables/node_children.html +538 -0
  158. simstack/static/docs/_modules/simstack/tables/node_table.html +854 -0
  159. simstack/static/docs/_modules/simstack/tables/table_builder.html +642 -0
  160. simstack/static/docs/_modules/simstack/util/async_zip_utils.html +337 -0
  161. simstack/static/docs/_modules/simstack/util/b64mixin.html +339 -0
  162. simstack/static/docs/_modules/simstack/util/cleaned_json_schema.html +336 -0
  163. simstack/static/docs/_modules/simstack/util/config_reader.html +498 -0
  164. simstack/static/docs/_modules/simstack/util/custom_model_dump.html +391 -0
  165. simstack/static/docs/_modules/simstack/util/database_information.html +488 -0
  166. simstack/static/docs/_modules/simstack/util/db.html +1392 -0
  167. simstack/static/docs/_modules/simstack/util/db_logger.html +448 -0
  168. simstack/static/docs/_modules/simstack/util/default_from_dict.html +376 -0
  169. simstack/static/docs/_modules/simstack/util/directory_iterator.html +553 -0
  170. simstack/static/docs/_modules/simstack/util/docstring_parser.html +526 -0
  171. simstack/static/docs/_modules/simstack/util/file_hashing.html +394 -0
  172. simstack/static/docs/_modules/simstack/util/file_transfer_client.html +791 -0
  173. simstack/static/docs/_modules/simstack/util/files.html +733 -0
  174. simstack/static/docs/_modules/simstack/util/find_python_files.html +349 -0
  175. simstack/static/docs/_modules/simstack/util/generate_ui_schema.html +396 -0
  176. simstack/static/docs/_modules/simstack/util/generic_list_mixin.html +487 -0
  177. simstack/static/docs/_modules/simstack/util/get_module_path.html +336 -0
  178. simstack/static/docs/_modules/simstack/util/git_pull.html +381 -0
  179. simstack/static/docs/_modules/simstack/util/git_repository_status.html +411 -0
  180. simstack/static/docs/_modules/simstack/util/import_module.html +377 -0
  181. simstack/static/docs/_modules/simstack/util/importer.html +637 -0
  182. simstack/static/docs/_modules/simstack/util/init_data_source.html +357 -0
  183. simstack/static/docs/_modules/simstack/util/make_graph.html +423 -0
  184. simstack/static/docs/_modules/simstack/util/make_table.html +1171 -0
  185. simstack/static/docs/_modules/simstack/util/mappings.html +378 -0
  186. simstack/static/docs/_modules/simstack/util/minimal_route_finder.html +388 -0
  187. simstack/static/docs/_modules/simstack/util/mock_db.html +472 -0
  188. simstack/static/docs/_modules/simstack/util/module_path_checker.html +354 -0
  189. simstack/static/docs/_modules/simstack/util/object_list_mixin.html +649 -0
  190. simstack/static/docs/_modules/simstack/util/path_manager.html +566 -0
  191. simstack/static/docs/_modules/simstack/util/project_root_finder.html +357 -0
  192. simstack/static/docs/_modules/simstack/util/queue_watcher.html +593 -0
  193. simstack/static/docs/_modules/simstack/util/resource_config.html +532 -0
  194. simstack/static/docs/_modules/simstack/util/route_finder.html +390 -0
  195. simstack/static/docs/_modules/simstack/util/runner_util.html +487 -0
  196. simstack/static/docs/_modules/simstack/util/runner_utils.html +468 -0
  197. simstack/static/docs/_modules/simstack/util/safe_code_executor.html +510 -0
  198. simstack/static/docs/_modules/simstack/util/sample_config.html +414 -0
  199. simstack/static/docs/_modules/simstack/util/sensitive_content_filter.html +364 -0
  200. simstack/static/docs/_modules/simstack/util/setup_logging.html +365 -0
  201. simstack/static/docs/_modules/simstack/util/submit_to_watchdog.html +425 -0
  202. simstack/static/docs/_modules/simstack/util/toml_reader.html +482 -0
  203. simstack/static/docs/_modules/simstack/util/transform_file_name.html +357 -0
  204. simstack/static/docs/_modules/simstack/util/ui_tools.html +541 -0
  205. simstack/static/docs/_sources/architecture.rst.txt +25 -0
  206. simstack/static/docs/_sources/array_lists.rst.txt +60 -0
  207. simstack/static/docs/_sources/ci_pipeline.rst.txt +34 -0
  208. simstack/static/docs/_sources/data.rst.txt +175 -0
  209. simstack/static/docs/_sources/database_migrations.rst.txt +310 -0
  210. simstack/static/docs/_sources/datasets.rst.txt +93 -0
  211. simstack/static/docs/_sources/developer_guide.rst.txt +25 -0
  212. simstack/static/docs/_sources/docker_nodes.rst.txt +149 -0
  213. simstack/static/docs/_sources/files.rst.txt +159 -0
  214. simstack/static/docs/_sources/fire_and_forget_runner.rst.txt +67 -0
  215. simstack/static/docs/_sources/index.rst.txt +25 -0
  216. simstack/static/docs/_sources/installation.rst.txt +213 -0
  217. simstack/static/docs/_sources/lists.rst.txt +111 -0
  218. simstack/static/docs/_sources/mass_runner.rst.txt +91 -0
  219. simstack/static/docs/_sources/misc.rst.txt +106 -0
  220. simstack/static/docs/_sources/overview.rst.txt +91 -0
  221. simstack/static/docs/_sources/recovery.rst.txt +38 -0
  222. simstack/static/docs/_sources/resource_config.rst.txt +141 -0
  223. simstack/static/docs/_sources/simstack/modules/modules.rst.txt +7 -0
  224. simstack/static/docs/_sources/simstack/modules/simstack.core.rst.txt +205 -0
  225. simstack/static/docs/_sources/simstack/modules/simstack.core.services.rst.txt +109 -0
  226. simstack/static/docs/_sources/simstack/modules/simstack.methods.rst.txt +77 -0
  227. simstack/static/docs/_sources/simstack/modules/simstack.models.rst.txt +261 -0
  228. simstack/static/docs/_sources/simstack/modules/simstack.rst.txt +22 -0
  229. simstack/static/docs/_sources/simstack/modules/simstack.tables.rst.txt +45 -0
  230. simstack/static/docs/_sources/simstack/modules/simstack.util.rst.txt +381 -0
  231. simstack/static/docs/_sources/submit.rst.txt +141 -0
  232. simstack/static/docs/_sources/tables.rst.txt +50 -0
  233. simstack/static/docs/_sources/testing_complex_nodes.rst.txt +92 -0
  234. simstack/static/docs/_sources/ui_documentation.rst.txt +272 -0
  235. simstack/static/docs/_sources/workflows.rst.txt +446 -0
  236. simstack/static/docs/_static/base-stemmer.js +476 -0
  237. simstack/static/docs/_static/basic.css +906 -0
  238. simstack/static/docs/_static/cobalt2-theme.css +1 -0
  239. simstack/static/docs/_static/debug.css +69 -0
  240. simstack/static/docs/_static/docs-build-badge.css +51 -0
  241. simstack/static/docs/_static/docs-build-badge.js +51 -0
  242. simstack/static/docs/_static/doctools.js +150 -0
  243. simstack/static/docs/_static/documentation_options.js +13 -0
  244. simstack/static/docs/_static/english-stemmer.js +1066 -0
  245. simstack/static/docs/_static/file.png +0 -0
  246. simstack/static/docs/_static/language_data.js +13 -0
  247. simstack/static/docs/_static/minus.png +0 -0
  248. simstack/static/docs/_static/plus.png +0 -0
  249. simstack/static/docs/_static/pygments.css +250 -0
  250. simstack/static/docs/_static/scripts/furo-extensions.js +0 -0
  251. simstack/static/docs/_static/scripts/furo.js +3 -0
  252. simstack/static/docs/_static/scripts/furo.js.LICENSE.txt +7 -0
  253. simstack/static/docs/_static/scripts/furo.js.map +1 -0
  254. simstack/static/docs/_static/searchtools.js +693 -0
  255. simstack/static/docs/_static/skeleton.css +296 -0
  256. simstack/static/docs/_static/sphinx_highlight.js +159 -0
  257. simstack/static/docs/_static/styles/furo-extensions.css +2 -0
  258. simstack/static/docs/_static/styles/furo-extensions.css.map +1 -0
  259. simstack/static/docs/_static/styles/furo.css +2 -0
  260. simstack/static/docs/_static/styles/furo.css.map +1 -0
  261. simstack/static/docs/architecture.html +340 -0
  262. simstack/static/docs/array_lists.html +678 -0
  263. simstack/static/docs/ci_pipeline.html +385 -0
  264. simstack/static/docs/data.html +545 -0
  265. simstack/static/docs/database_migrations.html +652 -0
  266. simstack/static/docs/datasets.html +1268 -0
  267. simstack/static/docs/developer_guide.html +359 -0
  268. simstack/static/docs/docker_nodes.html +503 -0
  269. simstack/static/docs/files.html +718 -0
  270. simstack/static/docs/fire_and_forget_runner.html +641 -0
  271. simstack/static/docs/genindex.html +6390 -0
  272. simstack/static/docs/index.html +516 -0
  273. simstack/static/docs/installation.html +553 -0
  274. simstack/static/docs/lists.html +478 -0
  275. simstack/static/docs/mass_runner.html +481 -0
  276. simstack/static/docs/misc.html +454 -0
  277. simstack/static/docs/objects.inv +0 -0
  278. simstack/static/docs/overview.html +469 -0
  279. simstack/static/docs/py-modindex.html +1111 -0
  280. simstack/static/docs/recovery.html +371 -0
  281. simstack/static/docs/resource_config.html +590 -0
  282. simstack/static/docs/search.html +327 -0
  283. simstack/static/docs/searchindex.js +1 -0
  284. simstack/static/docs/simstack/modules/modules.html +489 -0
  285. simstack/static/docs/simstack/modules/simstack.core.html +1883 -0
  286. simstack/static/docs/simstack/modules/simstack.core.services.html +698 -0
  287. simstack/static/docs/simstack/modules/simstack.html +3060 -0
  288. simstack/static/docs/simstack/modules/simstack.methods.html +1150 -0
  289. simstack/static/docs/simstack/modules/simstack.models.html +13113 -0
  290. simstack/static/docs/simstack/modules/simstack.tables.html +635 -0
  291. simstack/static/docs/simstack/modules/simstack.util.html +3320 -0
  292. simstack/static/docs/submit.html +487 -0
  293. simstack/static/docs/tables.html +539 -0
  294. simstack/static/docs/testing_complex_nodes.html +458 -0
  295. simstack/static/docs/ui_documentation.html +788 -0
  296. simstack/static/docs/workflows.html +766 -0
  297. simstack/tables/__init__.py +0 -0
  298. simstack/tables/model_table.py +191 -0
  299. simstack/tables/node_children.py +219 -0
  300. simstack/tables/node_table.py +517 -0
  301. simstack/tables/table_builder.py +314 -0
  302. simstack/util/__init__.py +0 -0
  303. simstack/util/async_zip_utils.py +18 -0
  304. simstack/util/b64mixin.py +23 -0
  305. simstack/util/cleaned_json_schema.py +20 -0
  306. simstack/util/config_reader.py +179 -0
  307. simstack/util/custom_model_dump.py +75 -0
  308. simstack/util/database_information.py +160 -0
  309. simstack/util/db.py +1013 -0
  310. simstack/util/db_logger.py +117 -0
  311. simstack/util/default_from_dict.py +57 -0
  312. simstack/util/directory_iterator.py +216 -0
  313. simstack/util/docstring_parser.py +186 -0
  314. simstack/util/file_hashing.py +72 -0
  315. simstack/util/file_transfer_client.py +427 -0
  316. simstack/util/files.py +396 -0
  317. simstack/util/find_python_files.py +33 -0
  318. simstack/util/generate_ui_schema.py +80 -0
  319. simstack/util/generic_list_mixin.py +120 -0
  320. simstack/util/geometry_utils.py +118 -0
  321. simstack/util/get_module_path.py +20 -0
  322. simstack/util/git_pull.py +65 -0
  323. simstack/util/git_repository_status.py +95 -0
  324. simstack/util/import_module.py +63 -0
  325. simstack/util/importer.py +312 -0
  326. simstack/util/init_data_source.py +41 -0
  327. simstack/util/make_graph.py +107 -0
  328. simstack/util/make_table.py +837 -0
  329. simstack/util/mappings.py +41 -0
  330. simstack/util/minimal_route_finder.py +72 -0
  331. simstack/util/mock_db.py +144 -0
  332. simstack/util/module_path_checker.py +38 -0
  333. simstack/util/object_list_mixin.py +282 -0
  334. simstack/util/path_manager.py +223 -0
  335. simstack/util/project_root_finder.py +41 -0
  336. simstack/util/queue_watcher.py +262 -0
  337. simstack/util/resource_config.py +198 -0
  338. simstack/util/route_finder.py +74 -0
  339. simstack/util/runner_util.py +166 -0
  340. simstack/util/runner_utils.py +143 -0
  341. simstack/util/safe_code_executor.py +194 -0
  342. simstack/util/sample_config.py +98 -0
  343. simstack/util/sensitive_content_filter.py +48 -0
  344. simstack/util/setup_logging.py +49 -0
  345. simstack/util/submit_to_watchdog.py +106 -0
  346. simstack/util/toml_reader.py +142 -0
  347. simstack/util/transform_file_name.py +41 -0
  348. simstack/util/ui_tools.py +213 -0
  349. simstack-2.0.1.dist-info/METADATA +454 -0
  350. simstack-2.0.1.dist-info/RECORD +354 -0
  351. simstack-2.0.1.dist-info/WHEEL +5 -0
  352. simstack-2.0.1.dist-info/entry_points.txt +12 -0
  353. simstack-2.0.1.dist-info/licenses/LICENSE +21 -0
  354. simstack-2.0.1.dist-info/top_level.txt +1 -0
simstack/static/docs/_sources/simstack/modules/simstack.core.rst.txt ADDED
@@ -0,0 +1,205 @@
1
+ simstack.core package
2
+ =====================
3
+
4
+ Subpackages
5
+ -----------
6
+
7
+ .. toctree::
8
+ :maxdepth: 4
9
+
10
+ simstack.core.services
11
+
12
+ Submodules
13
+ ----------
14
+
15
+ simstack.core.artifacts module
16
+ ------------------------------
17
+
18
+ .. automodule:: simstack.core.artifacts
19
+ :members:
20
+ :show-inheritance:
21
+ :undoc-members:
22
+
23
+ simstack.core.asnyc\_helper module
24
+ ----------------------------------
25
+
26
+ .. automodule:: simstack.core.asnyc_helper
27
+ :members:
28
+ :show-inheritance:
29
+ :undoc-members:
30
+
31
+ simstack.core.config\_file module
32
+ ---------------------------------
33
+
34
+ .. automodule:: simstack.core.config_file
35
+ :members:
36
+ :show-inheritance:
37
+ :undoc-members:
38
+
39
+ simstack.core.context module
40
+ ----------------------------
41
+
42
+ .. automodule:: simstack.core.context
43
+ :members:
44
+ :show-inheritance:
45
+ :undoc-members:
46
+
47
+ simstack.core.definitions module
48
+ --------------------------------
49
+
50
+ .. automodule:: simstack.core.definitions
51
+ :members:
52
+ :show-inheritance:
53
+ :undoc-members:
54
+
55
+ simstack.core.engine module
56
+ ---------------------------
57
+
58
+ .. automodule:: simstack.core.engine
59
+ :members:
60
+ :show-inheritance:
61
+ :undoc-members:
62
+
63
+ simstack.core.find\_simstack\_modules module
64
+ --------------------------------------------
65
+
66
+ .. automodule:: simstack.core.find_simstack_modules
67
+ :members:
68
+ :show-inheritance:
69
+ :undoc-members:
70
+
71
+ simstack.core.hash module
72
+ -------------------------
73
+
74
+ .. automodule:: simstack.core.hash
75
+ :members:
76
+ :show-inheritance:
77
+ :undoc-members:
78
+
79
+ simstack.core.node module
80
+ -------------------------
81
+
82
+ .. automodule:: simstack.core.node
83
+ :members:
84
+ :show-inheritance:
85
+ :undoc-members:
86
+
87
+ simstack.core.node\_claim module
88
+ --------------------------------
89
+
90
+ .. automodule:: simstack.core.node_claim
91
+ :members:
92
+ :show-inheritance:
93
+ :undoc-members:
94
+
95
+ simstack.core.node\_runner module
96
+ ---------------------------------
97
+
98
+ .. automodule:: simstack.core.node_runner
99
+ :members:
100
+ :show-inheritance:
101
+ :undoc-members:
102
+
103
+ simstack.core.process\_results module
104
+ -------------------------------------
105
+
106
+ .. automodule:: simstack.core.process_results
107
+ :members:
108
+ :show-inheritance:
109
+ :undoc-members:
110
+
111
+ simstack.core.recompute\_artifacts module
112
+ -----------------------------------------
113
+
114
+ .. automodule:: simstack.core.recompute_artifacts
115
+ :members:
116
+ :show-inheritance:
117
+ :undoc-members:
118
+
119
+ simstack.core.reset\_db module
120
+ ------------------------------
121
+
122
+ .. automodule:: simstack.core.reset_db
123
+ :members:
124
+ :show-inheritance:
125
+ :undoc-members:
126
+
127
+ simstack.core.resource\_assignment module
128
+ -----------------------------------------
129
+
130
+ .. automodule:: simstack.core.resource_assignment
131
+ :members:
132
+ :show-inheritance:
133
+ :undoc-members:
134
+
135
+ simstack.core.resources module
136
+ ------------------------------
137
+
138
+ .. automodule:: simstack.core.resources
139
+ :members:
140
+ :show-inheritance:
141
+ :undoc-members:
142
+
143
+ simstack.core.route\_table module
144
+ ---------------------------------
145
+
146
+ .. automodule:: simstack.core.route_table
147
+ :members:
148
+ :show-inheritance:
149
+ :undoc-members:
150
+
151
+ simstack.core.run\_docker module
152
+ --------------------------------
153
+
154
+ .. automodule:: simstack.core.run_docker
155
+ :members:
156
+ :show-inheritance:
157
+ :undoc-members:
158
+
159
+ simstack.core.run\_node module
160
+ ------------------------------
161
+
162
+ .. automodule:: simstack.core.run_node
163
+ :members:
164
+ :show-inheritance:
165
+ :undoc-members:
166
+
167
+ simstack.core.runner module
168
+ ---------------------------
169
+
170
+ .. automodule:: simstack.core.runner
171
+ :members:
172
+ :show-inheritance:
173
+ :undoc-members:
174
+
175
+ simstack.core.simstack\_result module
176
+ -------------------------------------
177
+
178
+ .. automodule:: simstack.core.simstack_result
179
+ :members:
180
+ :show-inheritance:
181
+ :undoc-members:
182
+
183
+ simstack.core.submit\_node module
184
+ ---------------------------------
185
+
186
+ .. automodule:: simstack.core.submit_node
187
+ :members:
188
+ :show-inheritance:
189
+ :undoc-members:
190
+
191
+ simstack.core.task\_id module
192
+ -----------------------------
193
+
194
+ .. automodule:: simstack.core.task_id
195
+ :members:
196
+ :show-inheritance:
197
+ :undoc-members:
198
+
199
+ Module contents
200
+ ---------------
201
+
202
+ .. automodule:: simstack.core
203
+ :members:
204
+ :show-inheritance:
205
+ :undoc-members:
simstack/static/docs/_sources/simstack/modules/simstack.core.services.rst.txt ADDED
@@ -0,0 +1,109 @@
1
+ simstack.core.services package
2
+ ==============================
3
+
4
+ Submodules
5
+ ----------
6
+
7
+ simstack.core.services.base\_service module
8
+ -------------------------------------------
9
+
10
+ .. automodule:: simstack.core.services.base_service
11
+ :members:
12
+ :show-inheritance:
13
+ :undoc-members:
14
+
15
+ simstack.core.services.file\_transfer\_service module
16
+ -----------------------------------------------------
17
+
18
+ .. automodule:: simstack.core.services.file_transfer_service
19
+ :members:
20
+ :show-inheritance:
21
+ :undoc-members:
22
+
23
+ simstack.core.services.git\_restart\_service module
24
+ ---------------------------------------------------
25
+
26
+ .. automodule:: simstack.core.services.git_restart_service
27
+ :members:
28
+ :show-inheritance:
29
+ :undoc-members:
30
+
31
+ simstack.core.services.git\_uv\_update\_service module
32
+ ------------------------------------------------------
33
+
34
+ .. automodule:: simstack.core.services.git_uv_update_service
35
+ :members:
36
+ :show-inheritance:
37
+ :undoc-members:
38
+
39
+ simstack.core.services.node\_execution\_service module
40
+ ------------------------------------------------------
41
+
42
+ .. automodule:: simstack.core.services.node_execution_service
43
+ :members:
44
+ :show-inheritance:
45
+ :undoc-members:
46
+
47
+ simstack.core.services.resource\_branch\_monitor\_service module
48
+ ----------------------------------------------------------------
49
+
50
+ .. automodule:: simstack.core.services.resource_branch_monitor_service
51
+ :members:
52
+ :show-inheritance:
53
+ :undoc-members:
54
+
55
+ simstack.core.services.runner\_cleanup\_service module
56
+ ------------------------------------------------------
57
+
58
+ .. automodule:: simstack.core.services.runner_cleanup_service
59
+ :members:
60
+ :show-inheritance:
61
+ :undoc-members:
62
+
63
+ simstack.core.services.runner\_manager module
64
+ ---------------------------------------------
65
+
66
+ .. automodule:: simstack.core.services.runner_manager
67
+ :members:
68
+ :show-inheritance:
69
+ :undoc-members:
70
+
71
+ simstack.core.services.runner\_status\_service module
72
+ -----------------------------------------------------
73
+
74
+ .. automodule:: simstack.core.services.runner_status_service
75
+ :members:
76
+ :show-inheritance:
77
+ :undoc-members:
78
+
79
+ simstack.core.services.slurm\_status\_service module
80
+ ----------------------------------------------------
81
+
82
+ .. automodule:: simstack.core.services.slurm_status_service
83
+ :members:
84
+ :show-inheritance:
85
+ :undoc-members:
86
+
87
+ simstack.core.services.stop\_check\_service module
88
+ --------------------------------------------------
89
+
90
+ .. automodule:: simstack.core.services.stop_check_service
91
+ :members:
92
+ :show-inheritance:
93
+ :undoc-members:
94
+
95
+ simstack.core.services.timeout\_restart\_service module
96
+ -------------------------------------------------------
97
+
98
+ .. automodule:: simstack.core.services.timeout_restart_service
99
+ :members:
100
+ :show-inheritance:
101
+ :undoc-members:
102
+
103
+ Module contents
104
+ ---------------
105
+
106
+ .. automodule:: simstack.core.services
107
+ :members:
108
+ :show-inheritance:
109
+ :undoc-members:
simstack/static/docs/_sources/simstack/modules/simstack.methods.rst.txt ADDED
@@ -0,0 +1,77 @@
1
+ simstack.methods package
2
+ ========================
3
+
4
+ Submodules
5
+ ----------
6
+
7
+ simstack.methods.archive\_files module
8
+ --------------------------------------
9
+
10
+ .. automodule:: simstack.methods.archive_files
11
+ :members:
12
+ :show-inheritance:
13
+ :undoc-members:
14
+
15
+ simstack.methods.fire\_and\_forget\_runner module
16
+ -------------------------------------------------
17
+
18
+ .. automodule:: simstack.methods.fire_and_forget_runner
19
+ :members:
20
+ :show-inheritance:
21
+ :undoc-members:
22
+
23
+ simstack.methods.generate\_test module
24
+ --------------------------------------
25
+
26
+ .. automodule:: simstack.methods.generate_test
27
+ :members:
28
+ :show-inheritance:
29
+ :undoc-members:
30
+
31
+ simstack.methods.get\_file module
32
+ ---------------------------------
33
+
34
+ .. automodule:: simstack.methods.get_file
35
+ :members:
36
+ :show-inheritance:
37
+ :undoc-members:
38
+
39
+ simstack.methods.mass\_runner module
40
+ ------------------------------------
41
+
42
+ .. automodule:: simstack.methods.mass_runner
43
+ :members:
44
+ :show-inheritance:
45
+ :undoc-members:
46
+
47
+ simstack.methods.multiple\_executor module
48
+ ------------------------------------------
49
+
50
+ .. automodule:: simstack.methods.multiple_executor
51
+ :members:
52
+ :show-inheritance:
53
+ :undoc-members:
54
+
55
+ simstack.methods.switch\_git module
56
+ -----------------------------------
57
+
58
+ .. automodule:: simstack.methods.switch_git
59
+ :members:
60
+ :show-inheritance:
61
+ :undoc-members:
62
+
63
+ simstack.methods.upload\_helpers module
64
+ ---------------------------------------
65
+
66
+ .. automodule:: simstack.methods.upload_helpers
67
+ :members:
68
+ :show-inheritance:
69
+ :undoc-members:
70
+
71
+ Module contents
72
+ ---------------
73
+
74
+ .. automodule:: simstack.methods
75
+ :members:
76
+ :show-inheritance:
77
+ :undoc-members:
simstack/static/docs/_sources/simstack/modules/simstack.models.rst.txt ADDED
@@ -0,0 +1,261 @@
1
+ simstack.models package
2
+ =======================
3
+
4
+ Submodules
5
+ ----------
6
+
7
+ simstack.models.array\_list module
8
+ ----------------------------------
9
+
10
+ .. automodule:: simstack.models.array_list
11
+ :members:
12
+ :show-inheritance:
13
+ :undoc-members:
14
+
15
+ simstack.models.array\_storage module
16
+ -------------------------------------
17
+
18
+ .. automodule:: simstack.models.array_storage
19
+ :members:
20
+ :show-inheritance:
21
+ :undoc-members:
22
+
23
+ simstack.models.artifact\_models module
24
+ ---------------------------------------
25
+
26
+ .. automodule:: simstack.models.artifact_models
27
+ :members:
28
+ :show-inheritance:
29
+ :undoc-members:
30
+
31
+ simstack.models.base\_lists module
32
+ ----------------------------------
33
+
34
+ .. automodule:: simstack.models.base_lists
35
+ :members:
36
+ :show-inheritance:
37
+ :undoc-members:
38
+
39
+ simstack.models.base\_types module
40
+ ----------------------------------
41
+
42
+ .. automodule:: simstack.models.base_types
43
+ :members:
44
+ :show-inheritance:
45
+ :undoc-members:
46
+
47
+ simstack.models.charts\_artifact module
48
+ ---------------------------------------
49
+
50
+ .. automodule:: simstack.models.charts_artifact
51
+ :members:
52
+ :show-inheritance:
53
+ :undoc-members:
54
+
55
+ simstack.models.dataset module
56
+ ------------------------------
57
+
58
+ .. automodule:: simstack.models.dataset
59
+ :members:
60
+ :show-inheritance:
61
+ :undoc-members:
62
+
63
+ simstack.models.dataset\_metadata module
64
+ ----------------------------------------
65
+
66
+ .. automodule:: simstack.models.dataset_metadata
67
+ :members:
68
+ :show-inheritance:
69
+ :undoc-members:
70
+
71
+ simstack.models.datasettuple module
72
+ -----------------------------------
73
+
74
+ .. automodule:: simstack.models.datasettuple
75
+ :members:
76
+ :show-inheritance:
77
+ :undoc-members:
78
+
79
+ simstack.models.file\_instance module
80
+ -------------------------------------
81
+
82
+ .. automodule:: simstack.models.file_instance
83
+ :members:
84
+ :show-inheritance:
85
+ :undoc-members:
86
+
87
+ simstack.models.file\_list module
88
+ ---------------------------------
89
+
90
+ .. automodule:: simstack.models.file_list
91
+ :members:
92
+ :show-inheritance:
93
+ :undoc-members:
94
+
95
+ simstack.models.files module
96
+ ----------------------------
97
+
98
+ .. automodule:: simstack.models.files
99
+ :members:
100
+ :show-inheritance:
101
+ :undoc-members:
102
+
103
+ simstack.models.fire\_and\_forget\_result module
104
+ ------------------------------------------------
105
+
106
+ .. automodule:: simstack.models.fire_and_forget_result
107
+ :members:
108
+ :show-inheritance:
109
+ :undoc-members:
110
+
111
+ simstack.models.images2d module
112
+ -------------------------------
113
+
114
+ .. automodule:: simstack.models.images2d
115
+ :members:
116
+ :show-inheritance:
117
+ :undoc-members:
118
+
119
+ simstack.models.log\_entry\_model module
120
+ ----------------------------------------
121
+
122
+ .. automodule:: simstack.models.log_entry_model
123
+ :members:
124
+ :show-inheritance:
125
+ :undoc-members:
126
+
127
+ simstack.models.models module
128
+ -----------------------------
129
+
130
+ .. automodule:: simstack.models.models
131
+ :members:
132
+ :show-inheritance:
133
+ :undoc-members:
134
+
135
+ simstack.models.named\_data\_reference module
136
+ ---------------------------------------------
137
+
138
+ .. automodule:: simstack.models.named_data_reference
139
+ :members:
140
+ :show-inheritance:
141
+ :undoc-members:
142
+
143
+ simstack.models.node\_registry module
144
+ -------------------------------------
145
+
146
+ .. automodule:: simstack.models.node_registry
147
+ :members:
148
+ :show-inheritance:
149
+ :undoc-members:
150
+
151
+ simstack.models.pandas\_model module
152
+ ------------------------------------
153
+
154
+ .. automodule:: simstack.models.pandas_model
155
+ :members:
156
+ :show-inheritance:
157
+ :undoc-members:
158
+
159
+ simstack.models.parameters module
160
+ ---------------------------------
161
+
162
+ .. automodule:: simstack.models.parameters
163
+ :members:
164
+ :show-inheritance:
165
+ :undoc-members:
166
+
167
+ simstack.models.pickle\_models module
168
+ -------------------------------------
169
+
170
+ .. automodule:: simstack.models.pickle_models
171
+ :members:
172
+ :show-inheritance:
173
+ :undoc-members:
174
+
175
+ simstack.models.project module
176
+ ------------------------------
177
+
178
+ .. automodule:: simstack.models.project
179
+ :members:
180
+ :show-inheritance:
181
+ :undoc-members:
182
+
183
+ simstack.models.resource\_assignment module
184
+ -------------------------------------------
185
+
186
+ .. automodule:: simstack.models.resource_assignment
187
+ :members:
188
+ :show-inheritance:
189
+ :undoc-members:
190
+
191
+ simstack.models.resource\_definition module
192
+ -------------------------------------------
193
+
194
+ .. automodule:: simstack.models.resource_definition
195
+ :members:
196
+ :show-inheritance:
197
+ :undoc-members:
198
+
199
+ simstack.models.runner\_model module
200
+ ------------------------------------
201
+
202
+ .. automodule:: simstack.models.runner_model
203
+ :members:
204
+ :show-inheritance:
205
+ :undoc-members:
206
+
207
+ simstack.models.simple\_table module
208
+ ------------------------------------
209
+
210
+ .. automodule:: simstack.models.simple_table
211
+ :members:
212
+ :show-inheritance:
213
+ :undoc-members:
214
+
215
+ simstack.models.simstack\_model module
216
+ --------------------------------------
217
+
218
+ .. automodule:: simstack.models.simstack_model
219
+ :members:
220
+ :show-inheritance:
221
+ :undoc-members:
222
+
223
+ simstack.models.slurm\_info module
224
+ ----------------------------------
225
+
226
+ .. automodule:: simstack.models.slurm_info
227
+ :members:
228
+ :show-inheritance:
229
+ :undoc-members:
230
+
231
+ simstack.models.table\_artifact module
232
+ --------------------------------------
233
+
234
+ .. automodule:: simstack.models.table_artifact
235
+ :members:
236
+ :show-inheritance:
237
+ :undoc-members:
238
+
239
+ simstack.models.tag module
240
+ --------------------------
241
+
242
+ .. automodule:: simstack.models.tag
243
+ :members:
244
+ :show-inheritance:
245
+ :undoc-members:
246
+
247
+ simstack.models.unused\_test\_file module
248
+ -----------------------------------------
249
+
250
+ .. automodule:: simstack.models.unused_test_file
251
+ :members:
252
+ :show-inheritance:
253
+ :undoc-members:
254
+
255
+ Module contents
256
+ ---------------
257
+
258
+ .. automodule:: simstack.models
259
+ :members:
260
+ :show-inheritance:
261
+ :undoc-members:
simstack/static/docs/_sources/simstack/modules/simstack.rst.txt ADDED
@@ -0,0 +1,22 @@
1
+ simstack package
2
+ ================
3
+
4
+ Subpackages
5
+ -----------
6
+
7
+ .. toctree::
8
+ :maxdepth: 4
9
+
10
+ simstack.core
11
+ simstack.methods
12
+ simstack.models
13
+ simstack.tables
14
+ simstack.util
15
+
16
+ Module contents
17
+ ---------------
18
+
19
+ .. automodule:: simstack
20
+ :members:
21
+ :show-inheritance:
22
+ :undoc-members:
simstack/static/docs/_sources/simstack/modules/simstack.tables.rst.txt ADDED
@@ -0,0 +1,45 @@
1
+ simstack.tables package
2
+ =======================
3
+
4
+ Submodules
5
+ ----------
6
+
7
+ simstack.tables.model\_table module
8
+ -----------------------------------
9
+
10
+ .. automodule:: simstack.tables.model_table
11
+ :members:
12
+ :show-inheritance:
13
+ :undoc-members:
14
+
15
+ simstack.tables.node\_children module
16
+ -------------------------------------
17
+
18
+ .. automodule:: simstack.tables.node_children
19
+ :members:
20
+ :show-inheritance:
21
+ :undoc-members:
22
+
23
+ simstack.tables.node\_table module
24
+ ----------------------------------
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+
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+ .. automodule:: simstack.tables.node_table
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+ :members:
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+ :show-inheritance:
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+ :undoc-members:
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+
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+ simstack.tables.table\_builder module
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+ -------------------------------------
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+
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+ .. automodule:: simstack.tables.table_builder
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+ :members:
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+ :show-inheritance:
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+ :undoc-members:
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+
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+ Module contents
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+ ---------------
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+
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+ .. automodule:: simstack.tables
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+ :members:
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+ :show-inheritance:
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+ :undoc-members: