simstack 2.0.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- simstack/__init__.py +0 -0
- simstack/_version.py +24 -0
- simstack/core/__init__.py +0 -0
- simstack/core/artifacts.py +406 -0
- simstack/core/asnyc_helper.py +14 -0
- simstack/core/config_file.py +60 -0
- simstack/core/context.py +283 -0
- simstack/core/definitions.py +22 -0
- simstack/core/engine.py +115 -0
- simstack/core/find_simstack_modules.py +41 -0
- simstack/core/hash.py +179 -0
- simstack/core/node.py +1137 -0
- simstack/core/node_claim.py +31 -0
- simstack/core/node_runner.py +362 -0
- simstack/core/process_results.py +102 -0
- simstack/core/recompute_artifacts.py +117 -0
- simstack/core/reset_db.py +12 -0
- simstack/core/resource_assignment.py +222 -0
- simstack/core/resources.py +90 -0
- simstack/core/route_table.py +24 -0
- simstack/core/run_docker.py +109 -0
- simstack/core/run_node.py +71 -0
- simstack/core/runner.py +169 -0
- simstack/core/services/__init__.py +11 -0
- simstack/core/services/base_service.py +191 -0
- simstack/core/services/file_transfer_service.py +117 -0
- simstack/core/services/git_restart_service.py +12 -0
- simstack/core/services/git_uv_update_service.py +105 -0
- simstack/core/services/node_execution_service.py +182 -0
- simstack/core/services/resource_branch_monitor_service.py +71 -0
- simstack/core/services/runner_cleanup_service.py +149 -0
- simstack/core/services/runner_manager.py +163 -0
- simstack/core/services/runner_status_service.py +10 -0
- simstack/core/services/slurm_status_service.py +67 -0
- simstack/core/services/stop_check_service.py +27 -0
- simstack/core/services/timeout_restart_service.py +26 -0
- simstack/core/simstack_result.py +39 -0
- simstack/core/submit_node.py +217 -0
- simstack/core/task_id.py +22 -0
- simstack/methods/__init__.py +0 -0
- simstack/methods/archive_files.py +292 -0
- simstack/methods/fire_and_forget_runner.py +113 -0
- simstack/methods/generate_test.py +125 -0
- simstack/methods/get_file.py +26 -0
- simstack/methods/mass_runner.py +154 -0
- simstack/methods/multiple_executor.py +307 -0
- simstack/methods/switch_git.py +16 -0
- simstack/methods/upload_helpers.py +81 -0
- simstack/models/__init__.py +74 -0
- simstack/models/array_list.py +21 -0
- simstack/models/array_storage.py +83 -0
- simstack/models/artifact_models.py +127 -0
- simstack/models/base_lists.py +51 -0
- simstack/models/base_types.py +209 -0
- simstack/models/charts_artifact.py +690 -0
- simstack/models/dataset.py +451 -0
- simstack/models/dataset_metadata.py +390 -0
- simstack/models/datasettuple.py +587 -0
- simstack/models/file_instance.py +150 -0
- simstack/models/file_list.py +45 -0
- simstack/models/files.py +424 -0
- simstack/models/fire_and_forget_result.py +19 -0
- simstack/models/images2d.py +113 -0
- simstack/models/log_entry_model.py +37 -0
- simstack/models/models.py +52 -0
- simstack/models/named_data_reference.py +36 -0
- simstack/models/node_registry.py +96 -0
- simstack/models/pandas_model.py +239 -0
- simstack/models/parameters.py +402 -0
- simstack/models/pickle_models.py +300 -0
- simstack/models/project.py +13 -0
- simstack/models/resource_assignment.py +170 -0
- simstack/models/resource_definition.py +125 -0
- simstack/models/runner_model.py +39 -0
- simstack/models/simple_table.py +79 -0
- simstack/models/simstack_model.py +97 -0
- simstack/models/slurm_info.py +17 -0
- simstack/models/table_artifact.py +87 -0
- simstack/models/tag.py +12 -0
- simstack/models/unused_test_file.py +5 -0
- simstack/simstack_marker.com +1 -0
- simstack/static/docs/.buildinfo +4 -0
- simstack/static/docs/_images/GUI Concept.webp +0 -0
- simstack/static/docs/_modules/index.html +434 -0
- simstack/static/docs/_modules/simstack/core/artifacts.html +743 -0
- simstack/static/docs/_modules/simstack/core/asnyc_helper.html +330 -0
- simstack/static/docs/_modules/simstack/core/config_file.html +379 -0
- simstack/static/docs/_modules/simstack/core/definitions.html +341 -0
- simstack/static/docs/_modules/simstack/core/engine.html +437 -0
- simstack/static/docs/_modules/simstack/core/find_simstack_modules.html +360 -0
- simstack/static/docs/_modules/simstack/core/hash.html +528 -0
- simstack/static/docs/_modules/simstack/core/node.html +1392 -0
- simstack/static/docs/_modules/simstack/core/node_claim.html +347 -0
- simstack/static/docs/_modules/simstack/core/node_runner.html +711 -0
- simstack/static/docs/_modules/simstack/core/process_results.html +418 -0
- simstack/static/docs/_modules/simstack/core/recompute_artifacts.html +433 -0
- simstack/static/docs/_modules/simstack/core/reset_db.html +328 -0
- simstack/static/docs/_modules/simstack/core/resource_assignment.html +553 -0
- simstack/static/docs/_modules/simstack/core/resources.html +424 -0
- simstack/static/docs/_modules/simstack/core/route_table.html +349 -0
- simstack/static/docs/_modules/simstack/core/run_docker.html +425 -0
- simstack/static/docs/_modules/simstack/core/run_node.html +390 -0
- simstack/static/docs/_modules/simstack/core/runner.html +491 -0
- simstack/static/docs/_modules/simstack/core/services/base_service.html +522 -0
- simstack/static/docs/_modules/simstack/core/services/file_transfer_service.html +436 -0
- simstack/static/docs/_modules/simstack/core/services/git_restart_service.html +331 -0
- simstack/static/docs/_modules/simstack/core/services/git_uv_update_service.html +427 -0
- simstack/static/docs/_modules/simstack/core/services/node_execution_service.html +507 -0
- simstack/static/docs/_modules/simstack/core/services/resource_branch_monitor_service.html +390 -0
- simstack/static/docs/_modules/simstack/core/services/runner_cleanup_service.html +468 -0
- simstack/static/docs/_modules/simstack/core/services/runner_manager.html +485 -0
- simstack/static/docs/_modules/simstack/core/services/runner_status_service.html +329 -0
- simstack/static/docs/_modules/simstack/core/services/slurm_status_service.html +386 -0
- simstack/static/docs/_modules/simstack/core/services/stop_check_service.html +346 -0
- simstack/static/docs/_modules/simstack/core/services/timeout_restart_service.html +345 -0
- simstack/static/docs/_modules/simstack/core/simstack_result.html +355 -0
- simstack/static/docs/_modules/simstack/core/submit_node.html +536 -0
- simstack/static/docs/_modules/simstack/core/task_id.html +344 -0
- simstack/static/docs/_modules/simstack/methods/archive_files.html +598 -0
- simstack/static/docs/_modules/simstack/methods/fire_and_forget_runner.html +432 -0
- simstack/static/docs/_modules/simstack/methods/generate_test.html +443 -0
- simstack/static/docs/_modules/simstack/methods/get_file.html +342 -0
- simstack/static/docs/_modules/simstack/methods/mass_runner.html +476 -0
- simstack/static/docs/_modules/simstack/methods/multiple_executor.html +674 -0
- simstack/static/docs/_modules/simstack/methods/switch_git.html +332 -0
- simstack/static/docs/_modules/simstack/methods/upload_helpers.html +403 -0
- simstack/static/docs/_modules/simstack/models/array_list.html +337 -0
- simstack/static/docs/_modules/simstack/models/array_storage.html +417 -0
- simstack/static/docs/_modules/simstack/models/base_lists.html +374 -0
- simstack/static/docs/_modules/simstack/models/base_types.html +588 -0
- simstack/static/docs/_modules/simstack/models/charts_artifact.html +1035 -0
- simstack/static/docs/_modules/simstack/models/dataset.html +866 -0
- simstack/static/docs/_modules/simstack/models/dataset_metadata.html +711 -0
- simstack/static/docs/_modules/simstack/models/datasettuple.html +1005 -0
- simstack/static/docs/_modules/simstack/models/file_instance.html +472 -0
- simstack/static/docs/_modules/simstack/models/file_list.html +367 -0
- simstack/static/docs/_modules/simstack/models/files.html +773 -0
- simstack/static/docs/_modules/simstack/models/fire_and_forget_result.html +335 -0
- simstack/static/docs/_modules/simstack/models/images2d.html +447 -0
- simstack/static/docs/_modules/simstack/models/log_entry_model.html +356 -0
- simstack/static/docs/_modules/simstack/models/models.html +374 -0
- simstack/static/docs/_modules/simstack/models/named_data_reference.html +355 -0
- simstack/static/docs/_modules/simstack/models/node_registry.html +415 -0
- simstack/static/docs/_modules/simstack/models/pandas_model.html +570 -0
- simstack/static/docs/_modules/simstack/models/parameters.html +739 -0
- simstack/static/docs/_modules/simstack/models/pickle_models.html +631 -0
- simstack/static/docs/_modules/simstack/models/project.html +329 -0
- simstack/static/docs/_modules/simstack/models/resource_assignment.html +501 -0
- simstack/static/docs/_modules/simstack/models/resource_definition.html +477 -0
- simstack/static/docs/_modules/simstack/models/runner_model.html +361 -0
- simstack/static/docs/_modules/simstack/models/simple_table.html +413 -0
- simstack/static/docs/_modules/simstack/models/simstack_model.html +416 -0
- simstack/static/docs/_modules/simstack/models/slurm_info.html +333 -0
- simstack/static/docs/_modules/simstack/models/table_artifact.html +406 -0
- simstack/static/docs/_modules/simstack/models/tag.html +328 -0
- simstack/static/docs/_modules/simstack/tables/model_table.html +519 -0
- simstack/static/docs/_modules/simstack/tables/node_children.html +538 -0
- simstack/static/docs/_modules/simstack/tables/node_table.html +854 -0
- simstack/static/docs/_modules/simstack/tables/table_builder.html +642 -0
- simstack/static/docs/_modules/simstack/util/async_zip_utils.html +337 -0
- simstack/static/docs/_modules/simstack/util/b64mixin.html +339 -0
- simstack/static/docs/_modules/simstack/util/cleaned_json_schema.html +336 -0
- simstack/static/docs/_modules/simstack/util/config_reader.html +498 -0
- simstack/static/docs/_modules/simstack/util/custom_model_dump.html +391 -0
- simstack/static/docs/_modules/simstack/util/database_information.html +488 -0
- simstack/static/docs/_modules/simstack/util/db.html +1392 -0
- simstack/static/docs/_modules/simstack/util/db_logger.html +448 -0
- simstack/static/docs/_modules/simstack/util/default_from_dict.html +376 -0
- simstack/static/docs/_modules/simstack/util/directory_iterator.html +553 -0
- simstack/static/docs/_modules/simstack/util/docstring_parser.html +526 -0
- simstack/static/docs/_modules/simstack/util/file_hashing.html +394 -0
- simstack/static/docs/_modules/simstack/util/file_transfer_client.html +791 -0
- simstack/static/docs/_modules/simstack/util/files.html +733 -0
- simstack/static/docs/_modules/simstack/util/find_python_files.html +349 -0
- simstack/static/docs/_modules/simstack/util/generate_ui_schema.html +396 -0
- simstack/static/docs/_modules/simstack/util/generic_list_mixin.html +487 -0
- simstack/static/docs/_modules/simstack/util/get_module_path.html +336 -0
- simstack/static/docs/_modules/simstack/util/git_pull.html +381 -0
- simstack/static/docs/_modules/simstack/util/git_repository_status.html +411 -0
- simstack/static/docs/_modules/simstack/util/import_module.html +377 -0
- simstack/static/docs/_modules/simstack/util/importer.html +637 -0
- simstack/static/docs/_modules/simstack/util/init_data_source.html +357 -0
- simstack/static/docs/_modules/simstack/util/make_graph.html +423 -0
- simstack/static/docs/_modules/simstack/util/make_table.html +1171 -0
- simstack/static/docs/_modules/simstack/util/mappings.html +378 -0
- simstack/static/docs/_modules/simstack/util/minimal_route_finder.html +388 -0
- simstack/static/docs/_modules/simstack/util/mock_db.html +472 -0
- simstack/static/docs/_modules/simstack/util/module_path_checker.html +354 -0
- simstack/static/docs/_modules/simstack/util/object_list_mixin.html +649 -0
- simstack/static/docs/_modules/simstack/util/path_manager.html +566 -0
- simstack/static/docs/_modules/simstack/util/project_root_finder.html +357 -0
- simstack/static/docs/_modules/simstack/util/queue_watcher.html +593 -0
- simstack/static/docs/_modules/simstack/util/resource_config.html +532 -0
- simstack/static/docs/_modules/simstack/util/route_finder.html +390 -0
- simstack/static/docs/_modules/simstack/util/runner_util.html +487 -0
- simstack/static/docs/_modules/simstack/util/runner_utils.html +468 -0
- simstack/static/docs/_modules/simstack/util/safe_code_executor.html +510 -0
- simstack/static/docs/_modules/simstack/util/sample_config.html +414 -0
- simstack/static/docs/_modules/simstack/util/sensitive_content_filter.html +364 -0
- simstack/static/docs/_modules/simstack/util/setup_logging.html +365 -0
- simstack/static/docs/_modules/simstack/util/submit_to_watchdog.html +425 -0
- simstack/static/docs/_modules/simstack/util/toml_reader.html +482 -0
- simstack/static/docs/_modules/simstack/util/transform_file_name.html +357 -0
- simstack/static/docs/_modules/simstack/util/ui_tools.html +541 -0
- simstack/static/docs/_sources/architecture.rst.txt +25 -0
- simstack/static/docs/_sources/array_lists.rst.txt +60 -0
- simstack/static/docs/_sources/ci_pipeline.rst.txt +34 -0
- simstack/static/docs/_sources/data.rst.txt +175 -0
- simstack/static/docs/_sources/database_migrations.rst.txt +310 -0
- simstack/static/docs/_sources/datasets.rst.txt +93 -0
- simstack/static/docs/_sources/developer_guide.rst.txt +25 -0
- simstack/static/docs/_sources/docker_nodes.rst.txt +149 -0
- simstack/static/docs/_sources/files.rst.txt +159 -0
- simstack/static/docs/_sources/fire_and_forget_runner.rst.txt +67 -0
- simstack/static/docs/_sources/index.rst.txt +25 -0
- simstack/static/docs/_sources/installation.rst.txt +213 -0
- simstack/static/docs/_sources/lists.rst.txt +111 -0
- simstack/static/docs/_sources/mass_runner.rst.txt +91 -0
- simstack/static/docs/_sources/misc.rst.txt +106 -0
- simstack/static/docs/_sources/overview.rst.txt +91 -0
- simstack/static/docs/_sources/recovery.rst.txt +38 -0
- simstack/static/docs/_sources/resource_config.rst.txt +141 -0
- simstack/static/docs/_sources/simstack/modules/modules.rst.txt +7 -0
- simstack/static/docs/_sources/simstack/modules/simstack.core.rst.txt +205 -0
- simstack/static/docs/_sources/simstack/modules/simstack.core.services.rst.txt +109 -0
- simstack/static/docs/_sources/simstack/modules/simstack.methods.rst.txt +77 -0
- simstack/static/docs/_sources/simstack/modules/simstack.models.rst.txt +261 -0
- simstack/static/docs/_sources/simstack/modules/simstack.rst.txt +22 -0
- simstack/static/docs/_sources/simstack/modules/simstack.tables.rst.txt +45 -0
- simstack/static/docs/_sources/simstack/modules/simstack.util.rst.txt +381 -0
- simstack/static/docs/_sources/submit.rst.txt +141 -0
- simstack/static/docs/_sources/tables.rst.txt +50 -0
- simstack/static/docs/_sources/testing_complex_nodes.rst.txt +92 -0
- simstack/static/docs/_sources/ui_documentation.rst.txt +272 -0
- simstack/static/docs/_sources/workflows.rst.txt +446 -0
- simstack/static/docs/_static/base-stemmer.js +476 -0
- simstack/static/docs/_static/basic.css +906 -0
- simstack/static/docs/_static/cobalt2-theme.css +1 -0
- simstack/static/docs/_static/debug.css +69 -0
- simstack/static/docs/_static/docs-build-badge.css +51 -0
- simstack/static/docs/_static/docs-build-badge.js +51 -0
- simstack/static/docs/_static/doctools.js +150 -0
- simstack/static/docs/_static/documentation_options.js +13 -0
- simstack/static/docs/_static/english-stemmer.js +1066 -0
- simstack/static/docs/_static/file.png +0 -0
- simstack/static/docs/_static/language_data.js +13 -0
- simstack/static/docs/_static/minus.png +0 -0
- simstack/static/docs/_static/plus.png +0 -0
- simstack/static/docs/_static/pygments.css +250 -0
- simstack/static/docs/_static/scripts/furo-extensions.js +0 -0
- simstack/static/docs/_static/scripts/furo.js +3 -0
- simstack/static/docs/_static/scripts/furo.js.LICENSE.txt +7 -0
- simstack/static/docs/_static/scripts/furo.js.map +1 -0
- simstack/static/docs/_static/searchtools.js +693 -0
- simstack/static/docs/_static/skeleton.css +296 -0
- simstack/static/docs/_static/sphinx_highlight.js +159 -0
- simstack/static/docs/_static/styles/furo-extensions.css +2 -0
- simstack/static/docs/_static/styles/furo-extensions.css.map +1 -0
- simstack/static/docs/_static/styles/furo.css +2 -0
- simstack/static/docs/_static/styles/furo.css.map +1 -0
- simstack/static/docs/architecture.html +340 -0
- simstack/static/docs/array_lists.html +678 -0
- simstack/static/docs/ci_pipeline.html +385 -0
- simstack/static/docs/data.html +545 -0
- simstack/static/docs/database_migrations.html +652 -0
- simstack/static/docs/datasets.html +1268 -0
- simstack/static/docs/developer_guide.html +359 -0
- simstack/static/docs/docker_nodes.html +503 -0
- simstack/static/docs/files.html +718 -0
- simstack/static/docs/fire_and_forget_runner.html +641 -0
- simstack/static/docs/genindex.html +6390 -0
- simstack/static/docs/index.html +516 -0
- simstack/static/docs/installation.html +553 -0
- simstack/static/docs/lists.html +478 -0
- simstack/static/docs/mass_runner.html +481 -0
- simstack/static/docs/misc.html +454 -0
- simstack/static/docs/objects.inv +0 -0
- simstack/static/docs/overview.html +469 -0
- simstack/static/docs/py-modindex.html +1111 -0
- simstack/static/docs/recovery.html +371 -0
- simstack/static/docs/resource_config.html +590 -0
- simstack/static/docs/search.html +327 -0
- simstack/static/docs/searchindex.js +1 -0
- simstack/static/docs/simstack/modules/modules.html +489 -0
- simstack/static/docs/simstack/modules/simstack.core.html +1883 -0
- simstack/static/docs/simstack/modules/simstack.core.services.html +698 -0
- simstack/static/docs/simstack/modules/simstack.html +3060 -0
- simstack/static/docs/simstack/modules/simstack.methods.html +1150 -0
- simstack/static/docs/simstack/modules/simstack.models.html +13113 -0
- simstack/static/docs/simstack/modules/simstack.tables.html +635 -0
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- simstack/static/docs/submit.html +487 -0
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- simstack/static/docs/testing_complex_nodes.html +458 -0
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- simstack/static/docs/workflows.html +766 -0
- simstack/tables/__init__.py +0 -0
- simstack/tables/model_table.py +191 -0
- simstack/tables/node_children.py +219 -0
- simstack/tables/node_table.py +517 -0
- simstack/tables/table_builder.py +314 -0
- simstack/util/__init__.py +0 -0
- simstack/util/async_zip_utils.py +18 -0
- simstack/util/b64mixin.py +23 -0
- simstack/util/cleaned_json_schema.py +20 -0
- simstack/util/config_reader.py +179 -0
- simstack/util/custom_model_dump.py +75 -0
- simstack/util/database_information.py +160 -0
- simstack/util/db.py +1013 -0
- simstack/util/db_logger.py +117 -0
- simstack/util/default_from_dict.py +57 -0
- simstack/util/directory_iterator.py +216 -0
- simstack/util/docstring_parser.py +186 -0
- simstack/util/file_hashing.py +72 -0
- simstack/util/file_transfer_client.py +427 -0
- simstack/util/files.py +396 -0
- simstack/util/find_python_files.py +33 -0
- simstack/util/generate_ui_schema.py +80 -0
- simstack/util/generic_list_mixin.py +120 -0
- simstack/util/geometry_utils.py +118 -0
- simstack/util/get_module_path.py +20 -0
- simstack/util/git_pull.py +65 -0
- simstack/util/git_repository_status.py +95 -0
- simstack/util/import_module.py +63 -0
- simstack/util/importer.py +312 -0
- simstack/util/init_data_source.py +41 -0
- simstack/util/make_graph.py +107 -0
- simstack/util/make_table.py +837 -0
- simstack/util/mappings.py +41 -0
- simstack/util/minimal_route_finder.py +72 -0
- simstack/util/mock_db.py +144 -0
- simstack/util/module_path_checker.py +38 -0
- simstack/util/object_list_mixin.py +282 -0
- simstack/util/path_manager.py +223 -0
- simstack/util/project_root_finder.py +41 -0
- simstack/util/queue_watcher.py +262 -0
- simstack/util/resource_config.py +198 -0
- simstack/util/route_finder.py +74 -0
- simstack/util/runner_util.py +166 -0
- simstack/util/runner_utils.py +143 -0
- simstack/util/safe_code_executor.py +194 -0
- simstack/util/sample_config.py +98 -0
- simstack/util/sensitive_content_filter.py +48 -0
- simstack/util/setup_logging.py +49 -0
- simstack/util/submit_to_watchdog.py +106 -0
- simstack/util/toml_reader.py +142 -0
- simstack/util/transform_file_name.py +41 -0
- simstack/util/ui_tools.py +213 -0
- simstack-2.0.1.dist-info/METADATA +454 -0
- simstack-2.0.1.dist-info/RECORD +354 -0
- simstack-2.0.1.dist-info/WHEEL +5 -0
- simstack-2.0.1.dist-info/entry_points.txt +12 -0
- simstack-2.0.1.dist-info/licenses/LICENSE +21 -0
- simstack-2.0.1.dist-info/top_level.txt +1 -0
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<li class="toctree-l1"><a class="reference internal" href="../../../overview.html">Overview</a></li>
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<li class="toctree-l2"><a class="reference internal" href="../../../data.html">Persisting and Visualizing Data</a></li>
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<article role="main" id="furo-main-content">
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<h1>Source code for simstack.util.queue_watcher</h1><div class="highlight"><pre>
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<span></span><span class="ch">#!/usr/bin/env python3</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">argparse</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">os</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">signal</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">subprocess</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">sys</span>
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<span class="kn">import</span><span class="w"> </span><span class="nn">time</span>
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<span class="kn">from</span><span class="w"> </span><span class="nn">concurrent.futures</span><span class="w"> </span><span class="kn">import</span> <span class="n">ThreadPoolExecutor</span><span class="p">,</span> <span class="n">as_completed</span>
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<span class="kn">from</span><span class="w"> </span><span class="nn">pathlib</span><span class="w"> </span><span class="kn">import</span> <span class="n">Path</span>
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<span class="kn">from</span><span class="w"> </span><span class="nn">typing</span><span class="w"> </span><span class="kn">import</span> <span class="n">Dict</span><span class="p">,</span> <span class="n">Optional</span><span class="p">,</span> <span class="n">Tuple</span>
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<div class="viewcode-block" id="parse_spec">
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<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.parse_spec">[docs]</a>
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<span class="k">def</span><span class="w"> </span><span class="nf">parse_spec</span><span class="p">(</span>
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<span class="n">cmd_file</span><span class="p">:</span> <span class="n">Path</span>
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<span class="p">)</span> <span class="o">-></span> <span class="n">Tuple</span><span class="p">[</span><span class="n">Optional</span><span class="p">[</span><span class="nb">str</span><span class="p">],</span> <span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">str</span><span class="p">],</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">str</span><span class="p">],</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">int</span><span class="p">]]:</span>
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<span class="n">cwd</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">str</span><span class="p">]</span> <span class="o">=</span> <span class="kc">None</span>
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<span class="n">env</span><span class="p">:</span> <span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">str</span><span class="p">]</span> <span class="o">=</span> <span class="p">{}</span>
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<span class="n">command</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">str</span><span class="p">]</span> <span class="o">=</span> <span class="kc">None</span>
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<span class="n">timeout</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">int</span><span class="p">]</span> <span class="o">=</span> <span class="kc">None</span>
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<span class="k">with</span> <span class="n">cmd_file</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="s2">"r"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span><span class="p">)</span> <span class="k">as</span> <span class="n">f</span><span class="p">:</span>
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<span class="k">for</span> <span class="n">raw</span> <span class="ow">in</span> <span class="n">f</span><span class="p">:</span>
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<span class="n">line</span> <span class="o">=</span> <span class="n">raw</span><span class="o">.</span><span class="n">strip</span><span class="p">()</span>
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300
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<span class="k">if</span> <span class="ow">not</span> <span class="n">line</span><span class="p">:</span>
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<span class="k">continue</span>
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<span class="k">if</span> <span class="n">line</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="s2">"CWD="</span><span class="p">):</span>
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<span class="n">cwd</span> <span class="o">=</span> <span class="n">line</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="s2">"CWD="</span><span class="p">)</span> <span class="p">:]</span>
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<span class="k">elif</span> <span class="n">line</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="s2">"ENV["</span><span class="p">)</span> <span class="ow">and</span> <span class="s2">"]="</span> <span class="ow">in</span> <span class="n">line</span><span class="p">:</span>
|
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<span class="n">key</span> <span class="o">=</span> <span class="n">line</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="s2">"ENV["</span><span class="p">)</span> <span class="p">:</span> <span class="n">line</span><span class="o">.</span><span class="n">index</span><span class="p">(</span><span class="s2">"]="</span><span class="p">,</span> <span class="nb">len</span><span class="p">(</span><span class="s2">"ENV["</span><span class="p">))]</span>
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<span class="n">val</span> <span class="o">=</span> <span class="n">line</span><span class="o">.</span><span class="n">split</span><span class="p">(</span><span class="s2">"]="</span><span class="p">,</span> <span class="mi">1</span><span class="p">)[</span><span class="mi">1</span><span class="p">]</span>
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<span class="n">env</span><span class="p">[</span><span class="n">key</span><span class="p">]</span> <span class="o">=</span> <span class="n">val</span>
|
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<span class="k">elif</span> <span class="n">line</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="s2">"CMD="</span><span class="p">):</span>
|
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<span class="n">command</span> <span class="o">=</span> <span class="n">line</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="s2">"CMD="</span><span class="p">)</span> <span class="p">:]</span>
|
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<span class="k">elif</span> <span class="n">line</span><span class="o">.</span><span class="n">startswith</span><span class="p">(</span><span class="s2">"TIMEOUT="</span><span class="p">):</span>
|
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<span class="k">try</span><span class="p">:</span>
|
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<span class="n">timeout</span> <span class="o">=</span> <span class="nb">int</span><span class="p">(</span><span class="n">line</span><span class="p">[</span><span class="nb">len</span><span class="p">(</span><span class="s2">"TIMEOUT="</span><span class="p">)</span> <span class="p">:])</span>
|
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<span class="k">except</span> <span class="ne">ValueError</span><span class="p">:</span>
|
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+
<span class="n">timeout</span> <span class="o">=</span> <span class="kc">None</span>
|
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<span class="k">return</span> <span class="n">cwd</span><span class="p">,</span> <span class="n">env</span><span class="p">,</span> <span class="n">command</span><span class="p">,</span> <span class="n">timeout</span></div>
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317
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<div class="viewcode-block" id="run_command">
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<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.run_command">[docs]</a>
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<span class="k">def</span><span class="w"> </span><span class="nf">run_command</span><span class="p">(</span>
|
|
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+
<span class="n">command</span><span class="p">:</span> <span class="nb">str</span><span class="p">,</span>
|
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+
<span class="n">cwd</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">str</span><span class="p">],</span>
|
|
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<span class="n">env</span><span class="p">:</span> <span class="n">Dict</span><span class="p">[</span><span class="nb">str</span><span class="p">,</span> <span class="nb">str</span><span class="p">],</span>
|
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<span class="n">timeout</span><span class="p">:</span> <span class="n">Optional</span><span class="p">[</span><span class="nb">int</span><span class="p">],</span>
|
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<span class="n">out_file</span><span class="p">:</span> <span class="n">Path</span><span class="p">,</span>
|
|
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+
<span class="n">err_file</span><span class="p">:</span> <span class="n">Path</span><span class="p">,</span>
|
|
328
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+
<span class="p">)</span> <span class="o">-></span> <span class="nb">int</span><span class="p">:</span>
|
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329
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+
<span class="n">proc_env</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">environ</span><span class="o">.</span><span class="n">copy</span><span class="p">()</span>
|
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330
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+
<span class="n">proc_env</span><span class="o">.</span><span class="n">update</span><span class="p">(</span><span class="n">env</span><span class="p">)</span>
|
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331
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+
<span class="k">with</span> <span class="n">out_file</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="s2">"w"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span><span class="p">)</span> <span class="k">as</span> <span class="n">out</span><span class="p">,</span> <span class="n">err_file</span><span class="o">.</span><span class="n">open</span><span class="p">(</span>
|
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332
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+
<span class="s2">"w"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span>
|
|
333
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+
<span class="p">)</span> <span class="k">as</span> <span class="n">err</span><span class="p">:</span>
|
|
334
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+
<span class="k">try</span><span class="p">:</span>
|
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335
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+
<span class="n">proc</span> <span class="o">=</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">run</span><span class="p">(</span>
|
|
336
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+
<span class="n">command</span><span class="p">,</span>
|
|
337
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+
<span class="n">shell</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
|
|
338
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+
<span class="n">cwd</span><span class="o">=</span><span class="n">cwd</span> <span class="k">if</span> <span class="n">cwd</span> <span class="k">else</span> <span class="kc">None</span><span class="p">,</span>
|
|
339
|
+
<span class="n">env</span><span class="o">=</span><span class="n">proc_env</span><span class="p">,</span>
|
|
340
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+
<span class="n">stdout</span><span class="o">=</span><span class="n">out</span><span class="p">,</span>
|
|
341
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+
<span class="n">stderr</span><span class="o">=</span><span class="n">err</span><span class="p">,</span>
|
|
342
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+
<span class="n">text</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span>
|
|
343
|
+
<span class="n">timeout</span><span class="o">=</span><span class="n">timeout</span> <span class="k">if</span> <span class="p">(</span><span class="n">timeout</span> <span class="ow">and</span> <span class="n">timeout</span> <span class="o">></span> <span class="mi">0</span><span class="p">)</span> <span class="k">else</span> <span class="kc">None</span><span class="p">,</span>
|
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344
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+
<span class="n">check</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span>
|
|
345
|
+
<span class="p">)</span>
|
|
346
|
+
<span class="k">return</span> <span class="n">proc</span><span class="o">.</span><span class="n">returncode</span>
|
|
347
|
+
<span class="k">except</span> <span class="n">subprocess</span><span class="o">.</span><span class="n">TimeoutExpired</span><span class="p">:</span>
|
|
348
|
+
<span class="n">err</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="s2">"</span><span class="se">\n</span><span class="s2">[watcher] Command timed out</span><span class="se">\n</span><span class="s2">"</span><span class="p">)</span>
|
|
349
|
+
<span class="k">return</span> <span class="mi">124</span>
|
|
350
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
351
|
+
<span class="n">err</span><span class="o">.</span><span class="n">write</span><span class="p">(</span><span class="sa">f</span><span class="s2">"</span><span class="se">\n</span><span class="s2">[watcher] Execution error: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="se">\n</span><span class="s2">"</span><span class="p">)</span>
|
|
352
|
+
<span class="k">return</span> <span class="mi">1</span></div>
|
|
353
|
+
|
|
354
|
+
|
|
355
|
+
|
|
356
|
+
<div class="viewcode-block" id="process_job_from_claim">
|
|
357
|
+
<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.process_job_from_claim">[docs]</a>
|
|
358
|
+
<span class="k">def</span><span class="w"> </span><span class="nf">process_job_from_claim</span><span class="p">(</span><span class="n">base_stem</span><span class="p">:</span> <span class="n">Path</span><span class="p">,</span> <span class="n">claimed_by_lock</span><span class="p">:</span> <span class="nb">bool</span><span class="p">)</span> <span class="o">-></span> <span class="kc">None</span><span class="p">:</span>
|
|
359
|
+
<span class="w"> </span><span class="sd">"""</span>
|
|
360
|
+
<span class="sd"> Process a job using base path (without suffix). If claimed_by_lock is True, we did not</span>
|
|
361
|
+
<span class="sd"> rename .ready; we will remove it at the end. Otherwise, we operate on .claim and remove it.</span>
|
|
362
|
+
<span class="sd"> """</span>
|
|
363
|
+
<span class="n">cmd_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".cmd"</span><span class="p">)</span>
|
|
364
|
+
<span class="n">ready_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".ready"</span><span class="p">)</span>
|
|
365
|
+
<span class="n">claim_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".claim"</span><span class="p">)</span>
|
|
366
|
+
<span class="n">lock_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".lock"</span><span class="p">)</span>
|
|
367
|
+
<span class="n">out_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".stdout"</span><span class="p">)</span>
|
|
368
|
+
<span class="n">err_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".stderr"</span><span class="p">)</span>
|
|
369
|
+
<span class="n">exit_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".exit"</span><span class="p">)</span>
|
|
370
|
+
<span class="n">done_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".done"</span><span class="p">)</span>
|
|
371
|
+
<span class="n">fail_file</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".fail"</span><span class="p">)</span>
|
|
372
|
+
|
|
373
|
+
<span class="k">try</span><span class="p">:</span>
|
|
374
|
+
<span class="k">if</span> <span class="ow">not</span> <span class="n">cmd_file</span><span class="o">.</span><span class="n">exists</span><span class="p">():</span>
|
|
375
|
+
<span class="n">fail_file</span><span class="o">.</span><span class="n">touch</span><span class="p">()</span>
|
|
376
|
+
<span class="k">return</span>
|
|
377
|
+
|
|
378
|
+
<span class="n">cwd</span><span class="p">,</span> <span class="n">env</span><span class="p">,</span> <span class="n">command</span><span class="p">,</span> <span class="n">timeout</span> <span class="o">=</span> <span class="n">parse_spec</span><span class="p">(</span><span class="n">cmd_file</span><span class="p">)</span>
|
|
379
|
+
<span class="k">if</span> <span class="ow">not</span> <span class="n">command</span><span class="p">:</span>
|
|
380
|
+
<span class="n">err_file</span><span class="o">.</span><span class="n">write_text</span><span class="p">(</span><span class="s2">"[watcher] CMD missing in spec</span><span class="se">\n</span><span class="s2">"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span><span class="p">)</span>
|
|
381
|
+
<span class="n">exit_file</span><span class="o">.</span><span class="n">write_text</span><span class="p">(</span><span class="s2">"2</span><span class="se">\n</span><span class="s2">"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span><span class="p">)</span>
|
|
382
|
+
<span class="n">fail_file</span><span class="o">.</span><span class="n">touch</span><span class="p">()</span>
|
|
383
|
+
<span class="k">return</span>
|
|
384
|
+
|
|
385
|
+
<span class="n">rc</span> <span class="o">=</span> <span class="n">run_command</span><span class="p">(</span><span class="n">command</span><span class="p">,</span> <span class="n">cwd</span><span class="p">,</span> <span class="n">env</span><span class="p">,</span> <span class="n">timeout</span><span class="p">,</span> <span class="n">out_file</span><span class="p">,</span> <span class="n">err_file</span><span class="p">)</span>
|
|
386
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Job </span><span class="si">{</span><span class="n">base_stem</span><span class="o">.</span><span class="n">name</span><span class="si">}</span><span class="s2"> finished with rc=</span><span class="si">{</span><span class="n">rc</span><span class="si">}</span><span class="s2">"</span><span class="p">)</span>
|
|
387
|
+
<span class="n">exit_file</span><span class="o">.</span><span class="n">write_text</span><span class="p">(</span><span class="sa">f</span><span class="s2">"</span><span class="si">{</span><span class="n">rc</span><span class="si">}</span><span class="se">\n</span><span class="s2">"</span><span class="p">,</span> <span class="n">encoding</span><span class="o">=</span><span class="s2">"utf-8"</span><span class="p">)</span>
|
|
388
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Job </span><span class="si">{</span><span class="n">base_stem</span><span class="o">.</span><span class="n">name</span><span class="si">}</span><span class="s2"> finished"</span><span class="p">)</span>
|
|
389
|
+
<span class="p">(</span><span class="n">done_file</span> <span class="k">if</span> <span class="n">rc</span> <span class="o">==</span> <span class="mi">0</span> <span class="k">else</span> <span class="n">fail_file</span><span class="p">)</span><span class="o">.</span><span class="n">touch</span><span class="p">()</span>
|
|
390
|
+
<span class="k">finally</span><span class="p">:</span>
|
|
391
|
+
<span class="c1"># Cleanup markers depending on the claim type</span>
|
|
392
|
+
<span class="k">if</span> <span class="n">claimed_by_lock</span><span class="p">:</span>
|
|
393
|
+
<span class="k">try</span><span class="p">:</span>
|
|
394
|
+
<span class="k">if</span> <span class="n">ready_file</span><span class="o">.</span><span class="n">exists</span><span class="p">():</span>
|
|
395
|
+
<span class="n">ready_file</span><span class="o">.</span><span class="n">unlink</span><span class="p">()</span>
|
|
396
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
397
|
+
<span class="nb">print</span><span class="p">(</span>
|
|
398
|
+
<span class="sa">f</span><span class="s2">"[watcher] Warning: failed to remove ready </span><span class="si">{</span><span class="n">ready_file</span><span class="si">}</span><span class="s2">: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span>
|
|
399
|
+
<span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">,</span>
|
|
400
|
+
<span class="p">)</span>
|
|
401
|
+
<span class="k">try</span><span class="p">:</span>
|
|
402
|
+
<span class="k">if</span> <span class="n">lock_file</span><span class="o">.</span><span class="n">exists</span><span class="p">():</span>
|
|
403
|
+
<span class="n">lock_file</span><span class="o">.</span><span class="n">unlink</span><span class="p">()</span>
|
|
404
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
405
|
+
<span class="nb">print</span><span class="p">(</span>
|
|
406
|
+
<span class="sa">f</span><span class="s2">"[watcher] Warning: failed to remove lock </span><span class="si">{</span><span class="n">lock_file</span><span class="si">}</span><span class="s2">: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span>
|
|
407
|
+
<span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">,</span>
|
|
408
|
+
<span class="p">)</span>
|
|
409
|
+
<span class="k">else</span><span class="p">:</span>
|
|
410
|
+
<span class="k">try</span><span class="p">:</span>
|
|
411
|
+
<span class="k">if</span> <span class="n">claim_file</span><span class="o">.</span><span class="n">exists</span><span class="p">():</span>
|
|
412
|
+
<span class="n">claim_file</span><span class="o">.</span><span class="n">unlink</span><span class="p">()</span>
|
|
413
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
414
|
+
<span class="nb">print</span><span class="p">(</span>
|
|
415
|
+
<span class="sa">f</span><span class="s2">"[watcher] Warning: failed to remove claim </span><span class="si">{</span><span class="n">claim_file</span><span class="si">}</span><span class="s2">: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span>
|
|
416
|
+
<span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">,</span>
|
|
417
|
+
<span class="p">)</span></div>
|
|
418
|
+
|
|
419
|
+
|
|
420
|
+
|
|
421
|
+
<div class="viewcode-block" id="try_claim">
|
|
422
|
+
<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.try_claim">[docs]</a>
|
|
423
|
+
<span class="k">def</span><span class="w"> </span><span class="nf">try_claim</span><span class="p">(</span>
|
|
424
|
+
<span class="n">ready_file</span><span class="p">:</span> <span class="n">Path</span><span class="p">,</span> <span class="n">retries</span><span class="p">:</span> <span class="nb">int</span> <span class="o">=</span> <span class="mi">5</span><span class="p">,</span> <span class="n">backoff</span><span class="p">:</span> <span class="nb">float</span> <span class="o">=</span> <span class="mf">0.05</span>
|
|
425
|
+
<span class="p">)</span> <span class="o">-></span> <span class="n">Optional</span><span class="p">[</span><span class="n">Path</span><span class="p">]:</span>
|
|
426
|
+
<span class="w"> </span><span class="sd">"""</span>
|
|
427
|
+
<span class="sd"> Atomically rename *.ready -> *.claim. Retries on transient failures.</span>
|
|
428
|
+
<span class="sd"> Returns claim path if successful, else None.</span>
|
|
429
|
+
<span class="sd"> """</span>
|
|
430
|
+
<span class="n">claim</span> <span class="o">=</span> <span class="n">ready_file</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".claim"</span><span class="p">)</span>
|
|
431
|
+
<span class="k">for</span> <span class="n">i</span> <span class="ow">in</span> <span class="nb">range</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">retries</span><span class="p">)):</span>
|
|
432
|
+
<span class="k">try</span><span class="p">:</span>
|
|
433
|
+
<span class="n">os</span><span class="o">.</span><span class="n">replace</span><span class="p">(</span><span class="n">ready_file</span><span class="p">,</span> <span class="n">claim</span><span class="p">)</span>
|
|
434
|
+
<span class="k">return</span> <span class="n">claim</span>
|
|
435
|
+
<span class="k">except</span> <span class="ne">FileNotFoundError</span><span class="p">:</span>
|
|
436
|
+
<span class="k">return</span> <span class="kc">None</span>
|
|
437
|
+
<span class="k">except</span> <span class="ne">PermissionError</span><span class="p">:</span>
|
|
438
|
+
<span class="c1"># Windows/NFS transient locks: backoff and retry</span>
|
|
439
|
+
<span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="n">backoff</span> <span class="o">*</span> <span class="p">(</span><span class="n">i</span> <span class="o">+</span> <span class="mi">1</span><span class="p">))</span>
|
|
440
|
+
<span class="k">except</span> <span class="ne">OSError</span><span class="p">:</span>
|
|
441
|
+
<span class="c1"># Other transient FS issues: backoff and retry</span>
|
|
442
|
+
<span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="n">backoff</span> <span class="o">*</span> <span class="p">(</span><span class="n">i</span> <span class="o">+</span> <span class="mi">1</span><span class="p">))</span>
|
|
443
|
+
<span class="k">return</span> <span class="kc">None</span></div>
|
|
444
|
+
|
|
445
|
+
|
|
446
|
+
|
|
447
|
+
<div class="viewcode-block" id="try_lock">
|
|
448
|
+
<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.try_lock">[docs]</a>
|
|
449
|
+
<span class="k">def</span><span class="w"> </span><span class="nf">try_lock</span><span class="p">(</span><span class="n">base_stem</span><span class="p">:</span> <span class="n">Path</span><span class="p">)</span> <span class="o">-></span> <span class="nb">bool</span><span class="p">:</span>
|
|
450
|
+
<span class="w"> </span><span class="sd">"""</span>
|
|
451
|
+
<span class="sd"> Create an exclusive lock file <id>.lock using O_CREAT|O_EXCL.</span>
|
|
452
|
+
<span class="sd"> Returns True if lock acquired, False otherwise.</span>
|
|
453
|
+
<span class="sd"> """</span>
|
|
454
|
+
<span class="n">lock_path</span> <span class="o">=</span> <span class="n">base_stem</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">".lock"</span><span class="p">)</span>
|
|
455
|
+
<span class="n">flags</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">O_CREAT</span> <span class="o">|</span> <span class="n">os</span><span class="o">.</span><span class="n">O_EXCL</span> <span class="o">|</span> <span class="n">os</span><span class="o">.</span><span class="n">O_WRONLY</span>
|
|
456
|
+
<span class="k">try</span><span class="p">:</span>
|
|
457
|
+
<span class="n">fd</span> <span class="o">=</span> <span class="n">os</span><span class="o">.</span><span class="n">open</span><span class="p">(</span><span class="n">lock_path</span><span class="p">,</span> <span class="n">flags</span><span class="p">,</span> <span class="mo">0o644</span><span class="p">)</span>
|
|
458
|
+
<span class="n">os</span><span class="o">.</span><span class="n">close</span><span class="p">(</span><span class="n">fd</span><span class="p">)</span>
|
|
459
|
+
<span class="k">return</span> <span class="kc">True</span>
|
|
460
|
+
<span class="k">except</span> <span class="ne">FileExistsError</span><span class="p">:</span>
|
|
461
|
+
<span class="k">return</span> <span class="kc">False</span>
|
|
462
|
+
<span class="k">except</span> <span class="ne">OSError</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
463
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Lock create failed for </span><span class="si">{</span><span class="n">lock_path</span><span class="si">}</span><span class="s2">: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">)</span>
|
|
464
|
+
<span class="k">return</span> <span class="kc">False</span></div>
|
|
465
|
+
|
|
466
|
+
|
|
467
|
+
|
|
468
|
+
<div class="viewcode-block" id="main">
|
|
469
|
+
<a class="viewcode-back" href="../../../simstack/modules/simstack.util.html#simstack.util.queue_watcher.main">[docs]</a>
|
|
470
|
+
<span class="k">def</span><span class="w"> </span><span class="nf">main</span><span class="p">()</span> <span class="o">-></span> <span class="nb">int</span><span class="p">:</span>
|
|
471
|
+
<span class="n">parser</span> <span class="o">=</span> <span class="n">argparse</span><span class="o">.</span><span class="n">ArgumentParser</span><span class="p">(</span>
|
|
472
|
+
<span class="n">description</span><span class="o">=</span><span class="s2">"Concurrent file-queue watcher with robust claiming"</span>
|
|
473
|
+
<span class="p">)</span>
|
|
474
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span>
|
|
475
|
+
<span class="s2">"--queue-dir"</span><span class="p">,</span> <span class="nb">type</span><span class="o">=</span><span class="n">Path</span><span class="p">,</span> <span class="n">required</span><span class="o">=</span><span class="kc">False</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="n">Path</span><span class="o">.</span><span class="n">cwd</span><span class="p">()</span> <span class="o">/</span> <span class="s2">"queue"</span>
|
|
476
|
+
<span class="p">)</span>
|
|
477
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--poll-interval"</span><span class="p">,</span> <span class="nb">type</span><span class="o">=</span><span class="nb">float</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="mf">1.0</span><span class="p">)</span>
|
|
478
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--workers"</span><span class="p">,</span> <span class="nb">type</span><span class="o">=</span><span class="nb">int</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="nb">min</span><span class="p">(</span><span class="mi">4</span><span class="p">,</span> <span class="p">(</span><span class="n">os</span><span class="o">.</span><span class="n">cpu_count</span><span class="p">()</span> <span class="ow">or</span> <span class="mi">2</span><span class="p">)))</span>
|
|
479
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span>
|
|
480
|
+
<span class="s2">"--use-srun"</span><span class="p">,</span>
|
|
481
|
+
<span class="n">action</span><span class="o">=</span><span class="s2">"store_true"</span><span class="p">,</span>
|
|
482
|
+
<span class="n">help</span><span class="o">=</span><span class="s2">"(deprecated; wrapper removed for simplicity)"</span><span class="p">,</span>
|
|
483
|
+
<span class="p">)</span>
|
|
484
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span><span class="s2">"--srun-args"</span><span class="p">,</span> <span class="nb">type</span><span class="o">=</span><span class="nb">str</span><span class="p">,</span> <span class="n">default</span><span class="o">=</span><span class="s2">""</span><span class="p">)</span>
|
|
485
|
+
<span class="n">parser</span><span class="o">.</span><span class="n">add_argument</span><span class="p">(</span>
|
|
486
|
+
<span class="s2">"--once"</span><span class="p">,</span> <span class="n">action</span><span class="o">=</span><span class="s2">"store_true"</span><span class="p">,</span> <span class="n">help</span><span class="o">=</span><span class="s2">"Process current claims and exit"</span>
|
|
487
|
+
<span class="p">)</span>
|
|
488
|
+
<span class="n">args</span> <span class="o">=</span> <span class="n">parser</span><span class="o">.</span><span class="n">parse_args</span><span class="p">()</span>
|
|
489
|
+
|
|
490
|
+
<span class="n">qd</span> <span class="o">=</span> <span class="n">args</span><span class="o">.</span><span class="n">queue_dir</span>
|
|
491
|
+
<span class="n">qd</span><span class="o">.</span><span class="n">mkdir</span><span class="p">(</span><span class="n">parents</span><span class="o">=</span><span class="kc">True</span><span class="p">,</span> <span class="n">exist_ok</span><span class="o">=</span><span class="kc">True</span><span class="p">)</span>
|
|
492
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Watching </span><span class="si">{</span><span class="n">qd</span><span class="si">}</span><span class="s2">, workers=</span><span class="si">{</span><span class="n">args</span><span class="o">.</span><span class="n">workers</span><span class="si">}</span><span class="s2">"</span><span class="p">)</span>
|
|
493
|
+
|
|
494
|
+
<span class="n">stop</span> <span class="o">=</span> <span class="p">{</span><span class="s2">"flag"</span><span class="p">:</span> <span class="kc">False</span><span class="p">}</span>
|
|
495
|
+
|
|
496
|
+
<span class="k">def</span><span class="w"> </span><span class="nf">handle_sig</span><span class="p">(</span><span class="n">_s</span><span class="p">,</span> <span class="n">_f</span><span class="p">):</span>
|
|
497
|
+
<span class="n">stop</span><span class="p">[</span><span class="s2">"flag"</span><span class="p">]</span> <span class="o">=</span> <span class="kc">True</span>
|
|
498
|
+
|
|
499
|
+
<span class="n">signal</span><span class="o">.</span><span class="n">signal</span><span class="p">(</span><span class="n">signal</span><span class="o">.</span><span class="n">SIGINT</span><span class="p">,</span> <span class="n">handle_sig</span><span class="p">)</span>
|
|
500
|
+
<span class="n">signal</span><span class="o">.</span><span class="n">signal</span><span class="p">(</span><span class="n">signal</span><span class="o">.</span><span class="n">SIGTERM</span><span class="p">,</span> <span class="n">handle_sig</span><span class="p">)</span>
|
|
501
|
+
|
|
502
|
+
<span class="k">with</span> <span class="n">ThreadPoolExecutor</span><span class="p">(</span><span class="n">max_workers</span><span class="o">=</span><span class="nb">max</span><span class="p">(</span><span class="mi">1</span><span class="p">,</span> <span class="n">args</span><span class="o">.</span><span class="n">workers</span><span class="p">))</span> <span class="k">as</span> <span class="n">pool</span><span class="p">:</span>
|
|
503
|
+
<span class="n">futures</span> <span class="o">=</span> <span class="nb">set</span><span class="p">()</span>
|
|
504
|
+
|
|
505
|
+
<span class="k">while</span> <span class="ow">not</span> <span class="n">stop</span><span class="p">[</span><span class="s2">"flag"</span><span class="p">]:</span>
|
|
506
|
+
<span class="n">claimed_any</span> <span class="o">=</span> <span class="kc">False</span>
|
|
507
|
+
|
|
508
|
+
<span class="c1"># Scan for all .ready files</span>
|
|
509
|
+
<span class="n">ready_list</span> <span class="o">=</span> <span class="nb">list</span><span class="p">(</span><span class="n">qd</span><span class="o">.</span><span class="n">glob</span><span class="p">(</span><span class="s2">"*.ready"</span><span class="p">))</span>
|
|
510
|
+
<span class="k">if</span> <span class="n">ready_list</span><span class="p">:</span>
|
|
511
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Found </span><span class="si">{</span><span class="nb">len</span><span class="p">(</span><span class="n">ready_list</span><span class="p">)</span><span class="si">}</span><span class="s2"> ready file(s)"</span><span class="p">)</span>
|
|
512
|
+
<span class="k">for</span> <span class="n">ready</span> <span class="ow">in</span> <span class="n">ready_list</span><span class="p">:</span>
|
|
513
|
+
<span class="n">base_stem</span> <span class="o">=</span> <span class="n">ready</span><span class="o">.</span><span class="n">with_suffix</span><span class="p">(</span><span class="s2">""</span><span class="p">)</span> <span class="c1"># drop .ready</span>
|
|
514
|
+
<span class="c1"># 1) Preferred: atomic rename to .claim (with retries)</span>
|
|
515
|
+
<span class="n">claim</span> <span class="o">=</span> <span class="n">try_claim</span><span class="p">(</span><span class="n">ready</span><span class="p">)</span>
|
|
516
|
+
<span class="k">if</span> <span class="n">claim</span> <span class="ow">is</span> <span class="ow">not</span> <span class="kc">None</span><span class="p">:</span>
|
|
517
|
+
<span class="n">claimed_any</span> <span class="o">=</span> <span class="kc">True</span>
|
|
518
|
+
<span class="n">futures</span><span class="o">.</span><span class="n">add</span><span class="p">(</span><span class="n">pool</span><span class="o">.</span><span class="n">submit</span><span class="p">(</span><span class="n">process_job_from_claim</span><span class="p">,</span> <span class="n">base_stem</span><span class="p">,</span> <span class="kc">False</span><span class="p">))</span>
|
|
519
|
+
<span class="k">continue</span>
|
|
520
|
+
|
|
521
|
+
<span class="c1"># 2) Fallback: exclusive lock file if rename failed</span>
|
|
522
|
+
<span class="k">if</span> <span class="n">try_lock</span><span class="p">(</span><span class="n">base_stem</span><span class="p">):</span>
|
|
523
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Claimed by lock: </span><span class="si">{</span><span class="n">base_stem</span><span class="o">.</span><span class="n">name</span><span class="si">}</span><span class="s2">"</span><span class="p">)</span>
|
|
524
|
+
<span class="n">claimed_any</span> <span class="o">=</span> <span class="kc">True</span>
|
|
525
|
+
<span class="n">futures</span><span class="o">.</span><span class="n">add</span><span class="p">(</span><span class="n">pool</span><span class="o">.</span><span class="n">submit</span><span class="p">(</span><span class="n">process_job_from_claim</span><span class="p">,</span> <span class="n">base_stem</span><span class="p">,</span> <span class="kc">True</span><span class="p">))</span>
|
|
526
|
+
|
|
527
|
+
<span class="c1"># Reap done tasks</span>
|
|
528
|
+
<span class="n">done_now</span> <span class="o">=</span> <span class="p">{</span><span class="n">f</span> <span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">futures</span> <span class="k">if</span> <span class="n">f</span><span class="o">.</span><span class="n">done</span><span class="p">()}</span>
|
|
529
|
+
<span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">done_now</span><span class="p">:</span>
|
|
530
|
+
<span class="k">try</span><span class="p">:</span>
|
|
531
|
+
<span class="n">f</span><span class="o">.</span><span class="n">result</span><span class="p">()</span>
|
|
532
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
533
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Job raised: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">)</span>
|
|
534
|
+
<span class="n">futures</span><span class="o">.</span><span class="n">discard</span><span class="p">(</span><span class="n">f</span><span class="p">)</span>
|
|
535
|
+
|
|
536
|
+
<span class="k">if</span> <span class="n">args</span><span class="o">.</span><span class="n">once</span><span class="p">:</span>
|
|
537
|
+
<span class="c1"># Drain: wait for all running tasks to finish</span>
|
|
538
|
+
<span class="k">for</span> <span class="n">f</span> <span class="ow">in</span> <span class="n">as_completed</span><span class="p">(</span><span class="nb">list</span><span class="p">(</span><span class="n">futures</span><span class="p">)):</span>
|
|
539
|
+
<span class="k">try</span><span class="p">:</span>
|
|
540
|
+
<span class="n">f</span><span class="o">.</span><span class="n">result</span><span class="p">()</span>
|
|
541
|
+
<span class="k">except</span> <span class="ne">Exception</span> <span class="k">as</span> <span class="n">e</span><span class="p">:</span>
|
|
542
|
+
<span class="nb">print</span><span class="p">(</span><span class="sa">f</span><span class="s2">"[watcher] Job raised: </span><span class="si">{</span><span class="n">e</span><span class="si">}</span><span class="s2">"</span><span class="p">,</span> <span class="n">file</span><span class="o">=</span><span class="n">sys</span><span class="o">.</span><span class="n">stderr</span><span class="p">)</span>
|
|
543
|
+
<span class="k">break</span>
|
|
544
|
+
|
|
545
|
+
<span class="k">if</span> <span class="ow">not</span> <span class="n">claimed_any</span><span class="p">:</span>
|
|
546
|
+
<span class="n">time</span><span class="o">.</span><span class="n">sleep</span><span class="p">(</span><span class="nb">max</span><span class="p">(</span><span class="mf">0.05</span><span class="p">,</span> <span class="n">args</span><span class="o">.</span><span class="n">poll_interval</span><span class="p">))</span>
|
|
547
|
+
|
|
548
|
+
<span class="nb">print</span><span class="p">(</span><span class="s2">"[watcher] Exiting"</span><span class="p">)</span>
|
|
549
|
+
<span class="k">return</span> <span class="mi">0</span></div>
|
|
550
|
+
|
|
551
|
+
|
|
552
|
+
|
|
553
|
+
<span class="k">if</span> <span class="vm">__name__</span> <span class="o">==</span> <span class="s2">"__main__"</span><span class="p">:</span>
|
|
554
|
+
<span class="n">sys</span><span class="o">.</span><span class="n">exit</span><span class="p">(</span><span class="n">main</span><span class="p">())</span>
|
|
555
|
+
</pre></div>
|
|
556
|
+
</article>
|
|
557
|
+
</div>
|
|
558
|
+
<footer>
|
|
559
|
+
|
|
560
|
+
<div class="related-pages">
|
|
561
|
+
|
|
562
|
+
|
|
563
|
+
</div>
|
|
564
|
+
<div class="bottom-of-page">
|
|
565
|
+
<div class="left-details">
|
|
566
|
+
<div class="copyright">
|
|
567
|
+
Copyright © 2026, Wolfgang Wenzel
|
|
568
|
+
</div>
|
|
569
|
+
Made with <a href="https://www.sphinx-doc.org/">Sphinx</a> and <a class="muted-link" href="https://pradyunsg.me">@pradyunsg</a>'s
|
|
570
|
+
|
|
571
|
+
<a href="https://github.com/pradyunsg/furo">Furo</a>
|
|
572
|
+
|
|
573
|
+
</div>
|
|
574
|
+
<div class="right-details">
|
|
575
|
+
|
|
576
|
+
</div>
|
|
577
|
+
</div>
|
|
578
|
+
|
|
579
|
+
</footer>
|
|
580
|
+
</div>
|
|
581
|
+
<aside class="toc-drawer no-toc">
|
|
582
|
+
|
|
583
|
+
|
|
584
|
+
|
|
585
|
+
</aside>
|
|
586
|
+
</div>
|
|
587
|
+
</div><script src="../../../_static/documentation_options.js?v=5929fcd5"></script>
|
|
588
|
+
<script src="../../../_static/doctools.js?v=fd6eb6e6"></script>
|
|
589
|
+
<script src="../../../_static/sphinx_highlight.js?v=6ffebe34"></script>
|
|
590
|
+
<script src="../../../_static/scripts/furo.js?v=46bd48cc"></script>
|
|
591
|
+
<script data-docs-built-at="2026-07-17 10:50:10 UTC" src="../../../_static/docs-build-badge.js?v=57cb9fc6"></script>
|
|
592
|
+
</body>
|
|
593
|
+
</html>
|