sequenzo 0.1.18__cp312-cp312-macosx_10_13_universal2.whl → 0.1.19__cp312-cp312-macosx_10_13_universal2.whl

sequenzo/dissimilarity_measures/src/eigen/unsupported/Eigen/CXX11/src/Tensor/TensorDimensions.h

@@ -1,490 +0,0 @@
-// This file is part of Eigen, a lightweight C++ template library
-// for linear algebra.
-//
-// Copyright (C) 2014 Benoit Steiner <benoit.steiner.goog@gmail.com>
-//
-// This Source Code Form is subject to the terms of the Mozilla
-// Public License v. 2.0. If a copy of the MPL was not distributed
-// with this file, You can obtain one at http://mozilla.org/MPL/2.0/.
-
-#ifndef EIGEN_CXX11_TENSOR_TENSOR_DIMENSIONS_H
-#define EIGEN_CXX11_TENSOR_TENSOR_DIMENSIONS_H
-
-
-namespace Eigen {
-
-/** \internal
-  *
-  * \class TensorDimensions
-  * \ingroup CXX11_Tensor_Module
-  *
-  * \brief Set of classes used to encode and store the dimensions of a Tensor.
-  *
-  * The Sizes class encodes as part of the type the number of dimensions and the
-  * sizes corresponding to each dimension. It uses no storage space since it is
-  * entirely known at compile time.
-  * The DSizes class is its dynamic sibling: the number of dimensions is known
-  * at compile time but the sizes are set during execution.
-  *
-  * \sa Tensor
-  */
-
-// Boilerplate code
-namespace internal {
-
-template<std::ptrdiff_t n, typename Dimension> struct dget {
-  static const std::ptrdiff_t value = get<n, Dimension>::value;
-};
-
-
-template<typename Index, std::ptrdiff_t NumIndices, std::ptrdiff_t n, bool RowMajor>
-struct fixed_size_tensor_index_linearization_helper
-{
-  template <typename Dimensions> EIGEN_DEVICE_FUNC
-  static EIGEN_STRONG_INLINE Index run(array<Index, NumIndices> const& indices,
-                          const Dimensions& dimensions)
-  {
-    return array_get<RowMajor ? n - 1 : (NumIndices - n)>(indices) +
-        dget<RowMajor ? n - 1 : (NumIndices - n), Dimensions>::value *
-        fixed_size_tensor_index_linearization_helper<Index, NumIndices, n - 1, RowMajor>::run(indices, dimensions);
-  }
-};
-
-template<typename Index, std::ptrdiff_t NumIndices, bool RowMajor>
-struct fixed_size_tensor_index_linearization_helper<Index, NumIndices, 0, RowMajor>
-{
-  template <typename Dimensions> EIGEN_DEVICE_FUNC
-  static EIGEN_STRONG_INLINE Index run(array<Index, NumIndices> const&, const Dimensions&)
-  {
-    return 0;
-  }
-};
-
-template<typename Index, std::ptrdiff_t n>
-struct fixed_size_tensor_index_extraction_helper
-{
-  template <typename Dimensions> EIGEN_DEVICE_FUNC
-  static EIGEN_STRONG_INLINE Index run(const Index index,
-                          const Dimensions& dimensions)
-  {
-    const Index mult = (index == n-1) ? 1 : 0;
-    return array_get<n-1>(dimensions) * mult +
-        fixed_size_tensor_index_extraction_helper<Index, n - 1>::run(index, dimensions);
-  }
-};
-
-template<typename Index>
-struct fixed_size_tensor_index_extraction_helper<Index, 0>
-{
-  template <typename Dimensions> EIGEN_DEVICE_FUNC
-  static EIGEN_STRONG_INLINE Index run(const Index,
-                          const Dimensions&)
-  {
-    return 0;
-  }
-  };
-
-}  // end namespace internal
-
-
-// Fixed size
-#ifndef EIGEN_EMULATE_CXX11_META_H
-template <typename std::ptrdiff_t... Indices>
-struct Sizes {
-  typedef internal::numeric_list<std::ptrdiff_t, Indices...> Base;
-  const Base t = Base();
-  static const std::ptrdiff_t total_size = internal::arg_prod(Indices...);
-  static const ptrdiff_t count = Base::count;
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t rank() const {
-    return Base::count;
-  }
-
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t TotalSize() {
-    return internal::arg_prod(Indices...);
-  }
-
-  EIGEN_DEVICE_FUNC Sizes() { }
-  template <typename DenseIndex>
-  explicit EIGEN_DEVICE_FUNC Sizes(const array<DenseIndex, Base::count>& /*indices*/) {
-    // todo: add assertion
-  }
-#if EIGEN_HAS_VARIADIC_TEMPLATES
-  template <typename... DenseIndex> EIGEN_DEVICE_FUNC Sizes(DenseIndex...) { }
-  explicit EIGEN_DEVICE_FUNC Sizes(std::initializer_list<std::ptrdiff_t> /*l*/) {
-    // todo: add assertion
-  }
-#endif
-
-  template <typename T> Sizes& operator = (const T& /*other*/) {
-    // add assertion failure if the size of other is different
-    return *this;
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t operator[] (const std::ptrdiff_t index) const {
-    return internal::fixed_size_tensor_index_extraction_helper<std::ptrdiff_t, Base::count>::run(index, t);
-  }
-
-  template <typename DenseIndex> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  ptrdiff_t IndexOfColMajor(const array<DenseIndex, Base::count>& indices) const {
-    return internal::fixed_size_tensor_index_linearization_helper<DenseIndex, Base::count, Base::count, false>::run(indices, t);
-  }
-  template <typename DenseIndex> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  ptrdiff_t IndexOfRowMajor(const array<DenseIndex, Base::count>& indices) const {
-    return internal::fixed_size_tensor_index_linearization_helper<DenseIndex, Base::count, Base::count, true>::run(indices, t);
-  }
-};
-
-namespace internal {
-template <typename std::ptrdiff_t... Indices>
-EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t array_prod(const Sizes<Indices...>&) {
-  return Sizes<Indices...>::total_size;
-}
-}
-
-#else
-
-template <std::ptrdiff_t n>
-struct non_zero_size {
-  typedef internal::type2val<std::ptrdiff_t, n> type;
-};
-template <>
-struct non_zero_size<0> {
-  typedef internal::null_type type;
-};
-
-template <std::ptrdiff_t V1=0, std::ptrdiff_t V2=0, std::ptrdiff_t V3=0, std::ptrdiff_t V4=0, std::ptrdiff_t V5=0> struct Sizes {
-  typedef typename internal::make_type_list<typename non_zero_size<V1>::type, typename non_zero_size<V2>::type, typename non_zero_size<V3>::type, typename non_zero_size<V4>::type, typename non_zero_size<V5>::type >::type Base;
-  static const std::ptrdiff_t count = Base::count;
-  static const std::ptrdiff_t total_size = internal::arg_prod<Base>::value;
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ptrdiff_t rank() const {
-    return count;
-  }
-
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE ptrdiff_t TotalSize() {
-    return internal::arg_prod<Base>::value;
-  }
-
-  Sizes() { }
-  template <typename DenseIndex>
-  explicit Sizes(const array<DenseIndex, Base::count>& /*indices*/) {
-    // todo: add assertion
-  }
-  template <typename T> Sizes& operator = (const T& /*other*/) {
-    // add assertion failure if the size of other is different
-    return *this;
-  }
-
-#if EIGEN_HAS_VARIADIC_TEMPLATES
-  template <typename... DenseIndex> Sizes(DenseIndex... /*indices*/) { }
-  explicit Sizes(std::initializer_list<std::ptrdiff_t>) {
-    // todo: add assertion
-  }
-#else
-  EIGEN_DEVICE_FUNC explicit Sizes(const DenseIndex) {
-  }
-  EIGEN_DEVICE_FUNC Sizes(const DenseIndex, const DenseIndex) {
-  }
-  EIGEN_DEVICE_FUNC Sizes(const DenseIndex, const DenseIndex, const DenseIndex) {
-  }
-  EIGEN_DEVICE_FUNC Sizes(const DenseIndex, const DenseIndex, const DenseIndex, const DenseIndex) {
-  }
-  EIGEN_DEVICE_FUNC Sizes(const DenseIndex, const DenseIndex, const DenseIndex, const DenseIndex, const DenseIndex) {
-  }
-#endif
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Index operator[] (const Index index) const {
-    switch (index) {
-      case 0:
-        return internal::get<0, Base>::value;
-      case 1:
-        return internal::get<1, Base>::value;
-      case 2:
-        return internal::get<2, Base>::value;
-      case 3:
-        return internal::get<3, Base>::value;
-      case 4:
-        return internal::get<4, Base>::value;
-      default:
-        eigen_assert(false && "index overflow");
-        return static_cast<Index>(-1);
-    }
-  }
-
-  template <typename DenseIndex> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  ptrdiff_t IndexOfColMajor(const array<DenseIndex, Base::count>& indices) const {
-    return internal::fixed_size_tensor_index_linearization_helper<DenseIndex, Base::count, Base::count, false>::run(indices, *reinterpret_cast<const Base*>(this));
-  }
-  template <typename DenseIndex> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  ptrdiff_t IndexOfRowMajor(const array<DenseIndex, Base::count>& indices) const {
-    return internal::fixed_size_tensor_index_linearization_helper<DenseIndex, Base::count, Base::count, true>::run(indices, *reinterpret_cast<const Base*>(this));
-  }
-};
-
-namespace internal {
-template <std::ptrdiff_t V1, std::ptrdiff_t V2, std::ptrdiff_t V3, std::ptrdiff_t V4, std::ptrdiff_t V5>
-EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t array_prod(const Sizes<V1, V2, V3, V4, V5>&) {
-  return Sizes<V1, V2, V3, V4, V5>::total_size;
-}
-}
-
-#endif
-
-// Boilerplate
-namespace internal {
-template<typename Index, std::ptrdiff_t NumIndices, std::ptrdiff_t n, bool RowMajor>
-struct tensor_index_linearization_helper
-{
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  Index run(array<Index, NumIndices> const& indices, array<Index, NumIndices> const& dimensions)
-  {
-    return array_get<RowMajor ? n : (NumIndices - n - 1)>(indices) +
-      array_get<RowMajor ? n : (NumIndices - n - 1)>(dimensions) *
-        tensor_index_linearization_helper<Index, NumIndices, n - 1, RowMajor>::run(indices, dimensions);
-  }
-};
-
-template<typename Index, std::ptrdiff_t NumIndices, bool RowMajor>
-struct tensor_index_linearization_helper<Index, NumIndices, 0, RowMajor>
-{
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  Index run(array<Index, NumIndices> const& indices, array<Index, NumIndices> const&)
-  {
-    return array_get<RowMajor ? 0 : NumIndices - 1>(indices);
-  }
-};
-}  // end namespace internal
-
-
-
-// Dynamic size
-template <typename DenseIndex, int NumDims>
-struct DSizes : array<DenseIndex, NumDims> {
-  typedef array<DenseIndex, NumDims> Base;
-  static const int count = NumDims;
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE Index rank() const {
-    return NumDims;
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DenseIndex TotalSize() const {
-    return (NumDims == 0) ? 1 : internal::array_prod(*static_cast<const Base*>(this));
-  }
-
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DSizes() {
-    for (int i = 0 ; i < NumDims; ++i) {
-      (*this)[i] = 0;
-    }
-  }
-  EIGEN_DEVICE_FUNC explicit DSizes(const array<DenseIndex, NumDims>& a) : Base(a) { }
-
-  EIGEN_DEVICE_FUNC explicit DSizes(const DenseIndex i0) {
-    eigen_assert(NumDims == 1);
-    (*this)[0] = i0;
-  }
-
-  EIGEN_DEVICE_FUNC DSizes(const DimensionList<DenseIndex, NumDims>& a) {
-    for (int i = 0 ; i < NumDims; ++i) {
-      (*this)[i] = a[i];
-    }
-  }
-
-  // Enable DSizes index type promotion only if we are promoting to the
-  // larger type, e.g. allow to promote dimensions of type int to long.
-  template<typename OtherIndex>
-  EIGEN_DEVICE_FUNC
-  explicit DSizes(const array<OtherIndex, NumDims>& other,
-                  // Default template parameters require c++11.
-                  typename internal::enable_if<
-                     internal::is_same<
-                         DenseIndex,
-                         typename internal::promote_index_type<
-                             DenseIndex,
-                             OtherIndex
-                         >::type
-                     >::value, void*>::type = 0) {
-    for (int i = 0; i < NumDims; ++i) {
-      (*this)[i] = static_cast<DenseIndex>(other[i]);
-    }
-  }
-
-#ifdef EIGEN_HAS_INDEX_LIST
-  template <typename FirstType, typename... OtherTypes>
-  EIGEN_DEVICE_FUNC
-  explicit DSizes(const Eigen::IndexList<FirstType, OtherTypes...>& dimensions) {
-    for (int i = 0; i < dimensions.count; ++i) {
-      (*this)[i] = dimensions[i];
-    }
-  }
-#endif
-
-#ifndef EIGEN_EMULATE_CXX11_META_H
-  template <typename std::ptrdiff_t... Indices>
-  EIGEN_DEVICE_FUNC DSizes(const Sizes<Indices...>& a) {
-    for (int i = 0 ; i < NumDims; ++i) {
-      (*this)[i] = a[i];
-    }
-  }
-#else
-  template <std::ptrdiff_t V1, std::ptrdiff_t V2, std::ptrdiff_t V3, std::ptrdiff_t V4, std::ptrdiff_t V5>
-  EIGEN_DEVICE_FUNC DSizes(const Sizes<V1, V2, V3, V4, V5>& a) {
-    for (int i = 0 ; i < NumDims; ++i) {
-      (*this)[i] = a[i];
-    }
-  }
-#endif
-
-#if EIGEN_HAS_VARIADIC_TEMPLATES
-  template<typename... IndexTypes> EIGEN_DEVICE_FUNC
-  EIGEN_STRONG_INLINE explicit DSizes(DenseIndex firstDimension, DenseIndex secondDimension, IndexTypes... otherDimensions) : Base({{firstDimension, secondDimension, otherDimensions...}}) {
-    EIGEN_STATIC_ASSERT(sizeof...(otherDimensions) + 2 == NumDims, YOU_MADE_A_PROGRAMMING_MISTAKE)
-  }
-#else
-  EIGEN_DEVICE_FUNC DSizes(const DenseIndex i0, const DenseIndex i1) {
-    eigen_assert(NumDims == 2);
-    (*this)[0] = i0;
-    (*this)[1] = i1;
-  }
-  EIGEN_DEVICE_FUNC DSizes(const DenseIndex i0, const DenseIndex i1, const DenseIndex i2) {
-    eigen_assert(NumDims == 3);
-    (*this)[0] = i0;
-    (*this)[1] = i1;
-    (*this)[2] = i2;
-  }
-  EIGEN_DEVICE_FUNC DSizes(const DenseIndex i0, const DenseIndex i1, const DenseIndex i2, const DenseIndex i3) {
-    eigen_assert(NumDims == 4);
-    (*this)[0] = i0;
-    (*this)[1] = i1;
-    (*this)[2] = i2;
-    (*this)[3] = i3;
-  }
-  EIGEN_DEVICE_FUNC DSizes(const DenseIndex i0, const DenseIndex i1, const DenseIndex i2, const DenseIndex i3, const DenseIndex i4) {
-    eigen_assert(NumDims == 5);
-    (*this)[0] = i0;
-    (*this)[1] = i1;
-    (*this)[2] = i2;
-    (*this)[3] = i3;
-    (*this)[4] = i4;
-  }
-#endif
-
-  EIGEN_DEVICE_FUNC DSizes& operator = (const array<DenseIndex, NumDims>& other) {
-    *static_cast<Base*>(this) = other;
-    return *this;
-  }
-
-  // A constexpr would be so much better here
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DenseIndex IndexOfColMajor(const array<DenseIndex, NumDims>& indices) const {
-    return internal::tensor_index_linearization_helper<DenseIndex, NumDims, NumDims - 1, false>::run(indices, *static_cast<const Base*>(this));
-  }
-  EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE DenseIndex IndexOfRowMajor(const array<DenseIndex, NumDims>& indices) const {
-    return internal::tensor_index_linearization_helper<DenseIndex, NumDims, NumDims - 1, true>::run(indices, *static_cast<const Base*>(this));
-  }
-};
-
-template <typename IndexType, int NumDims>
-std::ostream& operator<<(std::ostream& os,
-                         const DSizes<IndexType, NumDims>& dims) {
-  os << "[";
-  for (int i = 0; i < NumDims; ++i) {
-    if (i > 0) os << ", ";
-    os << dims[i];
-  }
-  os << "]";
-  return os;
-}
-
-// Boilerplate
-namespace internal {
-template<typename Index, std::ptrdiff_t NumIndices, std::ptrdiff_t n, bool RowMajor>
-struct tensor_vsize_index_linearization_helper
-{
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  Index run(array<Index, NumIndices> const& indices, std::vector<DenseIndex> const& dimensions)
-  {
-    return array_get<RowMajor ? n : (NumIndices - n - 1)>(indices) +
-      array_get<RowMajor ? n : (NumIndices - n - 1)>(dimensions) *
-        tensor_vsize_index_linearization_helper<Index, NumIndices, n - 1, RowMajor>::run(indices, dimensions);
-  }
-};
-
-template<typename Index, std::ptrdiff_t NumIndices, bool RowMajor>
-struct tensor_vsize_index_linearization_helper<Index, NumIndices, 0, RowMajor>
-{
-  static EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE
-  Index run(array<Index, NumIndices> const& indices, std::vector<DenseIndex> const&)
-  {
-    return array_get<RowMajor ? 0 : NumIndices - 1>(indices);
-  }
-};
-}  // end namespace internal
-
-
-namespace internal {
-
-template <typename DenseIndex, int NumDims> struct array_size<const DSizes<DenseIndex, NumDims> > {
-  static const ptrdiff_t value = NumDims;
-};
-template <typename DenseIndex, int NumDims> struct array_size<DSizes<DenseIndex, NumDims> > {
-  static const ptrdiff_t value = NumDims;
-};
-#ifndef EIGEN_EMULATE_CXX11_META_H
-template <typename std::ptrdiff_t... Indices> struct array_size<const Sizes<Indices...> > {
-static const std::ptrdiff_t value = Sizes<Indices...>::count;
-};
-template <typename std::ptrdiff_t... Indices> struct array_size<Sizes<Indices...> > {
-static const std::ptrdiff_t value = Sizes<Indices...>::count;
-};
-template <std::ptrdiff_t n, typename std::ptrdiff_t... Indices> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t array_get(const Sizes<Indices...>&) {
-  return get<n, internal::numeric_list<std::ptrdiff_t, Indices...> >::value;
-}
-template <std::ptrdiff_t n> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t array_get(const Sizes<>&) {
-  eigen_assert(false && "should never be called");
-  return -1;
-}
-#else
-template <std::ptrdiff_t V1, std::ptrdiff_t V2, std::ptrdiff_t V3, std::ptrdiff_t V4, std::ptrdiff_t V5> struct array_size<const Sizes<V1,V2,V3,V4,V5> > {
-  static const ptrdiff_t value = Sizes<V1,V2,V3,V4,V5>::count;
-};
-template <std::ptrdiff_t V1, std::ptrdiff_t V2, std::ptrdiff_t V3, std::ptrdiff_t V4, std::ptrdiff_t V5> struct array_size<Sizes<V1,V2,V3,V4,V5> > {
-  static const ptrdiff_t value = Sizes<V1,V2,V3,V4,V5>::count;
-};
-template <std::ptrdiff_t n, std::ptrdiff_t V1, std::ptrdiff_t V2, std::ptrdiff_t V3, std::ptrdiff_t V4, std::ptrdiff_t V5> EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE std::ptrdiff_t array_get(const Sizes<V1,V2,V3,V4,V5>&) {
-  return get<n, typename Sizes<V1,V2,V3,V4,V5>::Base>::value;
-}
-
-#endif
-
-
-template <typename Dims1, typename Dims2, ptrdiff_t n, ptrdiff_t m>
-struct sizes_match_below_dim {
-  static EIGEN_DEVICE_FUNC  EIGEN_STRONG_INLINE bool run(Dims1&, Dims2&) {
-    return false;
-  }
-};
-template <typename Dims1, typename Dims2, ptrdiff_t n>
-struct sizes_match_below_dim<Dims1, Dims2, n, n> {
-  static EIGEN_DEVICE_FUNC  EIGEN_STRONG_INLINE bool run(Dims1& dims1, Dims2& dims2) {
-    return (array_get<n-1>(dims1) == array_get<n-1>(dims2)) &&
-        sizes_match_below_dim<Dims1, Dims2, n-1, n-1>::run(dims1, dims2);
-  }
-};
-template <typename Dims1, typename Dims2>
-struct sizes_match_below_dim<Dims1, Dims2, 0, 0> {
-  static EIGEN_DEVICE_FUNC  EIGEN_STRONG_INLINE bool run(Dims1&, Dims2&) {
-    return true;
-  }
-};
-
-} // end namespace internal
-
-
-template <typename Dims1, typename Dims2>
-EIGEN_DEVICE_FUNC EIGEN_ALWAYS_INLINE bool dimensions_match(Dims1 dims1, Dims2 dims2) {
-  return internal::sizes_match_below_dim<Dims1, Dims2, internal::array_size<Dims1>::value, internal::array_size<Dims2>::value>::run(dims1, dims2);
-}
-
-} // end namespace Eigen
-
-#endif // EIGEN_CXX11_TENSOR_TENSOR_DIMENSIONS_H