nabu 2024.1.1__py3-none-any.whl → 2024.1.2__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- nabu/__init__.py +1 -1
- nabu/app/cast_volume.py +11 -2
- nabu/app/multicor.py +24 -2
- nabu/io/cast_volume.py +3 -3
- nabu/io/utils.py +2 -2
- nabu/stitching/tests/test_z_stitching.py +0 -1
- nabu/stitching/z_stitching.py +3 -3
- {nabu-2024.1.1.dist-info → nabu-2024.1.2.dist-info}/METADATA +2 -2
- nabu-2024.1.2.dist-info/RECORD +296 -0
- {nabu-2024.1.1.dist-info → nabu-2024.1.2.dist-info}/WHEEL +1 -1
- nabu-2024.1.2.dist-info/top_level.txt +2 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/doc/conf.py +0 -137
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/doc/create_conf_doc.py +0 -38
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/doc/get_mathjax.py +0 -34
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/__init__.py +0 -17
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/bootstrap.py +0 -88
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/bootstrap_stitching.py +0 -69
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/cast_volume.py +0 -272
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/cli_configs.py +0 -626
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/compare_volumes.py +0 -94
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/composite_cor.py +0 -144
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/correct_rot.py +0 -70
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/create_distortion_map_from_poly.py +0 -153
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/diag_to_pix.py +0 -358
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/diag_to_rot.py +0 -449
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/double_flatfield.py +0 -143
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/generate_header.py +0 -261
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/histogram.py +0 -197
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/multicor.py +0 -90
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/nx_z_splitter.py +0 -125
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/parse_reconstruction_log.py +0 -151
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/prepare_weights_double.py +0 -163
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/reconstruct.py +0 -120
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/reconstruct_helical.py +0 -116
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/reduce_dark_flat.py +0 -181
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/rotate.py +0 -162
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/shrink_dataset.py +0 -98
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/stitching.py +0 -85
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/tests/test_reduce_dark_flat.py +0 -78
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/utils.py +0 -33
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app/validator.py +0 -110
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/convolution.py +0 -8
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/fft.py +0 -4
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/kernel.py +0 -97
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/medfilt.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/padding.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/processing.py +0 -75
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/tests/__init__.py +0 -1
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/cuda/utils.py +0 -331
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/__init__.py +0 -12
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/alignment.py +0 -578
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/cor.py +0 -1621
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/cor_sino.py +0 -183
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/distortion.py +0 -112
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/focus.py +0 -362
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/test_alignment.py +0 -70
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/test_cor.py +0 -472
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/test_focus.py +0 -105
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/test_tilt.py +0 -41
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tests/test_translation.py +0 -78
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/tilt.py +0 -214
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/translation.py +0 -193
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/estimation/utils.py +0 -39
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/__init__.py +0 -2
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/cast_volume.py +0 -371
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/detector_distortion.py +0 -305
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/reader.py +0 -628
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/reader_helical.py +0 -114
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/tests/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/tests/test_cast_volume.py +0 -339
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/tests/test_detector_distortion.py +0 -178
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/tests/test_writers.py +0 -187
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/tiffwriter_zmm.py +0 -99
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/utils.py +0 -263
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/io/writer.py +0 -892
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/binning.py +0 -98
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/fftshift.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/filters.py +0 -24
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/fourier_filters.py +0 -152
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/histogram.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/histogram_cuda.py +0 -8
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/kernel_base.py +0 -4
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/padding.py +0 -83
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/padding_base.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/processing_base.py +0 -4
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/rotation.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/rotation_cuda.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/tests/__init__.py +0 -1
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/tests/test_binning.py +0 -48
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/tests/test_interpolation.py +0 -70
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/transpose.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/unsharp.py +0 -4
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/unsharp_cuda.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/unsharp_opencl.py +0 -8
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/misc/utils.py +0 -117
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/fft.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/kernel.py +0 -135
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/memcpy.py +0 -35
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/padding.py +0 -6
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/processing.py +0 -62
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/tests/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/opencl/utils.py +0 -292
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/config.py +0 -265
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/config_validators.py +0 -589
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/datadump.py +0 -164
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/dataset_validator.py +0 -211
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/detector_distortion_provider.py +0 -20
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/estimators.py +0 -1012
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fallback_utils.py +0 -149
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/chunked.py +0 -849
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/chunked_cuda.py +0 -152
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/computations.py +0 -260
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/dataset_validator.py +0 -63
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/nabu_config.py +0 -590
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/processconfig.py +0 -825
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/fullfield/reconstruction.py +0 -851
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/dataset_validator.py +0 -19
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/fbp.py +0 -147
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/filtering.py +0 -246
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/gridded_accumulator.py +0 -575
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/helical_chunked_regridded.py +0 -1670
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/helical_chunked_regridded_cuda.py +0 -119
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/helical_reconstruction.py +0 -598
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/helical_utils.py +0 -42
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/nabu_config.py +0 -175
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/processconfig.py +0 -62
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/span_strategy.py +0 -483
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/tests/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/tests/test_accumulator.py +0 -157
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/tests/test_pipeline_elements_full.py +0 -355
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/tests/test_strategy.py +0 -61
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/utils.py +0 -51
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/helical/weight_balancer.py +0 -101
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/params.py +0 -163
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/processconfig.py +0 -210
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/tests/test_chunk_reader.py +0 -78
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/tests/test_estimators.py +0 -149
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/utils.py +0 -116
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/writer.py +0 -193
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/pipeline/xrdct/__init__.py +0 -0
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/__init__.py +0 -7
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/alignment.py +0 -11
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/ccd.py +0 -161
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/ccd_cuda.py +0 -169
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/ctf.py +0 -361
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/ctf_cuda.py +0 -142
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/distortion.py +0 -92
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/double_flatfield.py +0 -212
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/double_flatfield_cuda.py +0 -174
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/double_flatfield_variable_region.py +0 -68
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/flatfield.py +0 -448
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/flatfield_cuda.py +0 -144
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/flatfield_variable_region.py +0 -79
- build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/preproc/phase.py +0 -425
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- build/lib/nabu/app/nx_z_splitter.py +0 -125
- build/lib/nabu/app/parse_reconstruction_log.py +0 -151
- build/lib/nabu/app/prepare_weights_double.py +0 -163
- build/lib/nabu/app/reconstruct.py +0 -120
- build/lib/nabu/app/reconstruct_helical.py +0 -116
- build/lib/nabu/app/reduce_dark_flat.py +0 -181
- build/lib/nabu/app/rotate.py +0 -162
- build/lib/nabu/app/shrink_dataset.py +0 -98
- build/lib/nabu/app/stitching.py +0 -85
- build/lib/nabu/app/tests/test_reduce_dark_flat.py +0 -78
- build/lib/nabu/app/utils.py +0 -33
- build/lib/nabu/app/validator.py +0 -110
- build/lib/nabu/cuda/__init__.py +0 -0
- build/lib/nabu/cuda/convolution.py +0 -8
- build/lib/nabu/cuda/fft.py +0 -4
- build/lib/nabu/cuda/kernel.py +0 -97
- build/lib/nabu/cuda/medfilt.py +0 -6
- build/lib/nabu/cuda/padding.py +0 -6
- build/lib/nabu/cuda/processing.py +0 -75
- build/lib/nabu/cuda/tests/__init__.py +0 -1
- build/lib/nabu/cuda/utils.py +0 -331
- build/lib/nabu/estimation/__init__.py +0 -12
- build/lib/nabu/estimation/alignment.py +0 -578
- build/lib/nabu/estimation/cor.py +0 -1621
- build/lib/nabu/estimation/cor_sino.py +0 -183
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- build/lib/nabu/estimation/focus.py +0 -362
- build/lib/nabu/estimation/tests/__init__.py +0 -0
- build/lib/nabu/estimation/tests/test_alignment.py +0 -70
- build/lib/nabu/estimation/tests/test_cor.py +0 -472
- build/lib/nabu/estimation/tests/test_focus.py +0 -105
- build/lib/nabu/estimation/tests/test_tilt.py +0 -41
- build/lib/nabu/estimation/tests/test_translation.py +0 -78
- build/lib/nabu/estimation/tilt.py +0 -214
- build/lib/nabu/estimation/translation.py +0 -193
- build/lib/nabu/estimation/utils.py +0 -39
- build/lib/nabu/io/__init__.py +0 -2
- build/lib/nabu/io/cast_volume.py +0 -371
- build/lib/nabu/io/detector_distortion.py +0 -305
- build/lib/nabu/io/reader.py +0 -628
- build/lib/nabu/io/reader_helical.py +0 -114
- build/lib/nabu/io/tests/__init__.py +0 -0
- build/lib/nabu/io/tests/test_cast_volume.py +0 -339
- build/lib/nabu/io/tests/test_detector_distortion.py +0 -178
- build/lib/nabu/io/tests/test_writers.py +0 -187
- build/lib/nabu/io/tiffwriter_zmm.py +0 -99
- build/lib/nabu/io/utils.py +0 -263
- build/lib/nabu/io/writer.py +0 -892
- build/lib/nabu/misc/__init__.py +0 -0
- build/lib/nabu/misc/binning.py +0 -98
- build/lib/nabu/misc/fftshift.py +0 -6
- build/lib/nabu/misc/filters.py +0 -24
- build/lib/nabu/misc/fourier_filters.py +0 -152
- build/lib/nabu/misc/histogram.py +0 -6
- build/lib/nabu/misc/histogram_cuda.py +0 -8
- build/lib/nabu/misc/kernel_base.py +0 -4
- build/lib/nabu/misc/padding.py +0 -83
- build/lib/nabu/misc/padding_base.py +0 -6
- build/lib/nabu/misc/processing_base.py +0 -4
- build/lib/nabu/misc/rotation.py +0 -6
- build/lib/nabu/misc/rotation_cuda.py +0 -6
- build/lib/nabu/misc/tests/__init__.py +0 -1
- build/lib/nabu/misc/tests/test_binning.py +0 -48
- build/lib/nabu/misc/tests/test_interpolation.py +0 -70
- build/lib/nabu/misc/transpose.py +0 -6
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- build/lib/nabu/misc/utils.py +0 -117
- build/lib/nabu/opencl/__init__.py +0 -0
- build/lib/nabu/opencl/fft.py +0 -6
- build/lib/nabu/opencl/kernel.py +0 -135
- build/lib/nabu/opencl/memcpy.py +0 -35
- build/lib/nabu/opencl/padding.py +0 -6
- build/lib/nabu/opencl/processing.py +0 -62
- build/lib/nabu/opencl/tests/__init__.py +0 -0
- build/lib/nabu/opencl/utils.py +0 -292
- build/lib/nabu/pipeline/__init__.py +0 -0
- build/lib/nabu/pipeline/config.py +0 -265
- build/lib/nabu/pipeline/config_validators.py +0 -589
- build/lib/nabu/pipeline/datadump.py +0 -164
- build/lib/nabu/pipeline/dataset_validator.py +0 -211
- build/lib/nabu/pipeline/detector_distortion_provider.py +0 -20
- build/lib/nabu/pipeline/estimators.py +0 -1012
- build/lib/nabu/pipeline/fallback_utils.py +0 -149
- build/lib/nabu/pipeline/fullfield/__init__.py +0 -0
- build/lib/nabu/pipeline/fullfield/chunked.py +0 -849
- build/lib/nabu/pipeline/fullfield/chunked_cuda.py +0 -152
- build/lib/nabu/pipeline/fullfield/computations.py +0 -260
- build/lib/nabu/pipeline/fullfield/dataset_validator.py +0 -63
- build/lib/nabu/pipeline/fullfield/nabu_config.py +0 -590
- build/lib/nabu/pipeline/fullfield/processconfig.py +0 -825
- build/lib/nabu/pipeline/fullfield/reconstruction.py +0 -851
- build/lib/nabu/pipeline/helical/__init__.py +0 -0
- build/lib/nabu/pipeline/helical/dataset_validator.py +0 -19
- build/lib/nabu/pipeline/helical/fbp.py +0 -147
- build/lib/nabu/pipeline/helical/filtering.py +0 -246
- build/lib/nabu/pipeline/helical/gridded_accumulator.py +0 -575
- build/lib/nabu/pipeline/helical/helical_chunked_regridded.py +0 -1670
- build/lib/nabu/pipeline/helical/helical_chunked_regridded_cuda.py +0 -119
- build/lib/nabu/pipeline/helical/helical_reconstruction.py +0 -598
- build/lib/nabu/pipeline/helical/helical_utils.py +0 -42
- build/lib/nabu/pipeline/helical/nabu_config.py +0 -175
- build/lib/nabu/pipeline/helical/processconfig.py +0 -62
- build/lib/nabu/pipeline/helical/span_strategy.py +0 -483
- build/lib/nabu/pipeline/helical/tests/__init__.py +0 -0
- build/lib/nabu/pipeline/helical/tests/test_accumulator.py +0 -157
- build/lib/nabu/pipeline/helical/tests/test_pipeline_elements_full.py +0 -355
- build/lib/nabu/pipeline/helical/tests/test_strategy.py +0 -61
- build/lib/nabu/pipeline/helical/utils.py +0 -51
- build/lib/nabu/pipeline/helical/weight_balancer.py +0 -101
- build/lib/nabu/pipeline/params.py +0 -163
- build/lib/nabu/pipeline/processconfig.py +0 -210
- build/lib/nabu/pipeline/tests/test_chunk_reader.py +0 -78
- build/lib/nabu/pipeline/tests/test_estimators.py +0 -149
- build/lib/nabu/pipeline/utils.py +0 -116
- build/lib/nabu/pipeline/writer.py +0 -193
- build/lib/nabu/pipeline/xrdct/__init__.py +0 -0
- build/lib/nabu/preproc/__init__.py +0 -7
- build/lib/nabu/preproc/alignment.py +0 -11
- build/lib/nabu/preproc/ccd.py +0 -161
- build/lib/nabu/preproc/ccd_cuda.py +0 -169
- build/lib/nabu/preproc/ctf.py +0 -361
- build/lib/nabu/preproc/ctf_cuda.py +0 -142
- build/lib/nabu/preproc/distortion.py +0 -92
- build/lib/nabu/preproc/double_flatfield.py +0 -212
- build/lib/nabu/preproc/double_flatfield_cuda.py +0 -174
- build/lib/nabu/preproc/double_flatfield_variable_region.py +0 -68
- build/lib/nabu/preproc/flatfield.py +0 -448
- build/lib/nabu/preproc/flatfield_cuda.py +0 -144
- build/lib/nabu/preproc/flatfield_variable_region.py +0 -79
- build/lib/nabu/preproc/phase.py +0 -425
- build/lib/nabu/preproc/phase_cuda.py +0 -143
- build/lib/nabu/preproc/shift.py +0 -95
- build/lib/nabu/preproc/shift_cuda.py +0 -102
- build/lib/nabu/preproc/tests/__init__.py +0 -1
- build/lib/nabu/preproc/tests/test_ccd_corr.py +0 -59
- build/lib/nabu/preproc/tests/test_ctf.py +0 -250
- build/lib/nabu/preproc/tests/test_double_flatfield.py +0 -86
- build/lib/nabu/preproc/tests/test_flatfield.py +0 -626
- build/lib/nabu/preproc/tests/test_paganin.py +0 -67
- build/lib/nabu/preproc/tests/test_vshift.py +0 -73
- build/lib/nabu/processing/__init__.py +0 -0
- build/lib/nabu/processing/convolution_cuda.py +0 -375
- build/lib/nabu/processing/fft_base.py +0 -163
- build/lib/nabu/processing/fft_cuda.py +0 -256
- build/lib/nabu/processing/fft_opencl.py +0 -54
- build/lib/nabu/processing/fftshift.py +0 -134
- build/lib/nabu/processing/histogram.py +0 -286
- build/lib/nabu/processing/histogram_cuda.py +0 -103
- build/lib/nabu/processing/kernel_base.py +0 -126
- build/lib/nabu/processing/medfilt_cuda.py +0 -159
- build/lib/nabu/processing/muladd.py +0 -29
- build/lib/nabu/processing/muladd_cuda.py +0 -68
- build/lib/nabu/processing/padding_base.py +0 -71
- build/lib/nabu/processing/padding_cuda.py +0 -75
- build/lib/nabu/processing/padding_opencl.py +0 -77
- build/lib/nabu/processing/processing_base.py +0 -123
- build/lib/nabu/processing/roll_opencl.py +0 -64
- build/lib/nabu/processing/rotation.py +0 -63
- build/lib/nabu/processing/rotation_cuda.py +0 -66
- build/lib/nabu/processing/tests/__init__.py +0 -0
- build/lib/nabu/processing/tests/test_fft.py +0 -268
- build/lib/nabu/processing/tests/test_fftshift.py +0 -71
- build/lib/nabu/processing/tests/test_histogram.py +0 -55
- build/lib/nabu/processing/tests/test_medfilt.py +0 -77
- build/lib/nabu/processing/tests/test_muladd.py +0 -54
- build/lib/nabu/processing/tests/test_padding.py +0 -247
- build/lib/nabu/processing/tests/test_roll.py +0 -63
- build/lib/nabu/processing/tests/test_rotation.py +0 -83
- build/lib/nabu/processing/tests/test_transpose.py +0 -72
- build/lib/nabu/processing/tests/test_unsharp.py +0 -106
- build/lib/nabu/processing/transpose.py +0 -126
- build/lib/nabu/processing/unsharp.py +0 -79
- build/lib/nabu/processing/unsharp_cuda.py +0 -53
- build/lib/nabu/processing/unsharp_opencl.py +0 -75
- build/lib/nabu/reconstruction/__init__.py +0 -3
- build/lib/nabu/reconstruction/cone.py +0 -241
- build/lib/nabu/reconstruction/fbp.py +0 -124
- build/lib/nabu/reconstruction/fbp_base.py +0 -391
- build/lib/nabu/reconstruction/fbp_opencl.py +0 -78
- build/lib/nabu/reconstruction/filtering.py +0 -220
- build/lib/nabu/reconstruction/filtering_cuda.py +0 -103
- build/lib/nabu/reconstruction/filtering_opencl.py +0 -111
- build/lib/nabu/reconstruction/projection.py +0 -240
- build/lib/nabu/reconstruction/reconstructor.py +0 -174
- build/lib/nabu/reconstruction/reconstructor_cuda.py +0 -44
- build/lib/nabu/reconstruction/rings.py +0 -248
- build/lib/nabu/reconstruction/rings_cuda.py +0 -322
- build/lib/nabu/reconstruction/sinogram.py +0 -467
- build/lib/nabu/reconstruction/sinogram_cuda.py +0 -250
- build/lib/nabu/reconstruction/sinogram_opencl.py +0 -40
- build/lib/nabu/reconstruction/tests/__init__.py +0 -1
- build/lib/nabu/reconstruction/tests/test_cone.py +0 -308
- build/lib/nabu/reconstruction/tests/test_deringer.py +0 -220
- build/lib/nabu/reconstruction/tests/test_fbp.py +0 -252
- build/lib/nabu/reconstruction/tests/test_filtering.py +0 -133
- build/lib/nabu/reconstruction/tests/test_halftomo.py +0 -100
- build/lib/nabu/reconstruction/tests/test_projector.py +0 -164
- build/lib/nabu/reconstruction/tests/test_reconstructor.py +0 -93
- build/lib/nabu/reconstruction/tests/test_sino_normalization.py +0 -85
- build/lib/nabu/resources/__init__.py +0 -0
- build/lib/nabu/resources/cli/__init__.py +0 -0
- build/lib/nabu/resources/cor.py +0 -5
- build/lib/nabu/resources/dataset_analyzer.py +0 -469
- build/lib/nabu/resources/gpu.py +0 -169
- build/lib/nabu/resources/logger.py +0 -130
- build/lib/nabu/resources/nxflatfield.py +0 -217
- build/lib/nabu/resources/templates/__init__.py +0 -0
- build/lib/nabu/resources/tests/__init__.py +0 -0
- build/lib/nabu/resources/tests/test_nxflatfield.py +0 -104
- build/lib/nabu/resources/tests/test_units.py +0 -47
- build/lib/nabu/resources/utils.py +0 -174
- build/lib/nabu/stitching/__init__.py +0 -0
- build/lib/nabu/stitching/alignment.py +0 -184
- build/lib/nabu/stitching/config.py +0 -1286
- build/lib/nabu/stitching/definitions.py +0 -6
- build/lib/nabu/stitching/frame_composition.py +0 -155
- build/lib/nabu/stitching/overlap.py +0 -373
- build/lib/nabu/stitching/sample_normalization.py +0 -60
- build/lib/nabu/stitching/slurm_utils.py +0 -204
- build/lib/nabu/stitching/tests/__init__.py +0 -0
- build/lib/nabu/stitching/tests/test_alignment.py +0 -99
- build/lib/nabu/stitching/tests/test_config.py +0 -226
- build/lib/nabu/stitching/tests/test_frame_composition.py +0 -180
- build/lib/nabu/stitching/tests/test_overlap.py +0 -98
- build/lib/nabu/stitching/tests/test_sample_normalization.py +0 -49
- build/lib/nabu/stitching/tests/test_slurm_utils.py +0 -146
- build/lib/nabu/stitching/tests/test_utils.py +0 -21
- build/lib/nabu/stitching/tests/test_z_stitching.py +0 -1183
- build/lib/nabu/stitching/utils.py +0 -563
- build/lib/nabu/stitching/z_stitching.py +0 -2279
- build/lib/nabu/tests.py +0 -51
- build/lib/nabu/testutils.py +0 -375
- build/lib/nabu/thirdparty/__init__.py +0 -0
- build/lib/nabu/thirdparty/algotom_convert_sino.py +0 -276
- build/lib/nabu/thirdparty/pore3d_deringer_munch.py +0 -108
- build/lib/nabu/thirdparty/tomocupy_remove_stripe.py +0 -586
- build/lib/nabu/thirdparty/tomopy_phase.py +0 -239
- build/lib/nabu/thirdparty/tomwer_load_flats_darks.py +0 -162
- build/lib/nabu/utils.py +0 -836
- nabu-2024.1.1.dist-info/RECORD +0 -2375
- nabu-2024.1.1.dist-info/top_level.txt +0 -4
- {build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/build/lib/nabu/app → nabu/app/tests}/__init__.py +0 -0
- {nabu-2024.1.1.dist-info → nabu-2024.1.2.dist-info}/LICENSE +0 -0
- {nabu-2024.1.1.dist-info → nabu-2024.1.2.dist-info}/entry_points.txt +0 -0
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from ..fullfield.nabu_config import *
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## keep the text below for future inclusion in the documentation
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# start_z, end_z , start_z_mm, end_z_mm
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# ----------------------------------------------------------------
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# By default, all the volume is reconstructed slice by slice, along the axis 'z'.
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# ** option 1) you can set
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# start_z_mm=0
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# end_z_mm = 0
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#
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# Now, concerning start_z and end_z, Use positive integers, with start_z < end_z
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# The reconstructed vertical region will be
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# slice start = first doable + start_z
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# slice end = first doable + end_z
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# or less if such range needs to be clipped to the doable one
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#
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# As an example start_z= 10, end_z = 20
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# for reconstructing 10 slices close to scan start.
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# NOTE: we are proceeding in the direction of the scan so that, in millimiters,
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# the start may be above or below the end
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# To reconstruct the whole doable volume set
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#
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#
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# ** option 2) using start_z_mm, end_z_mm
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# Use positive floats, in millimiters. They indicate the height above the sample stage
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# The values of start_z and end_z are not used in this case
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help_start_end_z = """ If start_z_mm , end_z_mm are seto to zero, then start_z and end_z will be effective unless end_z_fract is different from zero. In this latter case the vertical range will be given in terms o the fractional position between the first doable and last doable slices.
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Otherwhise, if start_z_mm and end_z_mm are not zero, the slices whose height above the sample stage, in millimiters, between start_z_mm and end_z_mm are reconstructed
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"""
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# we need to deepcopy this in order not to mess the original nabu_config of the full-field pipeline
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nabu_config = copy.deepcopy(nabu_config)
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nabu_config["preproc"]["processes_file"] = {
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"default": "",
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"help": "Path tgo the file where some operations should be stored for later use. By default it is 'xxx_nabu_processes.h5'",
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"validator": optional_file_location_validator,
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"type": "required",
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}
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nabu_config["preproc"]["double_flatfield_enabled"]["default"] = 1
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{
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"dz_per_proj": {
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"default": 0,
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"help": " A positive DZPERPROJ means that the rotation axis is going up. Alternatively the vertical translations, can be given through an array using the variable z_per_proj_file",
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},
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"z_per_proj_file": {
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"default": "",
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"help": "Alternative to dz_per_proj. A file where each line has one value: vertical displacements of the axis. There should be as many values as there are projection images.",
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"help": " A positive value means that the rotation axis is going on the rigth. Alternatively the horizontal translations, can be given through an array using the variable x_per_proj_file",
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"default": "",
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"help": "Alternative to dx_per_proj. A file where each line has one value: horizontal displacements of the axis. There should be as many values as there are projection images.",
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"help": "Whether to shift start_x and start_y so to have the axis at the center",
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"auto_size": {
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"help": "Wether to set automatically start_x end_x start_y end_y ",
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"help": "Wether to use hbp routine instead of the backprojector from fbp ",
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"validator": boolean_validator,
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"type": "optional",
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},
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"fan_source_distance_meters": {
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"default": 1.0e9,
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94
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"help": "For HBP, for the description of the fan geometry, the source to axis distance. Defaults to a large value which implies parallel geometry",
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95
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"validator": float_validator,
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96
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"type": "optional",
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},
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98
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"start_z_mm": {
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"default": "0",
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"help": help_start_end_z,
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"validator": float_validator,
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"type": "optional",
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},
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"end_z_mm": {
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"default": "0",
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"help": " To determine the reconstructed vertical range: the height in millimiters above the stage below which slices are reconstructed ",
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"validator": float_validator,
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108
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"type": "optional",
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},
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"start_z_fract": {
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"default": "0",
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|
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"help": help_start_end_z,
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|
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"validator": float_validator,
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114
|
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"type": "optional",
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115
|
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},
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116
|
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"end_z_fract": {
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117
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"default": "0",
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118
|
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"help": " To determine the reconstructed vertical range: the height in fractional position between first doable slice and last doable slice above the stage below which slices are reconstructed ",
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"validator": float_validator,
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"type": "optional",
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},
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"start_z": {
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"default": "0",
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"help": "the first slice of the reconstructed range. Numbered going in the direction of the scan and starting with number zero for the first doable slice",
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"validator": slice_num_validator,
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"type": "optional",
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|
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},
|
128
|
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"end_z": {
|
129
|
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"default": "-1",
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130
|
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"help": "the "
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131
|
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"end"
|
132
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" slice of the reconstructed range. Numbered going in the direction of the scan and starting with number zero for the first doable slice",
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133
|
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"validator": slice_num_validator,
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134
|
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"type": "optional",
|
135
|
-
},
|
136
|
-
}
|
137
|
-
)
|
138
|
-
nabu_config["pipeline"].update(
|
139
|
-
{
|
140
|
-
"skip_after_flatfield_dump": {
|
141
|
-
"default": "0",
|
142
|
-
"help": "When the writing of the flatfielded data is activated, if this option is set, then the phase and reconstruction steps are skipped",
|
143
|
-
"validator": boolean_validator,
|
144
|
-
"type": "optional",
|
145
|
-
},
|
146
|
-
}
|
147
|
-
)
|
148
|
-
nabu_config["reconstruction"].update(
|
149
|
-
{
|
150
|
-
"angular_tolerance_steps": {
|
151
|
-
"default": "3.0",
|
152
|
-
"help": "the angular tolerance, an angular width expressed in units of an angular step, which is tolerated in the criteria for deciding if a slice is reconstructable or not",
|
153
|
-
"validator": float_validator,
|
154
|
-
"type": "advanced",
|
155
|
-
},
|
156
|
-
"redundancy_angle_deg": {
|
157
|
-
"default": "0",
|
158
|
-
"help": "Can be 0,180 or 360. If there are dead detector regions (notably scintillator junction (stripes) which need to be complemented at +-360 for local tomo or +- 180 for conventional tomo. This may have an impact on the doable vertical span (you can check it with the --dry-run 1 option)",
|
159
|
-
"validator": float_validator,
|
160
|
-
"type": "advanced",
|
161
|
-
},
|
162
|
-
"enable_halftomo": {
|
163
|
-
"default": "0",
|
164
|
-
"help": "nabu-helical applies the same treatment for half-tomo as for full-tomo. Always let this key to zero",
|
165
|
-
"validator": boolean_validator,
|
166
|
-
"type": "advanced",
|
167
|
-
},
|
168
|
-
"helical_halftomo": {
|
169
|
-
"default": "1",
|
170
|
-
"help": "Wether to consider doable slices those which are contributed by an angular span greater or equal to 360, instead of just 180 or more",
|
171
|
-
"validator": boolean_validator,
|
172
|
-
"type": "advanced",
|
173
|
-
},
|
174
|
-
}
|
175
|
-
)
|
@@ -1,62 +0,0 @@
|
|
1
|
-
from .nabu_config import nabu_config, renamed_keys
|
2
|
-
from .dataset_validator import HelicalDatasetValidator
|
3
|
-
from ..fullfield import processconfig as ff_processconfig
|
4
|
-
from ...resources import dataset_analyzer
|
5
|
-
|
6
|
-
|
7
|
-
class ProcessConfig(ff_processconfig.ProcessConfig):
|
8
|
-
default_nabu_config = nabu_config
|
9
|
-
config_renamed_keys = renamed_keys
|
10
|
-
_use_horizontal_translations = False
|
11
|
-
|
12
|
-
def _configure_save_steps(self):
|
13
|
-
self._dump_sinogram = False
|
14
|
-
steps_to_save = self.nabu_config["pipeline"]["save_steps"]
|
15
|
-
if steps_to_save in (None, ""):
|
16
|
-
self.steps_to_save = []
|
17
|
-
return
|
18
|
-
steps_to_save = [s.strip() for s in steps_to_save.split(",")]
|
19
|
-
for step in self.processing_steps:
|
20
|
-
step = step.strip()
|
21
|
-
if step in steps_to_save:
|
22
|
-
self.processing_options[step]["save"] = True
|
23
|
-
self.processing_options[step]["save_steps_file"] = self.get_save_steps_file(step_name=step)
|
24
|
-
# "sinogram" is a special keyword, not explicitly in the processing steps
|
25
|
-
if "sinogram" in steps_to_save:
|
26
|
-
self._dump_sinogram = True
|
27
|
-
self._dump_sinogram_file = self.get_save_steps_file(step_name="sinogram")
|
28
|
-
self.steps_to_save = steps_to_save
|
29
|
-
|
30
|
-
def _update_dataset_info_with_user_config(self):
|
31
|
-
super()._update_dataset_info_with_user_config()
|
32
|
-
|
33
|
-
self._get_translation_file("reconstruction", "z_per_proj_file", "z_per_proj", last_dim=1)
|
34
|
-
self._get_translation_file("reconstruction", "x_per_proj_file", "x_per_proj", last_dim=1)
|
35
|
-
|
36
|
-
def _get_user_sino_normalization(self):
|
37
|
-
"""is called by the base class but it is not used in helical"""
|
38
|
-
pass
|
39
|
-
|
40
|
-
def _coupled_validation(self):
|
41
|
-
self.logger.debug("Doing coupled validation")
|
42
|
-
self._dataset_validator = HelicalDatasetValidator(self.nabu_config, self.dataset_info)
|
43
|
-
for what in ["rec_params", "rec_region", "binning", "subsampling_factor"]:
|
44
|
-
setattr(self, what, getattr(self._dataset_validator, what))
|
45
|
-
print(what, self._dataset_validator)
|
46
|
-
|
47
|
-
def _browse_dataset(self, dataset_info):
|
48
|
-
"""
|
49
|
-
Browse a dataset and builds a data structure with the relevant information.
|
50
|
-
"""
|
51
|
-
self.logger.debug("Browsing dataset")
|
52
|
-
if dataset_info is not None:
|
53
|
-
self.dataset_info = dataset_info
|
54
|
-
else:
|
55
|
-
self.dataset_info = dataset_analyzer.analyze_dataset(
|
56
|
-
self.nabu_config["dataset"]["location"],
|
57
|
-
extra_options={
|
58
|
-
"exclude_projections": self.nabu_config["dataset"]["exclude_projections"],
|
59
|
-
"hdf5_entry": self.nabu_config["dataset"]["hdf5_entry"],
|
60
|
-
},
|
61
|
-
logger=self.logger,
|
62
|
-
)
|