multipers 2.4.0b1__cp312-cp312-macosx_11_0_arm64.whl

multipers/mma_structures.pxd

@@ -0,0 +1,134 @@
+from libcpp.utility cimport pair
+from libcpp cimport bool
+from libcpp.vector cimport vector
+from libc.stdint cimport uintptr_t,intptr_t
+
+
+
+from multipers.filtrations cimport *
+ctypedef vector[unsigned int] boundary_type
+ctypedef vector[boundary_type] boundary_matrix
+ctypedef vector[int] simplex_type
+
+cdef extern from "multiparameter_module_approximation/approximation.h" namespace "Gudhi::multiparameter::mma":
+    cdef cppclass Summand[T=*]:
+        ctypedef vector[T] corner_type
+        ctypedef T value_type
+
+        ctypedef pair[vector[T],vector[T]] interval
+        Summand() except +
+        Summand(int) except +
+        Summand(vector[T]&, vector[T]&, int, int)  except + nogil
+        T get_interleaving() nogil
+        T get_local_weight(const vector[T]&, const T)  nogil
+        void add_bar(T, T, const vector[T]&, vector[T]&, vector[T]&, const bool, const interval&) nogil
+        vector[One_critical_filtration[T]] get_birth_list() nogil
+        vector[One_critical_filtration[T]] get_death_list() nogil
+        void complete_birth(const T)  nogil
+        void complete_death(const T)  nogil
+        int get_dimension()  nogil const 
+        void set_dimension(int) nogil
+        bool contains(const vector[T]&)  nogil const
+        Box[T] get_bounds() nogil const
+        void rescale(const vector[T]&) nogil
+        bool operator==(const Summand[T]&) nogil
+
+
+
+
+cdef extern from "multiparameter_module_approximation/utilities.h" namespace "Gudhi::multiparameter::mma":
+    cdef cppclass MultiDiagram_point[T=*]:
+        ctypedef T value_type
+        ctypedef One_critical_filtration[double] filtration_type
+        MultiDiagram_point()   except + nogil
+        MultiDiagram_point(int , T , T )   except + nogil
+        const T& get_birth()    nogil const
+        const T& get_death()  nogil const 
+        int get_dimension() nogil  const 
+
+cdef extern from "multiparameter_module_approximation/utilities.h" namespace "Gudhi::multiparameter::mma":
+    cdef cppclass MultiDiagram[T=*, value_type=*]:
+        MultiDiagram()   except + nogil
+        ctypedef pair[vector[T], vector[T]] bar
+        ctypedef vector[bar] barcode
+        ctypedef vector[float] multipers_bar
+        ctypedef vector[multipers_bar] multipers_barcode
+
+        vector[pair[vector[value_type],vector[value_type]]] get_points(const int) const  
+        vector[vector[double]] to_multipers(const int) nogil const   
+        vector[MultiDiagram_point[T]].const_iterator begin()  
+        vector[MultiDiagram_point[T]].const_iterator end()  
+        unsigned int size() const  
+        MultiDiagram_point[T]& at(unsigned int)  nogil
+
+cdef extern from "multiparameter_module_approximation/utilities.h" namespace "Gudhi::multiparameter::mma":
+    cdef cppclass MultiDiagrams[T=*, value_type=*]:
+        MultiDiagrams()  except + nogil
+        ctypedef pair[vector[pair[double, double]], vector[unsigned int]] plot_interface_type
+        ctypedef vector[T] corner_type
+        ctypedef pair[corner_type, corner_type] bar
+        ctypedef vector[bar] barcode
+        ctypedef vector[T] multipers_bar
+        ctypedef vector[multipers_bar] multipers_barcode
+        ctypedef vector[barcode] barcodes
+        vector[vector[vector[double]]] to_multipers() nogil const    
+        MultiDiagram[T, value_type]& at(const unsigned int)  nogil
+        unsigned int size() nogil const  
+        vector[MultiDiagram[T, value_type]].const_iterator begin()
+        vector[MultiDiagram[T, value_type]].const_iterator end()
+        plot_interface_type _for_python_plot(int, double)  nogil
+        vector[vector[pair[vector[value_type], vector[value_type]]]] get_points()  nogil
+
+cdef extern from "multiparameter_module_approximation/approximation.h" namespace "Gudhi::multiparameter::mma":
+    cdef cppclass Module[T=*]:
+        ctypedef vector[vector[T]] image_type
+        Module()  except + nogil
+        Module(const vector[intptr_t]&)
+        void resize(unsigned int, int)  nogil
+        Summand[T]& at(unsigned int)  nogil
+        vector[Summand[T]].iterator begin()
+        vector[Summand[T]].iterator end() 
+        bool operator==(const Module[T]&) nogil
+        void clean(const bool)  nogil
+        void fill(const T)  nogil
+        # vector[image_type] get_vectorization(const T,const T, unsigned int,unsigned int,const Box&)
+        # image_type get_vectorization_in_dimension(const int,const T,unsigned int,unsigned int,const Box&)
+        void add_summand(Summand[T])  nogil
+        void add_summand(Summand[T], int)  nogil
+        unsigned int size() const  
+        Box[T] get_box() const  
+        Box[T] get_bounds() nogil const
+        void set_box(Box[T])  nogil
+        int get_dimension() const 
+        vector[pair[vector[vector[T]], vector[vector[T]]]] get_corners_of_dimension(unsigned int)  nogil
+        image_type get_vectorization_in_dimension(const int, const T, const T, const bool, Box[T]&, unsigned int, unsigned int)  nogil
+        vector[image_type] get_vectorization(const T, const T, const bool, Box[T], unsigned int, unsigned int)  nogil
+        MultiDiagram[One_critical_filtration[T], T] get_barcode(Line[T]&, const int, const bool)  nogil
+        vector[vector[pair[T,T]]] get_barcode2(Line[T]&, const int)  nogil
+        MultiDiagrams[One_critical_filtration[T],T] get_barcodes(const vector[Point[T]]& , const int, const bool )  nogil
+        vector[vector[vector[pair[T,T]]]] get_barcodes2(const vector[Line[T]]& , const int, )  nogil
+        image_type get_landscape(const int,const unsigned int,Box[T],const vector[unsigned int]&)  nogil
+        vector[image_type] get_landscapes(const int,const vector[unsigned int],Box[T],const vector[unsigned int]&)  nogil
+        vector[int] euler_curve(const vector[One_critical_filtration[T]]&) nogil
+        void rescale(vector[T]&, int) nogil
+        void translate(vector[T]&, int) nogil
+        vector[vector[T]] compute_pixels(vector[vector[T]], vector[int], Box[T], T, T, bool,int) nogil
+        vector[vector[pair[vector[vector[int]],vector[vector[int]]]]] to_idx(vector[vector[T]]) nogil
+        vector[vector[vector[int]]] to_flat_idx(vector[vector[T]]) nogil
+        vector[vector[vector[int]]] compute_distances_idx_to(vector[vector[T]],bool, int) nogil
+        vector[vector[T]] compute_distances_to(vector[vector[T]],bool, int) nogil
+        vector[T] get_interleavings(Box[T]) nogil
+        vector[int] get_degree_splits() nogil
+        void compute_distances_to(T*,vector[vector[T]],bool, int) nogil
+        void add_modules_from_ptr(const vector[intptr_t]& modules)
+        Module[T] permute_summands(const vector[int]&) nogil
+        void snap_to_integers() nogil
+        void evaluate_in_grid(const vector[vector[T]]&) except + nogil
+
+    Module[T] direct_sum[T](const Module[T]&, const Module[T]&) noexcept nogil
+
+
+
+
+cdef inline list[tuple[list[double],list[double]]] _bc2py(vector[pair[vector[double],vector[double]]] bc):
+    return bc