bioregistry 0.13.16__py3-none-any.whl → 0.13.18__py3-none-any.whl

bioregistry/data/curated_papers.tsv

@@ -1,6 +1,7 @@
 pubmed	relevant	orcid	date_curated	relevancy_type	pr_added	notes
 30380085	1	0009-0009-3402-8013	2025-10-07	new_prefix	1714	Publication for dbamp
 31836719	1	0009-0009-3402-8013	2025-10-09	new_prefix	1724	Publication for nfportal.tool
+33685493	1	0009-0009-3402-8013	2025-12-24	new_prefix	1798	Publication for ribocirc
 34850155	1	0009-0009-3402-8013	2025-10-07	new_publication	1714	Publication for dbamp 2.0
 38530613	1	0009-0009-3402-8013	2025-10-30	new_provider	1730	Publication for dotad
 38991828	0	0009-0009-5240-7463	2024-09-28	irrelevant_other	1193	
@@ -364,3 +365,4 @@ pubmed	relevant	orcid	date_curated	relevancy_type	pr_added	notes
 40842115	1	0009-0009-3402-8013	2025-11-25	new_prefix	1771	Publication for molgluedb
 41087926	1	0009-0009-3402-8013	2025-12-21	new_prefix	1796	Publication for pahg
 41099621	1	0009-0009-3402-8013	2025-12-26	new_prefix	1799	Publication for pmads
+41118507	1	0009-0009-3402-8013	2025-12-24	new_prefix	1798	Publication for ribocirc v2.0

bioregistry/external/aberowl/processed.json

@@ -142,7 +142,7 @@
   },
   "AEO": {
     "description": "AEO is an ontology of anatomical structures that expands CARO, the Common Anatomy Reference Ontology",
-    "download_owl": "http://aber-owl.net/media/ontologies/AEO/8/aeo.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/AEO/9/aeo.owl",
     "homepage": "https://github.com/obophenotype/human-developmental-anatomy-ontology/",
     "name": "Anatomical Entity Ontology",
     "prefix": "AEO"
@@ -1386,7 +1386,7 @@
   },
   "CHEBI": {
     "description": "A structured classification of molecular entities of biological interest focusing on 'small' chemical compounds.",
-    "download_owl": "http://aber-owl.net/media/ontologies/CHEBI/209/chebi.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/CHEBI/210/chebi.owl",
     "homepage": "http://www.ebi.ac.uk/chebi",
     "name": "Chemical Entities of Biological Interest",
     "prefix": "CHEBI"
@@ -1573,6 +1573,13 @@
     "prefix": "CMECS",
     "version": "1.1.0"
   },
+  "CMEO": {
+    "description": "CMEO (Clinical Metadata Exploration Ontology) is an ontology for representing and querying study- and variable-level metadata from clinical cohort studies in a consistent, machine-interpretable way. CMEO models the semantics of data elements (variables) and their key metadata needed for cross-cohort discovery and harmonization—such as human-readable labels/definitions, domain/type information (e.g., condition, measurement, medication), permissible categorical values, units, visit/timepoint context, derivation/provenance (e.g., computed variables), and basic descriptive statistics. It is designed to support metadata-driven tasks including cohort cataloguing, feasibility assessment, study retrieval, and identification of compatible variables across studies—without requiring access to patient-level data. It is intended to interoperate with controlled vocabularies and common clinical terminologies by linking data elements and value sets to external concept identifiers (e.g., OMOP concept IDs, SNOMED CT, LOINC, RxNorm/ATC, UCUM) while remaining model-agnostic (i.e., not tied to a single CDM). , and identification of compatible variables across studies—without requiring access to patient-level data. CMEO is intended to interoperate with controlled vocabularies and common clinical terminologies by linking data elements and value sets to external concept identifiers (e.g., not tied to a single CDM).",
+    "download_owl": "http://aber-owl.net/media/ontologies/CMEO/1/cmeo.owl",
+    "name": "Clinical Metadata Exploration Ontology",
+    "prefix": "CMEO",
+    "version": "version 2"
+  },
   "CMF": {
     "name": "CranioMaxilloFacial ontology",
     "prefix": "CMF"
@@ -2533,7 +2540,7 @@
   },
   "ECO": {
     "description": "An ontology for experimental and other evidence statements.",
-    "download_owl": "http://aber-owl.net/media/ontologies/ECO/115/eco.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/ECO/116/eco.owl",
     "homepage": "https://www.evidenceontology.org",
     "name": "Evidence and Conclusion Ontology",
     "prefix": "ECO"
@@ -2673,8 +2680,8 @@
   },
   "EHDAA2": {
     "description": "A structured controlled vocabulary of stage-specific anatomical structures of the developing human.",
-    "download_owl": "http://aber-owl.net/media/ontologies/EHDAA2/33/ehdaa2.owl",
-    "homepage": "http://genex.hgu.mrc.ac.uk/",
+    "download_owl": "http://aber-owl.net/media/ontologies/EHDAA2/34/ehdaa2.owl",
+    "homepage": "https://github.com/obophenotype/human-developmental-anatomy-ontology",
     "name": "Human developmental anatomy, abstract",
     "prefix": "EHDAA2"
   },
@@ -2707,7 +2714,7 @@
   },
   "EMAPA": {
     "description": "An ontology for mouse anatomy covering embryonic development and postnatal stages.",
-    "download_owl": "http://aber-owl.net/media/ontologies/EMAPA/24/emapa.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/EMAPA/25/emapa.owl",
     "homepage": "http://www.informatics.jax.org/expression.shtml",
     "name": "Mouse Developmental Anatomy Ontology",
     "prefix": "EMAPA"
@@ -3337,7 +3344,7 @@
   },
   "FOODON": {
     "description": "A broadly scoped ontology representing entities which bear a “food role”. It encompasses materials in natural ecosystems and agriculture that are consumed by humans and domesticated animals. This includes any generic (unbranded) raw or processed food material found in processing plants, markets, stores or food distribution points. FoodOn also imports nutritional component and dietary pattern terms from other OBO Foundry ontologies to support interoperability in diet and nutrition research",
-    "download_owl": "http://aber-owl.net/media/ontologies/FOODON/90/foodon.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/FOODON/91/foodon.owl",
     "homepage": "https://foodon.org/",
     "name": "Food Ontology",
     "prefix": "FOODON"
@@ -4255,7 +4262,7 @@
   },
   "HP": {
     "description": "The Human Phenotype Ontology (HPO) is a structured and controlled vocabulary for the phenotypic features encountered in human hereditary and other disease.",
-    "download_owl": "http://aber-owl.net/media/ontologies/HP/622/hp.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/HP/623/hp.owl",
     "homepage": "http://www.human-phenotype-ontology.org/",
     "name": "Human Phenotype Ontology (HPO)",
     "prefix": "HP"
@@ -5505,7 +5512,7 @@
   },
   "MA": {
     "description": "A structured controlled vocabulary of the adult anatomy of the mouse (Mus).",
-    "download_owl": "http://aber-owl.net/media/ontologies/MA/127/ma.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/MA/128/ma.owl",
     "homepage": "https://github.com/obophenotype/mouse-anatomy-ontology",
     "name": "Mouse adult gross anatomy",
     "prefix": "MA"
@@ -6054,7 +6061,7 @@
   },
   "MMO": {
     "description": "A representation of the variety of methods used to make clinical and phenotype measurements.",
-    "download_owl": "http://aber-owl.net/media/ontologies/MMO/119/mmo.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/MMO/120/mmo.owl",
     "homepage": "https://rgd.mcw.edu/rgdweb/ontology/view.html?acc_id=MMO:0000000",
     "name": "Measurement method ontology",
     "prefix": "MMO"
@@ -6124,7 +6131,7 @@
   },
   "MONDO": {
     "description": "A global community effort to harmonize multiple disease resources to yield a coherent merged ontology.",
-    "download_owl": "http://aber-owl.net/media/ontologies/MONDO/108/mondo.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/MONDO/109/mondo.owl",
     "homepage": "https://monarch-initiative.github.io/mondo",
     "name": "Mondo Disease Ontology",
     "prefix": "MONDO"
@@ -6212,7 +6219,7 @@
   },
   "MS": {
     "description": "A structured controlled vocabulary for the annotation of experiments concerned with proteomics mass spectrometry.",
-    "download_owl": "http://aber-owl.net/media/ontologies/MS/228/ms.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/MS/229/ms.owl",
     "homepage": "http://www.psidev.info/groups/controlled-vocabularies",
     "name": "Mass spectrometry ontology",
     "prefix": "MS"
@@ -6924,7 +6931,7 @@
   },
   "OBI": {
     "description": "An integrated ontology for the description of life-science and clinical investigations",
-    "download_owl": "http://aber-owl.net/media/ontologies/OBI/62/obi.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/OBI/63/obi.owl",
     "homepage": "http://obi-ontology.org",
     "name": "Ontology for Biomedical Investigations",
     "prefix": "OBI"
@@ -7245,7 +7252,7 @@
   },
   "OHMI": {
     "description": "The Ontology of Host-Microbiome Interactions aims to ontologically represent and standardize various entities and relations related to microbiomes, microbiome host organisms (e.g., human and mouse), and the interactions between the hosts and microbiomes at different conditions.",
-    "download_owl": "http://aber-owl.net/media/ontologies/OHMI/16/ohmi.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/OHMI/17/ohmi.owl",
     "homepage": "https://github.com/ohmi-ontology/ohmi",
     "name": "Ontology of Host-Microbiome Interactions",
     "prefix": "OHMI"
@@ -7344,7 +7351,7 @@
   },
   "OMRSE": {
     "description": "The Ontology for Modeling and Representation of Social Entities (OMRSE) is an OBO Foundry ontology that represents the various entities that arise from human social interactions, such as social acts, social roles, social groups, and organizations.",
-    "download_owl": "http://aber-owl.net/media/ontologies/OMRSE/63/omrse.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/OMRSE/64/omrse.owl",
     "homepage": "https://github.com/mcwdsi/OMRSE/wiki/OMRSE-Overview",
     "name": "Ontology for Modeling and Representation of Social Entities",
     "prefix": "OMRSE"
@@ -7832,6 +7839,10 @@
     "prefix": "ORTH",
     "version": "2015-11-27"
   },
+  "OSDI": {
+    "name": "Ontology for the Simulation of Diseases",
+    "prefix": "OSDI"
+  },
   "OSM": {
     "description": "Esta ontologia foi desenvolvida para auxiliar na gestão da Rede de Atenção Psicossocial no contexto brasileiro, a fim de possibilitar a criação de ferramentas computacionais inteligentes, permitindo a integração e interoperabilidade entre bases de dados independentes e possibilitando a geração de indicadores para a saúde mental, visando melhorar a tomada de decisão, o planejamento e a eficiência e eficácia dos serviços prestados à comunidade.",
     "download_owl": "http://aber-owl.net/media/ontologies/OSM/1/osm.owl",
@@ -8427,6 +8438,13 @@
     "name": "taimoor Ontology",
     "prefix": "PRE-CLINICAL"
   },
+  "PREFER": {
+    "description": "PREFER is an ontology designed to integrate high-throughput bioprocess data, covering operational, environmental and process parameters across different scales of a precision fermentation process, to accelerate the development and scaling of biosustainable production processes., An ontology for PREcision FERmentation.",
+    "download_owl": "http://aber-owl.net/media/ontologies/PREFER/1/prefer.owl",
+    "name": "Precision Fermentation Ontology",
+    "prefix": "PREFER",
+    "version": "2025-12-22"
+  },
   "PREGONTO": {
     "description": "The pregnancy ontology is a biomedical ontology used for identifying pregnancies in routine health databases. The ontology was primarily developed for conducting surveillance of vaccine uptake in pregnant women in the UK.",
     "download_owl": "http://aber-owl.net/media/ontologies/PREGONTO/1/pregonto.owl",
@@ -8522,7 +8540,7 @@
   },
   "PSO": {
     "description": "The Plant Stress Ontology describes biotic and abiotic stresses that a plant may encounter.",
-    "download_owl": "http://aber-owl.net/media/ontologies/PSO/6/pso.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/PSO/7/pso.owl",
     "homepage": "https://github.com/Planteome/plant-stress-ontology",
     "name": "Plant Stress Ontology",
     "prefix": "PSO"
@@ -8962,7 +8980,7 @@
   },
   "RS": {
     "description": "Ontology of rat strains",
-    "download_owl": "http://aber-owl.net/media/ontologies/RS/203/rs.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/RS/204/rs.owl",
     "homepage": "http://rgd.mcw.edu/rgdweb/search/strains.html",
     "name": "Rat Strain Ontology",
     "prefix": "RS"
@@ -10246,7 +10264,7 @@
   },
   "UO": {
     "description": "Metrical units for use in conjunction with PATO",
-    "download_owl": "http://aber-owl.net/media/ontologies/UO/61/uo.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/UO/62/uo.owl",
     "homepage": "https://github.com/bio-ontology-research-group/unit-ontology",
     "name": "Units of measurement ontology",
     "prefix": "UO"
@@ -10327,10 +10345,10 @@
   },
   "VFB_DRIVERS": {
     "description": "An ontology of Drosophila melanogaster drivers and expression patterns., An ontology of Drosophila melanogaster drivers and expression patterns. All genetic objects are created using data taken directly from FlyBase.",
-    "download_owl": "http://aber-owl.net/media/ontologies/VFB_DRIVERS/198/vfb_drivers.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/VFB_DRIVERS/199/vfb_drivers.owl",
     "name": "vfb_drivers",
     "prefix": "VFB_DRIVERS",
-    "version": "2025-12-29"
+    "version": "2026-01-05"
   },
   "VHO": {
     "description": "Ontology of terms used for annotating data in Virtual Fly Brain, including anatomical templates.",
@@ -10540,7 +10558,7 @@
   },
   "VT": {
     "description": "An ontology of traits covering vertebrates",
-    "download_owl": "http://aber-owl.net/media/ontologies/VT/141/vt.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/VT/142/vt.owl",
     "homepage": "https://github.com/AnimalGenome/vertebrate-trait-ontology",
     "name": "Vertebrate trait ontology",
     "prefix": "VT"
@@ -10708,7 +10726,7 @@
   },
   "XCO": {
     "description": "Conditions under which physiological and morphological measurements are made both in the clinic and in studies involving humans or model organisms.",
-    "download_owl": "http://aber-owl.net/media/ontologies/XCO/154/xco.owl",
+    "download_owl": "http://aber-owl.net/media/ontologies/XCO/155/xco.owl",
     "homepage": "https://rgd.mcw.edu/rgdweb/ontology/view.html?acc_id=XCO:0000000",
     "name": "Experimental condition ontology",
     "prefix": "XCO"

bioregistry/external/bartoc/processed.json

@@ -2508,9 +2508,10 @@
   "1376": {
     "description": "The iDAI.Gazetteer is a webservice that connects place names with coordinates and works in two directions. Inside, it serves as a standard datavocabular for all DAI's location-specific information and information systems. To the outside he should connect these with the global Gazetteer systems.",
     "homepage": "http://gazetteer.dainst.org/app/",
-    "license": "CC-BY-3.0",
-    "name": "iDAI.gazetteer Thesaurus",
-    "prefix": "1376"
+    "license": "CC-BY-4.0",
+    "name": "iDAI.gazetteer",
+    "prefix": "1376",
+    "wikidata_database": "Q93290690 "
   },
   "1377": {
     "description": "The document classification code is a working tool used to classify any document produced or received by an organ in the exercise of its functions and activities. Subject classification is used for the purpose of grouping the documents under The same theme, as a way to expedite its recovery and to facilitate the archival tasks related to the evaluation, selection, elimination, transfer, recollection and access to these documents, since the archival work is carried out based on the content of the document, which The classification defines, therefore, the physical organization of the archived documents, constituting a basic reference for its recovery. In the classification code, the functions, activities, species and Document types generally referred to as subjects, are hierarchically According to the functions and activities performed by the body. In other words, the sums are given numeric codes, which reflect the functional hierarchy of the organ, defined through classes, subclasses, groups and subgroups, always starting from the general to the particular. For this instrument the model of decimal classification code was adopted. As the name implies, the decimal system of classification by subjects constitutes a numerical code divided in ten classes and these in turn in ten subclasses and so on.",
@@ -4568,7 +4569,7 @@
   "1674": {
     "description": "The GeoNames geographical database is available for download free of charge under a creative commons attribution license. It contains over 10 million geographical names and consists of over 9 million unique features whereof 2.8 million populated places and 5.5 million alternate names. All features are categorized into one out of nine feature classes and further subcategorized into one out of 645 feature codes. (...) The data is accessible free of charge through a number of webservices and a daily database export. GeoNames is already serving up to over 150 million web service requests per day.\n\nGeoNames is integrating geographical data such as names of places in various languages, elevation, population and others from various sources. All lat/long coordinates are in WGS84 (World Geodetic System 1984). Users may manually edit, correct and add new names using a user friendly wiki interface. GeoNames has Ambassadors in many countries who assist with their help and expertise.",
     "homepage": "http://www.geonames.org/",
-    "license": "CC-BY-3.0",
+    "license": "CC-BY-4.0",
     "name": "GeoNames",
     "prefix": "1674",
     "wikidata_database": "Q830106"
@@ -15277,7 +15278,8 @@
   },
   "20300": {
     "description": "Olympic games glossary (English, Greek, French)",
-    "homepage": "http://repository.academyofathens.gr/document/201864.pdf",
+    "homepage": "https://repository.academyofathens.gr/keeon/content/40",
+    "name": "Olympic games glossary",
     "prefix": "20300"
   },
   "20301": {
@@ -15439,6 +15441,7 @@
   "20323": {
     "description": "This list relates to the MIDAS unit Management Proposal Type. The different contexts of consultations can be recorded, which in turn may determine the appropriate nature, method, procedure to be adopted by the inventory in response to the consultation (e.g. planning application, listed building consent, conservation area appraisal).",
     "homepage": "http://www.heritage-standards.org.uk/fish-vocabularies/",
+    "name": "Consultation Type",
     "prefix": "20323"
   },
   "20324": {
@@ -15450,6 +15453,7 @@
   "20325": {
     "description": "This list relates to the MIDAS unit Management Proposal Outcome. It is intended to provide the option to audit the effectiveness of archaeological recommendations made in response to proposed work or planning applications by recording the final result of the planning application (e.g. approved with full condition, refused, amended).",
     "homepage": "http://www.heritage-standards.org.uk/fish-vocabularies/",
+    "name": "Final Outcome List",
     "prefix": "20325"
   },
   "20326": {
@@ -15590,7 +15594,6 @@
     "prefix": "20346"
   },
   "20347": {
-    "homepage": "http://uri.gbv.de/terminology/bilddatenbank_typ_art/",
     "name": "Type (bilddatenbank.gbv.de)",
     "prefix": "20347"
   },
@@ -16322,16 +16325,18 @@
     "prefix": "20454"
   },
   "20455": {
+    "description": "Artificial Intelligence is a field of computer science concerned with the design of intelligent computational systems, that is, systems that exhibit characteristics associated with intelligence in human behavior.\n\nThe book covers Artificial Intelligence throughout its entire historical development, beginning with approaches based on the systematic recording and codification of human intelligence. It describes problem modeling, methods of knowledge representation, and algorithms for searching for their solutions. It then delves into areas such as knowledge-based systems, constraint solving, action planning, machine learning, genetic algorithms, fuzzy logic, and neural networks. Finally, it also extends to more complex applications, such as intelligent agents and the semantic web.\n\nThe primary aim of the book was to serve as a textbook for teaching a course in Artificial Intelligence. Since its first edition (2002), the book has indeed been widely accepted by almost all university-level departments of computer science, a trend that continued in the following two editions.",
     "homepage": "https://aibook.gr/glossary-en/",
     "name": "Artificial intelligence glossary",
     "prefix": "20455"
   },
   "20456": {
     "homepage": "https://aibook.gr/glossary-en/",
-    "name": "Artificial intelligence glossary",
+    "name": "Artificial intelligence glossary - Duplicate from https://bartoc.org/en/node/20455",
     "prefix": "20456"
   },
   "20457": {
+    "description": "The glossary of the Conference of Ministers responsible for Spatial/Regional Planning of the Council of Europe (CEMAT), containing the basic terms used in European spatial development policies, formed part of the Work Programme of the Committee of Senior Officials and was presented at the 14th Session of the Conference of Ministers responsible for Spatial/Regional Planning in Lisbon (Portugal), on 26–27 October 2006, under the theme “Networks for the Sustainable Spatial Development of the European Continent: Bridges across Europe.”\n\nIt is addressed to senior officials, professionals, and representatives of civil society who are involved in spatial planning policies and related activities. The glossary was prepared by the Committee of Senior Officials of the CEMAT Conference of Ministers responsible for Spatial/Regional Planning, with the assistance of Mr Jacques Robert, Expert of the Council of Europe, within the framework of the work carried out by the Spatial Planning and Landscape Division of the Directorate of Culture and Cultural and Natural Heritage.",
     "homepage": "https://rm.coe.int/16806f7d5b",
     "name": "Spatial development glossary",
     "prefix": "20457"
@@ -18368,6 +18373,7 @@
     "description": "The LIDO Gender Actor Vocabulary is a controlled list of terms recommended to use as values in the LIDO Gender Actor element, indicating the sex assigned at birth or the gender identity of an actor",
     "homepage": "http://terminology.lido-schema.org/genderActor",
     "license": "CC-BY-4.0",
+    "name": "LIDO Terminology Gender Actor",
     "prefix": "20738"
   },
   "20739": {
@@ -20121,6 +20127,27 @@
     "name": "IVOA DALI Examples",
     "prefix": "21005"
   },
+  "21006": {
+    "description": "vocnet represents an extension of skos-thes, which extends SKOS with elements of the international thesaurus standard ISO 25964-1 (2011).",
+    "homepage": "https://schema.vocnet.org/",
+    "name": "vocnet",
+    "prefix": "21006"
+  },
+  "21007": {
+    "abbreviation": "Plasma-O",
+    "description": "Plasma Ontology, also called Plasma-O, is a domain-specific ontology for low-temperature plasma science and technology. It reuses several classes and properties from other ontologies such as VIVO, BIBO, and FOAF.",
+    "homepage": "https://github.com/plasma-mds/plasma-ontology",
+    "license": "CC-BY-4.0",
+    "name": "Plasma-Ontology",
+    "prefix": "21007"
+  },
+  "21008": {
+    "description": "MathModDB is a database of mathematical models developed by the Mathematical Research Data Initiative (MaRDI). MathModDB defines a data model with classes (Mathematical Model, Mathematical Formulation, Research Field, Research Problem, Quantity [Kind], Computational Task, Publication), object properties/relations, data properties and annotation properties as an ontology. This ontology is populated with individuals/data from various fields of applied mathematics, making it a knowledge graph.",
+    "homepage": "https://portal.mardi4nfdi.de/wiki/MathModDB",
+    "license": "CC-BY-4.0",
+    "name": "MathModDB Ontology and Knowledge Graph for Mathematical Models",
+    "prefix": "21008"
+  },
   "211": {
     "abbreviation": "CABT",
     "description": "The CAB Thesaurus is the essential search tool for all users of the CAB ABSTRACTS™ and Global Health databases and related products. The CAB Thesaurus is not only an invaluable aid for database users but it has many potential uses by individuals and organizations indexing their own information resources for both internal use and on the Internet.\n\nIts strengths include: Controlled vocabulary that has been in constant use since 1983; Regularly updated (current version released July 2017) (...); Broad coverage of pure and applied life sciences, technology and social sciences (...); Total number of terms approaching 2.7 million; Specific terminology for all subjects covered; Includes about 241,900 plant, animal and microorganism names; Broad, narrow and related terms to help users find relevant terminology; Cross-references from non-preferred synonyms to preferred terms; Multi-lingual, with Dutch, Portuguese and Spanish equivalents for most English terms, plus lesser content in Danish, Finnish, French, German, Italian, Norwegian and Swedish; American and British spelling variants; Relevant CAS registry numbers for chemicals; Commission notation for enzymes.",
@@ -21746,10 +21773,11 @@
   },
   "452": {
     "description": "Scope: 62 main groups, with about 9000 items down to the fourth hierarchy level.",
-    "homepage": "https://museumsvokabular.de/node/6",
+    "homepage": "https://museumsvokabular.de/grobsystematik/",
     "license": "CC BY-NC-SA 3.0",
     "name": "General Classification for Museums",
-    "prefix": "452"
+    "prefix": "452",
+    "wikidata_database": "Q126952524"
   },
   "453": {
     "description": "Keywords in this Thesaurus are referred to as preferred terms. Preferred terms are used in indexing the Australian Transport Index (ATRI) and are shown in bold type. Non-preferred terms are not used for indexing and are shown in italics; their role in the Thesaurus is to lead to the preferred term. Terms in the Thesaurus are listed in a single alphabetical sequence and appear in word-by-word order, so that 'Access road' appears before 'Accessibility'. This Thesaurus is designed to assist Australian researchers to access Australian and overseas literature on land transport. However, it may also be useful to those involved in metadata and knowledge management within the land transport arena.",
@@ -21792,7 +21820,6 @@
     "prefix": "458"
   },
   "459": {
-    "abbreviation": "ICONCLASS",
     "description": "Iconclass is a subject-specific classification system. It is a hierarchically ordered collection of definitions of objects, people, events and abstract ideas that serve as the subject of an image. Art historians, researchers and curators use it to describe, classify and examine the subject of images represented in various media such as paintings, drawings and photographs. Numerous institutions across the world use Iconclass to describe and classify their collections in a standardized manner. In turn, users ranging from art historians to museum visitors use Iconclass to search and retrieve images from these collections. And as a research tool, Iconclass is also used to identify the significance of entire scenes or individual elements represented within an image. ICONCLASS applications used around the world have made it the most widely accepted classification system for visual documents. The three main components of Iconclass are: Classification System: 28,000 hierarchically ordered definitions divided into ten main divisions. Each definition consists of an alphanumeric classification code (notation) and the description of the iconographic subject (textual correlate). The definitions are used to index, catalogue and describe the subjects of images represented in works of art, reproductions, photographs and other sources. Alphabetical Index: 14,000 keywords used for locating the notation and its textual correlate needed to describe and/or index an image. Bibliography: 40,000 references to books and articles of iconographical interest (not yet online).",
     "homepage": "https://iconclass.org/",
     "license": "ODBL",
@@ -22019,7 +22046,8 @@
     "homepage": "https://museumsverband-hessen.de/de/veroeffentlichungen/arbeitshilfen-und-handreichungen",
     "license": "CC BY-NC-SA 3.0",
     "name": "Nomenclature for inventorying cultural history collections in museums",
-    "prefix": "489"
+    "prefix": "489",
+    "wikidata_database": "Q126952483"
   },
   "49": {
     "description": "Physical evidence, usually portable, resulting from past human activity or environmental remains that can be recovered from archaeological fieldwork. English Heritage takes a leading role in setting standards for recording the built and buried heritage. By setting standards that can be adopted by everyone, we can make sure that all records are consistent. In other words, if everyone uses the same words to describe the same monument, archaeological object, building material, etc, then anyone using this common language can easily index, retrieve and understand these records. With this aim in mind, English Heritage is continually developing new thesauri to provide structure and guidelines for the standardisation of terms to be used when creating new records of the past. Now, in our drive to disseminate these standards and promote their wider use, we are making available seven separate online thesauri. A tailor-made suite of programs has been developed, which uses a database to create a series of web pages for any chosen thesaurus. These can be easily accessed using a frames-capable browser and regularly updated as new terms are submitted and approved by our Data Standards Unit.\n\nNational cultural heritage thesauri and vocabularies have acted as standards for use by both national organizations and local authority Historic Environment Records but until now have lacked the persistent Linked Open Data (LOD) URIs that would allow them to act as vocabulary hubs for the Web of Data. The AHRC funded SENESCHAL project aims to make such vocabularies available online as Semantic Web resources. SENESCHAL will start with major vocabularies as exemplars and project partners will continue to make other vocabularies available. Other organizations are welcome to make use of the data and services which will be open licensed.\n\nRESTful web services will be developed for the project to make the vocabulary resources programmatically accessible and searchable. These will include the provision to ‘feed back’ new terms (concepts) suggested by users.",
@@ -22036,11 +22064,11 @@
     "wikidata_database": "Q11544935"
   },
   "491": {
-    "description": "A typology for museums and collections: 12 basic shapes of vessels as well as a hierarchy of these types of forms, the forms are represented by extensive drawings and photographs, each of which is presented in alphabetical order with numerous concrete object names Phrases and each illustrated by a photo.",
-    "homepage": "https://museumsvokabular.de/node/6",
-    "license": "CC BY-NC-SA 3.0",
+    "description": "A typology for museums and collections: 12 basic shapes of vessels as well as a hierarchy of these types of forms, the forms are represented by extensive drawings and photographs, each of which is presented in alphabetical order with numerous concrete object names Phrases and each illustrated by a photo. \"\n\nThe vocabulary is available online in multiple instances under different licenses; licensing depends on the respective platform.",
+    "homepage": "https://museumsvokabular.de/gefaesstypologie/",
     "name": "Typology of Vessels",
-    "prefix": "491"
+    "prefix": "491",
+    "wikidata_database": "Q136706277 "
   },
   "492": {
     "description": "The third edition of the Australian and New Zealand Standard Offence Classification (ANZSOC) has been developed for use within Australia and in New Zealand for the production and analysis of crime and justice statistics. It replaces the second edition of the Australian Standard Offence Classification (ASOC) and incorporates a title change from ASOC to ANZSOC and corrects some minor typographical errors only. The classification content and structure, which was updated in the second edition of ASOC following a review of the first edition of ASOC released in 1997, remains unchanged. The revised title ANZSOC reflects the international use of the framework to classify criminal behaviour and highlights the collaborative work occurring between Australia and New Zealand. The title change from ASOC to ANZSOC is also in accordance with the agreed policy between the Australian Bureau of Statistics (ABS) and Statistics New Zealand to harmonise classifications where possible. The objective of the ANZSOC is to provide a uniform national statistical framework for classifying criminal behaviour in the production and analysis of crime and justice statistics. The ANZSOC is used in Australian Bureau of Statistics statistical collections, Statistics New Zealand statistical collections, Australian police, criminal courts and corrective services agencies and New Zealand police and justice agencies.",
@@ -22083,11 +22111,11 @@
     "wikidata_database": "Q243350"
   },
   "497": {
-    "description": "Scope: 4 main groups with subdivision up to the 5th hierarchical level.",
-    "homepage": "https://museumsvokabular.de/node/6",
-    "license": "CC BY-NC-SA 3.0",
+    "description": "Thesaurus on agricultural implements, field cultivation, agricultural transport and utility vehicles, and tools (woodworking). \"Scope: 4 main groups with subdivision up to the 5th hierarchical level.\"\nLicensed under CC BY-NC-SA 2.0.",
+    "homepage": "https://museumsvokabular.de/ackerbaugerate-systematik/",
     "name": "Thesaurus of Agricultural Tools",
-    "prefix": "497"
+    "prefix": "497",
+    "wikidata_database": "Q126950719"
   },
   "498": {
     "description": "The project purpose is to develop and maintain a reference structured terminology in the domain of the cryosphere environment. The identification of the potential sources of terminology was carried out with the assistance of experts of the Arabba Avalanche Centre. The result consists of a certain number of lists of terms, usually contained in glossaries where they are supplied with one or more definitions and scarcely organised within a structure. In certain cases they are clustered in thematic areas. The terms of these lists were selected according to their pertinence and relevance.\n\nAt present we are working on a database of around 3.700 terms. The thematic areas, covered at present, deal with snow and ice physics, snow and ice morphology, snow and ice radiometry, remote sensing and GIS in cryosphere environment, sea ice, avalanches and glaciers. Concerning the vertical structure we adopted the Classification Scheme already in use for the development of the EARTh Thesaurus. The hierarchical setup is based on facets; according to its intrinsic features, the structure can be used as a semantic reference system, stable and partially independent from the context.\n\nSince the facet structure tends to scatter the terms under the more general referral category, we are implementing a thematic structure that will cluster the terms in themes representing specific sectors. The possibility of applying different thematic schemes allows the exploration of concepts according to different perspectives, which is able to emphasize particular and contingent aspects.",

bioregistry/external/biolink/processed.json

@@ -146,6 +146,9 @@
   "METANETX.REACTION": {
     "uri_format": "https://www.metanetx.org/equa_info/$1"
   },
+  "METPO": {
+    "uri_format": "https://w3id.org/metpo/$1"
+  },
   "MI": {
     "uri_format": "http://purl.obolibrary.org/obo/MI_$1"
   },