benchling-v3-sdk-python 5.0.0__py3-none-any.whl

benchling_v3_sdk/nucleotide_alignment/raw_client.py

@@ -0,0 +1,2331 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+from json.decoder import JSONDecodeError
+
+from ..core.api_error import ApiError
+from ..core.client_wrapper import AsyncClientWrapper, SyncClientWrapper
+from ..core.http_response import AsyncHttpResponse, HttpResponse
+from ..core.jsonable_encoder import encode_path_param
+from ..core.pagination import AsyncPager, SyncPager
+from ..core.parse_error import ParsingError
+from ..core.pydantic_utilities import parse_obj_as
+from ..core.request_options import RequestOptions
+from ..core.serialization import convert_and_respect_annotation_metadata
+from ..errors.bad_request_error import BadRequestError
+from ..errors.forbidden_error import ForbiddenError
+from ..errors.internal_server_error import InternalServerError
+from ..errors.not_found_error import NotFoundError
+from ..errors.too_many_requests_error import TooManyRequestsError
+from ..types.aligned_nucleotide_sequence import AlignedNucleotideSequence
+from ..types.aligned_nucleotide_sequence_paginated_list import AlignedNucleotideSequencePaginatedList
+from ..types.alignment_file_input import AlignmentFileInput
+from ..types.async_task_link import AsyncTaskLink
+from ..types.clustal_o_options_input import ClustalOOptionsInput
+from ..types.delete_nucleotide_alignment_input_with_path_params import DeleteNucleotideAlignmentInputWithPathParams
+from ..types.general_error import GeneralError
+from ..types.internal_server_error_body import InternalServerErrorBody
+from ..types.mafft_options_input import MafftOptionsInput
+from ..types.new_sequence_input import NewSequenceInput
+from ..types.nucleotide_alignment import NucleotideAlignment
+from ..types.nucleotide_alignment_paginated_list import NucleotideAlignmentPaginatedList
+from .types.batch_delete_nucleotide_alignment_response import BatchDeleteNucleotideAlignmentResponse
+from .types.create_consensus_alignment_input_algorithm import CreateConsensusAlignmentInputAlgorithm
+from .types.create_template_alignment_input_algorithm import CreateTemplateAlignmentInputAlgorithm
+from .types.get_task_for_create_consensus_alignment_nucleotide_alignment_response import (
+    GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse,
+)
+from .types.get_task_for_create_template_alignment_nucleotide_alignment_response import (
+    GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse,
+)
+from .types.list_nucleotide_alignment_request_sort import ListNucleotideAlignmentRequestSort
+from pydantic import ValidationError
+
+# this is used as the default value for optional parameters
+OMIT = typing.cast(typing.Any, ...)
+
+
+class RawNucleotideAlignmentClient:
+    def __init__(self, *, client_wrapper: SyncClientWrapper):
+        self._client_wrapper = client_wrapper
+
+    def list(
+        self,
+        *,
+        created_at_gt: typing.Optional[str] = None,
+        created_at_gte: typing.Optional[str] = None,
+        created_at_lt: typing.Optional[str] = None,
+        created_at_lte: typing.Optional[str] = None,
+        id_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        modified_at_gt: typing.Optional[str] = None,
+        modified_at_gte: typing.Optional[str] = None,
+        modified_at_lt: typing.Optional[str] = None,
+        modified_at_lte: typing.Optional[str] = None,
+        name_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        name_any_of_case_sensitive: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        next_token: typing.Optional[str] = None,
+        omit: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        page_size: typing.Optional[int] = None,
+        returning: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        sequence_ids_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        sort: typing.Optional[ListNucleotideAlignmentRequestSort] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> SyncPager[NucleotideAlignment, NucleotideAlignmentPaginatedList]:
+        """
+        List NucleotideAlignment items.
+
+        Parameters
+        ----------
+        created_at_gt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created after the specified time. e.g. > 2017-04-30.
+
+        created_at_gte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or after the specified time. e.g. >= 2017-04-30.
+
+        created_at_lt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created before the specified time. e.g. < 2017-04-30.
+
+        created_at_lte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or before the specified time. e.g. <= 2017-04-30.
+
+        id_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those matching any of the specified IDs. Comma-separated list.
+
+        modified_at_gt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified after the specified time. e.g. > 2017-04-30.
+
+        modified_at_gte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified at or after the specified time. e.g. >= 2017-04-30.
+
+        modified_at_lt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified before the specified time. e.g. < 2017-04-30.
+
+        modified_at_lte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified at or before the specified time. e.g. <= 2017-04-30.
+
+        name_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those that match any of the specified names. Case insensitive. Warning - this filter can be non-performant due to case insensitivity. Ensure only one name filter is used at a time. Comma-separated list.
+
+        name_any_of_case_sensitive : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those that match any of the specified names. Case sensitive. Ensure only one name filter is used at a time. Comma-separated list.
+
+        next_token : typing.Optional[str]
+            Token for pagination
+
+        omit : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to omit from each returned item. Cannot overlap with returning.
+
+        page_size : typing.Optional[int]
+            Number of results to return. Defaults to 50, maximum of 100.
+
+        returning : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to include in each returned item. Cannot overlap with omit.
+
+        sequence_ids_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to Nucleotide Alignments owned by any of the specified sequence IDs (i.e. sequences used as the template in a Template Alignment or created as the consensus sequence from a Consensus Alignment). Fails and reports any invalid IDs. Comma-separated list.
+
+        sort : typing.Optional[ListNucleotideAlignmentRequestSort]
+            Method by which to order results. Valid sorts are: createdAt (created time, oldest first) and modifiedAt (modified time, oldest first). Use :asc or :desc to specify ascending or descending order. Default is modifiedAt:desc.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        SyncPager[NucleotideAlignment, NucleotideAlignmentPaginatedList]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment/items",
+            method="GET",
+            params={
+                "createdAt.gt": created_at_gt,
+                "createdAt.gte": created_at_gte,
+                "createdAt.lt": created_at_lt,
+                "createdAt.lte": created_at_lte,
+                "id.anyOf": ",".join(map(str, id_any_of)) if isinstance(id_any_of, (list, tuple, set)) else id_any_of,
+                "modifiedAt.gt": modified_at_gt,
+                "modifiedAt.gte": modified_at_gte,
+                "modifiedAt.lt": modified_at_lt,
+                "modifiedAt.lte": modified_at_lte,
+                "name.anyOf": ",".join(map(str, name_any_of))
+                if isinstance(name_any_of, (list, tuple, set))
+                else name_any_of,
+                "name.anyOf.caseSensitive": ",".join(map(str, name_any_of_case_sensitive))
+                if isinstance(name_any_of_case_sensitive, (list, tuple, set))
+                else name_any_of_case_sensitive,
+                "nextToken": next_token,
+                "omit": ",".join(map(str, omit)) if isinstance(omit, (list, tuple, set)) else omit,
+                "pageSize": page_size,
+                "returning": ",".join(map(str, returning)) if isinstance(returning, (list, tuple, set)) else returning,
+                "sequenceIds.anyOf": ",".join(map(str, sequence_ids_any_of))
+                if isinstance(sequence_ids_any_of, (list, tuple, set))
+                else sequence_ids_any_of,
+                "sort": sort,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _parsed_response = typing.cast(
+                    NucleotideAlignmentPaginatedList,
+                    parse_obj_as(
+                        type_=NucleotideAlignmentPaginatedList,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                _items = _parsed_response.items
+                _parsed_next = _parsed_response.next_token
+                _has_next = _parsed_next is not None and _parsed_next != ""
+                _get_next = lambda: self.list(
+                    created_at_gt=created_at_gt,
+                    created_at_gte=created_at_gte,
+                    created_at_lt=created_at_lt,
+                    created_at_lte=created_at_lte,
+                    id_any_of=id_any_of,
+                    modified_at_gt=modified_at_gt,
+                    modified_at_gte=modified_at_gte,
+                    modified_at_lt=modified_at_lt,
+                    modified_at_lte=modified_at_lte,
+                    name_any_of=name_any_of,
+                    name_any_of_case_sensitive=name_any_of_case_sensitive,
+                    next_token=_parsed_next,
+                    omit=omit,
+                    page_size=page_size,
+                    returning=returning,
+                    sequence_ids_any_of=sequence_ids_any_of,
+                    sort=sort,
+                    request_options=request_options,
+                )
+                return SyncPager(has_next=_has_next, items=_items, get_next=_get_next, response=_parsed_response)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def get(
+        self,
+        nucleotide_alignment_id: str,
+        *,
+        returning: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        omit: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> HttpResponse[NucleotideAlignment]:
+        """
+        Get a single NucleotideAlignment by ID.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        returning : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to include in each returned item. Cannot overlap with omit.
+
+        omit : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to omit from each returned item. Cannot overlap with returning.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[NucleotideAlignment]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}",
+            method="GET",
+            params={
+                "returning": ",".join(map(str, returning)) if isinstance(returning, (list, tuple, set)) else returning,
+                "omit": ",".join(map(str, omit)) if isinstance(omit, (list, tuple, set)) else omit,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    NucleotideAlignment,
+                    parse_obj_as(
+                        type_=NucleotideAlignment,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def delete(
+        self, nucleotide_alignment_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> HttpResponse[None]:
+        """
+        Delete NucleotideAlignment.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[None]
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}",
+            method="DELETE",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                return HttpResponse(response=_response, data=None)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def list_aligned_nucleotide_sequences(
+        self,
+        nucleotide_alignment_id: str,
+        *,
+        next_token: typing.Optional[str] = None,
+        page_size: typing.Optional[int] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> SyncPager[AlignedNucleotideSequence, AlignedNucleotideSequencePaginatedList]:
+        """
+        List AlignedNucleotideSequence items.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        next_token : typing.Optional[str]
+            Token for pagination
+
+        page_size : typing.Optional[int]
+            Number of results to return. Defaults to 50, maximum of 100.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        SyncPager[AlignedNucleotideSequence, AlignedNucleotideSequencePaginatedList]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}/aligned-nucleotide-sequences/items",
+            method="GET",
+            params={
+                "nextToken": next_token,
+                "pageSize": page_size,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _parsed_response = typing.cast(
+                    AlignedNucleotideSequencePaginatedList,
+                    parse_obj_as(
+                        type_=AlignedNucleotideSequencePaginatedList,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                _items = _parsed_response.items
+                _parsed_next = _parsed_response.next_token
+                _has_next = _parsed_next is not None and _parsed_next != ""
+                _get_next = lambda: self.list_aligned_nucleotide_sequences(
+                    nucleotide_alignment_id,
+                    next_token=_parsed_next,
+                    page_size=page_size,
+                    request_options=request_options,
+                )
+                return SyncPager(has_next=_has_next, items=_items, get_next=_get_next, response=_parsed_response)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def batch_delete(
+        self,
+        *,
+        items: typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams],
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> HttpResponse[BatchDeleteNucleotideAlignmentResponse]:
+        """
+        Batch delete NucleotideAlignment synchronously in one transaction. Maximum 25 items per request.
+
+        Parameters
+        ----------
+        items : typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams]
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[BatchDeleteNucleotideAlignmentResponse]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:batch-delete",
+            method="POST",
+            json={
+                "items": convert_and_respect_annotation_metadata(
+                    object_=items,
+                    annotation=typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams],
+                    direction="write",
+                ),
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    BatchDeleteNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=BatchDeleteNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def create_consensus_alignment(
+        self,
+        *,
+        algorithm: CreateConsensusAlignmentInputAlgorithm,
+        files: typing.Sequence[AlignmentFileInput],
+        clustalo_options: typing.Optional[ClustalOOptionsInput] = OMIT,
+        mafft_options: typing.Optional[MafftOptionsInput] = OMIT,
+        name: typing.Optional[str] = OMIT,
+        new_sequence: typing.Optional[NewSequenceInput] = OMIT,
+        sequence_id: typing.Optional[str] = OMIT,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> HttpResponse[AsyncTaskLink]:
+        """
+        Create a consensus nucleotide alignment
+
+        Parameters
+        ----------
+        algorithm : CreateConsensusAlignmentInputAlgorithm
+            Multiple sequence alignment algorithm to use.
+
+        files : typing.Sequence[AlignmentFileInput]
+            Sequence files to align. Minimum 2, maximum 250.
+
+        clustalo_options : typing.Optional[ClustalOOptionsInput]
+            Options to pass to the ClustalO algorithm, only applicable for ClustalO.
+
+        mafft_options : typing.Optional[MafftOptionsInput]
+            Options to pass to the MAFFT algorithm, only applicable for MAFFT.
+
+        name : typing.Optional[str]
+            The name of the alignment. When omitted, a name is automatically generated. If specified, it must contain at least one non-whitespace character. Up to 255 characters.
+
+        new_sequence : typing.Optional[NewSequenceInput]
+            Specifies a folder in which to create a new NucleotideSequence to store the consensus alignment result. Mutually exclusive with sequenceId.
+
+        sequence_id : typing.Optional[str]
+            API ID of an existing empty NucleotideSequence to overwrite with the consensus alignment result. The target sequence must have no bases; requests fail with 'Sequence must be empty' otherwise. Mutually exclusive with newSequence.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[AsyncTaskLink]
+            Task started
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:create-consensus-alignment",
+            method="POST",
+            json={
+                "algorithm": algorithm,
+                "clustaloOptions": convert_and_respect_annotation_metadata(
+                    object_=clustalo_options, annotation=ClustalOOptionsInput, direction="write"
+                ),
+                "files": convert_and_respect_annotation_metadata(
+                    object_=files, annotation=typing.Sequence[AlignmentFileInput], direction="write"
+                ),
+                "mafftOptions": convert_and_respect_annotation_metadata(
+                    object_=mafft_options, annotation=MafftOptionsInput, direction="write"
+                ),
+                "name": name,
+                "newSequence": convert_and_respect_annotation_metadata(
+                    object_=new_sequence, annotation=NewSequenceInput, direction="write"
+                ),
+                "sequenceId": sequence_id,
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    AsyncTaskLink,
+                    parse_obj_as(
+                        type_=AsyncTaskLink,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def create_template_alignment(
+        self,
+        *,
+        algorithm: CreateTemplateAlignmentInputAlgorithm,
+        files: typing.Sequence[AlignmentFileInput],
+        template_sequence_id: str,
+        clustalo_options: typing.Optional[ClustalOOptionsInput] = OMIT,
+        disable_circular_sequence_rotation: typing.Optional[bool] = OMIT,
+        mafft_options: typing.Optional[MafftOptionsInput] = OMIT,
+        name: typing.Optional[str] = OMIT,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> HttpResponse[AsyncTaskLink]:
+        """
+        Create a template nucleotide alignment
+
+        Parameters
+        ----------
+        algorithm : CreateTemplateAlignmentInputAlgorithm
+            Multiple sequence alignment algorithm to use.
+
+        files : typing.Sequence[AlignmentFileInput]
+            Sequence files to align against the template. Minimum 1, maximum 250.
+
+        template_sequence_id : str
+            The API ID of the template (reference) sequence to align against.
+
+        clustalo_options : typing.Optional[ClustalOOptionsInput]
+            Options to pass to the ClustalO algorithm, only applicable for ClustalO.
+
+        disable_circular_sequence_rotation : typing.Optional[bool]
+            When true, disables circular sequence rotation during template alignment.
+
+        mafft_options : typing.Optional[MafftOptionsInput]
+            Options to pass to the MAFFT algorithm, only applicable for MAFFT.
+
+        name : typing.Optional[str]
+            The name of the alignment. When omitted, a name is automatically generated. If specified, it must contain at least one non-whitespace character. Up to 255 characters.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[AsyncTaskLink]
+            Task started
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:create-template-alignment",
+            method="POST",
+            json={
+                "algorithm": algorithm,
+                "clustaloOptions": convert_and_respect_annotation_metadata(
+                    object_=clustalo_options, annotation=ClustalOOptionsInput, direction="write"
+                ),
+                "disableCircularSequenceRotation": disable_circular_sequence_rotation,
+                "files": convert_and_respect_annotation_metadata(
+                    object_=files, annotation=typing.Sequence[AlignmentFileInput], direction="write"
+                ),
+                "mafftOptions": convert_and_respect_annotation_metadata(
+                    object_=mafft_options, annotation=MafftOptionsInput, direction="write"
+                ),
+                "name": name,
+                "templateSequenceId": template_sequence_id,
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    AsyncTaskLink,
+                    parse_obj_as(
+                        type_=AsyncTaskLink,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def get_task_for_create_consensus_alignment(
+        self, task_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> HttpResponse[GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse]:
+        """
+        Poll status for Create a consensus nucleotide alignment.
+
+        Parameters
+        ----------
+        task_id : str
+            ID of the asynchronous task to poll.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            f"api/v3/tasks/nucleotide-alignment/create-consensus-alignment/{encode_path_param(task_id)}",
+            method="GET",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    def get_task_for_create_template_alignment(
+        self, task_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> HttpResponse[GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse]:
+        """
+        Poll status for Create a template nucleotide alignment.
+
+        Parameters
+        ----------
+        task_id : str
+            ID of the asynchronous task to poll.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        HttpResponse[GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse]
+            OK
+        """
+        _response = self._client_wrapper.httpx_client.request(
+            f"api/v3/tasks/nucleotide-alignment/create-template-alignment/{encode_path_param(task_id)}",
+            method="GET",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return HttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+
+class AsyncRawNucleotideAlignmentClient:
+    def __init__(self, *, client_wrapper: AsyncClientWrapper):
+        self._client_wrapper = client_wrapper
+
+    async def list(
+        self,
+        *,
+        created_at_gt: typing.Optional[str] = None,
+        created_at_gte: typing.Optional[str] = None,
+        created_at_lt: typing.Optional[str] = None,
+        created_at_lte: typing.Optional[str] = None,
+        id_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        modified_at_gt: typing.Optional[str] = None,
+        modified_at_gte: typing.Optional[str] = None,
+        modified_at_lt: typing.Optional[str] = None,
+        modified_at_lte: typing.Optional[str] = None,
+        name_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        name_any_of_case_sensitive: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        next_token: typing.Optional[str] = None,
+        omit: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        page_size: typing.Optional[int] = None,
+        returning: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        sequence_ids_any_of: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        sort: typing.Optional[ListNucleotideAlignmentRequestSort] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncPager[NucleotideAlignment, NucleotideAlignmentPaginatedList]:
+        """
+        List NucleotideAlignment items.
+
+        Parameters
+        ----------
+        created_at_gt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created after the specified time. e.g. > 2017-04-30.
+
+        created_at_gte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or after the specified time. e.g. >= 2017-04-30.
+
+        created_at_lt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created before the specified time. e.g. < 2017-04-30.
+
+        created_at_lte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those created at or before the specified time. e.g. <= 2017-04-30.
+
+        id_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those matching any of the specified IDs. Comma-separated list.
+
+        modified_at_gt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified after the specified time. e.g. > 2017-04-30.
+
+        modified_at_gte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified at or after the specified time. e.g. >= 2017-04-30.
+
+        modified_at_lt : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified before the specified time. e.g. < 2017-04-30.
+
+        modified_at_lte : typing.Optional[str]
+            Datetime, in RFC 3339 format. Time zone defaults to UTC. Restricts results to those modified at or before the specified time. e.g. <= 2017-04-30.
+
+        name_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those that match any of the specified names. Case insensitive. Warning - this filter can be non-performant due to case insensitivity. Ensure only one name filter is used at a time. Comma-separated list.
+
+        name_any_of_case_sensitive : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to those that match any of the specified names. Case sensitive. Ensure only one name filter is used at a time. Comma-separated list.
+
+        next_token : typing.Optional[str]
+            Token for pagination
+
+        omit : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to omit from each returned item. Cannot overlap with returning.
+
+        page_size : typing.Optional[int]
+            Number of results to return. Defaults to 50, maximum of 100.
+
+        returning : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to include in each returned item. Cannot overlap with omit.
+
+        sequence_ids_any_of : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Restricts results to Nucleotide Alignments owned by any of the specified sequence IDs (i.e. sequences used as the template in a Template Alignment or created as the consensus sequence from a Consensus Alignment). Fails and reports any invalid IDs. Comma-separated list.
+
+        sort : typing.Optional[ListNucleotideAlignmentRequestSort]
+            Method by which to order results. Valid sorts are: createdAt (created time, oldest first) and modifiedAt (modified time, oldest first). Use :asc or :desc to specify ascending or descending order. Default is modifiedAt:desc.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncPager[NucleotideAlignment, NucleotideAlignmentPaginatedList]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment/items",
+            method="GET",
+            params={
+                "createdAt.gt": created_at_gt,
+                "createdAt.gte": created_at_gte,
+                "createdAt.lt": created_at_lt,
+                "createdAt.lte": created_at_lte,
+                "id.anyOf": ",".join(map(str, id_any_of)) if isinstance(id_any_of, (list, tuple, set)) else id_any_of,
+                "modifiedAt.gt": modified_at_gt,
+                "modifiedAt.gte": modified_at_gte,
+                "modifiedAt.lt": modified_at_lt,
+                "modifiedAt.lte": modified_at_lte,
+                "name.anyOf": ",".join(map(str, name_any_of))
+                if isinstance(name_any_of, (list, tuple, set))
+                else name_any_of,
+                "name.anyOf.caseSensitive": ",".join(map(str, name_any_of_case_sensitive))
+                if isinstance(name_any_of_case_sensitive, (list, tuple, set))
+                else name_any_of_case_sensitive,
+                "nextToken": next_token,
+                "omit": ",".join(map(str, omit)) if isinstance(omit, (list, tuple, set)) else omit,
+                "pageSize": page_size,
+                "returning": ",".join(map(str, returning)) if isinstance(returning, (list, tuple, set)) else returning,
+                "sequenceIds.anyOf": ",".join(map(str, sequence_ids_any_of))
+                if isinstance(sequence_ids_any_of, (list, tuple, set))
+                else sequence_ids_any_of,
+                "sort": sort,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _parsed_response = typing.cast(
+                    NucleotideAlignmentPaginatedList,
+                    parse_obj_as(
+                        type_=NucleotideAlignmentPaginatedList,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                _items = _parsed_response.items
+                _parsed_next = _parsed_response.next_token
+                _has_next = _parsed_next is not None and _parsed_next != ""
+
+                async def _get_next():
+                    return await self.list(
+                        created_at_gt=created_at_gt,
+                        created_at_gte=created_at_gte,
+                        created_at_lt=created_at_lt,
+                        created_at_lte=created_at_lte,
+                        id_any_of=id_any_of,
+                        modified_at_gt=modified_at_gt,
+                        modified_at_gte=modified_at_gte,
+                        modified_at_lt=modified_at_lt,
+                        modified_at_lte=modified_at_lte,
+                        name_any_of=name_any_of,
+                        name_any_of_case_sensitive=name_any_of_case_sensitive,
+                        next_token=_parsed_next,
+                        omit=omit,
+                        page_size=page_size,
+                        returning=returning,
+                        sequence_ids_any_of=sequence_ids_any_of,
+                        sort=sort,
+                        request_options=request_options,
+                    )
+
+                return AsyncPager(has_next=_has_next, items=_items, get_next=_get_next, response=_parsed_response)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def get(
+        self,
+        nucleotide_alignment_id: str,
+        *,
+        returning: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        omit: typing.Optional[typing.Union[str, typing.Sequence[str]]] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncHttpResponse[NucleotideAlignment]:
+        """
+        Get a single NucleotideAlignment by ID.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        returning : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to include in each returned item. Cannot overlap with omit.
+
+        omit : typing.Optional[typing.Union[str, typing.Sequence[str]]]
+            Comma-separated list of top-level fields to omit from each returned item. Cannot overlap with returning.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[NucleotideAlignment]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}",
+            method="GET",
+            params={
+                "returning": ",".join(map(str, returning)) if isinstance(returning, (list, tuple, set)) else returning,
+                "omit": ",".join(map(str, omit)) if isinstance(omit, (list, tuple, set)) else omit,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    NucleotideAlignment,
+                    parse_obj_as(
+                        type_=NucleotideAlignment,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def delete(
+        self, nucleotide_alignment_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> AsyncHttpResponse[None]:
+        """
+        Delete NucleotideAlignment.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[None]
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}",
+            method="DELETE",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                return AsyncHttpResponse(response=_response, data=None)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def list_aligned_nucleotide_sequences(
+        self,
+        nucleotide_alignment_id: str,
+        *,
+        next_token: typing.Optional[str] = None,
+        page_size: typing.Optional[int] = None,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncPager[AlignedNucleotideSequence, AlignedNucleotideSequencePaginatedList]:
+        """
+        List AlignedNucleotideSequence items.
+
+        Parameters
+        ----------
+        nucleotide_alignment_id : str
+            ID of the NucleotideAlignment.
+
+        next_token : typing.Optional[str]
+            Token for pagination
+
+        page_size : typing.Optional[int]
+            Number of results to return. Defaults to 50, maximum of 100.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncPager[AlignedNucleotideSequence, AlignedNucleotideSequencePaginatedList]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            f"api/v3/nucleotide-alignment/{encode_path_param(nucleotide_alignment_id)}/aligned-nucleotide-sequences/items",
+            method="GET",
+            params={
+                "nextToken": next_token,
+                "pageSize": page_size,
+            },
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _parsed_response = typing.cast(
+                    AlignedNucleotideSequencePaginatedList,
+                    parse_obj_as(
+                        type_=AlignedNucleotideSequencePaginatedList,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                _items = _parsed_response.items
+                _parsed_next = _parsed_response.next_token
+                _has_next = _parsed_next is not None and _parsed_next != ""
+
+                async def _get_next():
+                    return await self.list_aligned_nucleotide_sequences(
+                        nucleotide_alignment_id,
+                        next_token=_parsed_next,
+                        page_size=page_size,
+                        request_options=request_options,
+                    )
+
+                return AsyncPager(has_next=_has_next, items=_items, get_next=_get_next, response=_parsed_response)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def batch_delete(
+        self,
+        *,
+        items: typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams],
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncHttpResponse[BatchDeleteNucleotideAlignmentResponse]:
+        """
+        Batch delete NucleotideAlignment synchronously in one transaction. Maximum 25 items per request.
+
+        Parameters
+        ----------
+        items : typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams]
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[BatchDeleteNucleotideAlignmentResponse]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:batch-delete",
+            method="POST",
+            json={
+                "items": convert_and_respect_annotation_metadata(
+                    object_=items,
+                    annotation=typing.Sequence[DeleteNucleotideAlignmentInputWithPathParams],
+                    direction="write",
+                ),
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    BatchDeleteNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=BatchDeleteNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def create_consensus_alignment(
+        self,
+        *,
+        algorithm: CreateConsensusAlignmentInputAlgorithm,
+        files: typing.Sequence[AlignmentFileInput],
+        clustalo_options: typing.Optional[ClustalOOptionsInput] = OMIT,
+        mafft_options: typing.Optional[MafftOptionsInput] = OMIT,
+        name: typing.Optional[str] = OMIT,
+        new_sequence: typing.Optional[NewSequenceInput] = OMIT,
+        sequence_id: typing.Optional[str] = OMIT,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncHttpResponse[AsyncTaskLink]:
+        """
+        Create a consensus nucleotide alignment
+
+        Parameters
+        ----------
+        algorithm : CreateConsensusAlignmentInputAlgorithm
+            Multiple sequence alignment algorithm to use.
+
+        files : typing.Sequence[AlignmentFileInput]
+            Sequence files to align. Minimum 2, maximum 250.
+
+        clustalo_options : typing.Optional[ClustalOOptionsInput]
+            Options to pass to the ClustalO algorithm, only applicable for ClustalO.
+
+        mafft_options : typing.Optional[MafftOptionsInput]
+            Options to pass to the MAFFT algorithm, only applicable for MAFFT.
+
+        name : typing.Optional[str]
+            The name of the alignment. When omitted, a name is automatically generated. If specified, it must contain at least one non-whitespace character. Up to 255 characters.
+
+        new_sequence : typing.Optional[NewSequenceInput]
+            Specifies a folder in which to create a new NucleotideSequence to store the consensus alignment result. Mutually exclusive with sequenceId.
+
+        sequence_id : typing.Optional[str]
+            API ID of an existing empty NucleotideSequence to overwrite with the consensus alignment result. The target sequence must have no bases; requests fail with 'Sequence must be empty' otherwise. Mutually exclusive with newSequence.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[AsyncTaskLink]
+            Task started
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:create-consensus-alignment",
+            method="POST",
+            json={
+                "algorithm": algorithm,
+                "clustaloOptions": convert_and_respect_annotation_metadata(
+                    object_=clustalo_options, annotation=ClustalOOptionsInput, direction="write"
+                ),
+                "files": convert_and_respect_annotation_metadata(
+                    object_=files, annotation=typing.Sequence[AlignmentFileInput], direction="write"
+                ),
+                "mafftOptions": convert_and_respect_annotation_metadata(
+                    object_=mafft_options, annotation=MafftOptionsInput, direction="write"
+                ),
+                "name": name,
+                "newSequence": convert_and_respect_annotation_metadata(
+                    object_=new_sequence, annotation=NewSequenceInput, direction="write"
+                ),
+                "sequenceId": sequence_id,
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    AsyncTaskLink,
+                    parse_obj_as(
+                        type_=AsyncTaskLink,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def create_template_alignment(
+        self,
+        *,
+        algorithm: CreateTemplateAlignmentInputAlgorithm,
+        files: typing.Sequence[AlignmentFileInput],
+        template_sequence_id: str,
+        clustalo_options: typing.Optional[ClustalOOptionsInput] = OMIT,
+        disable_circular_sequence_rotation: typing.Optional[bool] = OMIT,
+        mafft_options: typing.Optional[MafftOptionsInput] = OMIT,
+        name: typing.Optional[str] = OMIT,
+        request_options: typing.Optional[RequestOptions] = None,
+    ) -> AsyncHttpResponse[AsyncTaskLink]:
+        """
+        Create a template nucleotide alignment
+
+        Parameters
+        ----------
+        algorithm : CreateTemplateAlignmentInputAlgorithm
+            Multiple sequence alignment algorithm to use.
+
+        files : typing.Sequence[AlignmentFileInput]
+            Sequence files to align against the template. Minimum 1, maximum 250.
+
+        template_sequence_id : str
+            The API ID of the template (reference) sequence to align against.
+
+        clustalo_options : typing.Optional[ClustalOOptionsInput]
+            Options to pass to the ClustalO algorithm, only applicable for ClustalO.
+
+        disable_circular_sequence_rotation : typing.Optional[bool]
+            When true, disables circular sequence rotation during template alignment.
+
+        mafft_options : typing.Optional[MafftOptionsInput]
+            Options to pass to the MAFFT algorithm, only applicable for MAFFT.
+
+        name : typing.Optional[str]
+            The name of the alignment. When omitted, a name is automatically generated. If specified, it must contain at least one non-whitespace character. Up to 255 characters.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[AsyncTaskLink]
+            Task started
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            "api/v3/nucleotide-alignment:create-template-alignment",
+            method="POST",
+            json={
+                "algorithm": algorithm,
+                "clustaloOptions": convert_and_respect_annotation_metadata(
+                    object_=clustalo_options, annotation=ClustalOOptionsInput, direction="write"
+                ),
+                "disableCircularSequenceRotation": disable_circular_sequence_rotation,
+                "files": convert_and_respect_annotation_metadata(
+                    object_=files, annotation=typing.Sequence[AlignmentFileInput], direction="write"
+                ),
+                "mafftOptions": convert_and_respect_annotation_metadata(
+                    object_=mafft_options, annotation=MafftOptionsInput, direction="write"
+                ),
+                "name": name,
+                "templateSequenceId": template_sequence_id,
+            },
+            headers={
+                "content-type": "application/json",
+            },
+            request_options=request_options,
+            omit=OMIT,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    AsyncTaskLink,
+                    parse_obj_as(
+                        type_=AsyncTaskLink,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def get_task_for_create_consensus_alignment(
+        self, task_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> AsyncHttpResponse[GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse]:
+        """
+        Poll status for Create a consensus nucleotide alignment.
+
+        Parameters
+        ----------
+        task_id : str
+            ID of the asynchronous task to poll.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            f"api/v3/tasks/nucleotide-alignment/create-consensus-alignment/{encode_path_param(task_id)}",
+            method="GET",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=GetTaskForCreateConsensusAlignmentNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)
+
+    async def get_task_for_create_template_alignment(
+        self, task_id: str, *, request_options: typing.Optional[RequestOptions] = None
+    ) -> AsyncHttpResponse[GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse]:
+        """
+        Poll status for Create a template nucleotide alignment.
+
+        Parameters
+        ----------
+        task_id : str
+            ID of the asynchronous task to poll.
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AsyncHttpResponse[GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse]
+            OK
+        """
+        _response = await self._client_wrapper.httpx_client.request(
+            f"api/v3/tasks/nucleotide-alignment/create-template-alignment/{encode_path_param(task_id)}",
+            method="GET",
+            request_options=request_options,
+        )
+        try:
+            if 200 <= _response.status_code < 300:
+                _data = typing.cast(
+                    GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse,
+                    parse_obj_as(
+                        type_=GetTaskForCreateTemplateAlignmentNucleotideAlignmentResponse,  # type: ignore
+                        object_=_response.json(),
+                    ),
+                )
+                return AsyncHttpResponse(response=_response, data=_data)
+            if _response.status_code == 400:
+                raise BadRequestError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        typing.Any,
+                        parse_obj_as(
+                            type_=typing.Any,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 403:
+                raise ForbiddenError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 404:
+                raise NotFoundError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 429:
+                raise TooManyRequestsError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        GeneralError,
+                        parse_obj_as(
+                            type_=GeneralError,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            if _response.status_code == 500:
+                raise InternalServerError(
+                    headers=dict(_response.headers),
+                    body=typing.cast(
+                        InternalServerErrorBody,
+                        parse_obj_as(
+                            type_=InternalServerErrorBody,  # type: ignore
+                            object_=_response.json(),
+                        ),
+                    ),
+                )
+            _response_json = _response.json()
+        except JSONDecodeError:
+            raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response.text)
+        except ValidationError as e:
+            raise ParsingError(
+                status_code=_response.status_code, headers=dict(_response.headers), body=_response.json(), cause=e
+            )
+        raise ApiError(status_code=_response.status_code, headers=dict(_response.headers), body=_response_json)