OpenREM 1.0.0b2__py3-none-any.whl → 1.0.0b3__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (279) hide show
  1. openrem/locale/de/LC_MESSAGES/django.po +1060 -1059
  2. openrem/locale/django.pot +973 -972
  3. openrem/locale/es_MX/LC_MESSAGES/django.po +1049 -1048
  4. openrem/locale/it/LC_MESSAGES/django.po +1044 -1043
  5. openrem/locale/lt/LC_MESSAGES/django.po +989 -988
  6. openrem/locale/nb_NO/LC_MESSAGES/django.po +985 -984
  7. openrem/locale/pt_BR/LC_MESSAGES/django.po +1003 -1002
  8. openrem/manage.py +10 -10
  9. openrem/openremproject/__init__.py +1 -1
  10. openrem/openremproject/local_settings.py.linux +128 -128
  11. openrem/openremproject/local_settings.py.windows +144 -144
  12. openrem/openremproject/local_settings.py.windows-sqlite3 +129 -129
  13. openrem/openremproject/settings.py +278 -278
  14. openrem/openremproject/urls.py +32 -32
  15. openrem/openremproject/wsgi.py.example +28 -28
  16. openrem/remapp/__init__.py +2 -2
  17. openrem/remapp/admin.py +31 -31
  18. openrem/remapp/exports/ct_export.py +780 -753
  19. openrem/remapp/exports/dx_export.py +817 -805
  20. openrem/remapp/exports/export_common.py +931 -951
  21. openrem/remapp/exports/export_common_pandas.py +2422 -0
  22. openrem/remapp/exports/exportviews.py +815 -860
  23. openrem/remapp/exports/mg_csv_nhsbsp.py +292 -292
  24. openrem/remapp/exports/mg_export.py +673 -510
  25. openrem/remapp/exports/nm_export.py +796 -575
  26. openrem/remapp/exports/rf_export.py +1418 -1431
  27. openrem/remapp/extractors/ct_philips.py +424 -414
  28. openrem/remapp/extractors/ct_toshiba.py +2116 -2108
  29. openrem/remapp/extractors/dx.py +1033 -952
  30. openrem/remapp/extractors/extract_common.py +817 -817
  31. openrem/remapp/extractors/import_views.py +426 -426
  32. openrem/remapp/extractors/mam.py +685 -672
  33. openrem/remapp/extractors/nm_image.py +439 -431
  34. openrem/remapp/extractors/ptsizecsv2db.py +368 -368
  35. openrem/remapp/extractors/rdsr.py +667 -654
  36. openrem/remapp/extractors/rdsr_methods.py +1771 -1768
  37. openrem/remapp/extractors/rrdsr_methods.py +630 -622
  38. openrem/remapp/fixtures/openskin_safelist.json +11 -11
  39. openrem/remapp/forms.py +2286 -2277
  40. openrem/remapp/interface/chart_functions.py +2412 -2393
  41. openrem/remapp/interface/mod_filters.py +1241 -1243
  42. openrem/remapp/migrations/0001_initial.py.1-0-upgrade +1043 -1043
  43. openrem/remapp/models.py +3418 -3407
  44. openrem/remapp/netdicom/dicomviews.py +681 -683
  45. openrem/remapp/netdicom/qrscu.py +2646 -2646
  46. openrem/remapp/netdicom/tools.py +134 -134
  47. openrem/remapp/static/css/bootstrap-theme.css +587 -587
  48. openrem/remapp/static/css/bootstrap-theme.min.css +4 -4
  49. openrem/remapp/static/css/bootstrap.css +6800 -6800
  50. openrem/remapp/static/css/bootstrap.min.css +4 -4
  51. openrem/remapp/static/css/datepicker3.css +790 -790
  52. openrem/remapp/static/css/jquery.qtip.min.css +2 -2
  53. openrem/remapp/static/css/openrem-extra.css +442 -442
  54. openrem/remapp/static/css/openrem.css +96 -96
  55. openrem/remapp/static/css/registration.css +34 -34
  56. openrem/remapp/static/fonts/glyphicons-halflings-regular.svg +287 -287
  57. openrem/remapp/static/js/bootstrap-datepicker.js +1671 -1671
  58. openrem/remapp/static/js/bootstrap.js +2363 -2363
  59. openrem/remapp/static/js/bootstrap.min.js +6 -6
  60. openrem/remapp/static/js/charts/chartCommonFunctions.js +75 -75
  61. openrem/remapp/static/js/charts/chartFullScreen.js +41 -41
  62. openrem/remapp/static/js/charts/ctChartAjax.js +331 -331
  63. openrem/remapp/static/js/charts/dxChartAjax.js +290 -290
  64. openrem/remapp/static/js/charts/mgChartAjax.js +144 -144
  65. openrem/remapp/static/js/charts/nmChartAjax.js +64 -64
  66. openrem/remapp/static/js/charts/plotly-2.35.2.min.js +8 -0
  67. openrem/remapp/static/js/charts/rfChartAjax.js +128 -128
  68. openrem/remapp/static/js/chroma.min.js +32 -32
  69. openrem/remapp/static/js/datepicker.js +5 -5
  70. openrem/remapp/static/js/dicom.js +115 -115
  71. openrem/remapp/static/js/django_reverse/reverse.js +13 -13
  72. openrem/remapp/static/js/formatDate.js +7 -7
  73. openrem/remapp/static/js/html5shiv.min.js +8 -8
  74. openrem/remapp/static/js/jquery-1.11.0.min.js +4 -4
  75. openrem/remapp/static/js/npm.js +12 -12
  76. openrem/remapp/static/js/respond.min.js +4 -4
  77. openrem/remapp/static/js/skin-dose-maps/jquery.qtip.min.js +4 -4
  78. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMap3dHUDObject.js +112 -112
  79. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMap3dObject.js +367 -367
  80. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMap3dPersonObject.js +158 -158
  81. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMapColourScaleObject.js +153 -153
  82. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMapObject.js +367 -367
  83. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMapping.js +584 -584
  84. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMapping3d.js +255 -255
  85. openrem/remapp/static/js/skin-dose-maps/rfSkinDoseMappingAjax.js +267 -212
  86. openrem/remapp/static/js/skin-dose-maps/three.min.js +835 -835
  87. openrem/remapp/static/js/sorttable.js +495 -495
  88. openrem/remapp/templates/base.html +253 -253
  89. openrem/remapp/templates/registration/changepassword.html +25 -25
  90. openrem/remapp/templates/registration/changepassworddone.html +12 -12
  91. openrem/remapp/templates/registration/login.html +42 -42
  92. openrem/remapp/templates/remapp/backgroundtaskmaximumrows_form.html +29 -29
  93. openrem/remapp/templates/remapp/base.html +1 -1
  94. openrem/remapp/templates/remapp/ctdetail.html +235 -235
  95. openrem/remapp/templates/remapp/ctfiltered.html +310 -310
  96. openrem/remapp/templates/remapp/dicomdeletesettings_form.html +31 -31
  97. openrem/remapp/templates/remapp/dicomqr.html +147 -147
  98. openrem/remapp/templates/remapp/dicomquerydetails.html +83 -83
  99. openrem/remapp/templates/remapp/dicomqueryimages.html +49 -49
  100. openrem/remapp/templates/remapp/dicomqueryseries.html +109 -109
  101. openrem/remapp/templates/remapp/dicomquerysummary.html +48 -48
  102. openrem/remapp/templates/remapp/dicomremoteqr_confirm_delete.html +60 -60
  103. openrem/remapp/templates/remapp/dicomremoteqr_form.html +32 -32
  104. openrem/remapp/templates/remapp/dicomstorescp_confirm_delete.html +53 -53
  105. openrem/remapp/templates/remapp/dicomstorescp_form.html +48 -48
  106. openrem/remapp/templates/remapp/dicomsummary.html +257 -257
  107. openrem/remapp/templates/remapp/displaychartoptions.html +184 -184
  108. openrem/remapp/templates/remapp/displayhomepageoptions.html +57 -57
  109. openrem/remapp/templates/remapp/displayname-count.html +6 -6
  110. openrem/remapp/templates/remapp/displayname-last-date.html +3 -3
  111. openrem/remapp/templates/remapp/displayname-modality.html +86 -105
  112. openrem/remapp/templates/remapp/displayname-skinmap.html +18 -18
  113. openrem/remapp/templates/remapp/displaynameupdate.html +100 -100
  114. openrem/remapp/templates/remapp/displaynameview.html +222 -219
  115. openrem/remapp/templates/remapp/dxdetail.html +176 -176
  116. openrem/remapp/templates/remapp/dxfiltered.html +324 -324
  117. openrem/remapp/templates/remapp/exports-active.html +25 -25
  118. openrem/remapp/templates/remapp/exports-complete.html +35 -35
  119. openrem/remapp/templates/remapp/exports-error.html +26 -26
  120. openrem/remapp/templates/remapp/exports-queue.html +18 -18
  121. openrem/remapp/templates/remapp/exports.html +191 -191
  122. openrem/remapp/templates/remapp/failed_summary_list.html +27 -27
  123. openrem/remapp/templates/remapp/filteredbase.html +162 -162
  124. openrem/remapp/templates/remapp/highdosemetricalertsettings_form.html +76 -76
  125. openrem/remapp/templates/remapp/home-list-modalities.html +94 -94
  126. openrem/remapp/templates/remapp/home.html +202 -202
  127. openrem/remapp/templates/remapp/list_filters.html +24 -24
  128. openrem/remapp/templates/remapp/mgdetail.html +160 -138
  129. openrem/remapp/templates/remapp/mgfiltered.html +311 -311
  130. openrem/remapp/templates/remapp/nmdetail.html +300 -300
  131. openrem/remapp/templates/remapp/nmfiltered.html +255 -255
  132. openrem/remapp/templates/remapp/notpatient.html +190 -190
  133. openrem/remapp/templates/remapp/notpatientindicators_form_base.html +81 -81
  134. openrem/remapp/templates/remapp/notpatientindicatorsid_confirm_delete.html +54 -54
  135. openrem/remapp/templates/remapp/notpatientindicatorsid_form.html +23 -23
  136. openrem/remapp/templates/remapp/notpatientindicatorsname_confirm_delete.html +54 -54
  137. openrem/remapp/templates/remapp/notpatientindicatorsname_form.html +23 -23
  138. openrem/remapp/templates/remapp/notpatientindicatorsname_form_base.html +85 -85
  139. openrem/remapp/templates/remapp/openskinsafelist_add.html +130 -130
  140. openrem/remapp/templates/remapp/openskinsafelist_confirm_delete.html +100 -100
  141. openrem/remapp/templates/remapp/openskinsafelist_form.html +207 -207
  142. openrem/remapp/templates/remapp/patientidsettings_form.html +83 -83
  143. openrem/remapp/templates/remapp/populate_summary_progress.html +83 -83
  144. openrem/remapp/templates/remapp/populate_summary_progress_error.html +36 -36
  145. openrem/remapp/templates/remapp/review_failed_imports.html +157 -157
  146. openrem/remapp/templates/remapp/review_failed_study.html +41 -41
  147. openrem/remapp/templates/remapp/review_studies_delete_button.html +20 -20
  148. openrem/remapp/templates/remapp/review_study.html +19 -19
  149. openrem/remapp/templates/remapp/review_summary_list.html +245 -245
  150. openrem/remapp/templates/remapp/rf_dose_alert_email_template.html +14 -1
  151. openrem/remapp/templates/remapp/rfalertnotificationsview.html +59 -59
  152. openrem/remapp/templates/remapp/rfdetail.html +547 -543
  153. openrem/remapp/templates/remapp/rfdetailbase.html +18 -18
  154. openrem/remapp/templates/remapp/rffiltered.html +404 -404
  155. openrem/remapp/templates/remapp/sizeimports.html +119 -119
  156. openrem/remapp/templates/remapp/sizeprocess.html +96 -96
  157. openrem/remapp/templates/remapp/sizeupload.html +110 -110
  158. openrem/remapp/templates/remapp/skindosemapcalcsettings_form.html +28 -28
  159. openrem/remapp/templates/remapp/standardname-modality.html +69 -69
  160. openrem/remapp/templates/remapp/standardnames_confirm_delete.html +71 -71
  161. openrem/remapp/templates/remapp/standardnames_form.html +87 -87
  162. openrem/remapp/templates/remapp/standardnamesettings_form.html +41 -41
  163. openrem/remapp/templates/remapp/standardnamesrefreshall.html +92 -92
  164. openrem/remapp/templates/remapp/standardnameview.html +103 -103
  165. openrem/remapp/templates/remapp/study_confirm_delete.html +147 -147
  166. openrem/remapp/templates/remapp/task_admin.html +265 -265
  167. openrem/remapp/templates/remapp/tasks.html +76 -76
  168. openrem/remapp/templatetags/formfilters.py +13 -13
  169. openrem/remapp/templatetags/proper_paginate.py +38 -38
  170. openrem/remapp/templatetags/remappduration.py +36 -36
  171. openrem/remapp/templatetags/sigdig.py +38 -38
  172. openrem/remapp/templatetags/sort_class_property_value.py +15 -15
  173. openrem/remapp/templatetags/update_variable.py +20 -20
  174. openrem/remapp/templatetags/url_replace.py +25 -25
  175. openrem/remapp/tests/test_charts_common.py +202 -202
  176. openrem/remapp/tests/test_charts_ct.py +7111 -7111
  177. openrem/remapp/tests/test_charts_dx.py +3513 -3513
  178. openrem/remapp/tests/test_charts_mg.py +1116 -1115
  179. openrem/remapp/tests/test_dcmdatetime.py +189 -189
  180. openrem/remapp/tests/test_dicom_qr.py +2580 -2580
  181. openrem/remapp/tests/test_display_name.py +274 -274
  182. openrem/remapp/tests/test_export_ct_xlsx.py +272 -248
  183. openrem/remapp/tests/test_export_dx_xlsx.py +137 -134
  184. openrem/remapp/tests/test_export_mammo_csv.py +242 -242
  185. openrem/remapp/tests/test_export_rf_xlsx.py +246 -246
  186. openrem/remapp/tests/test_files/DX-Im-DRGEM.dcm +0 -0
  187. openrem/remapp/tests/test_files/MG-RDSR-GEPristina-2D.dcm +0 -0
  188. openrem/remapp/tests/test_files/MG-RDSR-GEPristina-DBT.dcm +0 -0
  189. openrem/remapp/tests/test_files/MG-RDSR-Giotto-DBT.dcm +0 -0
  190. openrem/remapp/tests/test_files/skin_map_alphenix.py +590 -590
  191. openrem/remapp/tests/test_files/skin_map_zee.py +354 -354
  192. openrem/remapp/tests/test_filters_ct.py +321 -321
  193. openrem/remapp/tests/test_filters_dx.py +92 -92
  194. openrem/remapp/tests/test_filters_mammo.py +183 -183
  195. openrem/remapp/tests/test_filters_rf.py +118 -118
  196. openrem/remapp/tests/test_get_values.py +72 -72
  197. openrem/remapp/tests/test_hash_id.py +65 -65
  198. openrem/remapp/tests/test_import_ct_esr_ge.py +3034 -3034
  199. openrem/remapp/tests/test_import_ct_philips_rdsr.py +42 -42
  200. openrem/remapp/tests/test_import_ct_rdsr_multiple.py +256 -256
  201. openrem/remapp/tests/test_import_ct_rdsr_siemens.py +827 -827
  202. openrem/remapp/tests/test_import_ct_rdsr_spectrumdynamics.py +91 -91
  203. openrem/remapp/tests/test_import_ct_rdsr_toshiba_dosecheck.py +67 -67
  204. openrem/remapp/tests/test_import_ct_rdsr_toshiba_multivaluesd.py +33 -33
  205. openrem/remapp/tests/test_import_ct_rdsr_toshiba_pixelmed.py +118 -118
  206. openrem/remapp/tests/test_import_ct_sc_philips.py +44 -44
  207. openrem/remapp/tests/test_import_dual_rdsr.py +110 -110
  208. openrem/remapp/tests/test_import_dx.py +1267 -1191
  209. openrem/remapp/tests/test_import_dx_rdsr.py +1250 -1253
  210. openrem/remapp/tests/test_import_mam.py +438 -438
  211. openrem/remapp/tests/test_import_mg_im_hol_proj.py +46 -46
  212. openrem/remapp/tests/test_import_mg_rdsr.py +586 -586
  213. openrem/remapp/tests/test_import_nm_image.py +420 -420
  214. openrem/remapp/tests/test_import_nm_siemens_rdsr.py +396 -396
  215. openrem/remapp/tests/test_import_px.py +161 -161
  216. openrem/remapp/tests/test_import_rf_rdsr.py +420 -418
  217. openrem/remapp/tests/test_missing_date.py +42 -42
  218. openrem/remapp/tests/test_not_patient.py +60 -60
  219. openrem/remapp/tests/test_openskin.py +272 -272
  220. openrem/remapp/tests/test_patient_id_settings.py +72 -72
  221. openrem/remapp/tests/test_pt_size_import.py +232 -232
  222. openrem/remapp/tests/test_rf_detail.py +113 -113
  223. openrem/remapp/tests/test_rf_high_dose_alert.py +361 -361
  224. openrem/remapp/tools/background.py +361 -361
  225. openrem/remapp/tools/check_standard_name_status.py +47 -0
  226. openrem/remapp/tools/check_uid.py +70 -70
  227. openrem/remapp/tools/dcmdatetime.py +248 -248
  228. openrem/remapp/tools/default_import.py +44 -47
  229. openrem/remapp/tools/get_values.py +230 -230
  230. openrem/remapp/tools/hash_id.py +58 -58
  231. openrem/remapp/tools/make_skin_map.py +448 -406
  232. openrem/remapp/tools/not_patient_indicators.py +72 -72
  233. openrem/remapp/tools/openskin/calc_exp_map.py +173 -173
  234. openrem/remapp/tools/openskin/geomclass.py +475 -475
  235. openrem/remapp/tools/openskin/geomfunc.py +433 -432
  236. openrem/remapp/tools/openskin/skinmap.py +417 -417
  237. openrem/remapp/tools/populate_summary.py +185 -193
  238. openrem/remapp/tools/save_skin_map_structure.py +73 -73
  239. openrem/remapp/tools/send_high_dose_alert_emails.py +238 -207
  240. openrem/remapp/urls.py +456 -448
  241. openrem/remapp/version.py +11 -11
  242. openrem/remapp/views.py +1147 -1052
  243. openrem/remapp/views_admin.py +3876 -3936
  244. openrem/remapp/views_charts_ct.py +2110 -2058
  245. openrem/remapp/views_charts_dx.py +1906 -1836
  246. openrem/remapp/views_charts_mg.py +1349 -1196
  247. openrem/remapp/views_charts_nm.py +535 -535
  248. openrem/remapp/views_charts_rf.py +1219 -1241
  249. openrem/remapp/views_openskin.py +379 -384
  250. openrem/sample-config/openrem-consumer.service +12 -12
  251. openrem/sample-config/openrem-gunicorn.service +13 -13
  252. openrem/sample-config/openrem-server +14 -13
  253. openrem/sample-config/openrem_orthanc_config_linux.lua +454 -454
  254. openrem/sample-config/openrem_orthanc_config_windows.lua +455 -455
  255. openrem/sample-config/queue-init.bat +73 -73
  256. openrem/scripts/openrem_ctphilips.py +25 -25
  257. openrem/scripts/openrem_cttoshiba.py +28 -28
  258. openrem/scripts/openrem_dx.py +22 -22
  259. openrem/scripts/openrem_mg.py +22 -22
  260. openrem/scripts/openrem_nm.py +22 -22
  261. openrem/scripts/openrem_ptsizecsv.py +17 -17
  262. openrem/scripts/openrem_qr.py +12 -12
  263. openrem/scripts/openrem_rdsr.py +25 -25
  264. {OpenREM-1.0.0b2.dist-info → openrem-1.0.0b3.dist-info}/METADATA +39 -29
  265. openrem-1.0.0b3.dist-info/RECORD +379 -0
  266. {OpenREM-1.0.0b2.dist-info → openrem-1.0.0b3.dist-info}/WHEEL +1 -1
  267. {OpenREM-1.0.0b2.dist-info → openrem-1.0.0b3.dist-info/licenses}/COPYING-GPLv3 +674 -674
  268. {OpenREM-1.0.0b2.dist-info → openrem-1.0.0b3.dist-info/licenses}/LICENSE +22 -22
  269. OpenREM-1.0.0b2.dist-info/RECORD +0 -373
  270. openrem/remapp/static/js/charts/plotly-2.17.1.min.js +0 -8
  271. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_ctphilips.py +0 -0
  272. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_cttoshiba.py +0 -0
  273. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_dx.py +0 -0
  274. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_mg.py +0 -0
  275. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_nm.py +0 -0
  276. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_ptsizecsv.py +0 -0
  277. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_qr.py +0 -0
  278. {OpenREM-1.0.0b2.data → openrem-1.0.0b3.data}/scripts/openrem_rdsr.py +0 -0
  279. {OpenREM-1.0.0b2.dist-info → openrem-1.0.0b3.dist-info}/top_level.txt +0 -0
@@ -1,1243 +1,1241 @@
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- # pylint: disable=line-too-long, too-many-lines
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- # OpenREM - Radiation Exposure Monitoring tools for the physicist
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- # Copyright (C) 2012,2013 The Royal Marsden NHS Foundation Trust
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- #
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- # This program is free software: you can redistribute it and/or modify
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- # it under the terms of the GNU General Public License as published by
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- # the Free Software Foundation, either version 3 of the License, or
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- # (at your option) any later version.
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- #
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- # This program is distributed in the hope that it will be useful,
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- # but WITHOUT ANY WARRANTY; without even the implied warranty of
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- # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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- # GNU General Public License for more details.
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- #
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- # Additional permission under section 7 of GPLv3:
16
- # You shall not make any use of the name of The Royal Marsden NHS
17
- # Foundation trust in connection with this Program in any press or
18
- # other public announcement without the prior written consent of
19
- # The Royal Marsden NHS Foundation Trust.
20
- #
21
- # You should have received a copy of the GNU General Public License
22
- # along with this program. If not, see <http://www.gnu.org/licenses/>.
23
-
24
- """
25
- .. module:: mod_filters.
26
- :synopsis: Module for filtering studies on the summary filter pages.
27
-
28
- .. moduleauthor:: Ed McDonagh
29
-
30
- """
31
-
32
- from decimal import Decimal, InvalidOperation
33
- import logging
34
-
35
- from django import forms
36
- from django.core.exceptions import ObjectDoesNotExist
37
- from django.db.models import Q
38
- import django_filters
39
-
40
- from remapp.models import (
41
- GeneralStudyModuleAttr,
42
- CtIrradiationEventData,
43
- StandardNames,
44
- StandardNameSettings,
45
- )
46
- from ..tools.hash_id import hash_id
47
-
48
- logger = logging.getLogger(__name__)
49
-
50
- TEST_CHOICES = (("", "Yes (default)"), (2, "No (caution)"))
51
-
52
-
53
- def custom_name_filter(queryset, name, value):
54
- """Search for name as plain text and encrypted"""
55
- if not value:
56
- return queryset
57
- filtered = queryset.filter(
58
- (
59
- Q(patientmoduleattr__name_hashed=False)
60
- & Q(patientmoduleattr__patient_name__icontains=value)
61
- )
62
- | (
63
- Q(patientmoduleattr__name_hashed=True)
64
- & Q(patientmoduleattr__patient_name__exact=hash_id(value))
65
- )
66
- )
67
- return filtered
68
-
69
-
70
- def custom_id_filter(queryset, name, value):
71
- """Search for ID as plain text and encrypted"""
72
- if not value:
73
- return queryset
74
- filtered = queryset.filter(
75
- (
76
- Q(patientmoduleattr__id_hashed=False)
77
- & Q(patientmoduleattr__patient_id__icontains=value)
78
- )
79
- | (
80
- Q(patientmoduleattr__id_hashed=True)
81
- & Q(patientmoduleattr__patient_id__exact=hash_id(value))
82
- )
83
- )
84
- return filtered
85
-
86
-
87
- def _custom_acc_filter(queryset, name, value):
88
- """Search for accession number as plain text and encrypted"""
89
- if not value:
90
- return queryset
91
- filtered = queryset.filter(
92
- (Q(accession_hashed=False) & Q(accession_number__icontains=value))
93
- | (Q(accession_hashed=True) & Q(accession_number__exact=hash_id(value)))
94
- )
95
- return filtered
96
-
97
-
98
- def _dap_filter(queryset, name, value):
99
- """Modify DAP to Gy.m2 before filtering"""
100
- if not value or not name:
101
- return queryset
102
- try:
103
- value_gy_m2 = Decimal(value) / Decimal(1000000)
104
- except InvalidOperation:
105
- return queryset
106
- if "study_dap_min" in name:
107
- filtered = queryset.filter(total_dap__gte=value_gy_m2)
108
- elif "study_dap_max" in name:
109
- filtered = queryset.filter(total_dap__lte=value_gy_m2)
110
- elif "event_dap_min" in name:
111
- filtered = queryset.filter(
112
- projectionxrayradiationdose__irradeventxraydata__dose_area_product__gte=value_gy_m2
113
- )
114
- elif "event_dap_max" in name:
115
- filtered = queryset.filter(
116
- projectionxrayradiationdose__irradeventxraydata__dose_area_product__lte=value_gy_m2
117
- )
118
- else:
119
- return queryset
120
- return filtered
121
-
122
-
123
- class DateTimeOrderingFilter(django_filters.OrderingFilter):
124
-
125
- """Custom filter to order by date and time as they are two seperate fields"""
126
-
127
- def __init__(self, *args, **kwargs):
128
- super(DateTimeOrderingFilter, self).__init__(*args, **kwargs)
129
- self.extra["choices"] += (
130
- ("-time_date", "Exam date ⬇"),
131
- ("time_date", "Exam date ⬆"),
132
- )
133
-
134
- def filter(self, qs, value):
135
- """Sets order_by to date then time and returns queryset
136
-
137
- :param qs: queryset
138
- :param value: list containing ordering type as string
139
- :return: ordered queryset
140
- """
141
- # OrderingFilter is CSV-based, so `value` is a list
142
- if value and any(v in ["time_date", "-time_date"] for v in value):
143
- if "-time_date" in value:
144
- return qs.order_by("-study_date", "-study_time")
145
- if "time_date" in value:
146
- return qs.order_by("study_date", "study_time")
147
-
148
- return super(DateTimeOrderingFilter, self).filter(qs, value)
149
-
150
-
151
- class RFSummaryListFilter(django_filters.FilterSet):
152
-
153
- """Filter for fluoroscopy studies to display in web interface."""
154
-
155
- study_date__gt = django_filters.DateFilter(
156
- lookup_expr="gte",
157
- label="Date from",
158
- field_name="study_date",
159
- widget=forms.TextInput(attrs={"class": "datepicker"}),
160
- )
161
- study_date__lt = django_filters.DateFilter(
162
- lookup_expr="lte",
163
- label="Date until",
164
- field_name="study_date",
165
- widget=forms.TextInput(attrs={"class": "datepicker"}),
166
- )
167
- study_description = django_filters.CharFilter(
168
- lookup_expr="icontains", label="Study description"
169
- )
170
- procedure_code_meaning = django_filters.CharFilter(
171
- lookup_expr="icontains", label="Procedure"
172
- )
173
- requested_procedure_code_meaning = django_filters.CharFilter(
174
- lookup_expr="icontains", label="Requested procedure"
175
- )
176
- projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
177
- django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
178
- )
179
- patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
180
- lookup_expr="gte",
181
- label="Min age (yrs)",
182
- field_name="patientstudymoduleattr__patient_age_decimal",
183
- )
184
- patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
185
- lookup_expr="lte",
186
- label="Max age (yrs)",
187
- field_name="patientstudymoduleattr__patient_age_decimal",
188
- )
189
- patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
190
- lookup_expr="gte",
191
- label="Min weight (kg)",
192
- field_name="patientstudymoduleattr__patient_weight",
193
- )
194
- patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
195
- lookup_expr="lte",
196
- label="Max weight (kg)",
197
- field_name="patientstudymoduleattr__patient_weight",
198
- )
199
- generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
200
- lookup_expr="icontains", label="Hospital"
201
- )
202
- generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
203
- lookup_expr="icontains", label="Make"
204
- )
205
- generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
206
- lookup_expr="icontains", label="Model"
207
- )
208
- generalequipmentmoduleattr__station_name = django_filters.CharFilter(
209
- lookup_expr="icontains", label="Station name"
210
- )
211
- performing_physician_name = django_filters.CharFilter(
212
- lookup_expr="icontains", label="Physician"
213
- )
214
- accession_number = django_filters.CharFilter(
215
- method=_custom_acc_filter, label="Accession number"
216
- )
217
- study_dap_min = django_filters.NumberFilter(
218
- method=_dap_filter, label="Min study DAP (cGy·cm²)"
219
- )
220
- study_dap_max = django_filters.NumberFilter(
221
- method=_dap_filter, label="Max study DAP (cGy·cm²)"
222
- )
223
- generalequipmentmoduleattr__unique_equipment_name__display_name = (
224
- django_filters.CharFilter(lookup_expr="icontains", label="Display name")
225
- )
226
- test_data = django_filters.ChoiceFilter(
227
- lookup_expr="isnull",
228
- label="Include possible test data",
229
- field_name="patientmoduleattr__not_patient_indicator",
230
- choices=TEST_CHOICES,
231
- widget=forms.Select,
232
- )
233
-
234
- class Meta:
235
- """
236
- Lists fields and order-by information for django-filter filtering
237
- """
238
-
239
- model = GeneralStudyModuleAttr
240
- fields = [
241
- "study_date__gt",
242
- "study_date__lt",
243
- "study_description",
244
- "procedure_code_meaning",
245
- "requested_procedure_code_meaning",
246
- "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
247
- "generalequipmentmoduleattr__institution_name",
248
- "generalequipmentmoduleattr__manufacturer",
249
- "generalequipmentmoduleattr__manufacturer_model_name",
250
- "generalequipmentmoduleattr__station_name",
251
- "patientstudymoduleattr__patient_age_decimal__gte",
252
- "patientstudymoduleattr__patient_age_decimal__lte",
253
- "patientstudymoduleattr__patient_weight__gte",
254
- "patientstudymoduleattr__patient_weight__lte",
255
- "performing_physician_name",
256
- "accession_number",
257
- "study_dap_min",
258
- "study_dap_max",
259
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
260
- "test_data",
261
- ]
262
-
263
- o = DateTimeOrderingFilter(
264
- choices=(
265
- ("study_description", "Study Description"),
266
- ("generalequipmentmoduleattr__institution_name", "Hospital"),
267
- ("generalequipmentmoduleattr__manufacturer", "Make"),
268
- ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
269
- (
270
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
271
- "Display name",
272
- ),
273
- ("study_description", "Study description"),
274
- ("-total_dap", "Total DAP"),
275
- ("-total_rp_dose_a", "Total RP Dose (A)"),
276
- ),
277
- fields=(
278
- ("study_description", "study_description"),
279
- (
280
- "generalequipmentmoduleattr__institution_name",
281
- "generalequipmentmoduleattr__institution_name",
282
- ),
283
- (
284
- "generalequipmentmoduleattr__manufacturer",
285
- "generalequipmentmoduleattr__manufacturer",
286
- ),
287
- (
288
- "generalequipmentmoduleattr__manufacturer_model_name",
289
- "generalequipmentmoduleattr__manufacturer_model_name",
290
- ),
291
- (
292
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
293
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
294
- ),
295
- ("study_description", "study_description"),
296
- ("total_dap", "-total_dap"),
297
- ("total_rp_dose_a", "-total_rp_dose_a"),
298
- ),
299
- )
300
-
301
-
302
- class RFFilterPlusStdNames(RFSummaryListFilter):
303
- """Adding standard name fields"""
304
-
305
- standard_names__standard_name = django_filters.CharFilter(
306
- lookup_expr="icontains",
307
- label="Standard study name",
308
- )
309
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
310
- lookup_expr="icontains", label="Standard acquisition name"
311
- )
312
-
313
-
314
- class RFFilterPlusPid(RFSummaryListFilter):
315
-
316
- """Adding patient name and ID to filter if permissions allow"""
317
-
318
- def __init__(self, *args, **kwargs):
319
- super(RFFilterPlusPid, self).__init__(*args, **kwargs)
320
- self.filters["patient_name"] = django_filters.CharFilter(
321
- method=custom_name_filter, label="Patient name"
322
- )
323
- self.filters["patient_id"] = django_filters.CharFilter(
324
- method=custom_id_filter, label="Patient ID"
325
- )
326
-
327
-
328
- class RFFilterPlusPidPlusStdNames(RFFilterPlusPid):
329
- """Adding standard name fields"""
330
-
331
- standard_names__standard_name = django_filters.CharFilter(
332
- lookup_expr="icontains",
333
- label="Standard study name",
334
- )
335
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
336
- lookup_expr="icontains", label="Standard acquisition name"
337
- )
338
-
339
-
340
- EVENT_NUMBER_CHOICES = (
341
- (None, "Any"),
342
- (0, "None"),
343
- ("some", ">0"),
344
- (1, "1"),
345
- (2, "2"),
346
- (3, "3"),
347
- (4, "4"),
348
- (5, "5"),
349
- (6, "6"),
350
- (7, "7"),
351
- (8, "8"),
352
- (9, "9"),
353
- (10, "10"),
354
- ("more", ">10"),
355
- )
356
-
357
-
358
- def _specify_event_numbers(queryset, name, value):
359
-
360
- """Method filter for specifying number of events in each study
361
-
362
- :param queryset: Study list
363
- :param name: field name (not used)
364
- :param value: number of events
365
- :return: filtered queryset
366
- """
367
- try:
368
- value = int(value)
369
- except ValueError:
370
- if value == "more":
371
- min_value = 10
372
- elif value == "some":
373
- min_value = 0
374
- else:
375
- return queryset
376
- if "num_events" in name:
377
- filtered = queryset.filter(number_of_events__gt=min_value)
378
- elif "num_spiral_events" in name:
379
- filtered = queryset.filter(number_of_spiral__gt=min_value)
380
- elif "num_axial_events" in name:
381
- filtered = queryset.filter(number_of_axial__gt=min_value)
382
- elif "num_spr_events" in name:
383
- filtered = queryset.filter(number_of_const_angle__gt=min_value)
384
- elif "num_stationary_events" in name:
385
- filtered = queryset.filter(number_of_stationary__gt=min_value)
386
- else:
387
- return queryset
388
- return filtered
389
- if "num_events" in name:
390
- filtered = queryset.filter(number_of_events__exact=value)
391
- elif "num_spiral_events" in name:
392
- filtered = queryset.filter(number_of_spiral__exact=value)
393
- elif "num_axial_events" in name:
394
- filtered = queryset.filter(number_of_axial__exact=value)
395
- elif "num_spr_events" in name:
396
- filtered = queryset.filter(number_of_const_angle__exact=value)
397
- elif "num_stationary_events" in name:
398
- filtered = queryset.filter(number_of_stationary__exact=value)
399
- else:
400
- return queryset
401
- return filtered
402
-
403
-
404
- class CTSummaryListFilter(django_filters.FilterSet):
405
-
406
- """Filter for CT studies to display in web interface."""
407
-
408
- study_date__gt = django_filters.DateFilter(
409
- lookup_expr="gte",
410
- label="Date from",
411
- field_name="study_date",
412
- widget=forms.TextInput(attrs={"class": "datepicker"}),
413
- )
414
- study_date__lt = django_filters.DateFilter(
415
- lookup_expr="lte",
416
- label="Date until",
417
- field_name="study_date",
418
- widget=forms.TextInput(attrs={"class": "datepicker"}),
419
- )
420
- study_description = django_filters.CharFilter(
421
- lookup_expr="icontains", label="Study description"
422
- )
423
- procedure_code_meaning = django_filters.CharFilter(
424
- lookup_expr="icontains", label="Procedure"
425
- )
426
- requested_procedure_code_meaning = django_filters.CharFilter(
427
- lookup_expr="icontains", label="Requested procedure"
428
- )
429
- ctradiationdose__ctirradiationeventdata__acquisition_protocol = (
430
- django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
431
- )
432
- patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
433
- lookup_expr="gte",
434
- label="Min age (yrs)",
435
- field_name="patientstudymoduleattr__patient_age_decimal",
436
- )
437
- patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
438
- lookup_expr="lte",
439
- label="Max age (yrs)",
440
- field_name="patientstudymoduleattr__patient_age_decimal",
441
- )
442
- patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
443
- lookup_expr="gte",
444
- label="Min weight (kg)",
445
- field_name="patientstudymoduleattr__patient_weight",
446
- )
447
- patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
448
- lookup_expr="lte",
449
- label="Max weight (kg)",
450
- field_name="patientstudymoduleattr__patient_weight",
451
- )
452
- generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
453
- lookup_expr="icontains", label="Hospital"
454
- )
455
- generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
456
- lookup_expr="icontains", label="Make"
457
- )
458
- generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
459
- lookup_expr="icontains", label="Model"
460
- )
461
- generalequipmentmoduleattr__station_name = django_filters.CharFilter(
462
- lookup_expr="icontains", label="Station name"
463
- )
464
- accession_number = django_filters.CharFilter(
465
- method=_custom_acc_filter, label="Accession number"
466
- )
467
- total_dlp__gte = django_filters.NumberFilter(
468
- lookup_expr="gte", field_name="total_dlp", label="Min study DLP"
469
- )
470
- total_dlp__lte = django_filters.NumberFilter(
471
- lookup_expr="lte", field_name="total_dlp", label="Max study DLP"
472
- )
473
- generalequipmentmoduleattr__unique_equipment_name__display_name = (
474
- django_filters.CharFilter(lookup_expr="icontains", label="Display name")
475
- )
476
- test_data = django_filters.ChoiceFilter(
477
- lookup_expr="isnull",
478
- label="Include possible test data",
479
- field_name="patientmoduleattr__not_patient_indicator",
480
- choices=TEST_CHOICES,
481
- widget=forms.Select,
482
- )
483
- num_events = django_filters.ChoiceFilter(
484
- method=_specify_event_numbers,
485
- label="Num. events total",
486
- choices=EVENT_NUMBER_CHOICES,
487
- widget=forms.Select,
488
- )
489
- num_spiral_events = django_filters.ChoiceFilter(
490
- method=_specify_event_numbers,
491
- label="Num. spiral events",
492
- choices=EVENT_NUMBER_CHOICES,
493
- widget=forms.Select,
494
- )
495
- num_axial_events = django_filters.ChoiceFilter(
496
- method=_specify_event_numbers,
497
- label="Num. axial events",
498
- choices=EVENT_NUMBER_CHOICES,
499
- widget=forms.Select,
500
- )
501
- num_spr_events = django_filters.ChoiceFilter(
502
- method=_specify_event_numbers,
503
- label="Num. localisers",
504
- choices=EVENT_NUMBER_CHOICES,
505
- widget=forms.Select,
506
- )
507
- num_stationary_events = django_filters.ChoiceFilter(
508
- method=_specify_event_numbers,
509
- label="Num. stationary events",
510
- choices=EVENT_NUMBER_CHOICES,
511
- widget=forms.Select,
512
- )
513
-
514
- class Meta:
515
- """
516
- Lists fields and order-by information for django-filter filtering
517
- """
518
-
519
- model = GeneralStudyModuleAttr
520
- fields = [
521
- "study_date__gt",
522
- "study_date__lt",
523
- "study_description",
524
- "procedure_code_meaning",
525
- "requested_procedure_code_meaning",
526
- "ctradiationdose__ctirradiationeventdata__acquisition_protocol",
527
- "generalequipmentmoduleattr__institution_name",
528
- "generalequipmentmoduleattr__manufacturer",
529
- "generalequipmentmoduleattr__manufacturer_model_name",
530
- "generalequipmentmoduleattr__station_name",
531
- "patientstudymoduleattr__patient_age_decimal__gte",
532
- "patientstudymoduleattr__patient_age_decimal__lte",
533
- "patientstudymoduleattr__patient_weight__gte",
534
- "patientstudymoduleattr__patient_weight__lte",
535
- "accession_number",
536
- "total_dlp__gte",
537
- "total_dlp__lte",
538
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
539
- "test_data",
540
- "num_events",
541
- "num_spiral_events",
542
- "num_axial_events",
543
- "num_spr_events",
544
- "num_stationary_events",
545
- ]
546
-
547
- o = DateTimeOrderingFilter(
548
- choices=(
549
- ("study_description", "Study Description"),
550
- ("generalequipmentmoduleattr__institution_name", "Hospital"),
551
- ("generalequipmentmoduleattr__manufacturer", "Make"),
552
- ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
553
- (
554
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
555
- "Display name",
556
- ),
557
- ("study_description", "Study description"),
558
- ("-total_dlp", "Total DLP"),
559
- ),
560
- fields=(
561
- ("study_description", "study_description"),
562
- (
563
- "generalequipmentmoduleattr__institution_name",
564
- "generalequipmentmoduleattr__institution_name",
565
- ),
566
- (
567
- "generalequipmentmoduleattr__manufacturer",
568
- "generalequipmentmoduleattr__manufacturer",
569
- ),
570
- (
571
- "generalequipmentmoduleattr__manufacturer_model_name",
572
- "generalequipmentmoduleattr__manufacturer_model_name",
573
- ),
574
- (
575
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
576
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
577
- ),
578
- ("study_description", "study_description"),
579
- ("total_dlp", "-total_dlp"),
580
- ),
581
- )
582
-
583
-
584
- class CTFilterPlusStdNames(CTSummaryListFilter):
585
- """Adding standard name fields"""
586
-
587
- standard_names__standard_name = django_filters.CharFilter(
588
- lookup_expr="icontains", label="Standard study name"
589
- )
590
- ctradiationdose__ctirradiationeventdata__standard_protocols__standard_name = (
591
- django_filters.CharFilter(
592
- lookup_expr="icontains", label="Standard acquisition name"
593
- )
594
- )
595
-
596
-
597
- class CTFilterPlusPid(CTSummaryListFilter):
598
-
599
- """Adding patient name and ID to filter if permissions allow"""
600
-
601
- def __init__(self, *args, **kwargs):
602
- super(CTFilterPlusPid, self).__init__(*args, **kwargs)
603
- self.filters["patient_name"] = django_filters.CharFilter(
604
- method=custom_name_filter, label="Patient name"
605
- )
606
- self.filters["patient_id"] = django_filters.CharFilter(
607
- method=custom_id_filter, label="Patient ID"
608
- )
609
-
610
-
611
- class CTFilterPlusPidPlusStdNames(CTFilterPlusPid):
612
- """Adding standard name fields"""
613
-
614
- standard_names__standard_name = django_filters.CharFilter(
615
- lookup_expr="icontains", label="Standard study name"
616
- )
617
- ctradiationdose__ctirradiationeventdata__standard_protocols__standard_name = (
618
- django_filters.CharFilter(
619
- lookup_expr="icontains", label="Standard acquisition name"
620
- )
621
- )
622
-
623
-
624
- def ct_acq_filter(filters, pid=False):
625
-
626
- # Obtain the system-level enable_standard_names setting
627
- try:
628
- StandardNameSettings.objects.get()
629
- except ObjectDoesNotExist:
630
- StandardNameSettings.objects.create()
631
- enable_standard_names = StandardNameSettings.objects.values_list(
632
- "enable_standard_names", flat=True
633
- )[0]
634
-
635
- studies = GeneralStudyModuleAttr.objects.filter(modality_type__exact="CT")
636
-
637
- if pid:
638
- if enable_standard_names:
639
- return CTFilterPlusPidPlusStdNames(
640
- filters, studies.order_by("-study_date", "-study_time").distinct()
641
- )
642
- else:
643
- return CTFilterPlusPid(
644
- filters, studies.order_by("-study_date", "-study_time").distinct()
645
- )
646
- if enable_standard_names:
647
- return CTFilterPlusStdNames(
648
- filters, studies.order_by("-study_date", "-study_time").distinct()
649
- )
650
- else:
651
- return CTSummaryListFilter(
652
- filters, studies.order_by("-study_date", "-study_time").distinct()
653
- )
654
-
655
-
656
- class MGSummaryListFilter(django_filters.FilterSet):
657
-
658
- """Filter for mammography studies to display in web interface."""
659
-
660
- study_date__gt = django_filters.DateFilter(
661
- lookup_expr="gte",
662
- label="Date from",
663
- field_name="study_date",
664
- widget=forms.TextInput(attrs={"class": "datepicker"}),
665
- )
666
- study_date__lt = django_filters.DateFilter(
667
- lookup_expr="lte",
668
- label="Date until",
669
- field_name="study_date",
670
- widget=forms.TextInput(attrs={"class": "datepicker"}),
671
- )
672
- study_description = django_filters.CharFilter(
673
- lookup_expr="icontains", label="Study description"
674
- )
675
- procedure_code_meaning = django_filters.CharFilter(
676
- lookup_expr="icontains", label="Procedure"
677
- )
678
- requested_procedure_code_meaning = django_filters.CharFilter(
679
- lookup_expr="icontains", label="Requested procedure"
680
- )
681
- projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
682
- django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
683
- )
684
- projectionxrayradiationdose__irradeventxraydata__image_view__code_meaning = (
685
- django_filters.CharFilter(lookup_expr="icontains", label="View code")
686
- )
687
- projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness__range = django_filters.NumericRangeFilter(
688
- lookup_expr="range",
689
- label="Breast thickness range (mm)",
690
- field_name="projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness",
691
- )
692
- projectionxrayradiationdose__irradeventxraydata__irradeventxraysourcedata__exposure_control_mode = django_filters.CharFilter(
693
- lookup_expr="icontains", label="Exposure control mode"
694
- )
695
- patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
696
- lookup_expr="gte",
697
- label="Min age (yrs)",
698
- field_name="patientstudymoduleattr__patient_age_decimal",
699
- )
700
- patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
701
- lookup_expr="lte",
702
- label="Max age (yrs)",
703
- field_name="patientstudymoduleattr__patient_age_decimal",
704
- )
705
- generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
706
- lookup_expr="icontains", label="Hospital"
707
- )
708
- generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
709
- lookup_expr="icontains", label="Make"
710
- )
711
- generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
712
- lookup_expr="icontains", label="Model"
713
- )
714
- generalequipmentmoduleattr__station_name = django_filters.CharFilter(
715
- lookup_expr="icontains", label="Station name"
716
- )
717
- accession_number = django_filters.CharFilter(
718
- method=_custom_acc_filter, label="Accession number"
719
- )
720
- generalequipmentmoduleattr__unique_equipment_name__display_name = (
721
- django_filters.CharFilter(lookup_expr="icontains", label="Display name")
722
- )
723
- num_events = django_filters.ChoiceFilter(
724
- method=_specify_event_numbers,
725
- label="Num. events total",
726
- choices=EVENT_NUMBER_CHOICES,
727
- widget=forms.Select,
728
- )
729
- test_data = django_filters.ChoiceFilter(
730
- lookup_expr="isnull",
731
- label="Include possible test data",
732
- field_name="patientmoduleattr__not_patient_indicator",
733
- choices=TEST_CHOICES,
734
- widget=forms.Select,
735
- )
736
-
737
- class Meta:
738
- """
739
- Lists fields and order-by information for django-filter filtering
740
- """
741
-
742
- model = GeneralStudyModuleAttr
743
- fields = [
744
- "study_date__gt",
745
- "study_date__lt",
746
- "study_description",
747
- "procedure_code_meaning",
748
- "requested_procedure_code_meaning",
749
- "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
750
- "projectionxrayradiationdose__irradeventxraydata__image_view__code_meaning",
751
- "projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness__range",
752
- "projectionxrayradiationdose__irradeventxraydata__irradeventxraysourcedata__exposure_control_mode",
753
- "generalequipmentmoduleattr__institution_name",
754
- "generalequipmentmoduleattr__manufacturer",
755
- "generalequipmentmoduleattr__manufacturer_model_name",
756
- "generalequipmentmoduleattr__station_name",
757
- "patientstudymoduleattr__patient_age_decimal__gte",
758
- "patientstudymoduleattr__patient_age_decimal__lte",
759
- "accession_number",
760
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
761
- "num_events",
762
- "test_data",
763
- ]
764
-
765
- o = DateTimeOrderingFilter(
766
- choices=(
767
- ("study_description", "Study Description"),
768
- ("generalequipmentmoduleattr__institution_name", "Hospital"),
769
- ("generalequipmentmoduleattr__manufacturer", "Make"),
770
- ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
771
- (
772
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
773
- "Display name",
774
- ),
775
- ("study_description", "Study description"),
776
- ("procedure_code_meaning", "Procedure"),
777
- ("-total_agd_left", "AGD (left)"),
778
- ("-total_agd_right", "AGD (right)"),
779
- ),
780
- fields=(
781
- ("study_description", "study_description"),
782
- (
783
- "generalequipmentmoduleattr__institution_name",
784
- "generalequipmentmoduleattr__institution_name",
785
- ),
786
- (
787
- "generalequipmentmoduleattr__manufacturer",
788
- "generalequipmentmoduleattr__manufacturer",
789
- ),
790
- (
791
- "generalequipmentmoduleattr__manufacturer_model_name",
792
- "generalequipmentmoduleattr__manufacturer_model_name",
793
- ),
794
- (
795
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
796
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
797
- ),
798
- ("study_description", "study_description"),
799
- ("procedure_doce_meaning", "procedure_code_menaing"),
800
- ("total_agd_left", "-total_agd_left"),
801
- ("total_agd_right", "-total_agd_right"),
802
- ),
803
- )
804
-
805
-
806
- class MGFilterPlusStdNames(MGSummaryListFilter):
807
- """Adding standard name fields"""
808
-
809
- standard_names__standard_name = django_filters.CharFilter(
810
- lookup_expr="icontains",
811
- label="Standard study name",
812
- )
813
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
814
- lookup_expr="icontains", label="Standard acquisition name"
815
- )
816
-
817
-
818
- class MGFilterPlusPid(MGSummaryListFilter):
819
- """Adding patient name and ID to filter if permissions allow"""
820
-
821
- def __init__(self, *args, **kwargs):
822
- super(MGFilterPlusPid, self).__init__(*args, **kwargs)
823
- self.filters["patient_name"] = django_filters.CharFilter(
824
- method=custom_name_filter, label="Patient name"
825
- )
826
- self.filters["patient_id"] = django_filters.CharFilter(
827
- method=custom_id_filter, label="Patient ID"
828
- )
829
-
830
-
831
- class MGFilterPlusPidPlusStdNames(MGFilterPlusPid):
832
- """Adding standard name fields"""
833
-
834
- standard_names__standard_name = django_filters.CharFilter(
835
- lookup_expr="icontains",
836
- label="Standard study name",
837
- )
838
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
839
- lookup_expr="icontains", label="Standard acquisition name"
840
- )
841
-
842
-
843
- class DXSummaryListFilter(django_filters.FilterSet):
844
-
845
- """Filter for DX studies to display in web interface."""
846
-
847
- study_date__gt = django_filters.DateFilter(
848
- lookup_expr="gte",
849
- label="Date from",
850
- field_name="study_date",
851
- widget=forms.TextInput(attrs={"class": "datepicker"}),
852
- )
853
- study_date__lt = django_filters.DateFilter(
854
- lookup_expr="lte",
855
- label="Date until",
856
- field_name="study_date",
857
- widget=forms.TextInput(attrs={"class": "datepicker"}),
858
- )
859
- study_description = django_filters.CharFilter(
860
- lookup_expr="icontains", label="Study description"
861
- )
862
- procedure_code_meaning = django_filters.CharFilter(
863
- lookup_expr="icontains", label="Procedure"
864
- )
865
- requested_procedure_code_meaning = django_filters.CharFilter(
866
- lookup_expr="icontains", label="Requested procedure"
867
- )
868
- projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
869
- django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
870
- )
871
- patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
872
- lookup_expr="gte",
873
- label="Min age (yrs)",
874
- field_name="patientstudymoduleattr__patient_age_decimal",
875
- )
876
- patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
877
- lookup_expr="lte",
878
- label="Max age (yrs)",
879
- field_name="patientstudymoduleattr__patient_age_decimal",
880
- )
881
- patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
882
- lookup_expr="gte",
883
- label="Min weight (kg)",
884
- field_name="patientstudymoduleattr__patient_weight",
885
- )
886
- patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
887
- lookup_expr="lte",
888
- label="Max weight (kg)",
889
- field_name="patientstudymoduleattr__patient_weight",
890
- )
891
- generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
892
- lookup_expr="icontains", label="Hospital"
893
- )
894
- generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
895
- lookup_expr="icontains", label="Make"
896
- )
897
- generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
898
- lookup_expr="icontains", label="Model"
899
- )
900
- generalequipmentmoduleattr__station_name = django_filters.CharFilter(
901
- lookup_expr="icontains", label="Station name"
902
- )
903
- accession_number = django_filters.CharFilter(
904
- method=_custom_acc_filter, label="Accession number"
905
- )
906
- study_dap_min = django_filters.NumberFilter(
907
- method=_dap_filter, label="Min study DAP (cGy·cm²)"
908
- )
909
- study_dap_max = django_filters.NumberFilter(
910
- method=_dap_filter, label="Max study DAP (cGy·cm²)"
911
- )
912
- event_dap_min = django_filters.NumberFilter(
913
- method=_dap_filter, label="Min acquisition DAP (cGy·cm²)"
914
- )
915
- event_dap_max = django_filters.NumberFilter(
916
- method=_dap_filter, label="Max acquisition DAP (cGy·cm²)"
917
- )
918
- generalequipmentmoduleattr__unique_equipment_name__display_name = (
919
- django_filters.CharFilter(lookup_expr="icontains", label="Display name")
920
- )
921
- num_events = django_filters.ChoiceFilter(
922
- method=_specify_event_numbers,
923
- label="Num. events total",
924
- choices=EVENT_NUMBER_CHOICES,
925
- widget=forms.Select,
926
- )
927
- test_data = django_filters.ChoiceFilter(
928
- lookup_expr="isnull",
929
- label="Include possible test data",
930
- field_name="patientmoduleattr__not_patient_indicator",
931
- choices=TEST_CHOICES,
932
- widget=forms.Select,
933
- )
934
-
935
- class Meta:
936
- """
937
- Lists fields and order-by information for django-filter filtering
938
- """
939
-
940
- model = GeneralStudyModuleAttr
941
- fields = [
942
- "study_date__gt",
943
- "study_date__lt",
944
- "study_description",
945
- "procedure_code_meaning",
946
- "requested_procedure_code_meaning",
947
- "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
948
- "generalequipmentmoduleattr__institution_name",
949
- "generalequipmentmoduleattr__manufacturer",
950
- "generalequipmentmoduleattr__manufacturer_model_name",
951
- "generalequipmentmoduleattr__station_name",
952
- "patientstudymoduleattr__patient_age_decimal__gte",
953
- "patientstudymoduleattr__patient_age_decimal__lte",
954
- "patientstudymoduleattr__patient_weight__gte",
955
- "patientstudymoduleattr__patient_weight__lte",
956
- "accession_number",
957
- "study_dap_min",
958
- "study_dap_max",
959
- "event_dap_min",
960
- "event_dap_max",
961
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
962
- "num_events",
963
- "test_data",
964
- ]
965
-
966
- o = DateTimeOrderingFilter(
967
- choices=(
968
- ("study_description", "Study Description"),
969
- ("generalequipmentmoduleattr__institution_name", "Hospital"),
970
- ("generalequipmentmoduleattr__manufacturer", "Make"),
971
- ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
972
- (
973
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
974
- "Display name",
975
- ),
976
- ("study_description", "Study description"),
977
- ("-total_dap", "Total DAP"),
978
- ),
979
- fields=(
980
- ("study_description", "study_description"),
981
- (
982
- "generalequipmentmoduleattr__institution_name",
983
- "generalequipmentmoduleattr__institution_name",
984
- ),
985
- (
986
- "generalequipmentmoduleattr__manufacturer",
987
- "generalequipmentmoduleattr__manufacturer",
988
- ),
989
- (
990
- "generalequipmentmoduleattr__manufacturer_model_name",
991
- "generalequipmentmoduleattr__manufacturer_model_name",
992
- ),
993
- (
994
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
995
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
996
- ),
997
- ("study_description", "study_description"),
998
- ("total_dap", "-total_dap"),
999
- ),
1000
- )
1001
-
1002
-
1003
- class DXFilterPlusStdNames(DXSummaryListFilter):
1004
- """Adding standard name fields"""
1005
-
1006
- standard_names__standard_name = django_filters.CharFilter(
1007
- lookup_expr="icontains", label="Standard study name"
1008
- )
1009
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
1010
- lookup_expr="icontains", label="Standard acquisition name"
1011
- )
1012
-
1013
-
1014
- class DXFilterPlusPid(DXSummaryListFilter):
1015
-
1016
- """Adding patient name and ID to filter if permissions allow"""
1017
-
1018
- def __init__(self, *args, **kwargs):
1019
- super(DXFilterPlusPid, self).__init__(*args, **kwargs)
1020
- self.filters["patient_name"] = django_filters.CharFilter(
1021
- method=custom_name_filter, label="Patient name"
1022
- )
1023
- self.filters["patient_id"] = django_filters.CharFilter(
1024
- method=custom_id_filter, label="Patient ID"
1025
- )
1026
-
1027
-
1028
- class DXFilterPlusPidPlusStdNames(DXFilterPlusPid):
1029
- """Adding standard name fields"""
1030
-
1031
- standard_names__standard_name = django_filters.CharFilter(
1032
- lookup_expr="icontains", label="Standard study name"
1033
- )
1034
- projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
1035
- lookup_expr="icontains", label="Standard acquisition name"
1036
- )
1037
-
1038
-
1039
- def dx_acq_filter(filters, pid=False):
1040
-
1041
- # Obtain the system-level enable_standard_names setting
1042
- try:
1043
- StandardNameSettings.objects.get()
1044
- except ObjectDoesNotExist:
1045
- StandardNameSettings.objects.create()
1046
- enable_standard_names = StandardNameSettings.objects.values_list(
1047
- "enable_standard_names", flat=True
1048
- )[0]
1049
-
1050
- studies = GeneralStudyModuleAttr.objects.filter(
1051
- Q(modality_type__exact="DX")
1052
- | Q(modality_type__exact="CR")
1053
- | Q(modality_type__exact="PX")
1054
- )
1055
-
1056
- if pid:
1057
- if enable_standard_names:
1058
- return DXFilterPlusPidPlusStdNames(
1059
- filters,
1060
- queryset=studies.order_by("-study_date", "-study_time").distinct(),
1061
- )
1062
- else:
1063
- return DXFilterPlusPid(
1064
- filters,
1065
- queryset=studies.order_by("-study_date", "-study_time").distinct(),
1066
- )
1067
- if enable_standard_names:
1068
- return DXFilterPlusStdNames(
1069
- filters, queryset=studies.order_by("-study_date", "-study_time").distinct()
1070
- )
1071
- else:
1072
- return DXSummaryListFilter(
1073
- filters, queryset=studies.order_by("-study_date", "-study_time").distinct()
1074
- )
1075
-
1076
-
1077
- class NMSummaryListFilter(django_filters.FilterSet):
1078
- """
1079
- Filter for NM studies to display in web interface.
1080
- """
1081
-
1082
- study_date__gt = django_filters.DateFilter(
1083
- lookup_expr="gte",
1084
- label="Date from",
1085
- field_name="study_date",
1086
- widget=forms.TextInput(attrs={"class": "datepicker"}),
1087
- )
1088
- study_date__lt = django_filters.DateFilter(
1089
- lookup_expr="lte",
1090
- label="Date until",
1091
- field_name="study_date",
1092
- widget=forms.TextInput(attrs={"class": "datepicker"}),
1093
- )
1094
- study_description = django_filters.CharFilter(
1095
- lookup_expr="icontains", label="Study description"
1096
- )
1097
- procedure_code_meaning = django_filters.CharFilter(
1098
- lookup_expr="icontains", label="Procedure"
1099
- )
1100
- requested_procedure_code_meaning = django_filters.CharFilter(
1101
- lookup_expr="icontains", label="Requested procedure"
1102
- )
1103
- patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
1104
- lookup_expr="gte",
1105
- label="Min age (yrs)",
1106
- field_name="patientstudymoduleattr__patient_age_decimal",
1107
- )
1108
- patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
1109
- lookup_expr="lte",
1110
- label="Max age (yrs)",
1111
- field_name="patientstudymoduleattr__patient_age_decimal",
1112
- )
1113
- patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
1114
- lookup_expr="gte",
1115
- label="Min weight (kg)",
1116
- field_name="patientstudymoduleattr__patient_weight",
1117
- )
1118
- patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
1119
- lookup_expr="lte",
1120
- label="Max weight (kg)",
1121
- field_name="patientstudymoduleattr__patient_weight",
1122
- )
1123
- generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
1124
- lookup_expr="icontains", label="Hospital"
1125
- )
1126
- generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
1127
- lookup_expr="icontains", label="Make"
1128
- )
1129
- generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
1130
- lookup_expr="icontains", label="Model"
1131
- )
1132
- generalequipmentmoduleattr__station_name = django_filters.CharFilter(
1133
- lookup_expr="icontains", label="Station name"
1134
- )
1135
- accession_number = django_filters.CharFilter(
1136
- method=_custom_acc_filter, label="Accession number"
1137
- )
1138
- radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_gte = django_filters.NumberFilter(
1139
- lookup_expr="gte",
1140
- label="Min administered dose (MBq)",
1141
- field_name="radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity",
1142
- )
1143
- radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_lte = django_filters.NumberFilter(
1144
- lookup_expr="lte",
1145
- label="Max administered dose (MBq)",
1146
- field_name="radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity",
1147
- )
1148
- generalequipmentmoduleattr__unique_equipment_name__display_name = (
1149
- django_filters.CharFilter(lookup_expr="icontains", label="Display name")
1150
- )
1151
- test_data = django_filters.ChoiceFilter(
1152
- lookup_expr="isnull",
1153
- label="Include possible test data",
1154
- field_name="patientmoduleattr__not_patient_indicator",
1155
- choices=TEST_CHOICES,
1156
- widget=forms.Select,
1157
- )
1158
-
1159
- class Meta:
1160
- """
1161
- Lists fields and order-by information for django-filter filtering
1162
- """
1163
-
1164
- model = GeneralStudyModuleAttr
1165
- fields = [
1166
- "study_date__gt",
1167
- "study_date__lt",
1168
- "study_description",
1169
- "procedure_code_meaning",
1170
- "requested_procedure_code_meaning",
1171
- "generalequipmentmoduleattr__institution_name",
1172
- "generalequipmentmoduleattr__manufacturer",
1173
- "generalequipmentmoduleattr__manufacturer_model_name",
1174
- "generalequipmentmoduleattr__station_name",
1175
- "patientstudymoduleattr__patient_age_decimal__gte",
1176
- "patientstudymoduleattr__patient_age_decimal__lte",
1177
- "patientstudymoduleattr__patient_weight__gte",
1178
- "patientstudymoduleattr__patient_weight__lte",
1179
- "accession_number",
1180
- "radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_gte",
1181
- "radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_lte",
1182
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
1183
- "test_data",
1184
- ]
1185
-
1186
- o = DateTimeOrderingFilter(
1187
- choices=(
1188
- ("study_description", "Study Description"),
1189
- ("generalequipmentmoduleattr__institution_name", "Hospital"),
1190
- ("generalequipmentmoduleattr__manufacturer", "Make"),
1191
- ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
1192
- (
1193
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
1194
- "Display name",
1195
- ),
1196
- ("study_description", "Study description"),
1197
- ),
1198
- fields=(
1199
- ("study_description", "study_description"),
1200
- (
1201
- "generalequipmentmoduleattr__institution_name",
1202
- "generalequipmentmoduleattr__institution_name",
1203
- ),
1204
- (
1205
- "generalequipmentmoduleattr__manufacturer",
1206
- "generalequipmentmoduleattr__manufacturer",
1207
- ),
1208
- (
1209
- "generalequipmentmoduleattr__manufacturer_model_name",
1210
- "generalequipmentmoduleattr__manufacturer_model_name",
1211
- ),
1212
- (
1213
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
1214
- "generalequipmentmoduleattr__unique_equipment_name__display_name",
1215
- ),
1216
- ("study_description", "study_description"),
1217
- ),
1218
- )
1219
-
1220
-
1221
- class NMFilterPlusPid(NMSummaryListFilter):
1222
-
1223
- """Adding patient name and ID to filter if permissions allow"""
1224
-
1225
- def __init__(self, *args, **kwargs):
1226
- super(NMFilterPlusPid, self).__init__(*args, **kwargs)
1227
- self.filters["patient_name"] = django_filters.CharFilter(
1228
- method=custom_name_filter, label="Patient name"
1229
- )
1230
- self.filters["patient_id"] = django_filters.CharFilter(
1231
- method=custom_id_filter, label="Patient ID"
1232
- )
1233
-
1234
-
1235
- def nm_filter(filters, pid=False):
1236
- studies = GeneralStudyModuleAttr.objects.filter(modality_type__exact="NM")
1237
- if pid:
1238
- return NMFilterPlusPid(
1239
- filters, studies.order_by("-study_date", "-study_time").distinct()
1240
- )
1241
- return NMSummaryListFilter(
1242
- filters, studies.order_by("-study_date", "-study_time").distinct()
1243
- )
1
+ # pylint: disable=line-too-long, too-many-lines
2
+ # OpenREM - Radiation Exposure Monitoring tools for the physicist
3
+ # Copyright (C) 2012,2013 The Royal Marsden NHS Foundation Trust
4
+ #
5
+ # This program is free software: you can redistribute it and/or modify
6
+ # it under the terms of the GNU General Public License as published by
7
+ # the Free Software Foundation, either version 3 of the License, or
8
+ # (at your option) any later version.
9
+ #
10
+ # This program is distributed in the hope that it will be useful,
11
+ # but WITHOUT ANY WARRANTY; without even the implied warranty of
12
+ # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
13
+ # GNU General Public License for more details.
14
+ #
15
+ # Additional permission under section 7 of GPLv3:
16
+ # You shall not make any use of the name of The Royal Marsden NHS
17
+ # Foundation trust in connection with this Program in any press or
18
+ # other public announcement without the prior written consent of
19
+ # The Royal Marsden NHS Foundation Trust.
20
+ #
21
+ # You should have received a copy of the GNU General Public License
22
+ # along with this program. If not, see <http://www.gnu.org/licenses/>.
23
+
24
+ """
25
+ .. module:: mod_filters.
26
+ :synopsis: Module for filtering studies on the summary filter pages.
27
+
28
+ .. moduleauthor:: Ed McDonagh
29
+
30
+ """
31
+
32
+ from decimal import Decimal, InvalidOperation
33
+ import logging
34
+
35
+ from django import forms
36
+ from django.db.models import Q
37
+ import django_filters
38
+
39
+ from remapp.models import GeneralStudyModuleAttr
40
+
41
+ from ..tools.hash_id import hash_id
42
+ from ..tools.check_standard_name_status import are_standard_names_enabled
43
+
44
+ logger = logging.getLogger(__name__)
45
+
46
+ TEST_CHOICES = (("", "Yes (default)"), (2, "No (caution)"))
47
+
48
+
49
+ def custom_name_filter(queryset, name, value):
50
+ """Search for name as plain text and encrypted"""
51
+ if not value:
52
+ return queryset
53
+ filtered = queryset.filter(
54
+ (
55
+ Q(patientmoduleattr__name_hashed=False)
56
+ & Q(patientmoduleattr__patient_name__icontains=value)
57
+ )
58
+ | (
59
+ Q(patientmoduleattr__name_hashed=True)
60
+ & Q(patientmoduleattr__patient_name=hash_id(value))
61
+ )
62
+ )
63
+ return filtered
64
+
65
+
66
+ def custom_id_filter(queryset, name, value):
67
+ """Search for ID as plain text and encrypted"""
68
+ if not value:
69
+ return queryset
70
+ filtered = queryset.filter(
71
+ (
72
+ Q(patientmoduleattr__id_hashed=False)
73
+ & Q(patientmoduleattr__patient_id__icontains=value)
74
+ )
75
+ | (
76
+ Q(patientmoduleattr__id_hashed=True)
77
+ & Q(patientmoduleattr__patient_id=hash_id(value))
78
+ )
79
+ )
80
+ return filtered
81
+
82
+
83
+ def _custom_acc_filter(queryset, name, value):
84
+ """Search for accession number as plain text and encrypted"""
85
+ if not value:
86
+ return queryset
87
+ filtered = queryset.filter(
88
+ (Q(accession_hashed=False) & Q(accession_number__icontains=value))
89
+ | (Q(accession_hashed=True) & Q(accession_number=hash_id(value)))
90
+ )
91
+ return filtered
92
+
93
+
94
+ def _dap_filter(queryset, name, value):
95
+ """Modify DAP to Gy.m2 before filtering"""
96
+ if not value or not name:
97
+ return queryset
98
+ try:
99
+ value_gy_m2 = Decimal(value) / Decimal(1000000)
100
+ except InvalidOperation:
101
+ return queryset
102
+ if "study_dap_min" in name:
103
+ filtered = queryset.filter(total_dap__gte=value_gy_m2)
104
+ elif "study_dap_max" in name:
105
+ filtered = queryset.filter(total_dap__lte=value_gy_m2)
106
+ elif "event_dap_min" in name:
107
+ filtered = queryset.filter(
108
+ projectionxrayradiationdose__irradeventxraydata__dose_area_product__gte=value_gy_m2
109
+ )
110
+ elif "event_dap_max" in name:
111
+ filtered = queryset.filter(
112
+ projectionxrayradiationdose__irradeventxraydata__dose_area_product__lte=value_gy_m2
113
+ )
114
+ else:
115
+ return queryset
116
+ return filtered
117
+
118
+
119
+ class DateTimeOrderingFilter(django_filters.OrderingFilter):
120
+ """Custom filter to order by date and time as they are two separate fields"""
121
+
122
+ def __init__(self, *args, **kwargs):
123
+ super(DateTimeOrderingFilter, self).__init__(*args, **kwargs)
124
+ self.extra["choices"] += (
125
+ ("-time_date", "Exam date "),
126
+ ("time_date", "Exam date ⬆"),
127
+ )
128
+
129
+ def filter(self, qs, value):
130
+ """Sets order_by to date then time and returns queryset
131
+
132
+ :param qs: queryset
133
+ :param value: list containing ordering type as string
134
+ :return: ordered queryset
135
+ """
136
+ # OrderingFilter is CSV-based, so `value` is a list
137
+ if value and any(v in ["time_date", "-time_date"] for v in value):
138
+ if "-time_date" in value:
139
+ return qs.order_by("-study_date", "-study_time")
140
+ if "time_date" in value:
141
+ return qs.order_by("study_date", "study_time")
142
+
143
+ return super(DateTimeOrderingFilter, self).filter(qs, value)
144
+
145
+
146
+ class RFSummaryListFilter(django_filters.FilterSet):
147
+ """Filter for fluoroscopy studies to display in web interface."""
148
+
149
+ study_date__gt = django_filters.DateFilter(
150
+ lookup_expr="gte",
151
+ label="Date from",
152
+ field_name="study_date",
153
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
154
+ )
155
+ study_date__lt = django_filters.DateFilter(
156
+ lookup_expr="lte",
157
+ label="Date until",
158
+ field_name="study_date",
159
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
160
+ )
161
+ study_description = django_filters.CharFilter(
162
+ lookup_expr="icontains", label="Study description"
163
+ )
164
+ procedure_code_meaning = django_filters.CharFilter(
165
+ lookup_expr="icontains", label="Procedure"
166
+ )
167
+ requested_procedure_code_meaning = django_filters.CharFilter(
168
+ lookup_expr="icontains", label="Requested procedure"
169
+ )
170
+ projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
171
+ django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
172
+ )
173
+ patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
174
+ lookup_expr="gte",
175
+ label="Min age (yrs)",
176
+ field_name="patientstudymoduleattr__patient_age_decimal",
177
+ )
178
+ patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
179
+ lookup_expr="lte",
180
+ label="Max age (yrs)",
181
+ field_name="patientstudymoduleattr__patient_age_decimal",
182
+ )
183
+ patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
184
+ lookup_expr="gte",
185
+ label="Min weight (kg)",
186
+ field_name="patientstudymoduleattr__patient_weight",
187
+ )
188
+ patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
189
+ lookup_expr="lte",
190
+ label="Max weight (kg)",
191
+ field_name="patientstudymoduleattr__patient_weight",
192
+ )
193
+ generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
194
+ lookup_expr="icontains", label="Hospital"
195
+ )
196
+ generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
197
+ lookup_expr="icontains", label="Make"
198
+ )
199
+ generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
200
+ lookup_expr="icontains", label="Model"
201
+ )
202
+ generalequipmentmoduleattr__station_name = django_filters.CharFilter(
203
+ lookup_expr="icontains", label="Station name"
204
+ )
205
+ performing_physician_name = django_filters.CharFilter(
206
+ lookup_expr="icontains", label="Physician"
207
+ )
208
+ accession_number = django_filters.CharFilter(
209
+ method=_custom_acc_filter, label="Accession number"
210
+ )
211
+ study_dap_min = django_filters.NumberFilter(
212
+ method=_dap_filter, label="Min study DAP (cGy·cm²)"
213
+ )
214
+ study_dap_max = django_filters.NumberFilter(
215
+ method=_dap_filter, label="Max study DAP (cGy·cm²)"
216
+ )
217
+ generalequipmentmoduleattr__unique_equipment_name__display_name = (
218
+ django_filters.CharFilter(lookup_expr="icontains", label="Display name")
219
+ )
220
+ test_data = django_filters.ChoiceFilter(
221
+ lookup_expr="isnull",
222
+ label="Include possible test data",
223
+ field_name="patientmoduleattr__not_patient_indicator",
224
+ choices=TEST_CHOICES,
225
+ widget=forms.Select,
226
+ )
227
+
228
+ class Meta:
229
+ """
230
+ Lists fields and order-by information for django-filter filtering
231
+ """
232
+
233
+ model = GeneralStudyModuleAttr
234
+ fields = [
235
+ "study_date__gt",
236
+ "study_date__lt",
237
+ "study_description",
238
+ "procedure_code_meaning",
239
+ "requested_procedure_code_meaning",
240
+ "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
241
+ "generalequipmentmoduleattr__institution_name",
242
+ "generalequipmentmoduleattr__manufacturer",
243
+ "generalequipmentmoduleattr__manufacturer_model_name",
244
+ "generalequipmentmoduleattr__station_name",
245
+ "patientstudymoduleattr__patient_age_decimal__gte",
246
+ "patientstudymoduleattr__patient_age_decimal__lte",
247
+ "patientstudymoduleattr__patient_weight__gte",
248
+ "patientstudymoduleattr__patient_weight__lte",
249
+ "performing_physician_name",
250
+ "accession_number",
251
+ "study_dap_min",
252
+ "study_dap_max",
253
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
254
+ "test_data",
255
+ ]
256
+
257
+ o = DateTimeOrderingFilter(
258
+ choices=(
259
+ ("study_description", "Study Description"),
260
+ ("generalequipmentmoduleattr__institution_name", "Hospital"),
261
+ ("generalequipmentmoduleattr__manufacturer", "Make"),
262
+ ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
263
+ (
264
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
265
+ "Display name",
266
+ ),
267
+ ("study_description", "Study description"),
268
+ ("-total_dap", "Total DAP"),
269
+ ("-total_rp_dose_a", "Total RP Dose (A)"),
270
+ ),
271
+ fields=(
272
+ ("study_description", "study_description"),
273
+ (
274
+ "generalequipmentmoduleattr__institution_name",
275
+ "generalequipmentmoduleattr__institution_name",
276
+ ),
277
+ (
278
+ "generalequipmentmoduleattr__manufacturer",
279
+ "generalequipmentmoduleattr__manufacturer",
280
+ ),
281
+ (
282
+ "generalequipmentmoduleattr__manufacturer_model_name",
283
+ "generalequipmentmoduleattr__manufacturer_model_name",
284
+ ),
285
+ (
286
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
287
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
288
+ ),
289
+ ("study_description", "study_description"),
290
+ ("total_dap", "-total_dap"),
291
+ ("total_rp_dose_a", "-total_rp_dose_a"),
292
+ ),
293
+ )
294
+
295
+
296
+ class RFFilterPlusStdNames(RFSummaryListFilter):
297
+ """Adding standard name fields"""
298
+
299
+ standard_names__standard_name = django_filters.CharFilter(
300
+ lookup_expr="icontains",
301
+ label="Standard study name",
302
+ )
303
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
304
+ lookup_expr="icontains", label="Standard acquisition name"
305
+ )
306
+
307
+
308
+ class RFFilterPlusPid(RFSummaryListFilter):
309
+ """Adding patient name and ID to filter if permissions allow"""
310
+
311
+ def __init__(self, *args, **kwargs):
312
+ super(RFFilterPlusPid, self).__init__(*args, **kwargs)
313
+ self.filters["patient_name"] = django_filters.CharFilter(
314
+ method=custom_name_filter, label="Patient name"
315
+ )
316
+ self.filters["patient_id"] = django_filters.CharFilter(
317
+ method=custom_id_filter, label="Patient ID"
318
+ )
319
+
320
+
321
+ class RFFilterPlusPidPlusStdNames(RFFilterPlusPid):
322
+ """Adding standard name fields"""
323
+
324
+ standard_names__standard_name = django_filters.CharFilter(
325
+ lookup_expr="icontains",
326
+ label="Standard study name",
327
+ )
328
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
329
+ lookup_expr="icontains", label="Standard acquisition name"
330
+ )
331
+
332
+
333
+ EVENT_NUMBER_CHOICES = (
334
+ (None, "Any"),
335
+ (0, "None"),
336
+ ("some", ">0"),
337
+ (1, "1"),
338
+ (2, "2"),
339
+ (3, "3"),
340
+ (4, "4"),
341
+ (5, "5"),
342
+ (6, "6"),
343
+ (7, "7"),
344
+ (8, "8"),
345
+ (9, "9"),
346
+ (10, "10"),
347
+ ("more", ">10"),
348
+ )
349
+
350
+
351
+ def _specify_event_numbers(queryset, name, value):
352
+ """Method filter for specifying number of events in each study
353
+
354
+ :param queryset: Study list
355
+ :param name: field name (not used)
356
+ :param value: number of events
357
+ :return: filtered queryset
358
+ """
359
+ try:
360
+ value = int(value)
361
+ except ValueError:
362
+ if value == "more":
363
+ min_value = 10
364
+ elif value == "some":
365
+ min_value = 0
366
+ else:
367
+ return queryset
368
+ if "num_events" in name:
369
+ filtered = queryset.filter(number_of_events__gt=min_value)
370
+ elif "num_spiral_events" in name:
371
+ filtered = queryset.filter(number_of_spiral__gt=min_value)
372
+ elif "num_axial_events" in name:
373
+ filtered = queryset.filter(number_of_axial__gt=min_value)
374
+ elif "num_spr_events" in name:
375
+ filtered = queryset.filter(number_of_const_angle__gt=min_value)
376
+ elif "num_stationary_events" in name:
377
+ filtered = queryset.filter(number_of_stationary__gt=min_value)
378
+ else:
379
+ return queryset
380
+ return filtered
381
+ if "num_events" in name:
382
+ filtered = queryset.filter(number_of_events=value)
383
+ elif "num_spiral_events" in name:
384
+ filtered = queryset.filter(number_of_spiral=value)
385
+ elif "num_axial_events" in name:
386
+ filtered = queryset.filter(number_of_axial=value)
387
+ elif "num_spr_events" in name:
388
+ filtered = queryset.filter(number_of_const_angle=value)
389
+ elif "num_stationary_events" in name:
390
+ filtered = queryset.filter(number_of_stationary=value)
391
+ else:
392
+ return queryset
393
+ return filtered
394
+
395
+
396
+ class CTSummaryListFilter(django_filters.FilterSet):
397
+ """Filter for CT studies to display in web interface."""
398
+
399
+ study_date__gt = django_filters.DateFilter(
400
+ lookup_expr="gte",
401
+ label="Date from",
402
+ field_name="study_date",
403
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
404
+ )
405
+ study_date__lt = django_filters.DateFilter(
406
+ lookup_expr="lte",
407
+ label="Date until",
408
+ field_name="study_date",
409
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
410
+ )
411
+ study_description = django_filters.CharFilter(
412
+ lookup_expr="icontains", label="Study description"
413
+ )
414
+ procedure_code_meaning = django_filters.CharFilter(
415
+ lookup_expr="icontains", label="Procedure"
416
+ )
417
+ requested_procedure_code_meaning = django_filters.CharFilter(
418
+ lookup_expr="icontains", label="Requested procedure"
419
+ )
420
+ ctradiationdose__ctirradiationeventdata__acquisition_protocol = (
421
+ django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
422
+ )
423
+ patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
424
+ lookup_expr="gte",
425
+ label="Min age (yrs)",
426
+ field_name="patientstudymoduleattr__patient_age_decimal",
427
+ )
428
+ patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
429
+ lookup_expr="lte",
430
+ label="Max age (yrs)",
431
+ field_name="patientstudymoduleattr__patient_age_decimal",
432
+ )
433
+ patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
434
+ lookup_expr="gte",
435
+ label="Min weight (kg)",
436
+ field_name="patientstudymoduleattr__patient_weight",
437
+ )
438
+ patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
439
+ lookup_expr="lte",
440
+ label="Max weight (kg)",
441
+ field_name="patientstudymoduleattr__patient_weight",
442
+ )
443
+ generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
444
+ lookup_expr="icontains", label="Hospital"
445
+ )
446
+ generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
447
+ lookup_expr="icontains", label="Make"
448
+ )
449
+ generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
450
+ lookup_expr="icontains", label="Model"
451
+ )
452
+ generalequipmentmoduleattr__station_name = django_filters.CharFilter(
453
+ lookup_expr="icontains", label="Station name"
454
+ )
455
+ accession_number = django_filters.CharFilter(
456
+ method=_custom_acc_filter, label="Accession number"
457
+ )
458
+ total_dlp__gte = django_filters.NumberFilter(
459
+ lookup_expr="gte", field_name="total_dlp", label="Min study DLP"
460
+ )
461
+ total_dlp__lte = django_filters.NumberFilter(
462
+ lookup_expr="lte", field_name="total_dlp", label="Max study DLP"
463
+ )
464
+ generalequipmentmoduleattr__unique_equipment_name__display_name = (
465
+ django_filters.CharFilter(lookup_expr="icontains", label="Display name")
466
+ )
467
+ test_data = django_filters.ChoiceFilter(
468
+ lookup_expr="isnull",
469
+ label="Include possible test data",
470
+ field_name="patientmoduleattr__not_patient_indicator",
471
+ choices=TEST_CHOICES,
472
+ widget=forms.Select,
473
+ )
474
+ num_events = django_filters.ChoiceFilter(
475
+ method=_specify_event_numbers,
476
+ label="Num. events total",
477
+ choices=EVENT_NUMBER_CHOICES,
478
+ widget=forms.Select,
479
+ )
480
+ num_spiral_events = django_filters.ChoiceFilter(
481
+ method=_specify_event_numbers,
482
+ label="Num. spiral events",
483
+ choices=EVENT_NUMBER_CHOICES,
484
+ widget=forms.Select,
485
+ )
486
+ num_axial_events = django_filters.ChoiceFilter(
487
+ method=_specify_event_numbers,
488
+ label="Num. axial events",
489
+ choices=EVENT_NUMBER_CHOICES,
490
+ widget=forms.Select,
491
+ )
492
+ num_spr_events = django_filters.ChoiceFilter(
493
+ method=_specify_event_numbers,
494
+ label="Num. localisers",
495
+ choices=EVENT_NUMBER_CHOICES,
496
+ widget=forms.Select,
497
+ )
498
+ num_stationary_events = django_filters.ChoiceFilter(
499
+ method=_specify_event_numbers,
500
+ label="Num. stationary events",
501
+ choices=EVENT_NUMBER_CHOICES,
502
+ widget=forms.Select,
503
+ )
504
+
505
+ class Meta:
506
+ """
507
+ Lists fields and order-by information for django-filter filtering
508
+ """
509
+
510
+ model = GeneralStudyModuleAttr
511
+ fields = [
512
+ "study_date__gt",
513
+ "study_date__lt",
514
+ "study_description",
515
+ "procedure_code_meaning",
516
+ "requested_procedure_code_meaning",
517
+ "ctradiationdose__ctirradiationeventdata__acquisition_protocol",
518
+ "generalequipmentmoduleattr__institution_name",
519
+ "generalequipmentmoduleattr__manufacturer",
520
+ "generalequipmentmoduleattr__manufacturer_model_name",
521
+ "generalequipmentmoduleattr__station_name",
522
+ "patientstudymoduleattr__patient_age_decimal__gte",
523
+ "patientstudymoduleattr__patient_age_decimal__lte",
524
+ "patientstudymoduleattr__patient_weight__gte",
525
+ "patientstudymoduleattr__patient_weight__lte",
526
+ "accession_number",
527
+ "total_dlp__gte",
528
+ "total_dlp__lte",
529
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
530
+ "test_data",
531
+ "num_events",
532
+ "num_spiral_events",
533
+ "num_axial_events",
534
+ "num_spr_events",
535
+ "num_stationary_events",
536
+ ]
537
+
538
+ o = DateTimeOrderingFilter(
539
+ choices=(
540
+ ("study_description", "Study Description"),
541
+ ("generalequipmentmoduleattr__institution_name", "Hospital"),
542
+ ("generalequipmentmoduleattr__manufacturer", "Make"),
543
+ ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
544
+ (
545
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
546
+ "Display name",
547
+ ),
548
+ ("study_description", "Study description"),
549
+ ("-total_dlp", "Total DLP"),
550
+ ),
551
+ fields=(
552
+ ("study_description", "study_description"),
553
+ (
554
+ "generalequipmentmoduleattr__institution_name",
555
+ "generalequipmentmoduleattr__institution_name",
556
+ ),
557
+ (
558
+ "generalequipmentmoduleattr__manufacturer",
559
+ "generalequipmentmoduleattr__manufacturer",
560
+ ),
561
+ (
562
+ "generalequipmentmoduleattr__manufacturer_model_name",
563
+ "generalequipmentmoduleattr__manufacturer_model_name",
564
+ ),
565
+ (
566
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
567
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
568
+ ),
569
+ ("study_description", "study_description"),
570
+ ("total_dlp", "-total_dlp"),
571
+ ),
572
+ )
573
+
574
+
575
+ class CTFilterPlusStdNames(CTSummaryListFilter):
576
+ """Adding standard name fields"""
577
+
578
+ standard_names__standard_name = django_filters.CharFilter(
579
+ lookup_expr="icontains", label="Standard study name"
580
+ )
581
+ ctradiationdose__ctirradiationeventdata__standard_protocols__standard_name = (
582
+ django_filters.CharFilter(
583
+ lookup_expr="icontains", label="Standard acquisition name"
584
+ )
585
+ )
586
+
587
+
588
+ class CTFilterPlusPid(CTSummaryListFilter):
589
+ """Adding patient name and ID to filter if permissions allow"""
590
+
591
+ def __init__(self, *args, **kwargs):
592
+ super(CTFilterPlusPid, self).__init__(*args, **kwargs)
593
+ self.filters["patient_name"] = django_filters.CharFilter(
594
+ method=custom_name_filter, label="Patient name"
595
+ )
596
+ self.filters["patient_id"] = django_filters.CharFilter(
597
+ method=custom_id_filter, label="Patient ID"
598
+ )
599
+
600
+
601
+ class CTFilterPlusPidPlusStdNames(CTFilterPlusPid):
602
+ """Adding standard name fields"""
603
+
604
+ standard_names__standard_name = django_filters.CharFilter(
605
+ lookup_expr="icontains", label="Standard study name"
606
+ )
607
+ ctradiationdose__ctirradiationeventdata__standard_protocols__standard_name = (
608
+ django_filters.CharFilter(
609
+ lookup_expr="icontains", label="Standard acquisition name"
610
+ )
611
+ )
612
+
613
+
614
+ def ct_acq_filter(filters, pid=False):
615
+
616
+ # Obtain the system-level enable_standard_names setting
617
+ enable_standard_names = are_standard_names_enabled()
618
+
619
+ studies = GeneralStudyModuleAttr.objects.filter(modality_type="CT")
620
+
621
+ if pid:
622
+ if enable_standard_names:
623
+ return CTFilterPlusPidPlusStdNames(
624
+ filters, studies.order_by("-study_date", "-study_time").distinct()
625
+ )
626
+ else:
627
+ return CTFilterPlusPid(
628
+ filters, studies.order_by("-study_date", "-study_time").distinct()
629
+ )
630
+ if enable_standard_names:
631
+ return CTFilterPlusStdNames(
632
+ filters, studies.order_by("-study_date", "-study_time").distinct()
633
+ )
634
+ else:
635
+ return CTSummaryListFilter(
636
+ filters, studies.order_by("-study_date", "-study_time").distinct()
637
+ )
638
+
639
+
640
+ class MGSummaryListFilter(django_filters.FilterSet):
641
+ """Filter for mammography studies to display in web interface."""
642
+
643
+ study_date__gt = django_filters.DateFilter(
644
+ lookup_expr="gte",
645
+ label="Date from",
646
+ field_name="study_date",
647
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
648
+ )
649
+ study_date__lt = django_filters.DateFilter(
650
+ lookup_expr="lte",
651
+ label="Date until",
652
+ field_name="study_date",
653
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
654
+ )
655
+ study_description = django_filters.CharFilter(
656
+ lookup_expr="icontains", label="Study description"
657
+ )
658
+ procedure_code_meaning = django_filters.CharFilter(
659
+ lookup_expr="icontains", label="Procedure"
660
+ )
661
+ requested_procedure_code_meaning = django_filters.CharFilter(
662
+ lookup_expr="icontains", label="Requested procedure"
663
+ )
664
+ projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
665
+ django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
666
+ )
667
+ projectionxrayradiationdose__irradeventxraydata__image_view__code_meaning = (
668
+ django_filters.CharFilter(lookup_expr="icontains", label="View code")
669
+ )
670
+ projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness__range = django_filters.NumericRangeFilter(
671
+ lookup_expr="range",
672
+ label="Breast thickness range (mm)",
673
+ field_name="projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness",
674
+ )
675
+ projectionxrayradiationdose__irradeventxraydata__irradeventxraysourcedata__exposure_control_mode = django_filters.CharFilter(
676
+ lookup_expr="icontains", label="Exposure control mode"
677
+ )
678
+ patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
679
+ lookup_expr="gte",
680
+ label="Min age (yrs)",
681
+ field_name="patientstudymoduleattr__patient_age_decimal",
682
+ )
683
+ patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
684
+ lookup_expr="lte",
685
+ label="Max age (yrs)",
686
+ field_name="patientstudymoduleattr__patient_age_decimal",
687
+ )
688
+ generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
689
+ lookup_expr="icontains", label="Hospital"
690
+ )
691
+ generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
692
+ lookup_expr="icontains", label="Make"
693
+ )
694
+ generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
695
+ lookup_expr="icontains", label="Model"
696
+ )
697
+ generalequipmentmoduleattr__station_name = django_filters.CharFilter(
698
+ lookup_expr="icontains", label="Station name"
699
+ )
700
+ accession_number = django_filters.CharFilter(
701
+ method=_custom_acc_filter, label="Accession number"
702
+ )
703
+ generalequipmentmoduleattr__unique_equipment_name__display_name = (
704
+ django_filters.CharFilter(lookup_expr="icontains", label="Display name")
705
+ )
706
+ num_events = django_filters.ChoiceFilter(
707
+ method=_specify_event_numbers,
708
+ label="Num. events total",
709
+ choices=EVENT_NUMBER_CHOICES,
710
+ widget=forms.Select,
711
+ )
712
+ test_data = django_filters.ChoiceFilter(
713
+ lookup_expr="isnull",
714
+ label="Include possible test data",
715
+ field_name="patientmoduleattr__not_patient_indicator",
716
+ choices=TEST_CHOICES,
717
+ widget=forms.Select,
718
+ )
719
+
720
+ class Meta:
721
+ """
722
+ Lists fields and order-by information for django-filter filtering
723
+ """
724
+
725
+ model = GeneralStudyModuleAttr
726
+ fields = [
727
+ "study_date__gt",
728
+ "study_date__lt",
729
+ "study_description",
730
+ "procedure_code_meaning",
731
+ "requested_procedure_code_meaning",
732
+ "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
733
+ "projectionxrayradiationdose__irradeventxraydata__image_view__code_meaning",
734
+ "projectionxrayradiationdose__irradeventxraydata__irradeventxraymechanicaldata__compression_thickness__range",
735
+ "projectionxrayradiationdose__irradeventxraydata__irradeventxraysourcedata__exposure_control_mode",
736
+ "generalequipmentmoduleattr__institution_name",
737
+ "generalequipmentmoduleattr__manufacturer",
738
+ "generalequipmentmoduleattr__manufacturer_model_name",
739
+ "generalequipmentmoduleattr__station_name",
740
+ "patientstudymoduleattr__patient_age_decimal__gte",
741
+ "patientstudymoduleattr__patient_age_decimal__lte",
742
+ "accession_number",
743
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
744
+ "num_events",
745
+ "test_data",
746
+ ]
747
+
748
+ o = DateTimeOrderingFilter(
749
+ choices=(
750
+ ("study_description", "Study Description"),
751
+ ("generalequipmentmoduleattr__institution_name", "Hospital"),
752
+ ("generalequipmentmoduleattr__manufacturer", "Make"),
753
+ ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
754
+ (
755
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
756
+ "Display name",
757
+ ),
758
+ ("study_description", "Study description"),
759
+ ("procedure_code_meaning", "Procedure"),
760
+ ("-total_agd_left", "AGD (left)"),
761
+ ("-total_agd_right", "AGD (right)"),
762
+ ),
763
+ fields=(
764
+ ("study_description", "study_description"),
765
+ (
766
+ "generalequipmentmoduleattr__institution_name",
767
+ "generalequipmentmoduleattr__institution_name",
768
+ ),
769
+ (
770
+ "generalequipmentmoduleattr__manufacturer",
771
+ "generalequipmentmoduleattr__manufacturer",
772
+ ),
773
+ (
774
+ "generalequipmentmoduleattr__manufacturer_model_name",
775
+ "generalequipmentmoduleattr__manufacturer_model_name",
776
+ ),
777
+ (
778
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
779
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
780
+ ),
781
+ ("study_description", "study_description"),
782
+ ("procedure_doce_meaning", "procedure_code_menaing"),
783
+ ("total_agd_left", "-total_agd_left"),
784
+ ("total_agd_right", "-total_agd_right"),
785
+ ),
786
+ )
787
+
788
+
789
+ class MGFilterPlusStdNames(MGSummaryListFilter):
790
+ """Adding standard name fields"""
791
+
792
+ standard_names__standard_name = django_filters.CharFilter(
793
+ lookup_expr="icontains",
794
+ label="Standard study name",
795
+ )
796
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
797
+ lookup_expr="icontains", label="Standard acquisition name"
798
+ )
799
+
800
+
801
+ class MGFilterPlusPid(MGSummaryListFilter):
802
+ """Adding patient name and ID to filter if permissions allow"""
803
+
804
+ def __init__(self, *args, **kwargs):
805
+ super(MGFilterPlusPid, self).__init__(*args, **kwargs)
806
+ self.filters["patient_name"] = django_filters.CharFilter(
807
+ method=custom_name_filter, label="Patient name"
808
+ )
809
+ self.filters["patient_id"] = django_filters.CharFilter(
810
+ method=custom_id_filter, label="Patient ID"
811
+ )
812
+
813
+
814
+ class MGFilterPlusPidPlusStdNames(MGFilterPlusPid):
815
+ """Adding standard name fields"""
816
+
817
+ standard_names__standard_name = django_filters.CharFilter(
818
+ lookup_expr="icontains",
819
+ label="Standard study name",
820
+ )
821
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
822
+ lookup_expr="icontains", label="Standard acquisition name"
823
+ )
824
+
825
+
826
+ def mg_acq_filter(filters, pid=False):
827
+
828
+ # Obtain the system-level enable_standard_names setting
829
+ enable_standard_names = are_standard_names_enabled()
830
+
831
+ studies = GeneralStudyModuleAttr.objects.filter(modality_type="MG")
832
+
833
+ if pid:
834
+ if enable_standard_names:
835
+ return MGFilterPlusPidPlusStdNames(
836
+ filters, studies.order_by("-study_date", "-study_time").distinct()
837
+ )
838
+ else:
839
+ return MGFilterPlusPid(
840
+ filters, studies.order_by("-study_date", "-study_time").distinct()
841
+ )
842
+ if enable_standard_names:
843
+ return MGFilterPlusStdNames(
844
+ filters, studies.order_by("-study_date", "-study_time").distinct()
845
+ )
846
+ else:
847
+ return MGSummaryListFilter(
848
+ filters, studies.order_by("-study_date", "-study_time").distinct()
849
+ )
850
+
851
+
852
+ class DXSummaryListFilter(django_filters.FilterSet):
853
+ """Filter for DX studies to display in web interface."""
854
+
855
+ study_date__gt = django_filters.DateFilter(
856
+ lookup_expr="gte",
857
+ label="Date from",
858
+ field_name="study_date",
859
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
860
+ )
861
+ study_date__lt = django_filters.DateFilter(
862
+ lookup_expr="lte",
863
+ label="Date until",
864
+ field_name="study_date",
865
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
866
+ )
867
+ study_description = django_filters.CharFilter(
868
+ lookup_expr="icontains", label="Study description"
869
+ )
870
+ procedure_code_meaning = django_filters.CharFilter(
871
+ lookup_expr="icontains", label="Procedure"
872
+ )
873
+ requested_procedure_code_meaning = django_filters.CharFilter(
874
+ lookup_expr="icontains", label="Requested procedure"
875
+ )
876
+ projectionxrayradiationdose__irradeventxraydata__acquisition_protocol = (
877
+ django_filters.CharFilter(lookup_expr="icontains", label="Acquisition protocol")
878
+ )
879
+ patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
880
+ lookup_expr="gte",
881
+ label="Min age (yrs)",
882
+ field_name="patientstudymoduleattr__patient_age_decimal",
883
+ )
884
+ patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
885
+ lookup_expr="lte",
886
+ label="Max age (yrs)",
887
+ field_name="patientstudymoduleattr__patient_age_decimal",
888
+ )
889
+ patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
890
+ lookup_expr="gte",
891
+ label="Min weight (kg)",
892
+ field_name="patientstudymoduleattr__patient_weight",
893
+ )
894
+ patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
895
+ lookup_expr="lte",
896
+ label="Max weight (kg)",
897
+ field_name="patientstudymoduleattr__patient_weight",
898
+ )
899
+ generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
900
+ lookup_expr="icontains", label="Hospital"
901
+ )
902
+ generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
903
+ lookup_expr="icontains", label="Make"
904
+ )
905
+ generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
906
+ lookup_expr="icontains", label="Model"
907
+ )
908
+ generalequipmentmoduleattr__station_name = django_filters.CharFilter(
909
+ lookup_expr="icontains", label="Station name"
910
+ )
911
+ accession_number = django_filters.CharFilter(
912
+ method=_custom_acc_filter, label="Accession number"
913
+ )
914
+ study_dap_min = django_filters.NumberFilter(
915
+ method=_dap_filter, label="Min study DAP (cGy·cm²)"
916
+ )
917
+ study_dap_max = django_filters.NumberFilter(
918
+ method=_dap_filter, label="Max study DAP (cGy·cm²)"
919
+ )
920
+ event_dap_min = django_filters.NumberFilter(
921
+ method=_dap_filter, label="Min acquisition DAP (cGy·cm²)"
922
+ )
923
+ event_dap_max = django_filters.NumberFilter(
924
+ method=_dap_filter, label="Max acquisition DAP (cGy·cm²)"
925
+ )
926
+ generalequipmentmoduleattr__unique_equipment_name__display_name = (
927
+ django_filters.CharFilter(lookup_expr="icontains", label="Display name")
928
+ )
929
+ num_events = django_filters.ChoiceFilter(
930
+ method=_specify_event_numbers,
931
+ label="Num. events total",
932
+ choices=EVENT_NUMBER_CHOICES,
933
+ widget=forms.Select,
934
+ )
935
+ test_data = django_filters.ChoiceFilter(
936
+ lookup_expr="isnull",
937
+ label="Include possible test data",
938
+ field_name="patientmoduleattr__not_patient_indicator",
939
+ choices=TEST_CHOICES,
940
+ widget=forms.Select,
941
+ )
942
+
943
+ class Meta:
944
+ """
945
+ Lists fields and order-by information for django-filter filtering
946
+ """
947
+
948
+ model = GeneralStudyModuleAttr
949
+ fields = [
950
+ "study_date__gt",
951
+ "study_date__lt",
952
+ "study_description",
953
+ "procedure_code_meaning",
954
+ "requested_procedure_code_meaning",
955
+ "projectionxrayradiationdose__irradeventxraydata__acquisition_protocol",
956
+ "generalequipmentmoduleattr__institution_name",
957
+ "generalequipmentmoduleattr__manufacturer",
958
+ "generalequipmentmoduleattr__manufacturer_model_name",
959
+ "generalequipmentmoduleattr__station_name",
960
+ "patientstudymoduleattr__patient_age_decimal__gte",
961
+ "patientstudymoduleattr__patient_age_decimal__lte",
962
+ "patientstudymoduleattr__patient_weight__gte",
963
+ "patientstudymoduleattr__patient_weight__lte",
964
+ "accession_number",
965
+ "study_dap_min",
966
+ "study_dap_max",
967
+ "event_dap_min",
968
+ "event_dap_max",
969
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
970
+ "num_events",
971
+ "test_data",
972
+ ]
973
+
974
+ o = DateTimeOrderingFilter(
975
+ choices=(
976
+ ("study_description", "Study Description"),
977
+ ("generalequipmentmoduleattr__institution_name", "Hospital"),
978
+ ("generalequipmentmoduleattr__manufacturer", "Make"),
979
+ ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
980
+ (
981
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
982
+ "Display name",
983
+ ),
984
+ ("study_description", "Study description"),
985
+ ("-total_dap", "Total DAP"),
986
+ ),
987
+ fields=(
988
+ ("study_description", "study_description"),
989
+ (
990
+ "generalequipmentmoduleattr__institution_name",
991
+ "generalequipmentmoduleattr__institution_name",
992
+ ),
993
+ (
994
+ "generalequipmentmoduleattr__manufacturer",
995
+ "generalequipmentmoduleattr__manufacturer",
996
+ ),
997
+ (
998
+ "generalequipmentmoduleattr__manufacturer_model_name",
999
+ "generalequipmentmoduleattr__manufacturer_model_name",
1000
+ ),
1001
+ (
1002
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1003
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1004
+ ),
1005
+ ("study_description", "study_description"),
1006
+ ("total_dap", "-total_dap"),
1007
+ ),
1008
+ )
1009
+
1010
+
1011
+ class DXFilterPlusStdNames(DXSummaryListFilter):
1012
+ """Adding standard name fields"""
1013
+
1014
+ standard_names__standard_name = django_filters.CharFilter(
1015
+ lookup_expr="icontains", label="Standard study name"
1016
+ )
1017
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
1018
+ lookup_expr="icontains", label="Standard acquisition name"
1019
+ )
1020
+
1021
+
1022
+ class DXFilterPlusPid(DXSummaryListFilter):
1023
+ """Adding patient name and ID to filter if permissions allow"""
1024
+
1025
+ def __init__(self, *args, **kwargs):
1026
+ super(DXFilterPlusPid, self).__init__(*args, **kwargs)
1027
+ self.filters["patient_name"] = django_filters.CharFilter(
1028
+ method=custom_name_filter, label="Patient name"
1029
+ )
1030
+ self.filters["patient_id"] = django_filters.CharFilter(
1031
+ method=custom_id_filter, label="Patient ID"
1032
+ )
1033
+
1034
+
1035
+ class DXFilterPlusPidPlusStdNames(DXFilterPlusPid):
1036
+ """Adding standard name fields"""
1037
+
1038
+ standard_names__standard_name = django_filters.CharFilter(
1039
+ lookup_expr="icontains", label="Standard study name"
1040
+ )
1041
+ projectionxrayradiationdose__irradeventxraydata__standard_protocols__standard_name = django_filters.CharFilter(
1042
+ lookup_expr="icontains", label="Standard acquisition name"
1043
+ )
1044
+
1045
+
1046
+ def dx_acq_filter(filters, pid=False):
1047
+
1048
+ # Obtain the system-level enable_standard_names setting
1049
+ enable_standard_names = are_standard_names_enabled()
1050
+
1051
+ studies = GeneralStudyModuleAttr.objects.filter(
1052
+ Q(modality_type__in=["DX", "CR", "PX"])
1053
+ )
1054
+
1055
+ if pid:
1056
+ if enable_standard_names:
1057
+ return DXFilterPlusPidPlusStdNames(
1058
+ filters,
1059
+ queryset=studies.order_by("-study_date", "-study_time").distinct(),
1060
+ )
1061
+ else:
1062
+ return DXFilterPlusPid(
1063
+ filters,
1064
+ queryset=studies.order_by("-study_date", "-study_time").distinct(),
1065
+ )
1066
+ if enable_standard_names:
1067
+ return DXFilterPlusStdNames(
1068
+ filters, queryset=studies.order_by("-study_date", "-study_time").distinct()
1069
+ )
1070
+ else:
1071
+ return DXSummaryListFilter(
1072
+ filters, queryset=studies.order_by("-study_date", "-study_time").distinct()
1073
+ )
1074
+
1075
+
1076
+ class NMSummaryListFilter(django_filters.FilterSet):
1077
+ """
1078
+ Filter for NM studies to display in web interface.
1079
+ """
1080
+
1081
+ study_date__gt = django_filters.DateFilter(
1082
+ lookup_expr="gte",
1083
+ label="Date from",
1084
+ field_name="study_date",
1085
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
1086
+ )
1087
+ study_date__lt = django_filters.DateFilter(
1088
+ lookup_expr="lte",
1089
+ label="Date until",
1090
+ field_name="study_date",
1091
+ widget=forms.TextInput(attrs={"class": "datepicker"}),
1092
+ )
1093
+ study_description = django_filters.CharFilter(
1094
+ lookup_expr="icontains", label="Study description"
1095
+ )
1096
+ procedure_code_meaning = django_filters.CharFilter(
1097
+ lookup_expr="icontains", label="Procedure"
1098
+ )
1099
+ requested_procedure_code_meaning = django_filters.CharFilter(
1100
+ lookup_expr="icontains", label="Requested procedure"
1101
+ )
1102
+ patientstudymoduleattr__patient_age_decimal__gte = django_filters.NumberFilter(
1103
+ lookup_expr="gte",
1104
+ label="Min age (yrs)",
1105
+ field_name="patientstudymoduleattr__patient_age_decimal",
1106
+ )
1107
+ patientstudymoduleattr__patient_age_decimal__lte = django_filters.NumberFilter(
1108
+ lookup_expr="lte",
1109
+ label="Max age (yrs)",
1110
+ field_name="patientstudymoduleattr__patient_age_decimal",
1111
+ )
1112
+ patientstudymoduleattr__patient_weight__gte = django_filters.NumberFilter(
1113
+ lookup_expr="gte",
1114
+ label="Min weight (kg)",
1115
+ field_name="patientstudymoduleattr__patient_weight",
1116
+ )
1117
+ patientstudymoduleattr__patient_weight__lte = django_filters.NumberFilter(
1118
+ lookup_expr="lte",
1119
+ label="Max weight (kg)",
1120
+ field_name="patientstudymoduleattr__patient_weight",
1121
+ )
1122
+ generalequipmentmoduleattr__institution_name = django_filters.CharFilter(
1123
+ lookup_expr="icontains", label="Hospital"
1124
+ )
1125
+ generalequipmentmoduleattr__manufacturer = django_filters.CharFilter(
1126
+ lookup_expr="icontains", label="Make"
1127
+ )
1128
+ generalequipmentmoduleattr__manufacturer_model_name = django_filters.CharFilter(
1129
+ lookup_expr="icontains", label="Model"
1130
+ )
1131
+ generalequipmentmoduleattr__station_name = django_filters.CharFilter(
1132
+ lookup_expr="icontains", label="Station name"
1133
+ )
1134
+ accession_number = django_filters.CharFilter(
1135
+ method=_custom_acc_filter, label="Accession number"
1136
+ )
1137
+ radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_gte = django_filters.NumberFilter(
1138
+ lookup_expr="gte",
1139
+ label="Min administered dose (MBq)",
1140
+ field_name="radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity",
1141
+ )
1142
+ radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_lte = django_filters.NumberFilter(
1143
+ lookup_expr="lte",
1144
+ label="Max administered dose (MBq)",
1145
+ field_name="radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity",
1146
+ )
1147
+ generalequipmentmoduleattr__unique_equipment_name__display_name = (
1148
+ django_filters.CharFilter(lookup_expr="icontains", label="Display name")
1149
+ )
1150
+ test_data = django_filters.ChoiceFilter(
1151
+ lookup_expr="isnull",
1152
+ label="Include possible test data",
1153
+ field_name="patientmoduleattr__not_patient_indicator",
1154
+ choices=TEST_CHOICES,
1155
+ widget=forms.Select,
1156
+ )
1157
+
1158
+ class Meta:
1159
+ """
1160
+ Lists fields and order-by information for django-filter filtering
1161
+ """
1162
+
1163
+ model = GeneralStudyModuleAttr
1164
+ fields = [
1165
+ "study_date__gt",
1166
+ "study_date__lt",
1167
+ "study_description",
1168
+ "procedure_code_meaning",
1169
+ "requested_procedure_code_meaning",
1170
+ "generalequipmentmoduleattr__institution_name",
1171
+ "generalequipmentmoduleattr__manufacturer",
1172
+ "generalequipmentmoduleattr__manufacturer_model_name",
1173
+ "generalequipmentmoduleattr__station_name",
1174
+ "patientstudymoduleattr__patient_age_decimal__gte",
1175
+ "patientstudymoduleattr__patient_age_decimal__lte",
1176
+ "patientstudymoduleattr__patient_weight__gte",
1177
+ "patientstudymoduleattr__patient_weight__lte",
1178
+ "accession_number",
1179
+ "radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_gte",
1180
+ "radiopharmaceuticalradiationdose__radiopharmaceuticaladministrationeventdata__administered_activity_lte",
1181
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1182
+ "test_data",
1183
+ ]
1184
+
1185
+ o = DateTimeOrderingFilter(
1186
+ choices=(
1187
+ ("study_description", "Study Description"),
1188
+ ("generalequipmentmoduleattr__institution_name", "Hospital"),
1189
+ ("generalequipmentmoduleattr__manufacturer", "Make"),
1190
+ ("generalequipmentmoduleattr__manufacturer_model_name", "Model"),
1191
+ (
1192
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1193
+ "Display name",
1194
+ ),
1195
+ ("study_description", "Study description"),
1196
+ ),
1197
+ fields=(
1198
+ ("study_description", "study_description"),
1199
+ (
1200
+ "generalequipmentmoduleattr__institution_name",
1201
+ "generalequipmentmoduleattr__institution_name",
1202
+ ),
1203
+ (
1204
+ "generalequipmentmoduleattr__manufacturer",
1205
+ "generalequipmentmoduleattr__manufacturer",
1206
+ ),
1207
+ (
1208
+ "generalequipmentmoduleattr__manufacturer_model_name",
1209
+ "generalequipmentmoduleattr__manufacturer_model_name",
1210
+ ),
1211
+ (
1212
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1213
+ "generalequipmentmoduleattr__unique_equipment_name__display_name",
1214
+ ),
1215
+ ("study_description", "study_description"),
1216
+ ),
1217
+ )
1218
+
1219
+
1220
+ class NMFilterPlusPid(NMSummaryListFilter):
1221
+ """Adding patient name and ID to filter if permissions allow"""
1222
+
1223
+ def __init__(self, *args, **kwargs):
1224
+ super(NMFilterPlusPid, self).__init__(*args, **kwargs)
1225
+ self.filters["patient_name"] = django_filters.CharFilter(
1226
+ method=custom_name_filter, label="Patient name"
1227
+ )
1228
+ self.filters["patient_id"] = django_filters.CharFilter(
1229
+ method=custom_id_filter, label="Patient ID"
1230
+ )
1231
+
1232
+
1233
+ def nm_filter(filters, pid=False):
1234
+ studies = GeneralStudyModuleAttr.objects.filter(modality_type="NM")
1235
+ if pid:
1236
+ return NMFilterPlusPid(
1237
+ filters, studies.order_by("-study_date", "-study_time").distinct()
1238
+ )
1239
+ return NMSummaryListFilter(
1240
+ filters, studies.order_by("-study_date", "-study_time").distinct()
1241
+ )