symbiote-cli 0.1.0

package/dist/src/cortex/stage-2-resolution.js

@@ -0,0 +1,469 @@
+import { existsSync, readFileSync } from 'node:fs';
+import { resolve, relative, dirname } from 'node:path';
+import { createRequire } from 'node:module';
+import { getGrammar } from '#core/languages.js';
+const cjsRequire = createRequire(import.meta.url);
+const Parser = cjsRequire('tree-sitter');
+const EXTENSIONS = ['.ts', '.tsx', '.js', '.jsx', '/index.ts', '/index.js'];
+function parseToRoot(content, grammar) {
+    const parser = new Parser();
+    parser.setLanguage(grammar);
+    const tree = parser.parse(content);
+    return tree.rootNode;
+}
+export async function runStage2(repo, rootDir, options) {
+    const start = Date.now();
+    const errors = [];
+    let filesProcessed = 0;
+    let edgesCreated = 0;
+    const files = options?.force ? await repo.getAllFileNodes() : await repo.getFilesByMaxDepth(2);
+    const targetSet = options?.targetFiles ? new Set(options.targetFiles) : null;
+    for (const file of files) {
+        if (targetSet && !targetSet.has(file.path))
+            continue;
+        if (!file.language)
+            continue;
+        if (!isJsTs(file.language))
+            continue;
+        const absPath = resolve(rootDir, file.path);
+        let content;
+        try {
+            content = readFileSync(absPath, 'utf-8');
+        }
+        catch (err) {
+            errors.push({
+                filePath: file.path,
+                stage: 2,
+                message: err instanceof Error ? err.message : String(err),
+            });
+            continue;
+        }
+        const grammar = getGrammar(file.language);
+        if (!grammar)
+            continue;
+        let rawImports;
+        try {
+            rawImports = extractImports(content, grammar);
+        }
+        catch (err) {
+            errors.push({
+                filePath: file.path,
+                stage: 2,
+                message: err instanceof Error ? err.message : String(err),
+            });
+            continue;
+        }
+        const fileId = `file:${file.path}`;
+        const fileDir = dirname(file.path);
+        const edges = [];
+        const symbolTable = new Map();
+        for (const raw of rawImports) {
+            if (!raw.sourcePath.startsWith('.'))
+                continue;
+            const resolvedAbs = resolveImportPath(rootDir, fileDir, raw.sourcePath);
+            const resolvedRel = resolvedAbs ? relative(rootDir, resolvedAbs) : null;
+            const confidence = resolvedRel ? 1.0 : 0.5;
+            const targetId = resolvedRel ? `file:${resolvedRel}` : `file:${raw.sourcePath}`;
+            edges.push({
+                sourceId: fileId,
+                targetId,
+                line: raw.line,
+                kind: raw.kind,
+                originalName: raw.originalName,
+                alias: raw.alias,
+                confidence,
+                stage: 2,
+                reason: null,
+            });
+            if (raw.localName && resolvedRel) {
+                const entry = {
+                    localName: raw.localName,
+                    originalName: raw.originalName ?? raw.localName,
+                    sourcePath: raw.sourcePath,
+                    resolvedSourcePath: resolvedRel,
+                    kind: raw.kind,
+                };
+                symbolTable.set(raw.localName, entry);
+            }
+            if (raw.kind === 're_export' && !raw.originalName && resolvedRel) {
+                const exported = collectExportedSymbols(resolvedRel, rootDir, new Set());
+                for (const sym of exported) {
+                    symbolTable.set(sym.name, {
+                        localName: sym.name,
+                        originalName: sym.name,
+                        sourcePath: raw.sourcePath,
+                        resolvedSourcePath: sym.sourceFile,
+                        kind: 're_export',
+                    });
+                }
+            }
+        }
+        resolveReExportChains(symbolTable, rootDir, new Set());
+        if (edges.length > 0) {
+            await repo.insertImportsEdges(edges);
+            edgesCreated += edges.length;
+        }
+        if (symbolTable.size > 0) {
+            await repo.setSymbolTable(fileId, symbolTable);
+        }
+        await repo.upsertFileNode({ ...file, depthLevel: 2 });
+        filesProcessed++;
+    }
+    return {
+        stage: 2,
+        filesProcessed,
+        nodesCreated: 0,
+        edgesCreated,
+        durationMs: Date.now() - start,
+        errors,
+    };
+}
+function isJsTs(language) {
+    return language === 'javascript' || language === 'typescript' || language === 'tsx';
+}
+function extractImports(content, grammar) {
+    const root = parseToRoot(content, grammar);
+    const imports = [];
+    for (const node of root.children) {
+        if (node.type === 'import_statement') {
+            extractImportStatement(node, imports);
+        }
+        else if (node.type === 'export_statement') {
+            extractReExport(node, imports);
+        }
+        else if (node.type === 'expression_statement') {
+            extractDynamicImport(node, imports);
+        }
+    }
+    return imports;
+}
+function extractImportStatement(node, imports) {
+    const source = node.childForFieldName('source');
+    if (!source)
+        return;
+    const sourcePath = source.text.replace(/['"]/g, '');
+    const line = node.startPosition.row + 1;
+    const importClause = node.children.find((c) => c.type === 'import_clause');
+    if (!importClause)
+        return;
+    for (const clause of importClause.children) {
+        if (clause.type === 'named_imports') {
+            for (const spec of clause.children) {
+                if (spec.type !== 'import_specifier')
+                    continue;
+                const nameNode = spec.childForFieldName('name');
+                if (!nameNode)
+                    continue;
+                const aliasNode = spec.childForFieldName('alias');
+                const originalName = nameNode.text;
+                const localName = aliasNode?.text ?? originalName;
+                imports.push({
+                    kind: 'named',
+                    originalName,
+                    localName,
+                    alias: aliasNode ? aliasNode.text : null,
+                    sourcePath,
+                    line,
+                });
+            }
+        }
+        else if (clause.type === 'namespace_import') {
+            const nameNode = clause.children.find((c) => c.type === 'identifier');
+            if (nameNode) {
+                imports.push({
+                    kind: 'namespace',
+                    originalName: null,
+                    localName: nameNode.text,
+                    alias: null,
+                    sourcePath,
+                    line,
+                });
+            }
+        }
+        else if (clause.type === 'identifier') {
+            imports.push({
+                kind: 'default',
+                originalName: 'default',
+                localName: clause.text,
+                alias: null,
+                sourcePath,
+                line,
+            });
+        }
+    }
+}
+function extractReExport(node, imports) {
+    const source = node.childForFieldName('source');
+    if (!source)
+        return;
+    const sourcePath = source.text.replace(/['"]/g, '');
+    const line = node.startPosition.row + 1;
+    const hasWildcard = node.children.some((c) => c.type === 'export_clause' && c.text === '*') ||
+        node.children.some((c) => c.type === '*');
+    if (hasWildcard) {
+        imports.push({
+            kind: 're_export',
+            originalName: null,
+            localName: null,
+            alias: null,
+            sourcePath,
+            line,
+        });
+        return;
+    }
+    const exportClause = node.children.find((c) => c.type === 'export_clause');
+    if (exportClause) {
+        for (const spec of exportClause.children) {
+            if (spec.type !== 'export_specifier')
+                continue;
+            const nameNode = spec.childForFieldName('name');
+            if (!nameNode)
+                continue;
+            const aliasNode = spec.childForFieldName('alias');
+            imports.push({
+                kind: 're_export',
+                originalName: nameNode.text,
+                localName: aliasNode?.text ?? nameNode.text,
+                alias: aliasNode ? aliasNode.text : null,
+                sourcePath,
+                line,
+            });
+        }
+    }
+}
+function extractDynamicImport(node, imports) {
+    const line = node.startPosition.row + 1;
+    findDynamicImports(node, imports, line);
+}
+function findDynamicImports(node, imports, line) {
+    if (node.type === 'call_expression') {
+        const fn = node.childForFieldName('function');
+        if (fn?.type === 'import') {
+            const args = node.childForFieldName('arguments');
+            if (args) {
+                const firstArg = args.children.find((c) => c.type === 'string' || c.type === 'template_string');
+                if (firstArg) {
+                    const sourcePath = firstArg.text.replace(/['"`]/g, '');
+                    imports.push({
+                        kind: 'dynamic',
+                        originalName: null,
+                        localName: null,
+                        alias: null,
+                        sourcePath,
+                        line,
+                    });
+                }
+            }
+        }
+    }
+    for (const child of node.children) {
+        findDynamicImports(child, imports, line);
+    }
+}
+function resolveImportPath(rootDir, fileDir, importPath) {
+    const absDir = resolve(rootDir, fileDir);
+    const base = resolve(absDir, importPath);
+    if (existsSync(base) && !isDirectory(base)) {
+        return base;
+    }
+    for (const ext of EXTENSIONS) {
+        const candidate = base + ext;
+        if (existsSync(candidate)) {
+            return candidate;
+        }
+    }
+    return null;
+}
+function isDirectory(p) {
+    try {
+        const { statSync } = require('node:fs');
+        return statSync(p).isDirectory();
+    }
+    catch {
+        return false;
+    }
+}
+function resolveReExportChains(symbolTable, rootDir, visited) {
+    for (const [key, entry] of symbolTable) {
+        const trueSource = followReExports(entry.originalName, entry.resolvedSourcePath, rootDir, visited);
+        if (trueSource && trueSource !== entry.resolvedSourcePath) {
+            symbolTable.set(key, { ...entry, resolvedSourcePath: trueSource });
+        }
+    }
+}
+function followReExports(symbolName, relPath, rootDir, visited) {
+    if (visited.has(relPath))
+        return relPath;
+    visited.add(relPath);
+    const absPath = resolve(rootDir, relPath);
+    let content;
+    try {
+        content = readFileSync(absPath, 'utf-8');
+    }
+    catch {
+        return relPath;
+    }
+    const language = detectLangFromPath(relPath);
+    if (!language)
+        return relPath;
+    const grammar = getGrammar(language);
+    if (!grammar)
+        return relPath;
+    const root = parseToRoot(content, grammar);
+    for (const node of root.children) {
+        if (node.type !== 'export_statement')
+            continue;
+        const source = node.childForFieldName('source');
+        if (!source)
+            continue;
+        const sourcePath = source.text.replace(/['"]/g, '');
+        if (!sourcePath.startsWith('.'))
+            continue;
+        const resolvedAbs = resolveImportPath(rootDir, dirname(relPath), sourcePath);
+        if (!resolvedAbs)
+            continue;
+        const resolvedRel = relative(rootDir, resolvedAbs);
+        const hasWildcard = node.children.some((c) => c.type === '*');
+        if (hasWildcard) {
+            const deeper = followReExports(symbolName, resolvedRel, rootDir, visited);
+            if (deeper && fileExportsSymbol(deeper, symbolName, rootDir)) {
+                return deeper;
+            }
+            continue;
+        }
+        const exportClause = node.children.find((c) => c.type === 'export_clause');
+        if (exportClause) {
+            for (const spec of exportClause.children) {
+                if (spec.type !== 'export_specifier')
+                    continue;
+                const nameNode = spec.childForFieldName('name');
+                const aliasNode = spec.childForFieldName('alias');
+                const exportedName = aliasNode?.text ?? nameNode?.text;
+                if (exportedName === symbolName && nameNode) {
+                    return followReExports(nameNode.text, resolvedRel, rootDir, visited);
+                }
+            }
+        }
+    }
+    return relPath;
+}
+function fileExportsSymbol(relPath, symbolName, rootDir) {
+    const absPath = resolve(rootDir, relPath);
+    let content;
+    try {
+        content = readFileSync(absPath, 'utf-8');
+    }
+    catch {
+        return false;
+    }
+    const language = detectLangFromPath(relPath);
+    if (!language)
+        return false;
+    const grammar = getGrammar(language);
+    if (!grammar)
+        return false;
+    const root = parseToRoot(content, grammar);
+    for (const node of root.children) {
+        if (node.type === 'export_statement') {
+            const declaration = node.childForFieldName('declaration');
+            if (declaration) {
+                const nameNode = declaration.childForFieldName('name');
+                if (nameNode?.text === symbolName)
+                    return true;
+            }
+            const source = node.childForFieldName('source');
+            if (source) {
+                const hasWildcard = node.children.some((c) => c.type === '*');
+                if (hasWildcard) {
+                    const sourcePath = source.text.replace(/['"]/g, '');
+                    if (sourcePath.startsWith('.')) {
+                        const resolvedAbs = resolveImportPath(rootDir, dirname(relPath), sourcePath);
+                        if (resolvedAbs) {
+                            const resolvedRel = relative(rootDir, resolvedAbs);
+                            if (fileExportsSymbol(resolvedRel, symbolName, rootDir)) {
+                                return true;
+                            }
+                        }
+                    }
+                }
+            }
+        }
+    }
+    return false;
+}
+function collectExportedSymbols(relPath, rootDir, visited) {
+    if (visited.has(relPath))
+        return [];
+    visited.add(relPath);
+    const absPath = resolve(rootDir, relPath);
+    let content;
+    try {
+        content = readFileSync(absPath, 'utf-8');
+    }
+    catch {
+        return [];
+    }
+    const language = detectLangFromPath(relPath);
+    if (!language)
+        return [];
+    const grammar = getGrammar(language);
+    if (!grammar)
+        return [];
+    const root = parseToRoot(content, grammar);
+    const symbols = [];
+    for (const node of root.children) {
+        if (node.type !== 'export_statement')
+            continue;
+        const source = node.childForFieldName('source');
+        if (source) {
+            const sourcePath = source.text.replace(/['"]/g, '');
+            if (!sourcePath.startsWith('.'))
+                continue;
+            const resolvedAbs = resolveImportPath(rootDir, dirname(relPath), sourcePath);
+            if (!resolvedAbs)
+                continue;
+            const resolvedRel = relative(rootDir, resolvedAbs);
+            const hasWildcard = node.children.some((c) => c.type === '*');
+            if (hasWildcard) {
+                symbols.push(...collectExportedSymbols(resolvedRel, rootDir, visited));
+                continue;
+            }
+            const exportClause = node.children.find((c) => c.type === 'export_clause');
+            if (exportClause) {
+                for (const spec of exportClause.children) {
+                    if (spec.type !== 'export_specifier')
+                        continue;
+                    const nameNode = spec.childForFieldName('name');
+                    const aliasNode = spec.childForFieldName('alias');
+                    if (nameNode) {
+                        symbols.push({
+                            name: aliasNode?.text ?? nameNode.text,
+                            sourceFile: resolvedRel,
+                        });
+                    }
+                }
+            }
+            continue;
+        }
+        const declaration = node.childForFieldName('declaration');
+        if (declaration) {
+            const nameNode = declaration.childForFieldName('name');
+            if (nameNode) {
+                symbols.push({ name: nameNode.text, sourceFile: relPath });
+            }
+        }
+    }
+    return symbols;
+}
+function detectLangFromPath(filePath) {
+    if (filePath.endsWith('.ts'))
+        return 'typescript';
+    if (filePath.endsWith('.tsx'))
+        return 'tsx';
+    if (filePath.endsWith('.js') || filePath.endsWith('.mjs'))
+        return 'javascript';
+    if (filePath.endsWith('.jsx'))
+        return 'javascript';
+    return null;
+}
+//# sourceMappingURL=stage-2-resolution.js.map

package/dist/src/cortex/stage-2-resolution.js.map

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package/dist/src/cortex/stage-3-callgraph.d.ts

@@ -0,0 +1,7 @@
+import { CortexRepository } from './repository.js';
+import type { StageResult } from './types.js';
+export declare function runStage3(repo: CortexRepository, rootDir: string, options?: {
+    force?: boolean;
+    targetFiles?: string[];
+}): Promise<StageResult>;
+//# sourceMappingURL=stage-3-callgraph.d.ts.map

package/dist/src/cortex/stage-3-callgraph.d.ts.map

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