molstar 3.3.1 → 3.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +3 -0
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/viewport.js +1 -1
- package/lib/apps/viewer/app.d.ts +7 -6
- package/lib/apps/viewer/app.js +2 -0
- package/lib/cli/chem-comp-dict/create-saccharides.d.ts +7 -0
- package/lib/cli/chem-comp-dict/create-saccharides.js +67 -0
- package/lib/commonjs/apps/docking-viewer/index.js +12 -12
- package/lib/commonjs/apps/docking-viewer/viewport.js +33 -33
- package/lib/commonjs/apps/viewer/app.d.ts +7 -6
- package/lib/commonjs/apps/viewer/app.js +24 -22
- package/lib/commonjs/apps/viewer/index.js +1 -1
- package/lib/commonjs/cli/chem-comp-dict/create-ions.js +6 -6
- package/lib/commonjs/cli/chem-comp-dict/create-saccharides.d.ts +7 -0
- package/lib/commonjs/cli/chem-comp-dict/create-saccharides.js +69 -0
- package/lib/commonjs/cli/chem-comp-dict/create-table.js +8 -8
- package/lib/commonjs/cli/chem-comp-dict/util.js +17 -17
- package/lib/commonjs/cli/cif2bcif/converter.js +9 -9
- package/lib/commonjs/cli/cif2bcif/index.js +8 -8
- package/lib/commonjs/cli/cifschema/index.js +27 -27
- package/lib/commonjs/cli/cifschema/util/cif-dic.js +1 -1
- package/lib/commonjs/cli/lipid-params/index.js +9 -9
- package/lib/commonjs/cli/state-docs/index.js +2 -2
- package/lib/commonjs/cli/structure-info/helpers.js +11 -11
- package/lib/commonjs/cli/structure-info/model.js +15 -15
- package/lib/commonjs/cli/structure-info/volume.js +9 -9
- package/lib/commonjs/examples/alpha-orbitals/controls.js +3 -3
- package/lib/commonjs/examples/alpha-orbitals/index.js +11 -11
- package/lib/commonjs/examples/basic-wrapper/controls.js +2 -2
- package/lib/commonjs/examples/basic-wrapper/index.js +22 -22
- package/lib/commonjs/examples/basic-wrapper/superposition.js +8 -8
- package/lib/commonjs/examples/domain-annotation-server/mapping.js +3 -3
- package/lib/commonjs/examples/domain-annotation-server/server.js +6 -6
- package/lib/commonjs/examples/domain-annotation-server/test.js +3 -3
- package/lib/commonjs/examples/lighting/index.js +6 -6
- package/lib/commonjs/examples/proteopedia-wrapper/annotation.js +2 -2
- package/lib/commonjs/examples/proteopedia-wrapper/helpers.js +4 -4
- package/lib/commonjs/examples/proteopedia-wrapper/index.js +26 -26
- package/lib/commonjs/examples/proteopedia-wrapper/ui/controls.js +2 -2
- package/lib/commonjs/examples/task.js +15 -15
- package/lib/commonjs/extensions/alpha-orbitals/collocation.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/data-model.js +1 -1
- package/lib/commonjs/extensions/alpha-orbitals/density.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/gpu/compute.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/orbitals.js +2 -2
- package/lib/commonjs/extensions/alpha-orbitals/transforms.js +13 -13
- package/lib/commonjs/extensions/anvil/algorithm.js +13 -13
- package/lib/commonjs/extensions/anvil/behavior.js +14 -14
- package/lib/commonjs/extensions/anvil/prop.js +7 -7
- package/lib/commonjs/extensions/anvil/representation.js +5 -5
- package/lib/commonjs/extensions/cellpack/index.js +1 -1
- package/lib/commonjs/extensions/cellpack/model.js +26 -24
- package/lib/commonjs/extensions/cellpack/preset.js +6 -6
- package/lib/commonjs/extensions/cellpack/property.js +3 -3
- package/lib/commonjs/extensions/cellpack/representation.js +2 -2
- package/lib/commonjs/extensions/cellpack/state.js +13 -13
- package/lib/commonjs/extensions/cellpack/util.js +14 -14
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.js +7 -7
- package/lib/commonjs/extensions/dnatco/confal-pyramids/property.js +5 -5
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.js +2 -2
- package/lib/commonjs/extensions/dnatco/confal-pyramids/util.js +1 -1
- package/lib/commonjs/extensions/g3d/data.js +6 -6
- package/lib/commonjs/extensions/g3d/format.js +14 -14
- package/lib/commonjs/extensions/g3d/model.js +4 -4
- package/lib/commonjs/extensions/geo-export/controls.js +3 -3
- package/lib/commonjs/extensions/geo-export/glb-exporter.js +9 -9
- package/lib/commonjs/extensions/geo-export/index.js +1 -1
- package/lib/commonjs/extensions/geo-export/mesh-exporter.js +12 -12
- package/lib/commonjs/extensions/geo-export/obj-exporter.js +7 -7
- package/lib/commonjs/extensions/geo-export/stl-exporter.js +7 -7
- package/lib/commonjs/extensions/geo-export/ui.js +7 -7
- package/lib/commonjs/extensions/geo-export/usdz-exporter.js +9 -9
- package/lib/commonjs/extensions/model-archive/quality-assessment/behavior.js +9 -9
- package/lib/commonjs/extensions/model-archive/quality-assessment/color/plddt.js +4 -4
- package/lib/commonjs/extensions/model-archive/quality-assessment/color/qmean.js +4 -4
- package/lib/commonjs/extensions/model-archive/quality-assessment/prop.js +5 -5
- package/lib/commonjs/extensions/model-export/export.js +4 -4
- package/lib/commonjs/extensions/model-export/index.js +1 -1
- package/lib/commonjs/extensions/model-export/ui.js +5 -5
- package/lib/commonjs/extensions/mp4-export/controls.js +5 -5
- package/lib/commonjs/extensions/mp4-export/encoder.js +4 -4
- package/lib/commonjs/extensions/mp4-export/index.js +1 -1
- package/lib/commonjs/extensions/mp4-export/ui.js +5 -5
- package/lib/commonjs/extensions/pdbe/preferred-assembly.js +2 -2
- package/lib/commonjs/extensions/pdbe/struct-ref-domain.js +2 -2
- package/lib/commonjs/extensions/pdbe/structure-quality-report/behavior.js +1 -1
- package/lib/commonjs/extensions/pdbe/structure-quality-report/prop.js +8 -8
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.js +17 -17
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.js +2 -2
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/prop.js +9 -9
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.js +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/ui.js +9 -9
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.js +17 -17
- package/lib/commonjs/extensions/rcsb/validation-report/prop.js +15 -15
- package/lib/commonjs/extensions/rcsb/validation-report/representation.js +3 -3
- package/lib/commonjs/extensions/zenodo/index.d.ts +7 -0
- package/lib/commonjs/extensions/zenodo/index.js +35 -0
- package/lib/commonjs/extensions/zenodo/ui.d.ts +61 -0
- package/lib/commonjs/extensions/zenodo/ui.js +306 -0
- package/lib/commonjs/mol-canvas3d/camera/stereo.js +1 -1
- package/lib/commonjs/mol-canvas3d/camera/util.js +1 -1
- package/lib/commonjs/mol-canvas3d/camera.js +2 -1
- package/lib/commonjs/mol-canvas3d/canvas3d.js +14 -14
- package/lib/commonjs/mol-canvas3d/controls/trackball.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/bounding-sphere-helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.js +5 -5
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.js +5 -5
- package/lib/commonjs/mol-canvas3d/helper/helper.js +1 -1
- package/lib/commonjs/mol-canvas3d/helper/interaction-events.js +2 -2
- package/lib/commonjs/mol-canvas3d/passes/draw.js +3 -3
- package/lib/commonjs/mol-canvas3d/passes/fxaa.js +3 -3
- package/lib/commonjs/mol-canvas3d/passes/image.js +1 -1
- package/lib/commonjs/mol-canvas3d/passes/marking.js +6 -6
- package/lib/commonjs/mol-canvas3d/passes/multi-sample.js +3 -3
- package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +12 -12
- package/lib/commonjs/mol-canvas3d/passes/smaa.js +9 -9
- package/lib/commonjs/mol-canvas3d/passes/wboit.js +3 -3
- package/lib/commonjs/mol-canvas3d/util.js +2 -2
- package/lib/commonjs/mol-data/db/column.js +2 -2
- package/lib/commonjs/mol-data/db/table.js +1 -1
- package/lib/commonjs/mol-data/db.js +1 -1
- package/lib/commonjs/mol-data/generic.js +3 -3
- package/lib/commonjs/mol-data/index.js +4 -4
- package/lib/commonjs/mol-data/int/interval.js +1 -1
- package/lib/commonjs/mol-data/int/ordered-set.js +1 -1
- package/lib/commonjs/mol-data/int/segmentation.js +1 -1
- package/lib/commonjs/mol-data/int/sorted-array.js +1 -1
- package/lib/commonjs/mol-data/util.js +7 -7
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +3 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +3 -3
- package/lib/commonjs/mol-geo/geometry/direct-volume/transfer-function.js +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.js +3 -3
- package/lib/commonjs/mol-geo/geometry/lines/lines.js +3 -3
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +3 -3
- package/lib/commonjs/mol-geo/geometry/points/points.js +3 -3
- package/lib/commonjs/mol-geo/geometry/size-data.js +1 -1
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +3 -3
- package/lib/commonjs/mol-geo/geometry/text/font-atlas.js +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text-builder.js +3 -2
- package/lib/commonjs/mol-geo/geometry/text/text.js +3 -3
- package/lib/commonjs/mol-geo/geometry/texture-mesh/color-smoothing.js +4 -4
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +3 -3
- package/lib/commonjs/mol-geo/primitive/circle.js +1 -1
- package/lib/commonjs/mol-geo/primitive/cylinder.js +1 -1
- package/lib/commonjs/mol-geo/primitive/polyhedron.js +1 -1
- package/lib/commonjs/mol-geo/primitive/prism.js +1 -1
- package/lib/commonjs/mol-geo/primitive/star.js +1 -1
- package/lib/commonjs/mol-geo/primitive/torus.js +1 -1
- package/lib/commonjs/mol-geo/util/marching-cubes/algorithm.js +9 -9
- package/lib/commonjs/mol-gl/compute/grid3d.js +5 -5
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/reduction.js +3 -3
- package/lib/commonjs/mol-gl/compute/histogram-pyramid/sum.js +3 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/active-voxels.js +3 -3
- package/lib/commonjs/mol-gl/compute/marching-cubes/isosurface.js +3 -3
- package/lib/commonjs/mol-gl/compute/util.js +3 -3
- package/lib/commonjs/mol-gl/renderable/cylinders.js +3 -3
- package/lib/commonjs/mol-gl/renderable/direct-volume.js +3 -3
- package/lib/commonjs/mol-gl/renderable/image.js +3 -3
- package/lib/commonjs/mol-gl/renderable/lines.js +3 -3
- package/lib/commonjs/mol-gl/renderable/mesh.js +3 -3
- package/lib/commonjs/mol-gl/renderable/points.js +3 -3
- package/lib/commonjs/mol-gl/renderable/schema.js +1 -1
- package/lib/commonjs/mol-gl/renderable/spheres.js +3 -3
- package/lib/commonjs/mol-gl/renderable/text.js +3 -3
- package/lib/commonjs/mol-gl/renderable/texture-mesh.js +3 -3
- package/lib/commonjs/mol-gl/renderable/util.js +1 -1
- package/lib/commonjs/mol-gl/shader-code.js +2 -1
- package/lib/commonjs/mol-gl/webgl/buffer.js +4 -5
- package/lib/commonjs/mol-gl/webgl/context.js +3 -3
- package/lib/commonjs/mol-gl/webgl/render-item.js +1 -1
- package/lib/commonjs/mol-gl/webgl/resources.js +2 -2
- package/lib/commonjs/mol-io/common/binary-cif/classifier.js +7 -6
- package/lib/commonjs/mol-io/common/binary-cif/decoder.js +4 -3
- package/lib/commonjs/mol-io/common/binary-cif.js +3 -3
- package/lib/commonjs/mol-io/common/io-buffer.d.ts +206 -0
- package/lib/commonjs/mol-io/common/io-buffer.js +408 -0
- package/lib/commonjs/mol-io/common/netcdf/reader.d.ts +78 -0
- package/lib/commonjs/mol-io/common/netcdf/reader.js +459 -0
- package/lib/commonjs/mol-io/common/typed-array.js +2 -2
- package/lib/commonjs/mol-io/reader/ccp4/parser.js +8 -8
- package/lib/commonjs/mol-io/reader/cif/binary/parser.js +3 -3
- package/lib/commonjs/mol-io/reader/cif/data-model.js +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.js +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema.js +2 -2
- package/lib/commonjs/mol-io/reader/cif/text/parser.js +7 -7
- package/lib/commonjs/mol-io/reader/cif.js +1 -1
- package/lib/commonjs/mol-io/reader/common/text/tokenizer.js +4 -4
- package/lib/commonjs/mol-io/reader/csv/data-model.js +1 -1
- package/lib/commonjs/mol-io/reader/csv/parser.js +7 -7
- package/lib/commonjs/mol-io/reader/cube/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/dcd/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/dsn6/parser.js +8 -8
- package/lib/commonjs/mol-io/reader/dx/parser.js +4 -4
- package/lib/commonjs/mol-io/reader/gro/parser.js +6 -6
- package/lib/commonjs/mol-io/reader/mol/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/mol2/parser.js +8 -8
- package/lib/commonjs/mol-io/reader/nctraj/parser.d.ts +18 -0
- package/lib/commonjs/mol-io/reader/nctraj/parser.js +101 -0
- package/lib/commonjs/mol-io/reader/obj/parser.js +4 -4
- package/lib/commonjs/mol-io/reader/pdb/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/ply/parser.js +4 -4
- package/lib/commonjs/mol-io/reader/prmtop/parser.d.ts +58 -0
- package/lib/commonjs/mol-io/reader/prmtop/parser.js +172 -0
- package/lib/commonjs/mol-io/reader/psf/parser.js +8 -8
- package/lib/commonjs/mol-io/reader/sdf/parser.js +2 -2
- package/lib/commonjs/mol-io/reader/top/parser.d.ts +37 -0
- package/lib/commonjs/mol-io/reader/top/parser.js +303 -0
- package/lib/commonjs/mol-io/reader/trr/parser.d.ts +22 -0
- package/lib/commonjs/mol-io/reader/trr/parser.js +146 -0
- package/lib/commonjs/mol-io/reader/xtc/parser.js +4 -4
- package/lib/commonjs/mol-io/reader/xyz/parser.js +2 -2
- package/lib/commonjs/mol-io/writer/cif/encoder.js +3 -2
- package/lib/commonjs/mol-io/writer/cif.js +1 -1
- package/lib/commonjs/mol-io/writer/ligand-encoder.js +1 -1
- package/lib/commonjs/mol-io/writer/mol/encoder.js +1 -1
- package/lib/commonjs/mol-io/writer/mol2/encoder.js +1 -1
- package/lib/commonjs/mol-math/geometry/boundary-helper.js +5 -5
- package/lib/commonjs/mol-math/geometry/gaussian-density/cpu.js +4 -4
- package/lib/commonjs/mol-math/geometry/gaussian-density/gpu.js +1 -1
- package/lib/commonjs/mol-math/geometry/gaussian-density.js +4 -4
- package/lib/commonjs/mol-math/geometry/molecular-surface.js +8 -8
- package/lib/commonjs/mol-math/geometry/primitives/sphere3d.js +1 -1
- package/lib/commonjs/mol-math/geometry.js +8 -8
- package/lib/commonjs/mol-math/graph/inter-unit-graph.js +1 -1
- package/lib/commonjs/mol-math/graph.js +1 -1
- package/lib/commonjs/mol-math/linear-algebra.js +2 -2
- package/lib/commonjs/mol-model/sequence/alignment/alignment.js +1 -1
- package/lib/commonjs/mol-model/sequence/sequence.js +2 -1
- package/lib/commonjs/mol-model/sequence.js +1 -1
- package/lib/commonjs/mol-model/shape.js +1 -1
- package/lib/commonjs/mol-model/structure/coordinates.js +1 -1
- package/lib/commonjs/mol-model/structure/export/categories/secondary-structure.js +2 -2
- package/lib/commonjs/mol-model/structure/model/model.js +3 -3
- package/lib/commonjs/mol-model/structure/model/properties/atomic.js +3 -3
- package/lib/commonjs/mol-model/structure/model/properties/coarse.js +2 -2
- package/lib/commonjs/mol-model/structure/model/types/saccharides.d.ts +8 -0
- package/lib/commonjs/mol-model/structure/model/types/saccharides.js +11 -0
- package/lib/commonjs/mol-model/structure/model.js +3 -3
- package/lib/commonjs/mol-model/structure/query/queries/generators.js +2 -2
- package/lib/commonjs/mol-model/structure/query/queries/modifiers.js +2 -2
- package/lib/commonjs/mol-model/structure/query.js +6 -6
- package/lib/commonjs/mol-model/structure/structure/carbohydrates/compute.js +1 -1
- package/lib/commonjs/mol-model/structure/structure/carbohydrates/constants.d.ts +1 -1
- package/lib/commonjs/mol-model/structure/structure/carbohydrates/constants.js +6 -9
- package/lib/commonjs/mol-model/structure/structure/element/element.js +5 -5
- package/lib/commonjs/mol-model/structure/structure/element.js +1 -1
- package/lib/commonjs/mol-model/structure/structure/structure.js +5 -5
- package/lib/commonjs/mol-model/structure/structure/symmetry.js +10 -10
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/data.js +2 -2
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/inter-compute.js +3 -3
- package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -1
- package/lib/commonjs/mol-model/structure/structure/unit/bonds.js +3 -3
- package/lib/commonjs/mol-model/structure/structure/unit.js +4 -4
- package/lib/commonjs/mol-model/structure/structure/util/superposition.js +1 -1
- package/lib/commonjs/mol-model/structure/structure.js +2 -2
- package/lib/commonjs/mol-model/structure/topology.js +1 -1
- package/lib/commonjs/mol-model/structure.js +6 -6
- package/lib/commonjs/mol-model/volume.js +2 -2
- package/lib/commonjs/mol-model-formats/shape/ply.js +7 -7
- package/lib/commonjs/mol-model-formats/structure/basic/atomic.d.ts +1 -1
- package/lib/commonjs/mol-model-formats/structure/basic/atomic.js +2 -15
- package/lib/commonjs/mol-model-formats/structure/basic/coarse.js +3 -3
- package/lib/commonjs/mol-model-formats/structure/basic/entities.js +1 -1
- package/lib/commonjs/mol-model-formats/structure/basic/parser.d.ts +1 -1
- package/lib/commonjs/mol-model-formats/structure/basic/parser.js +10 -10
- package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +2 -2
- package/lib/commonjs/mol-model-formats/structure/basic/schema.js +7 -2
- package/lib/commonjs/mol-model-formats/structure/basic/sort.js +2 -2
- package/lib/commonjs/mol-model-formats/structure/basic/util.d.ts +33 -2
- package/lib/commonjs/mol-model-formats/structure/basic/util.js +26 -2
- package/lib/commonjs/mol-model-formats/structure/cif-core.js +6 -6
- package/lib/commonjs/mol-model-formats/structure/common/component.js +5 -1
- package/lib/commonjs/mol-model-formats/structure/cube.js +5 -5
- package/lib/commonjs/mol-model-formats/structure/dcd.js +2 -2
- package/lib/commonjs/mol-model-formats/structure/gro.js +5 -3
- package/lib/commonjs/mol-model-formats/structure/mmcif.d.ts +1 -1
- package/lib/commonjs/mol-model-formats/structure/mmcif.js +4 -2
- package/lib/commonjs/mol-model-formats/structure/mol.js +5 -5
- package/lib/commonjs/mol-model-formats/structure/mol2.js +6 -6
- package/lib/commonjs/mol-model-formats/structure/nctraj.d.ts +9 -0
- package/lib/commonjs/mol-model-formats/structure/nctraj.js +60 -0
- package/lib/commonjs/mol-model-formats/structure/pdb/to-cif.js +2 -2
- package/lib/commonjs/mol-model-formats/structure/pdb.d.ts +1 -1
- package/lib/commonjs/mol-model-formats/structure/pdb.js +7 -5
- package/lib/commonjs/mol-model-formats/structure/prmtop.d.ts +16 -0
- package/lib/commonjs/mol-model-formats/structure/prmtop.js +147 -0
- package/lib/commonjs/mol-model-formats/structure/property/bonds/index-pair.js +1 -1
- package/lib/commonjs/mol-model-formats/structure/property/symmetry.js +11 -1
- package/lib/commonjs/mol-model-formats/structure/psf.js +5 -3
- package/lib/commonjs/mol-model-formats/structure/top.d.ts +16 -0
- package/lib/commonjs/mol-model-formats/structure/top.js +189 -0
- package/lib/commonjs/mol-model-formats/structure/trr.d.ts +9 -0
- package/lib/commonjs/mol-model-formats/structure/trr.js +46 -0
- package/lib/commonjs/mol-model-formats/structure/util.d.ts +2 -2
- package/lib/commonjs/mol-model-formats/structure/util.js +19 -20
- package/lib/commonjs/mol-model-formats/structure/xtc.js +2 -2
- package/lib/commonjs/mol-model-formats/structure/xyz.js +2 -2
- package/lib/commonjs/mol-model-formats/volume/ccp4.js +2 -2
- package/lib/commonjs/mol-model-formats/volume/cube.js +2 -2
- package/lib/commonjs/mol-model-formats/volume/density-server.js +2 -2
- package/lib/commonjs/mol-model-formats/volume/dsn6.js +2 -2
- package/lib/commonjs/mol-model-formats/volume/dx.js +2 -2
- package/lib/commonjs/mol-model-props/common/custom-element-property.js +2 -2
- package/lib/commonjs/mol-model-props/common/custom-model-property.js +5 -5
- package/lib/commonjs/mol-model-props/common/custom-property.js +1 -1
- package/lib/commonjs/mol-model-props/common/custom-structure-property.js +6 -6
- package/lib/commonjs/mol-model-props/computed/accessible-surface-area/shrake-rupley/area.js +2 -2
- package/lib/commonjs/mol-model-props/computed/accessible-surface-area/shrake-rupley.js +5 -5
- package/lib/commonjs/mol-model-props/computed/accessible-surface-area.js +4 -4
- package/lib/commonjs/mol-model-props/computed/chemistry/valence-model.js +3 -3
- package/lib/commonjs/mol-model-props/computed/helix-orientation.js +2 -2
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- package/lib/commonjs/servers/volume/pack/writer.js +2 -2
- package/lib/commonjs/servers/volume/pack.js +1 -1
- package/lib/commonjs/servers/volume/query.js +4 -4
- package/lib/commonjs/servers/volume/server/algebra/box.js +1 -1
- package/lib/commonjs/servers/volume/server/api.js +8 -8
- package/lib/commonjs/servers/volume/server/local-api.js +8 -8
- package/lib/commonjs/servers/volume/server/query/compose.js +8 -8
- package/lib/commonjs/servers/volume/server/query/execute.js +10 -10
- package/lib/commonjs/servers/volume/server/query/identify.js +2 -2
- package/lib/commonjs/servers/volume/server/web-api.js +7 -7
- package/lib/commonjs/servers/volume/server.js +2 -2
- package/lib/examples/alpha-orbitals/controls.js +2 -2
- package/lib/examples/basic-wrapper/controls.js +1 -1
- package/lib/examples/proteopedia-wrapper/ui/controls.js +1 -1
- package/lib/extensions/cellpack/model.js +4 -2
- package/lib/extensions/cellpack/state.js +2 -2
- package/lib/extensions/geo-export/ui.js +2 -2
- package/lib/extensions/model-export/ui.js +2 -2
- package/lib/extensions/mp4-export/ui.js +2 -2
- package/lib/extensions/rcsb/assembly-symmetry/ui.js +3 -3
- package/lib/extensions/zenodo/index.d.ts +7 -0
- package/lib/extensions/zenodo/index.js +32 -0
- package/lib/extensions/zenodo/ui.d.ts +61 -0
- package/lib/extensions/zenodo/ui.js +303 -0
- package/lib/mol-canvas3d/camera.js +2 -1
- package/lib/mol-canvas3d/helper/camera-helper.js +1 -1
- package/lib/mol-canvas3d/helper/handle-helper.js +1 -1
- package/lib/mol-canvas3d/helper/interaction-events.js +1 -1
- package/lib/mol-geo/geometry/text/text-builder.js +2 -1
- package/lib/mol-gl/shader-code.js +2 -1
- package/lib/mol-gl/webgl/buffer.js +2 -3
- package/lib/mol-io/common/binary-cif/classifier.js +3 -2
- package/lib/mol-io/common/binary-cif/decoder.js +4 -3
- package/lib/mol-io/common/io-buffer.d.ts +206 -0
- package/lib/mol-io/common/io-buffer.js +405 -0
- package/lib/mol-io/common/netcdf/reader.d.ts +78 -0
- package/lib/mol-io/common/netcdf/reader.js +456 -0
- package/lib/mol-io/reader/cif/schema/mmcif.d.ts +1 -1
- package/lib/mol-io/reader/nctraj/parser.d.ts +18 -0
- package/lib/mol-io/reader/nctraj/parser.js +97 -0
- package/lib/mol-io/reader/prmtop/parser.d.ts +58 -0
- package/lib/mol-io/reader/prmtop/parser.js +168 -0
- package/lib/mol-io/reader/top/parser.d.ts +37 -0
- package/lib/mol-io/reader/top/parser.js +299 -0
- package/lib/mol-io/reader/trr/parser.d.ts +22 -0
- package/lib/mol-io/reader/trr/parser.js +142 -0
- package/lib/mol-io/writer/cif/encoder.js +2 -1
- package/lib/mol-model/sequence/sequence.js +2 -1
- package/lib/mol-model/structure/model/types/saccharides.d.ts +8 -0
- package/lib/mol-model/structure/model/types/saccharides.js +8 -0
- package/lib/mol-model/structure/structure/carbohydrates/constants.d.ts +1 -1
- package/lib/mol-model/structure/structure/carbohydrates/constants.js +6 -9
- package/lib/mol-model-formats/structure/basic/atomic.d.ts +1 -1
- package/lib/mol-model-formats/structure/basic/atomic.js +1 -14
- package/lib/mol-model-formats/structure/basic/parser.d.ts +1 -1
- package/lib/mol-model-formats/structure/basic/parser.js +1 -1
- package/lib/mol-model-formats/structure/basic/schema.d.ts +2 -2
- package/lib/mol-model-formats/structure/basic/schema.js +7 -2
- package/lib/mol-model-formats/structure/basic/util.d.ts +33 -2
- package/lib/mol-model-formats/structure/basic/util.js +24 -1
- package/lib/mol-model-formats/structure/cif-core.js +4 -4
- package/lib/mol-model-formats/structure/common/component.js +5 -1
- package/lib/mol-model-formats/structure/cube.js +3 -3
- package/lib/mol-model-formats/structure/gro.js +3 -1
- package/lib/mol-model-formats/structure/mmcif.d.ts +1 -1
- package/lib/mol-model-formats/structure/mmcif.js +4 -2
- package/lib/mol-model-formats/structure/mol.js +3 -3
- package/lib/mol-model-formats/structure/mol2.js +4 -4
- package/lib/mol-model-formats/structure/nctraj.d.ts +9 -0
- package/lib/mol-model-formats/structure/nctraj.js +56 -0
- package/lib/mol-model-formats/structure/pdb.d.ts +1 -1
- package/lib/mol-model-formats/structure/pdb.js +5 -3
- package/lib/mol-model-formats/structure/prmtop.d.ts +16 -0
- package/lib/mol-model-formats/structure/prmtop.js +144 -0
- package/lib/mol-model-formats/structure/property/symmetry.js +11 -1
- package/lib/mol-model-formats/structure/psf.js +3 -1
- package/lib/mol-model-formats/structure/top.d.ts +16 -0
- package/lib/mol-model-formats/structure/top.js +186 -0
- package/lib/mol-model-formats/structure/trr.d.ts +9 -0
- package/lib/mol-model-formats/structure/trr.js +42 -0
- package/lib/mol-model-formats/structure/util.d.ts +2 -2
- package/lib/mol-model-formats/structure/util.js +19 -20
- package/lib/mol-model-formats/structure/xyz.js +2 -2
- package/lib/mol-plugin/context.d.ts +2 -1
- package/lib/mol-plugin/context.js +4 -3
- package/lib/mol-plugin/spec.js +1 -1
- package/lib/mol-plugin/version.js +2 -2
- package/lib/mol-plugin-state/actions/file.d.ts +1 -1
- package/lib/mol-plugin-state/actions/file.js +88 -55
- package/lib/mol-plugin-state/actions/structure.d.ts +11 -2
- package/lib/mol-plugin-state/actions/structure.js +174 -4
- package/lib/mol-plugin-state/actions/volume.js +3 -2
- package/lib/mol-plugin-state/formats/{structure.d.ts → coordinates.d.ts} +34 -18
- package/lib/mol-plugin-state/formats/coordinates.js +67 -0
- package/lib/mol-plugin-state/formats/registry.d.ts +3 -3
- package/lib/mol-plugin-state/formats/registry.js +13 -8
- package/lib/mol-plugin-state/formats/topology.d.ts +73 -0
- package/lib/mol-plugin-state/formats/topology.js +84 -0
- package/lib/mol-plugin-state/helpers/structure-component.js +2 -1
- package/lib/mol-plugin-state/manager/snapshots.js +4 -4
- package/lib/mol-plugin-state/objects.d.ts +47 -1
- package/lib/mol-plugin-state/objects.js +17 -1
- package/lib/mol-plugin-state/transforms/data.d.ts +6 -0
- package/lib/mol-plugin-state/transforms/data.js +61 -9
- package/lib/mol-plugin-state/transforms/model.d.ts +14 -2
- package/lib/mol-plugin-state/transforms/model.js +112 -3
- package/lib/mol-plugin-ui/base.js +1 -1
- package/lib/mol-plugin-ui/controls/action-menu.js +7 -7
- package/lib/mol-plugin-ui/controls/color.js +3 -3
- package/lib/mol-plugin-ui/controls/common.js +10 -10
- package/lib/mol-plugin-ui/controls/icons.js +70 -70
- package/lib/mol-plugin-ui/controls/legend.js +3 -3
- package/lib/mol-plugin-ui/controls/line-graph/line-graph-component.js +1 -1
- package/lib/mol-plugin-ui/controls/parameters.js +51 -51
- package/lib/mol-plugin-ui/controls/screenshot.js +2 -2
- package/lib/mol-plugin-ui/controls/slider.js +5 -5
- package/lib/mol-plugin-ui/controls.js +7 -7
- package/lib/mol-plugin-ui/custom/volume.js +4 -4
- package/lib/mol-plugin-ui/left-panel.d.ts +8 -1
- package/lib/mol-plugin-ui/left-panel.js +33 -12
- package/lib/mol-plugin-ui/plugin.js +10 -10
- package/lib/mol-plugin-ui/sequence/sequence.js +1 -1
- package/lib/mol-plugin-ui/sequence.js +5 -5
- package/lib/mol-plugin-ui/state/actions.js +1 -1
- package/lib/mol-plugin-ui/state/animation.js +1 -1
- package/lib/mol-plugin-ui/state/common.js +7 -7
- package/lib/mol-plugin-ui/state/snapshots.js +9 -9
- package/lib/mol-plugin-ui/state/tree.js +14 -14
- package/lib/mol-plugin-ui/state/update-transform.js +1 -1
- package/lib/mol-plugin-ui/structure/components.js +10 -10
- package/lib/mol-plugin-ui/structure/focus.js +1 -1
- package/lib/mol-plugin-ui/structure/generic.js +4 -4
- package/lib/mol-plugin-ui/structure/measurements.js +8 -8
- package/lib/mol-plugin-ui/structure/quick-styles.js +2 -2
- package/lib/mol-plugin-ui/structure/selection.js +7 -7
- package/lib/mol-plugin-ui/structure/source.js +4 -4
- package/lib/mol-plugin-ui/structure/superposition.js +8 -8
- package/lib/mol-plugin-ui/structure/volume.js +4 -4
- package/lib/mol-plugin-ui/task.js +5 -5
- package/lib/mol-plugin-ui/toast.js +4 -4
- package/lib/mol-plugin-ui/viewport/canvas.js +3 -3
- package/lib/mol-plugin-ui/viewport/help.js +8 -8
- package/lib/mol-plugin-ui/viewport/screenshot.js +3 -3
- package/lib/mol-plugin-ui/viewport/simple-settings.js +1 -1
- package/lib/mol-plugin-ui/viewport.js +4 -4
- package/lib/mol-script/language/parser.js +7 -4
- package/lib/mol-task/util/scheduler.d.ts +2 -2
- package/lib/mol-task/util/scheduler.js +7 -7
- package/lib/mol-theme/color/hydrophobicity.js +2 -2
- package/lib/mol-util/data-source.js +2 -1
- package/lib/mol-util/file-info.d.ts +1 -3
- package/lib/mol-util/file-info.js +2 -10
- package/lib/mol-util/index.d.ts +1 -0
- package/lib/mol-util/index.js +5 -0
- package/lib/mol-util/zip/deflate.js +2 -1
- package/lib/mol-util/zip/zip.d.ts +7 -1
- package/lib/mol-util/zip/zip.js +5 -1
- package/lib/servers/model/config.d.ts +2 -2
- package/package.json +16 -16
- package/lib/commonjs/mol-plugin-state/formats/structure.js +0 -64
- package/lib/mol-plugin-state/formats/structure.js +0 -61
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Object.defineProperty(exports, "__esModule", { value: true });
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var StaticRepresentation =
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var StaticCamera =
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var StaticMisc =
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var DynamicRepresentation =
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var DynamicCamera =
|
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var DynamicCustomProps =
|
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tslib_1.__exportStar(require("./behavior/behavior"), exports);
|
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var StaticState = tslib_1.__importStar(require("./behavior/static/state"));
|
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var StaticRepresentation = tslib_1.__importStar(require("./behavior/static/representation"));
|
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var StaticCamera = tslib_1.__importStar(require("./behavior/static/camera"));
|
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var StaticMisc = tslib_1.__importStar(require("./behavior/static/misc"));
|
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var DynamicRepresentation = tslib_1.__importStar(require("./behavior/dynamic/representation"));
|
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var DynamicCamera = tslib_1.__importStar(require("./behavior/dynamic/camera"));
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var DynamicCustomProps = tslib_1.__importStar(require("./behavior/dynamic/custom-props"));
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|
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State: StaticState,
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Representation: StaticRepresentation,
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@@ -63,9 +63,9 @@ var PluginCommandManager = /** @class */ (function () {
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|
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|
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|
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actions = this.subs.get(instance.cmd.id);
|
|
@@ -1,5 +1,5 @@
|
|
|
1
1
|
/**
|
|
2
|
-
* Copyright (c) 2018-
|
|
2
|
+
* Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
|
|
3
3
|
*
|
|
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|
* @author David Sehnal <david.sehnal@gmail.com>
|
|
5
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|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
@@ -143,6 +143,7 @@ export declare class PluginContext {
|
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readonly customModelProperties: CustomProperty.Registry<Model>;
|
|
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readonly customStructureProperties: CustomProperty.Registry<Structure>;
|
|
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|
readonly customStructureControls: Map<string, new () => any>;
|
|
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|
+
readonly customImportControls: Map<string, new () => any>;
|
|
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|
readonly genericRepresentationControls: Map<string, (selection: StructureHierarchyManager['selection']) => [StructureHierarchyRef[], string]>;
|
|
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|
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|
|
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|
* Used to store application specific custom state which is then available
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
"use strict";
|
|
2
2
|
/**
|
|
3
|
-
* Copyright (c) 2018-
|
|
3
|
+
* Copyright (c) 2018-2022 mol* contributors, licensed under MIT, See LICENSE file for more info.
|
|
4
4
|
*
|
|
5
5
|
* @author David Sehnal <david.sehnal@gmail.com>
|
|
6
6
|
* @author Alexander Rose <alexander.rose@weirdbyte.de>
|
|
@@ -8,7 +8,7 @@
|
|
|
8
8
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
9
9
|
exports.PluginContext = void 0;
|
|
10
10
|
var tslib_1 = require("tslib");
|
|
11
|
-
var immer_1 =
|
|
11
|
+
var immer_1 = tslib_1.__importStar(require("immer"));
|
|
12
12
|
var immutable_1 = require("immutable");
|
|
13
13
|
var rxjs_1 = require("rxjs");
|
|
14
14
|
var operators_1 = require("rxjs/operators");
|
|
@@ -159,6 +159,7 @@ var PluginContext = /** @class */ (function () {
|
|
|
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|
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|
|
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|
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|
|
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|
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|
|
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|
+
this.customImportControls = new Map();
|
|
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|
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|
|
163
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|
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|
|
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|
* Used to store application specific custom state which is then available
|
|
@@ -294,8 +295,8 @@ var PluginContext = /** @class */ (function () {
|
|
|
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|
this.state.dispose();
|
|
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296
|
this.managers.task.dispose();
|
|
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|
this.helpers.substructureParent.dispose();
|
|
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|
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(0, object_1.objectForEach)(this.managers, function (m) { var _a
|
|
298
|
-
(0, object_1.objectForEach)(this.managers.structure, function (m) { var _a
|
|
298
|
+
(0, object_1.objectForEach)(this.managers, function (m) { var _a; return (_a = m === null || m === void 0 ? void 0 : m.dispose) === null || _a === void 0 ? void 0 : _a.call(m); });
|
|
299
|
+
(0, object_1.objectForEach)(this.managers.structure, function (m) { var _a; return (_a = m === null || m === void 0 ? void 0 : m.dispose) === null || _a === void 0 ? void 0 : _a.call(m); });
|
|
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|
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|
|
300
301
|
};
|
|
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302
|
PluginContext.prototype.initBehaviorEvents = function () {
|
|
@@ -346,9 +347,9 @@ var PluginContext = /** @class */ (function () {
|
|
|
346
347
|
this.subs.push((0, rxjs_1.merge)(this.state.data.events.log, this.state.behaviors.events.log).subscribe(function (e) { return _this.events.log.next(e); }));
|
|
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348
|
};
|
|
348
349
|
PluginContext.prototype.initBehaviors = function () {
|
|
349
|
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return
|
|
350
|
+
return tslib_1.__awaiter(this, void 0, void 0, function () {
|
|
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|
var tree, _i, _a, cat, _b, _c, b, cat, _d, _e, b, cat;
|
|
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|
-
return
|
|
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|
+
return tslib_1.__generator(this, function (_f) {
|
|
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353
|
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|
|
353
354
|
case 0:
|
|
354
355
|
tree = this.state.behaviors.build();
|
|
@@ -408,9 +409,9 @@ var PluginContext = /** @class */ (function () {
|
|
|
408
409
|
}
|
|
409
410
|
};
|
|
410
411
|
PluginContext.prototype.init = function () {
|
|
411
|
-
return
|
|
412
|
+
return tslib_1.__awaiter(this, void 0, void 0, function () {
|
|
412
413
|
var _this = this;
|
|
413
|
-
return
|
|
414
|
+
return tslib_1.__generator(this, function (_a) {
|
|
414
415
|
switch (_a.label) {
|
|
415
416
|
case 0:
|
|
416
417
|
this.subs.push(this.events.log.subscribe(function (e) { return _this.log.entries = _this.log.entries.push(e); }));
|
|
@@ -32,9 +32,9 @@ exports.PluginLayoutStateParams = {
|
|
|
32
32
|
controlsDisplay: param_definition_1.ParamDefinition.Value('outside', { isHidden: true })
|
|
33
33
|
};
|
|
34
34
|
var PluginLayout = /** @class */ (function (_super) {
|
|
35
|
-
|
|
35
|
+
tslib_1.__extends(PluginLayout, _super);
|
|
36
36
|
function PluginLayout(context) {
|
|
37
|
-
var _this = _super.call(this,
|
|
37
|
+
var _this = _super.call(this, tslib_1.__assign(tslib_1.__assign({}, param_definition_1.ParamDefinition.getDefaultValues(exports.PluginLayoutStateParams)), (context.spec.layout && context.spec.layout.initial))) || this;
|
|
38
38
|
_this.context = context;
|
|
39
39
|
_this.events = {
|
|
40
40
|
updated: _this.ev()
|
|
@@ -36,10 +36,10 @@ exports.PluginSpec = PluginSpec;
|
|
|
36
36
|
var DefaultPluginSpec = function () { return ({
|
|
37
37
|
actions: [
|
|
38
38
|
PluginSpec.Action(actions_1.StateActions.Structure.DownloadStructure),
|
|
39
|
-
PluginSpec.Action(actions_1.StateActions.Structure.AddTrajectory),
|
|
40
39
|
PluginSpec.Action(actions_1.StateActions.Volume.DownloadDensity),
|
|
41
40
|
PluginSpec.Action(actions_1.StateActions.DataFormat.DownloadFile),
|
|
42
41
|
PluginSpec.Action(actions_1.StateActions.DataFormat.OpenFiles),
|
|
42
|
+
PluginSpec.Action(actions_1.StateActions.Structure.LoadTrajectory),
|
|
43
43
|
PluginSpec.Action(actions_1.StateActions.Structure.EnableModelCustomProps),
|
|
44
44
|
PluginSpec.Action(actions_1.StateActions.Structure.EnableStructureCustomProps),
|
|
45
45
|
// Volume streaming
|
|
@@ -19,7 +19,7 @@ var rxjs_1 = require("rxjs");
|
|
|
19
19
|
var component_1 = require("../mol-plugin-state/component");
|
|
20
20
|
var config_1 = require("./config");
|
|
21
21
|
var PluginState = /** @class */ (function (_super) {
|
|
22
|
-
|
|
22
|
+
tslib_1.__extends(PluginState, _super);
|
|
23
23
|
function PluginState(plugin) {
|
|
24
24
|
var _this = _super.call(this) || this;
|
|
25
25
|
_this.plugin = plugin;
|
|
@@ -39,7 +39,7 @@ var PluginState = /** @class */ (function (_super) {
|
|
|
39
39
|
};
|
|
40
40
|
_this.snapshotParams = _this.ev.behavior(PluginState.DefaultSnapshotParams);
|
|
41
41
|
_this.setSnapshotParams = function (params) {
|
|
42
|
-
_this.snapshotParams.next(
|
|
42
|
+
_this.snapshotParams.next(tslib_1.__assign(tslib_1.__assign({}, PluginState.DefaultSnapshotParams), params));
|
|
43
43
|
};
|
|
44
44
|
return _this;
|
|
45
45
|
}
|
|
@@ -50,7 +50,7 @@ var PluginState = /** @class */ (function (_super) {
|
|
|
50
50
|
});
|
|
51
51
|
PluginState.prototype.getSnapshot = function (params) {
|
|
52
52
|
var _a, _b;
|
|
53
|
-
var p =
|
|
53
|
+
var p = tslib_1.__assign(tslib_1.__assign({}, this.snapshotParams.value), params);
|
|
54
54
|
return {
|
|
55
55
|
id: mol_util_1.UUID.create22(),
|
|
56
56
|
data: p.data ? this.data.getSnapshot() : void 0,
|
|
@@ -73,9 +73,9 @@ var PluginState = /** @class */ (function (_super) {
|
|
|
73
73
|
};
|
|
74
74
|
PluginState.prototype.setSnapshot = function (snapshot) {
|
|
75
75
|
var _a, _b, _c;
|
|
76
|
-
return
|
|
76
|
+
return tslib_1.__awaiter(this, void 0, void 0, function () {
|
|
77
77
|
var settings;
|
|
78
|
-
return
|
|
78
|
+
return tslib_1.__generator(this, function (_d) {
|
|
79
79
|
switch (_d.label) {
|
|
80
80
|
case 0: return [4 /*yield*/, this.animation.stop()];
|
|
81
81
|
case 1:
|
|
@@ -55,9 +55,9 @@ var TaskManager = /** @class */ (function () {
|
|
|
55
55
|
};
|
|
56
56
|
};
|
|
57
57
|
TaskManager.prototype.run = function (task, params) {
|
|
58
|
-
return
|
|
58
|
+
return tslib_1.__awaiter(this, void 0, void 0, function () {
|
|
59
59
|
var id, ctx, ret;
|
|
60
|
-
return
|
|
60
|
+
return tslib_1.__generator(this, function (_a) {
|
|
61
61
|
switch (_a.label) {
|
|
62
62
|
case 0:
|
|
63
63
|
id = this.id++;
|
|
@@ -113,9 +113,9 @@ exports.TaskManager = TaskManager;
|
|
|
113
113
|
}
|
|
114
114
|
function testTask(N) {
|
|
115
115
|
var _this = this;
|
|
116
|
-
return mol_task_1.Task.create('Test', function (ctx) { return
|
|
116
|
+
return mol_task_1.Task.create('Test', function (ctx) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
|
|
117
117
|
var i;
|
|
118
|
-
return
|
|
118
|
+
return tslib_1.__generator(this, function (_a) {
|
|
119
119
|
switch (_a.label) {
|
|
120
120
|
case 0:
|
|
121
121
|
i = 0;
|
|
@@ -13,7 +13,7 @@ var component_1 = require("../../mol-plugin-state/component");
|
|
|
13
13
|
var immutable_1 = require("immutable");
|
|
14
14
|
var commands_1 = require("../commands");
|
|
15
15
|
var PluginToastManager = /** @class */ (function (_super) {
|
|
16
|
-
|
|
16
|
+
tslib_1.__extends(PluginToastManager, _super);
|
|
17
17
|
function PluginToastManager(plugin) {
|
|
18
18
|
var _this = _super.call(this, { entries: (0, immutable_1.OrderedMap)() }) || this;
|
|
19
19
|
_this.events = {
|
|
@@ -20,7 +20,7 @@ var download_1 = require("../../mol-util/download");
|
|
|
20
20
|
var param_definition_1 = require("../../mol-util/param-definition");
|
|
21
21
|
var set_1 = require("../../mol-util/set");
|
|
22
22
|
var ViewportScreenshotHelper = /** @class */ (function (_super) {
|
|
23
|
-
|
|
23
|
+
tslib_1.__extends(ViewportScreenshotHelper, _super);
|
|
24
24
|
function ViewportScreenshotHelper(plugin) {
|
|
25
25
|
var _this = _super.call(this) || this;
|
|
26
26
|
_this.plugin = plugin;
|
|
@@ -135,10 +135,10 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
|
|
|
135
135
|
mode: mutlisample ? 'on' : 'off',
|
|
136
136
|
sampleLevel: colorBufferFloat && textureFloat ? 4 : 2
|
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postprocessing:
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? { name: 'on', params:
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postprocessing: tslib_1.__assign(tslib_1.__assign({}, c.props.postprocessing), { occlusion: aoProps.name === 'on'
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? { name: 'on', params: tslib_1.__assign(tslib_1.__assign({}, aoProps.params), { samples: 128, resolutionScale: 1 }) }
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: aoProps }),
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marking:
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marking: tslib_1.__assign({}, c.props.marking)
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});
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};
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Object.defineProperty(ViewportScreenshotHelper.prototype, "previewPass", {
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cameraHelper: { axes: this.values.axes },
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transparentBackground: this.values.transparent,
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postprocessing:
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? { name: 'on', params:
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postprocessing: tslib_1.__assign(tslib_1.__assign({}, c.props.postprocessing), { occlusion: aoProps.name === 'on'
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? { name: 'on', params: tslib_1.__assign(tslib_1.__assign({}, aoProps.params), { samples: 128, resolutionScale: 1 }) }
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: aoProps }),
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marking:
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marking: tslib_1.__assign({}, c.props.marking)
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});
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return this._imagePass;
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}
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@@ -182,11 +182,11 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
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};
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ViewportScreenshotHelper.prototype.toggleAutocrop = function () {
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this.behaviors.cropParams.next(
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this.behaviors.cropParams.next(tslib_1.__assign(tslib_1.__assign({}, this.cropParams), { auto: false }));
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this.resetCrop();
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}
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else {
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this.behaviors.cropParams.next(
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this.behaviors.cropParams.next(tslib_1.__assign(tslib_1.__assign({}, this.cropParams), { auto: true }));
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}
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};
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Object.defineProperty(ViewportScreenshotHelper.prototype, "isFullFrame", {
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@@ -304,9 +304,9 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
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return { width: width, height: height, viewport: viewport };
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};
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ViewportScreenshotHelper.prototype.draw = function (ctx) {
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return
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+
return tslib_1.__awaiter(this, void 0, void 0, function () {
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var _a, width, height, viewport, imageData, canvas, canvasCtx;
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return
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+
return tslib_1.__generator(this, function (_b) {
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switch (_b.label) {
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case 0:
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312
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_a = this.getSizeAndViewport(), width = _a.width, height = _a.height, viewport = _a.viewport;
|
|
@@ -338,9 +338,9 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
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|
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this.plugin.log.error('clipboard.write not supported!');
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|
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339
|
return;
|
|
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|
}
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|
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|
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return mol_task_1.Task.create('Copy Image', function (ctx) { return
|
|
341
|
+
return mol_task_1.Task.create('Copy Image', function (ctx) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
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|
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var blob, item;
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|
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|
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return
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|
343
|
+
return tslib_1.__generator(this, function (_a) {
|
|
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344
|
switch (_a.label) {
|
|
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345
|
case 0: return [4 /*yield*/, this.draw(ctx)];
|
|
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|
case 1:
|
|
@@ -363,8 +363,8 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
|
|
|
363
363
|
};
|
|
364
364
|
ViewportScreenshotHelper.prototype.getImageDataUri = function () {
|
|
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365
|
var _this = this;
|
|
366
|
-
return this.plugin.runTask(mol_task_1.Task.create('Generate Image', function (ctx) { return
|
|
367
|
-
return
|
|
366
|
+
return this.plugin.runTask(mol_task_1.Task.create('Generate Image', function (ctx) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
|
|
367
|
+
return tslib_1.__generator(this, function (_a) {
|
|
368
368
|
switch (_a.label) {
|
|
369
369
|
case 0: return [4 /*yield*/, this.draw(ctx)];
|
|
370
370
|
case 1:
|
|
@@ -385,9 +385,9 @@ var ViewportScreenshotHelper = /** @class */ (function (_super) {
|
|
|
385
385
|
};
|
|
386
386
|
ViewportScreenshotHelper.prototype.downloadTask = function (filename) {
|
|
387
387
|
var _this = this;
|
|
388
|
-
return mol_task_1.Task.create('Download Image', function (ctx) { return
|
|
388
|
+
return mol_task_1.Task.create('Download Image', function (ctx) { return tslib_1.__awaiter(_this, void 0, void 0, function () {
|
|
389
389
|
var blob;
|
|
390
|
-
return
|
|
390
|
+
return tslib_1.__generator(this, function (_a) {
|
|
391
391
|
switch (_a.label) {
|
|
392
392
|
case 0: return [4 /*yield*/, this.draw(ctx)];
|
|
393
393
|
case 1:
|