molstar 2.4.0 → 2.4.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (305) hide show
  1. package/build/viewer/molstar.js +1 -1
  2. package/lib/apps/docking-viewer/viewport.d.ts +2 -2
  3. package/lib/cli/chem-comp-dict/util.d.ts +4 -4
  4. package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
  5. package/lib/commonjs/apps/viewer/index.d.ts +2 -2
  6. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +4 -4
  7. package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
  8. package/lib/commonjs/extensions/anvil/behavior.d.ts +2 -2
  9. package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
  10. package/lib/commonjs/extensions/cellpack/representation.d.ts +2 -2
  11. package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
  12. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
  13. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
  14. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  15. package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
  16. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +10 -10
  17. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
  18. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -1
  19. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
  20. package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -3
  21. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  22. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
  23. package/lib/commonjs/mol-geo/geometry/image/image.d.ts +3 -3
  24. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
  25. package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +18 -8
  26. package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
  27. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  28. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -3
  29. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  30. package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
  31. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  32. package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
  33. package/lib/commonjs/mol-gl/webgl/context.d.ts +1 -1
  34. package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
  35. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +2 -2
  36. package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
  37. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
  38. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +14 -14
  39. package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
  40. package/lib/commonjs/mol-model/loci.d.ts +20 -20
  41. package/lib/commonjs/mol-model/shape/shape.d.ts +1 -1
  42. package/lib/commonjs/mol-model/structure/query/utils/structure-distance.d.ts +54 -5
  43. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +2 -2
  44. package/lib/commonjs/mol-model/structure/structure/unit.d.ts +2 -2
  45. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +6 -6
  46. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +5 -5
  47. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +8 -8
  48. package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.d.ts +1 -1
  49. package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.js +1 -7
  50. package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.js.map +1 -1
  51. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +2 -2
  52. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +2 -2
  53. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +6 -6
  54. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +8 -8
  55. package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +1 -1
  56. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  57. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
  58. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +4 -4
  59. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +2 -2
  60. package/lib/commonjs/mol-plugin/commands.d.ts +2 -2
  61. package/lib/commonjs/mol-plugin/config.d.ts +1 -1
  62. package/lib/commonjs/mol-plugin/layout.d.ts +4 -4
  63. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -3
  64. package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +2 -2
  65. package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +3 -3
  66. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +5 -5
  67. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
  68. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +15 -15
  69. package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts +1 -1
  70. package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +10 -10
  71. package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts +5 -5
  72. package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts +1 -1
  73. package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts +1 -1
  74. package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +3 -3
  75. package/lib/commonjs/mol-plugin-state/transforms/data.d.ts +1 -1
  76. package/lib/commonjs/mol-plugin-state/transforms/model.d.ts +7 -7
  77. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +10 -10
  78. package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +2 -2
  79. package/lib/commonjs/mol-plugin-ui/sequence/polymer.d.ts +1 -1
  80. package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts +1 -1
  81. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -1
  82. package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -1
  83. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -1
  84. package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -1
  85. package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -1
  86. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +2 -2
  87. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -1
  88. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +2 -2
  89. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +12 -12
  90. package/lib/commonjs/mol-repr/structure/params.d.ts +11 -11
  91. package/lib/commonjs/mol-repr/structure/registry.d.ts +41 -41
  92. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +6 -6
  93. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +15 -15
  94. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +6 -6
  95. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +9 -9
  96. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +15 -15
  97. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +6 -6
  98. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +6 -6
  99. package/lib/commonjs/mol-repr/structure/representation/label.d.ts +9 -9
  100. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +18 -18
  101. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +6 -6
  102. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +6 -6
  103. package/lib/commonjs/mol-repr/structure/representation/point.d.ts +9 -9
  104. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +6 -6
  105. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +6 -6
  106. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +17 -17
  107. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +10 -10
  108. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +5 -5
  109. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +10 -10
  110. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +5 -5
  111. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +2 -2
  112. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +2 -2
  113. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +2 -2
  114. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +2 -2
  115. package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +3 -3
  116. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +4 -4
  117. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +2 -2
  118. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +4 -4
  119. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +8 -8
  120. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +2 -2
  121. package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +3 -3
  122. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +2 -2
  123. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +2 -2
  124. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +2 -2
  125. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +2 -2
  126. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +2 -2
  127. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +4 -4
  128. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +4 -4
  129. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +2 -2
  130. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +2 -2
  131. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +5 -5
  132. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +2 -2
  133. package/lib/commonjs/mol-repr/structure/visual/util/bond.d.ts +18 -18
  134. package/lib/commonjs/mol-repr/structure/visual/util/common.d.ts +2 -2
  135. package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +8 -8
  136. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +12 -12
  137. package/lib/commonjs/mol-repr/volume/registry.d.ts +8 -8
  138. package/lib/commonjs/mol-repr/volume/representation.d.ts +1 -1
  139. package/lib/commonjs/mol-repr/volume/slice.d.ts +12 -12
  140. package/lib/commonjs/mol-theme/color/element-symbol.d.ts +4 -4
  141. package/lib/commonjs/mol-theme/color.d.ts +2 -2
  142. package/lib/commonjs/mol-util/color/lists.d.ts +3 -3
  143. package/lib/commonjs/mol-util/color/names.d.ts +1 -1
  144. package/lib/commonjs/mol-util/color/palette.d.ts +1 -1
  145. package/lib/commonjs/mol-util/color/scale.d.ts +1 -1
  146. package/lib/commonjs/servers/model/config.d.ts +2 -2
  147. package/lib/extensions/anvil/behavior.d.ts +2 -2
  148. package/lib/extensions/anvil/representation.d.ts +5 -5
  149. package/lib/extensions/cellpack/representation.d.ts +2 -2
  150. package/lib/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
  151. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
  152. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
  153. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  154. package/lib/extensions/rcsb/validation-report/behavior.d.ts +3 -3
  155. package/lib/extensions/rcsb/validation-report/representation.d.ts +10 -10
  156. package/lib/mol-canvas3d/canvas3d.d.ts +4 -4
  157. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -1
  158. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -1
  159. package/lib/mol-data/int/impl/ordered-set.d.ts +3 -3
  160. package/lib/mol-geo/geometry/base.d.ts +3 -3
  161. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
  162. package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
  163. package/lib/mol-geo/geometry/image/image.d.ts +3 -3
  164. package/lib/mol-geo/geometry/lines/lines.d.ts +1 -1
  165. package/lib/mol-geo/geometry/mesh/builder/tube.js +19 -9
  166. package/lib/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
  167. package/lib/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  168. package/lib/mol-geo/geometry/points/points.d.ts +3 -3
  169. package/lib/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  170. package/lib/mol-geo/geometry/text/text.d.ts +1 -1
  171. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  172. package/lib/mol-gl/renderer.d.ts +2 -2
  173. package/lib/mol-io/common/typed-array.d.ts +1 -1
  174. package/lib/mol-io/reader/cif/schema/ccd.d.ts +2 -2
  175. package/lib/mol-io/reader/cif/schema/density-server.d.ts +3 -3
  176. package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
  177. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +14 -14
  178. package/lib/mol-io/reader/ply/schema.d.ts +1 -1
  179. package/lib/mol-model/loci.d.ts +20 -20
  180. package/lib/mol-model/shape/shape.d.ts +1 -1
  181. package/lib/mol-model/structure/structure/properties.d.ts +2 -2
  182. package/lib/mol-model/structure/structure/unit.d.ts +2 -2
  183. package/lib/mol-model-formats/shape/ply.d.ts +6 -6
  184. package/lib/mol-model-formats/structure/basic/schema.d.ts +5 -5
  185. package/lib/mol-model-formats/structure/common/component.d.ts +8 -8
  186. package/lib/mol-model-props/computed/interactions/hydrogen-bonds.d.ts +1 -1
  187. package/lib/mol-model-props/computed/interactions/hydrogen-bonds.js +1 -7
  188. package/lib/mol-model-props/computed/interactions/hydrogen-bonds.js.map +1 -1
  189. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +2 -2
  190. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +2 -2
  191. package/lib/mol-model-props/computed/representations/interactions.d.ts +6 -6
  192. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +8 -8
  193. package/lib/mol-plugin/behavior/behavior.d.ts +1 -1
  194. package/lib/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
  195. package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
  196. package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +4 -4
  197. package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +2 -2
  198. package/lib/mol-plugin/commands.d.ts +2 -2
  199. package/lib/mol-plugin/layout.d.ts +4 -4
  200. package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -3
  201. package/lib/mol-plugin/version.js +2 -2
  202. package/lib/mol-plugin-state/actions/structure.d.ts +1 -1
  203. package/lib/mol-plugin-state/animation/built-in/model-index.d.ts +3 -3
  204. package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +5 -5
  205. package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
  206. package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +15 -15
  207. package/lib/mol-plugin-state/builder/structure/representation.d.ts +1 -1
  208. package/lib/mol-plugin-state/formats/volume.d.ts +10 -10
  209. package/lib/mol-plugin-state/helpers/root-structure.d.ts +5 -5
  210. package/lib/mol-plugin-state/helpers/structure-component.d.ts +1 -1
  211. package/lib/mol-plugin-state/manager/interactivity.d.ts +1 -1
  212. package/lib/mol-plugin-state/manager/structure/component.d.ts +3 -3
  213. package/lib/mol-plugin-state/transforms/data.d.ts +1 -1
  214. package/lib/mol-plugin-state/transforms/model.d.ts +7 -7
  215. package/lib/mol-plugin-state/transforms/representation.d.ts +10 -10
  216. package/lib/mol-plugin-ui/structure/measurements.d.ts +1 -1
  217. package/lib/mol-plugin-ui/structure/selection.d.ts +1 -1
  218. package/lib/mol-repr/shape/loci/angle.d.ts +1 -1
  219. package/lib/mol-repr/shape/loci/common.d.ts +1 -1
  220. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -1
  221. package/lib/mol-repr/shape/loci/distance.d.ts +1 -1
  222. package/lib/mol-repr/shape/loci/label.d.ts +1 -1
  223. package/lib/mol-repr/shape/loci/orientation.d.ts +2 -2
  224. package/lib/mol-repr/shape/loci/plane.d.ts +1 -1
  225. package/lib/mol-repr/shape/model/unitcell.d.ts +2 -2
  226. package/lib/mol-repr/structure/complex-visual.d.ts +12 -12
  227. package/lib/mol-repr/structure/params.d.ts +11 -11
  228. package/lib/mol-repr/structure/registry.d.ts +41 -41
  229. package/lib/mol-repr/structure/representation/backbone.d.ts +6 -6
  230. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +15 -15
  231. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +6 -6
  232. package/lib/mol-repr/structure/representation/cartoon.d.ts +9 -9
  233. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +15 -15
  234. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +6 -6
  235. package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +6 -6
  236. package/lib/mol-repr/structure/representation/label.d.ts +9 -9
  237. package/lib/mol-repr/structure/representation/line.d.ts +18 -18
  238. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +6 -6
  239. package/lib/mol-repr/structure/representation/orientation.d.ts +6 -6
  240. package/lib/mol-repr/structure/representation/point.d.ts +9 -9
  241. package/lib/mol-repr/structure/representation/putty.d.ts +6 -6
  242. package/lib/mol-repr/structure/representation/spacefill.d.ts +6 -6
  243. package/lib/mol-repr/structure/units-visual.d.ts +17 -17
  244. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +10 -10
  245. package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +5 -5
  246. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +10 -10
  247. package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +5 -5
  248. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +2 -2
  249. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +2 -2
  250. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +2 -2
  251. package/lib/mol-repr/structure/visual/element-cross.d.ts +2 -2
  252. package/lib/mol-repr/structure/visual/element-point.d.ts +3 -3
  253. package/lib/mol-repr/structure/visual/element-sphere.d.ts +4 -4
  254. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +2 -2
  255. package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +4 -4
  256. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +8 -8
  257. package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +2 -2
  258. package/lib/mol-repr/structure/visual/label-text.d.ts +3 -3
  259. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +2 -2
  260. package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +2 -2
  261. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +2 -2
  262. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +2 -2
  263. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +2 -2
  264. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +4 -4
  265. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +4 -4
  266. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +2 -2
  267. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +2 -2
  268. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +5 -5
  269. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +2 -2
  270. package/lib/mol-repr/structure/visual/util/bond.d.ts +18 -18
  271. package/lib/mol-repr/structure/visual/util/common.d.ts +2 -2
  272. package/lib/mol-repr/volume/direct-volume.d.ts +8 -8
  273. package/lib/mol-repr/volume/isosurface.d.ts +12 -12
  274. package/lib/mol-repr/volume/registry.d.ts +8 -8
  275. package/lib/mol-repr/volume/representation.d.ts +1 -1
  276. package/lib/mol-repr/volume/slice.d.ts +12 -12
  277. package/lib/mol-theme/color/element-symbol.d.ts +4 -4
  278. package/lib/mol-theme/color.d.ts +2 -2
  279. package/lib/mol-util/color/names.d.ts +1 -1
  280. package/lib/mol-util/color/palette.d.ts +1 -1
  281. package/lib/mol-util/color/scale.d.ts +1 -1
  282. package/lib/servers/model/config.d.ts +2 -2
  283. package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
  284. package/package.json +1 -1
  285. package/lib/commonjs/mol-repr/structure/visual/util/color.d.ts +0 -24
  286. package/lib/commonjs/mol-repr/structure/visual/util/color.js +0 -100
  287. package/lib/commonjs/mol-repr/structure/visual/util/color.js.map +0 -1
  288. package/lib/mol-gl/_spec/shader.spec.d.ts +0 -0
  289. package/lib/mol-gl/_spec/shader.spec.js +0 -2
  290. package/lib/mol-gl/_spec/shader.spec.js.map +0 -1
  291. package/lib/mol-gl/compute/copy.d.ts +0 -20
  292. package/lib/mol-gl/compute/copy.js +0 -24
  293. package/lib/mol-gl/compute/copy.js.map +0 -1
  294. package/lib/mol-repr/structure/visual/orientation-axes-mesh.d.ts +0 -35
  295. package/lib/mol-repr/structure/visual/orientation-axes-mesh.js +0 -43
  296. package/lib/mol-repr/structure/visual/orientation-axes-mesh.js.map +0 -1
  297. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.d.ts +0 -31
  298. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.js +0 -48
  299. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.js.map +0 -1
  300. package/lib/mol-repr/structure/visual/util/color.d.ts +0 -24
  301. package/lib/mol-repr/structure/visual/util/color.js +0 -94
  302. package/lib/mol-repr/structure/visual/util/color.js.map +0 -1
  303. package/lib/mol-repr/structure/visual/util/orientation.d.ts +0 -17
  304. package/lib/mol-repr/structure/visual/util/orientation.js +0 -71
  305. package/lib/mol-repr/structure/visual/util/orientation.js.map +0 -1
@@ -14,13 +14,13 @@ export declare const ElementSphereParams: {
14
14
  ignoreHydrogens: PD.BooleanParam;
15
15
  traceOnly: PD.BooleanParam;
16
16
  tryUseImpostor: PD.BooleanParam;
17
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
17
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
18
18
  includeParent: PD.BooleanParam;
19
19
  doubleSided: PD.BooleanParam;
20
20
  ignoreLight: PD.BooleanParam;
21
21
  xrayShaded: PD.BooleanParam;
22
22
  alpha: PD.Numeric;
23
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
23
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
24
24
  flipSided: PD.BooleanParam;
25
25
  flatShaded: PD.BooleanParam;
26
26
  };
@@ -31,13 +31,13 @@ export declare function ElementSphereVisual(materialId: number, structure: Struc
31
31
  ignoreHydrogens: PD.BooleanParam;
32
32
  traceOnly: PD.BooleanParam;
33
33
  tryUseImpostor: PD.BooleanParam;
34
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
34
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
35
35
  includeParent: PD.BooleanParam;
36
36
  doubleSided: PD.BooleanParam;
37
37
  ignoreLight: PD.BooleanParam;
38
38
  xrayShaded: PD.BooleanParam;
39
39
  alpha: PD.Numeric;
40
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
40
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
41
41
  flipSided: PD.BooleanParam;
42
42
  flatShaded: PD.BooleanParam;
43
43
  }>;
@@ -13,7 +13,7 @@ export declare const EllipsoidMeshParams: {
13
13
  sizeFactor: PD.Numeric;
14
14
  detail: PD.Numeric;
15
15
  ignoreHydrogens: PD.BooleanParam;
16
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
16
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
17
17
  includeParent: PD.BooleanParam;
18
18
  doubleSided: PD.BooleanParam;
19
19
  flipSided: PD.BooleanParam;
@@ -21,7 +21,7 @@ export declare const EllipsoidMeshParams: {
21
21
  ignoreLight: PD.BooleanParam;
22
22
  xrayShaded: PD.BooleanParam;
23
23
  alpha: PD.Numeric;
24
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
24
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
25
25
  };
26
26
  export declare type EllipsoidMeshParams = typeof EllipsoidMeshParams;
27
27
  export declare function EllipsoidMeshVisual(materialId: number): UnitsVisual<EllipsoidMeshParams>;
@@ -13,7 +13,7 @@ export declare const GaussianDensityVolumeParams: {
13
13
  resolution: PD.Numeric;
14
14
  radiusOffset: PD.Numeric;
15
15
  smoothness: PD.Numeric;
16
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
16
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
17
17
  doubleSided: PD.BooleanParam;
18
18
  flipSided: PD.BooleanParam;
19
19
  flatShaded: PD.BooleanParam;
@@ -38,7 +38,7 @@ export declare const GaussianDensityVolumeParams: {
38
38
  stepsPerCell: PD.Numeric;
39
39
  jumpLength: PD.Numeric;
40
40
  alpha: PD.Numeric;
41
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
41
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
42
42
  };
43
43
  export declare type GaussianDensityVolumeParams = typeof GaussianDensityVolumeParams;
44
44
  export declare function GaussianDensityVolumeVisual(materialId: number): ComplexVisual<GaussianDensityVolumeParams>;
@@ -49,7 +49,7 @@ export declare const UnitsGaussianDensityVolumeParams: {
49
49
  resolution: PD.Numeric;
50
50
  radiusOffset: PD.Numeric;
51
51
  smoothness: PD.Numeric;
52
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
52
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
53
53
  doubleSided: PD.BooleanParam;
54
54
  flipSided: PD.BooleanParam;
55
55
  flatShaded: PD.BooleanParam;
@@ -74,7 +74,7 @@ export declare const UnitsGaussianDensityVolumeParams: {
74
74
  stepsPerCell: PD.Numeric;
75
75
  jumpLength: PD.Numeric;
76
76
  alpha: PD.Numeric;
77
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
77
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
78
78
  };
79
79
  export declare type UnitsGaussianDensityVolumeParams = typeof UnitsGaussianDensityVolumeParams;
80
80
  export declare function UnitsGaussianDensityVolumeVisual(materialId: number): UnitsVisual<UnitsGaussianDensityVolumeParams>;
@@ -20,14 +20,14 @@ export declare const GaussianSurfaceMeshParams: {
20
20
  resolution: PD.Numeric;
21
21
  radiusOffset: PD.Numeric;
22
22
  smoothness: PD.Numeric;
23
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
23
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
24
24
  doubleSided: PD.BooleanParam;
25
25
  flipSided: PD.BooleanParam;
26
26
  flatShaded: PD.BooleanParam;
27
27
  ignoreLight: PD.BooleanParam;
28
28
  xrayShaded: PD.BooleanParam;
29
29
  alpha: PD.Numeric;
30
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
30
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
31
31
  };
32
32
  export declare type GaussianSurfaceMeshParams = typeof GaussianSurfaceMeshParams;
33
33
  export declare const StructureGaussianSurfaceMeshParams: {
@@ -42,14 +42,14 @@ export declare const StructureGaussianSurfaceMeshParams: {
42
42
  resolution: PD.Numeric;
43
43
  radiusOffset: PD.Numeric;
44
44
  smoothness: PD.Numeric;
45
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
45
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
46
46
  doubleSided: PD.BooleanParam;
47
47
  flipSided: PD.BooleanParam;
48
48
  flatShaded: PD.BooleanParam;
49
49
  ignoreLight: PD.BooleanParam;
50
50
  xrayShaded: PD.BooleanParam;
51
51
  alpha: PD.Numeric;
52
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
52
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
53
53
  };
54
54
  export declare type StructureGaussianSurfaceMeshParams = typeof StructureGaussianSurfaceMeshParams;
55
55
  export declare function GaussianSurfaceVisual(materialId: number, structure: Structure, props: PD.Values<GaussianSurfaceMeshParams>, webgl?: WebGLContext): UnitsVisual<{
@@ -64,14 +64,14 @@ export declare function GaussianSurfaceVisual(materialId: number, structure: Str
64
64
  resolution: PD.Numeric;
65
65
  radiusOffset: PD.Numeric;
66
66
  smoothness: PD.Numeric;
67
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
67
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
68
68
  doubleSided: PD.BooleanParam;
69
69
  flipSided: PD.BooleanParam;
70
70
  flatShaded: PD.BooleanParam;
71
71
  ignoreLight: PD.BooleanParam;
72
72
  xrayShaded: PD.BooleanParam;
73
73
  alpha: PD.Numeric;
74
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
74
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
75
75
  }>;
76
76
  export declare function StructureGaussianSurfaceVisual(materialId: number, structure: Structure, props: PD.Values<StructureGaussianSurfaceMeshParams>, webgl?: WebGLContext): ComplexVisual<{
77
77
  ignoreHydrogens: PD.BooleanParam;
@@ -85,14 +85,14 @@ export declare function StructureGaussianSurfaceVisual(materialId: number, struc
85
85
  resolution: PD.Numeric;
86
86
  radiusOffset: PD.Numeric;
87
87
  smoothness: PD.Numeric;
88
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
88
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
89
89
  doubleSided: PD.BooleanParam;
90
90
  flipSided: PD.BooleanParam;
91
91
  flatShaded: PD.BooleanParam;
92
92
  ignoreLight: PD.BooleanParam;
93
93
  xrayShaded: PD.BooleanParam;
94
94
  alpha: PD.Numeric;
95
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
95
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
96
96
  }>;
97
97
  export declare function GaussianSurfaceMeshVisual(materialId: number): UnitsVisual<GaussianSurfaceMeshParams>;
98
98
  export declare function StructureGaussianSurfaceMeshVisual(materialId: number): ComplexVisual<StructureGaussianSurfaceMeshParams>;
@@ -14,9 +14,9 @@ export declare const GaussianWireframeParams: {
14
14
  resolution: PD.Numeric;
15
15
  radiusOffset: PD.Numeric;
16
16
  smoothness: PD.Numeric;
17
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
17
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
18
18
  alpha: PD.Numeric;
19
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
19
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
20
20
  };
21
21
  export declare type GaussianWireframeParams = typeof GaussianWireframeParams;
22
22
  export declare function GaussianWireframeVisual(materialId: number): UnitsVisual<GaussianWireframeParams>;
@@ -11,11 +11,11 @@ export declare const LabelTextParams: {
11
11
  backgroundMargin: PD.Numeric;
12
12
  backgroundColor: PD.Color;
13
13
  backgroundOpacity: PD.Numeric;
14
- level: PD.Select<"residue" | "chain" | "element">;
14
+ level: PD.Select<"element" | "residue" | "chain">;
15
15
  chainScale: PD.Numeric;
16
16
  residueScale: PD.Numeric;
17
17
  elementScale: PD.Numeric;
18
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
18
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
19
19
  includeParent: PD.BooleanParam;
20
20
  sizeFactor: PD.Numeric;
21
21
  borderWidth: PD.Numeric;
@@ -33,7 +33,7 @@ export declare const LabelTextParams: {
33
33
  fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
34
34
  fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
35
35
  alpha: PD.Numeric;
36
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
36
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
37
37
  };
38
38
  export declare type LabelTextParams = typeof LabelTextParams;
39
39
  export declare type LabelTextProps = PD.Values<LabelTextParams>;
@@ -16,14 +16,14 @@ export declare const MolecularSurfaceMeshParams: {
16
16
  probeRadius: PD.Numeric;
17
17
  resolution: PD.Numeric;
18
18
  probePositions: PD.Numeric;
19
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
19
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
20
20
  doubleSided: PD.BooleanParam;
21
21
  flipSided: PD.BooleanParam;
22
22
  flatShaded: PD.BooleanParam;
23
23
  ignoreLight: PD.BooleanParam;
24
24
  xrayShaded: PD.BooleanParam;
25
25
  alpha: PD.Numeric;
26
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
26
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
27
27
  };
28
28
  export declare type MolecularSurfaceMeshParams = typeof MolecularSurfaceMeshParams;
29
29
  export declare type MolecularSurfaceMeshProps = PD.Values<MolecularSurfaceMeshParams>;
@@ -13,10 +13,10 @@ export declare const MolecularSurfaceWireframeParams: {
13
13
  probeRadius: PD.Numeric;
14
14
  resolution: PD.Numeric;
15
15
  probePositions: PD.Numeric;
16
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
16
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
17
17
  lineSizeAttenuation: PD.BooleanParam;
18
18
  alpha: PD.Numeric;
19
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
19
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
20
20
  };
21
21
  export declare type MolecularSurfaceWireframeParams = typeof MolecularSurfaceWireframeParams;
22
22
  export declare function MolecularSurfaceWireframeVisual(materialId: number): UnitsVisual<MolecularSurfaceWireframeParams>;
@@ -17,7 +17,7 @@ export declare type NucleotideBlockMeshProps = typeof DefaultNucleotideBlockMesh
17
17
  export declare const NucleotideBlockParams: {
18
18
  sizeFactor: PD.Numeric;
19
19
  radialSegments: PD.Numeric;
20
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
20
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
21
21
  includeParent: PD.BooleanParam;
22
22
  doubleSided: PD.BooleanParam;
23
23
  flipSided: PD.BooleanParam;
@@ -25,7 +25,7 @@ export declare const NucleotideBlockParams: {
25
25
  ignoreLight: PD.BooleanParam;
26
26
  xrayShaded: PD.BooleanParam;
27
27
  alpha: PD.Numeric;
28
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
28
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
29
29
  };
30
30
  export declare type NucleotideBlockParams = typeof NucleotideBlockParams;
31
31
  export declare function NucleotideBlockVisual(materialId: number): UnitsVisual<NucleotideBlockParams>;
@@ -20,7 +20,7 @@ export declare const NucleotideRingParams: {
20
20
  sizeFactor: PD.Numeric;
21
21
  radialSegments: PD.Numeric;
22
22
  detail: PD.Numeric;
23
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
23
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
24
24
  includeParent: PD.BooleanParam;
25
25
  doubleSided: PD.BooleanParam;
26
26
  flipSided: PD.BooleanParam;
@@ -28,7 +28,7 @@ export declare const NucleotideRingParams: {
28
28
  ignoreLight: PD.BooleanParam;
29
29
  xrayShaded: PD.BooleanParam;
30
30
  alpha: PD.Numeric;
31
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
31
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
32
32
  };
33
33
  export declare type NucleotideRingParams = typeof NucleotideRingParams;
34
34
  export declare function NucleotideRingVisual(materialId: number): UnitsVisual<NucleotideRingParams>;
@@ -12,7 +12,7 @@ import { Mesh } from '../../../mol-geo/geometry/mesh/mesh';
12
12
  export declare const OrientationEllipsoidMeshParams: {
13
13
  sizeFactor: PD.Numeric;
14
14
  detail: PD.Numeric;
15
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
15
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
16
16
  includeParent: PD.BooleanParam;
17
17
  doubleSided: PD.BooleanParam;
18
18
  flipSided: PD.BooleanParam;
@@ -20,7 +20,7 @@ export declare const OrientationEllipsoidMeshParams: {
20
20
  ignoreLight: PD.BooleanParam;
21
21
  xrayShaded: PD.BooleanParam;
22
22
  alpha: PD.Numeric;
23
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
23
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
24
24
  };
25
25
  export declare type OrientationEllipsoidMeshParams = typeof OrientationEllipsoidMeshParams;
26
26
  export declare function OrientationEllipsoidMeshVisual(materialId: number): UnitsVisual<OrientationEllipsoidMeshParams>;
@@ -11,14 +11,14 @@ export declare const PolymerBackboneCylinderParams: {
11
11
  sizeFactor: PD.Numeric;
12
12
  radialSegments: PD.Numeric;
13
13
  tryUseImpostor: PD.BooleanParam;
14
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
14
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
15
15
  includeParent: PD.BooleanParam;
16
16
  sizeAspectRatio: PD.Numeric;
17
17
  doubleSided: PD.BooleanParam;
18
18
  ignoreLight: PD.BooleanParam;
19
19
  xrayShaded: PD.BooleanParam;
20
20
  alpha: PD.Numeric;
21
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
21
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
22
22
  flipSided: PD.BooleanParam;
23
23
  flatShaded: PD.BooleanParam;
24
24
  };
@@ -27,14 +27,14 @@ export declare function PolymerBackboneCylinderVisual(materialId: number, struct
27
27
  sizeFactor: PD.Numeric;
28
28
  radialSegments: PD.Numeric;
29
29
  tryUseImpostor: PD.BooleanParam;
30
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
30
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
31
31
  includeParent: PD.BooleanParam;
32
32
  sizeAspectRatio: PD.Numeric;
33
33
  doubleSided: PD.BooleanParam;
34
34
  ignoreLight: PD.BooleanParam;
35
35
  xrayShaded: PD.BooleanParam;
36
36
  alpha: PD.Numeric;
37
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
37
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
38
38
  flipSided: PD.BooleanParam;
39
39
  flatShaded: PD.BooleanParam;
40
40
  }>;
@@ -11,13 +11,13 @@ export declare const PolymerBackboneSphereParams: {
11
11
  sizeFactor: PD.Numeric;
12
12
  detail: PD.Numeric;
13
13
  tryUseImpostor: PD.BooleanParam;
14
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
14
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
15
15
  includeParent: PD.BooleanParam;
16
16
  doubleSided: PD.BooleanParam;
17
17
  ignoreLight: PD.BooleanParam;
18
18
  xrayShaded: PD.BooleanParam;
19
19
  alpha: PD.Numeric;
20
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
20
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
21
21
  flipSided: PD.BooleanParam;
22
22
  flatShaded: PD.BooleanParam;
23
23
  };
@@ -26,13 +26,13 @@ export declare function PolymerBackboneSphereVisual(materialId: number, structur
26
26
  sizeFactor: PD.Numeric;
27
27
  detail: PD.Numeric;
28
28
  tryUseImpostor: PD.BooleanParam;
29
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
29
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
30
30
  includeParent: PD.BooleanParam;
31
31
  doubleSided: PD.BooleanParam;
32
32
  ignoreLight: PD.BooleanParam;
33
33
  xrayShaded: PD.BooleanParam;
34
34
  alpha: PD.Numeric;
35
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
35
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
36
36
  flipSided: PD.BooleanParam;
37
37
  flatShaded: PD.BooleanParam;
38
38
  }>;
@@ -14,7 +14,7 @@ export declare const DefaultPolymerDirectionWedgeProps: PD.Values<{
14
14
  export declare type PolymerDirectionWedgeProps = typeof DefaultPolymerDirectionWedgeProps;
15
15
  export declare const PolymerDirectionParams: {
16
16
  sizeFactor: PD.Numeric;
17
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
17
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
18
18
  includeParent: PD.BooleanParam;
19
19
  doubleSided: PD.BooleanParam;
20
20
  flipSided: PD.BooleanParam;
@@ -22,7 +22,7 @@ export declare const PolymerDirectionParams: {
22
22
  ignoreLight: PD.BooleanParam;
23
23
  xrayShaded: PD.BooleanParam;
24
24
  alpha: PD.Numeric;
25
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
25
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
26
26
  };
27
27
  export declare type PolymerDirectionParams = typeof PolymerDirectionParams;
28
28
  export declare function PolymerDirectionVisual(materialId: number): UnitsVisual<PolymerDirectionParams>;
@@ -17,7 +17,7 @@ export declare type PolymerGapCylinderProps = typeof DefaultPolymerGapCylinderPr
17
17
  export declare const PolymerGapParams: {
18
18
  sizeFactor: PD.Numeric;
19
19
  radialSegments: PD.Numeric;
20
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
20
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
21
21
  includeParent: PD.BooleanParam;
22
22
  doubleSided: PD.BooleanParam;
23
23
  flipSided: PD.BooleanParam;
@@ -25,7 +25,7 @@ export declare const PolymerGapParams: {
25
25
  ignoreLight: PD.BooleanParam;
26
26
  xrayShaded: PD.BooleanParam;
27
27
  alpha: PD.Numeric;
28
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
28
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
29
29
  };
30
30
  export declare type PolymerGapParams = typeof PolymerGapParams;
31
31
  export declare function PolymerGapVisual(materialId: number): UnitsVisual<PolymerGapParams>;
@@ -10,7 +10,7 @@ export declare const PolymerTraceMeshParams: {
10
10
  aspectRatio: PD.Numeric;
11
11
  arrowFactor: PD.Numeric;
12
12
  tubularHelices: PD.BooleanParam;
13
- helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
13
+ helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
14
14
  detail: PD.Numeric;
15
15
  linearSegments: PD.Numeric;
16
16
  radialSegments: PD.Numeric;
@@ -20,7 +20,7 @@ export declare const DefaultPolymerTraceMeshProps: PD.Values<{
20
20
  aspectRatio: PD.Numeric;
21
21
  arrowFactor: PD.Numeric;
22
22
  tubularHelices: PD.BooleanParam;
23
- helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
23
+ helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
24
24
  detail: PD.Numeric;
25
25
  linearSegments: PD.Numeric;
26
26
  radialSegments: PD.Numeric;
@@ -31,11 +31,11 @@ export declare const PolymerTraceParams: {
31
31
  aspectRatio: PD.Numeric;
32
32
  arrowFactor: PD.Numeric;
33
33
  tubularHelices: PD.BooleanParam;
34
- helixProfile: PD.Select<"elliptical" | "rounded" | "square">;
34
+ helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
35
35
  detail: PD.Numeric;
36
36
  linearSegments: PD.Numeric;
37
37
  radialSegments: PD.Numeric;
38
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
38
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
39
39
  includeParent: PD.BooleanParam;
40
40
  doubleSided: PD.BooleanParam;
41
41
  flipSided: PD.BooleanParam;
@@ -43,7 +43,7 @@ export declare const PolymerTraceParams: {
43
43
  ignoreLight: PD.BooleanParam;
44
44
  xrayShaded: PD.BooleanParam;
45
45
  alpha: PD.Numeric;
46
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
46
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
47
47
  };
48
48
  export declare type PolymerTraceParams = typeof PolymerTraceParams;
49
49
  export declare function PolymerTraceVisual(materialId: number): UnitsVisual<PolymerTraceParams>;
@@ -23,7 +23,7 @@ export declare const PolymerTubeParams: {
23
23
  detail: PD.Numeric;
24
24
  linearSegments: PD.Numeric;
25
25
  radialSegments: PD.Numeric;
26
- unitKinds: PD.MultiSelect<"atomic" | "spheres" | "gaussians">;
26
+ unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
27
27
  includeParent: PD.BooleanParam;
28
28
  doubleSided: PD.BooleanParam;
29
29
  flipSided: PD.BooleanParam;
@@ -31,7 +31,7 @@ export declare const PolymerTubeParams: {
31
31
  ignoreLight: PD.BooleanParam;
32
32
  xrayShaded: PD.BooleanParam;
33
33
  alpha: PD.Numeric;
34
- quality: PD.Select<"custom" | "auto" | "highest" | "higher" | "high" | "medium" | "low" | "lower" | "lowest">;
34
+ quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
35
35
  };
36
36
  export declare type PolymerTubeParams = typeof PolymerTubeParams;
37
37
  export declare function PolymerTubeVisual(materialId: number): UnitsVisual<PolymerTubeParams>;
@@ -12,27 +12,27 @@ import { Loci } from '../../../../mol-model/loci';
12
12
  import { Interval } from '../../../../mol-data/int';
13
13
  import { StructureGroup } from './common';
14
14
  export declare const BondParams: {
15
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
16
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
15
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
16
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
17
17
  ignoreHydrogens: PD.BooleanParam;
18
18
  aromaticBonds: PD.BooleanParam;
19
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
19
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
20
20
  };
21
21
  export declare const DefaultBondProps: PD.Values<{
22
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
23
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
22
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
23
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
24
24
  ignoreHydrogens: PD.BooleanParam;
25
25
  aromaticBonds: PD.BooleanParam;
26
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
26
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
27
27
  }>;
28
28
  export declare type BondProps = typeof DefaultBondProps;
29
29
  export declare const BondCylinderParams: {
30
30
  adjustCylinderLength: PD.BooleanParam;
31
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
32
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
31
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
32
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
33
33
  ignoreHydrogens: PD.BooleanParam;
34
34
  aromaticBonds: PD.BooleanParam;
35
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
35
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
36
36
  linkScale: PD.Numeric;
37
37
  linkSpacing: PD.Numeric;
38
38
  linkCap: PD.BooleanParam;
@@ -47,11 +47,11 @@ export declare const BondCylinderParams: {
47
47
  };
48
48
  export declare const DefaultBondCylinderProps: PD.Values<{
49
49
  adjustCylinderLength: PD.BooleanParam;
50
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
51
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
50
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
51
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
52
52
  ignoreHydrogens: PD.BooleanParam;
53
53
  aromaticBonds: PD.BooleanParam;
54
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
54
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
55
55
  linkScale: PD.Numeric;
56
56
  linkSpacing: PD.Numeric;
57
57
  linkCap: PD.BooleanParam;
@@ -66,22 +66,22 @@ export declare const DefaultBondCylinderProps: PD.Values<{
66
66
  }>;
67
67
  export declare type BondCylinderProps = typeof DefaultBondCylinderProps;
68
68
  export declare const BondLineParams: {
69
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
70
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
69
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
70
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
71
71
  ignoreHydrogens: PD.BooleanParam;
72
72
  aromaticBonds: PD.BooleanParam;
73
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
73
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
74
74
  linkScale: PD.Numeric;
75
75
  linkSpacing: PD.Numeric;
76
76
  aromaticDashCount: PD.Numeric;
77
77
  dashCount: PD.Numeric;
78
78
  };
79
79
  export declare const DefaultBondLineProps: PD.Values<{
80
- includeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
81
- excludeTypes: PD.MultiSelect<"covalent" | "computed" | "aromatic" | "metal-coordination" | "hydrogen-bond" | "disulfide">;
80
+ includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
81
+ excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
82
82
  ignoreHydrogens: PD.BooleanParam;
83
83
  aromaticBonds: PD.BooleanParam;
84
- multipleBonds: PD.Select<"off" | "symmetric" | "offset">;
84
+ multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
85
85
  linkScale: PD.Numeric;
86
86
  linkSpacing: PD.Numeric;
87
87
  aromaticDashCount: PD.Numeric;
@@ -29,7 +29,7 @@ export declare const UnitKindInfo: {
29
29
  gaussians: {};
30
30
  };
31
31
  export declare type UnitKind = keyof typeof UnitKindInfo;
32
- export declare const UnitKindOptions: ["atomic" | "spheres" | "gaussians", string][];
32
+ export declare const UnitKindOptions: ["spheres" | "gaussians" | "atomic", string][];
33
33
  export declare function includesUnitKind(unitKinds: UnitKind[], unit: Unit): boolean;
34
34
  export declare function getVolumeSliceInfo(box: Box3D, resolution: number, maxCells?: number): {
35
35
  area: number;
@@ -48,7 +48,7 @@ export declare function ensureReasonableResolution<T>(box: Box3D, props: {
48
48
  } & T & {
49
49
  resolution: number;
50
50
  };
51
- export declare function getConformation(unit: Unit): import("../../../../mol-model/structure/model/properties/coarse").CoarseSphereConformation | import("../../../../mol-model/structure/model/properties/coarse").CoarseGaussianConformation | import("../../../../mol-model/structure/model/properties/atomic").AtomicConformation;
51
+ export declare function getConformation(unit: Unit): import("../../../../mol-model/structure/model/properties/atomic").AtomicConformation | import("../../../../mol-model/structure/model/properties/coarse").CoarseSphereConformation | import("../../../../mol-model/structure/model/properties/coarse").CoarseGaussianConformation;
52
52
  export declare const CommonSurfaceParams: {
53
53
  ignoreHydrogens: PD.BooleanParam;
54
54
  traceOnly: PD.BooleanParam;