molstar 2.4.0 → 2.4.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/build/viewer/molstar.js +1 -1
- package/lib/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/commonjs/apps/docking-viewer/viewport.d.ts +2 -2
- package/lib/commonjs/apps/viewer/index.d.ts +2 -2
- package/lib/commonjs/cli/chem-comp-dict/util.d.ts +4 -4
- package/lib/commonjs/extensions/alpha-orbitals/transforms.d.ts +1 -1
- package/lib/commonjs/extensions/anvil/behavior.d.ts +2 -2
- package/lib/commonjs/extensions/anvil/representation.d.ts +5 -5
- package/lib/commonjs/extensions/cellpack/representation.d.ts +2 -2
- package/lib/commonjs/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
- package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
- package/lib/commonjs/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +10 -10
- package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -1
- package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/base.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/image/image.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +18 -8
- package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/points/points.d.ts +3 -3
- package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/text/text.d.ts +1 -1
- package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
- package/lib/commonjs/mol-gl/renderer.d.ts +2 -2
- package/lib/commonjs/mol-gl/webgl/context.d.ts +1 -1
- package/lib/commonjs/mol-io/common/typed-array.d.ts +1 -1
- package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +2 -2
- package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
- package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +14 -14
- package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
- package/lib/commonjs/mol-model/loci.d.ts +20 -20
- package/lib/commonjs/mol-model/shape/shape.d.ts +1 -1
- package/lib/commonjs/mol-model/structure/query/utils/structure-distance.d.ts +54 -5
- package/lib/commonjs/mol-model/structure/structure/properties.d.ts +2 -2
- package/lib/commonjs/mol-model/structure/structure/unit.d.ts +2 -2
- package/lib/commonjs/mol-model-formats/shape/ply.d.ts +6 -6
- package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +5 -5
- package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +8 -8
- package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.d.ts +1 -1
- package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.js +1 -7
- package/lib/commonjs/mol-model-props/computed/interactions/hydrogen-bonds.js.map +1 -1
- package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +2 -2
- package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +2 -2
- package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +6 -6
- package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +8 -8
- package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
- package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +4 -4
- package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +2 -2
- package/lib/commonjs/mol-plugin/commands.d.ts +2 -2
- package/lib/commonjs/mol-plugin/config.d.ts +1 -1
- package/lib/commonjs/mol-plugin/layout.d.ts +4 -4
- package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/actions/structure.d.ts +2 -2
- package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +15 -15
- package/lib/commonjs/mol-plugin-state/builder/structure/representation.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +10 -10
- package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts +5 -5
- package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/manager/structure/component.d.ts +3 -3
- package/lib/commonjs/mol-plugin-state/transforms/data.d.ts +1 -1
- package/lib/commonjs/mol-plugin-state/transforms/model.d.ts +7 -7
- package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +10 -10
- package/lib/commonjs/mol-plugin-ui/controls/parameters.d.ts +2 -2
- package/lib/commonjs/mol-plugin-ui/sequence/polymer.d.ts +1 -1
- package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/common.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/distance.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/label.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +2 -2
- package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -1
- package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +12 -12
- package/lib/commonjs/mol-repr/structure/params.d.ts +11 -11
- package/lib/commonjs/mol-repr/structure/registry.d.ts +41 -41
- package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +15 -15
- package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +9 -9
- package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +15 -15
- package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/label.d.ts +9 -9
- package/lib/commonjs/mol-repr/structure/representation/line.d.ts +18 -18
- package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/point.d.ts +9 -9
- package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +6 -6
- package/lib/commonjs/mol-repr/structure/units-visual.d.ts +17 -17
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +10 -10
- package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +5 -5
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +10 -10
- package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +5 -5
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/element-point.d.ts +3 -3
- package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +4 -4
- package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +4 -4
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +8 -8
- package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/label-text.d.ts +3 -3
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +4 -4
- package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +4 -4
- package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +5 -5
- package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +2 -2
- package/lib/commonjs/mol-repr/structure/visual/util/bond.d.ts +18 -18
- package/lib/commonjs/mol-repr/structure/visual/util/common.d.ts +2 -2
- package/lib/commonjs/mol-repr/volume/direct-volume.d.ts +8 -8
- package/lib/commonjs/mol-repr/volume/isosurface.d.ts +12 -12
- package/lib/commonjs/mol-repr/volume/registry.d.ts +8 -8
- package/lib/commonjs/mol-repr/volume/representation.d.ts +1 -1
- package/lib/commonjs/mol-repr/volume/slice.d.ts +12 -12
- package/lib/commonjs/mol-theme/color/element-symbol.d.ts +4 -4
- package/lib/commonjs/mol-theme/color.d.ts +2 -2
- package/lib/commonjs/mol-util/color/lists.d.ts +3 -3
- package/lib/commonjs/mol-util/color/names.d.ts +1 -1
- package/lib/commonjs/mol-util/color/palette.d.ts +1 -1
- package/lib/commonjs/mol-util/color/scale.d.ts +1 -1
- package/lib/commonjs/servers/model/config.d.ts +2 -2
- package/lib/extensions/anvil/behavior.d.ts +2 -2
- package/lib/extensions/anvil/representation.d.ts +5 -5
- package/lib/extensions/cellpack/representation.d.ts +2 -2
- package/lib/extensions/dnatco/confal-pyramids/behavior.d.ts +1 -1
- package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +6 -6
- package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +6 -6
- package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
- package/lib/extensions/rcsb/validation-report/behavior.d.ts +3 -3
- package/lib/extensions/rcsb/validation-report/representation.d.ts +10 -10
- package/lib/mol-canvas3d/canvas3d.d.ts +4 -4
- package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -1
- package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -1
- package/lib/mol-data/int/impl/ordered-set.d.ts +3 -3
- package/lib/mol-geo/geometry/base.d.ts +3 -3
- package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +1 -1
- package/lib/mol-geo/geometry/direct-volume/direct-volume.d.ts +1 -1
- package/lib/mol-geo/geometry/image/image.d.ts +3 -3
- package/lib/mol-geo/geometry/lines/lines.d.ts +1 -1
- package/lib/mol-geo/geometry/mesh/builder/tube.js +19 -9
- package/lib/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
- package/lib/mol-geo/geometry/mesh/mesh.d.ts +1 -1
- package/lib/mol-geo/geometry/points/points.d.ts +3 -3
- package/lib/mol-geo/geometry/spheres/spheres.d.ts +1 -1
- package/lib/mol-geo/geometry/text/text.d.ts +1 -1
- package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
- package/lib/mol-gl/renderer.d.ts +2 -2
- package/lib/mol-io/common/typed-array.d.ts +1 -1
- package/lib/mol-io/reader/cif/schema/ccd.d.ts +2 -2
- package/lib/mol-io/reader/cif/schema/density-server.d.ts +3 -3
- package/lib/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
- package/lib/mol-io/reader/cif/schema/mmcif.d.ts +14 -14
- package/lib/mol-io/reader/ply/schema.d.ts +1 -1
- package/lib/mol-model/loci.d.ts +20 -20
- package/lib/mol-model/shape/shape.d.ts +1 -1
- package/lib/mol-model/structure/structure/properties.d.ts +2 -2
- package/lib/mol-model/structure/structure/unit.d.ts +2 -2
- package/lib/mol-model-formats/shape/ply.d.ts +6 -6
- package/lib/mol-model-formats/structure/basic/schema.d.ts +5 -5
- package/lib/mol-model-formats/structure/common/component.d.ts +8 -8
- package/lib/mol-model-props/computed/interactions/hydrogen-bonds.d.ts +1 -1
- package/lib/mol-model-props/computed/interactions/hydrogen-bonds.js +1 -7
- package/lib/mol-model-props/computed/interactions/hydrogen-bonds.js.map +1 -1
- package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +2 -2
- package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +2 -2
- package/lib/mol-model-props/computed/representations/interactions.d.ts +6 -6
- package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +8 -8
- package/lib/mol-plugin/behavior/behavior.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/representation.d.ts +2 -2
- package/lib/mol-plugin/behavior/dynamic/selection/structure-focus-representation.d.ts +1 -1
- package/lib/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +4 -4
- package/lib/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +2 -2
- package/lib/mol-plugin/commands.d.ts +2 -2
- package/lib/mol-plugin/layout.d.ts +4 -4
- package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -3
- package/lib/mol-plugin/version.js +2 -2
- package/lib/mol-plugin-state/actions/structure.d.ts +1 -1
- package/lib/mol-plugin-state/animation/built-in/model-index.d.ts +3 -3
- package/lib/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +5 -5
- package/lib/mol-plugin-state/builder/structure/hierarchy.d.ts +5 -5
- package/lib/mol-plugin-state/builder/structure/representation-preset.d.ts +15 -15
- package/lib/mol-plugin-state/builder/structure/representation.d.ts +1 -1
- package/lib/mol-plugin-state/formats/volume.d.ts +10 -10
- package/lib/mol-plugin-state/helpers/root-structure.d.ts +5 -5
- package/lib/mol-plugin-state/helpers/structure-component.d.ts +1 -1
- package/lib/mol-plugin-state/manager/interactivity.d.ts +1 -1
- package/lib/mol-plugin-state/manager/structure/component.d.ts +3 -3
- package/lib/mol-plugin-state/transforms/data.d.ts +1 -1
- package/lib/mol-plugin-state/transforms/model.d.ts +7 -7
- package/lib/mol-plugin-state/transforms/representation.d.ts +10 -10
- package/lib/mol-plugin-ui/structure/measurements.d.ts +1 -1
- package/lib/mol-plugin-ui/structure/selection.d.ts +1 -1
- package/lib/mol-repr/shape/loci/angle.d.ts +1 -1
- package/lib/mol-repr/shape/loci/common.d.ts +1 -1
- package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -1
- package/lib/mol-repr/shape/loci/distance.d.ts +1 -1
- package/lib/mol-repr/shape/loci/label.d.ts +1 -1
- package/lib/mol-repr/shape/loci/orientation.d.ts +2 -2
- package/lib/mol-repr/shape/loci/plane.d.ts +1 -1
- package/lib/mol-repr/shape/model/unitcell.d.ts +2 -2
- package/lib/mol-repr/structure/complex-visual.d.ts +12 -12
- package/lib/mol-repr/structure/params.d.ts +11 -11
- package/lib/mol-repr/structure/registry.d.ts +41 -41
- package/lib/mol-repr/structure/representation/backbone.d.ts +6 -6
- package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +15 -15
- package/lib/mol-repr/structure/representation/carbohydrate.d.ts +6 -6
- package/lib/mol-repr/structure/representation/cartoon.d.ts +9 -9
- package/lib/mol-repr/structure/representation/ellipsoid.d.ts +15 -15
- package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +6 -6
- package/lib/mol-repr/structure/representation/gaussian-volume.d.ts +6 -6
- package/lib/mol-repr/structure/representation/label.d.ts +9 -9
- package/lib/mol-repr/structure/representation/line.d.ts +18 -18
- package/lib/mol-repr/structure/representation/molecular-surface.d.ts +6 -6
- package/lib/mol-repr/structure/representation/orientation.d.ts +6 -6
- package/lib/mol-repr/structure/representation/point.d.ts +9 -9
- package/lib/mol-repr/structure/representation/putty.d.ts +6 -6
- package/lib/mol-repr/structure/representation/spacefill.d.ts +6 -6
- package/lib/mol-repr/structure/units-visual.d.ts +17 -17
- package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +10 -10
- package/lib/mol-repr/structure/visual/bond-inter-unit-line.d.ts +5 -5
- package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +10 -10
- package/lib/mol-repr/structure/visual/bond-intra-unit-line.d.ts +5 -5
- package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +2 -2
- package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +2 -2
- package/lib/mol-repr/structure/visual/element-cross.d.ts +2 -2
- package/lib/mol-repr/structure/visual/element-point.d.ts +3 -3
- package/lib/mol-repr/structure/visual/element-sphere.d.ts +4 -4
- package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/gaussian-density-volume.d.ts +4 -4
- package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +8 -8
- package/lib/mol-repr/structure/visual/gaussian-surface-wireframe.d.ts +2 -2
- package/lib/mol-repr/structure/visual/label-text.d.ts +3 -3
- package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/molecular-surface-wireframe.d.ts +2 -2
- package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +4 -4
- package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +4 -4
- package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +2 -2
- package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +2 -2
- package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +5 -5
- package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +2 -2
- package/lib/mol-repr/structure/visual/util/bond.d.ts +18 -18
- package/lib/mol-repr/structure/visual/util/common.d.ts +2 -2
- package/lib/mol-repr/volume/direct-volume.d.ts +8 -8
- package/lib/mol-repr/volume/isosurface.d.ts +12 -12
- package/lib/mol-repr/volume/registry.d.ts +8 -8
- package/lib/mol-repr/volume/representation.d.ts +1 -1
- package/lib/mol-repr/volume/slice.d.ts +12 -12
- package/lib/mol-theme/color/element-symbol.d.ts +4 -4
- package/lib/mol-theme/color.d.ts +2 -2
- package/lib/mol-util/color/names.d.ts +1 -1
- package/lib/mol-util/color/palette.d.ts +1 -1
- package/lib/mol-util/color/scale.d.ts +1 -1
- package/lib/servers/model/config.d.ts +2 -2
- package/lib/tsconfig.commonjs.tsbuildinfo +1 -1
- package/package.json +1 -1
- package/lib/commonjs/mol-repr/structure/visual/util/color.d.ts +0 -24
- package/lib/commonjs/mol-repr/structure/visual/util/color.js +0 -100
- package/lib/commonjs/mol-repr/structure/visual/util/color.js.map +0 -1
- package/lib/mol-gl/_spec/shader.spec.d.ts +0 -0
- package/lib/mol-gl/_spec/shader.spec.js +0 -2
- package/lib/mol-gl/_spec/shader.spec.js.map +0 -1
- package/lib/mol-gl/compute/copy.d.ts +0 -20
- package/lib/mol-gl/compute/copy.js +0 -24
- package/lib/mol-gl/compute/copy.js.map +0 -1
- package/lib/mol-repr/structure/visual/orientation-axes-mesh.d.ts +0 -35
- package/lib/mol-repr/structure/visual/orientation-axes-mesh.js +0 -43
- package/lib/mol-repr/structure/visual/orientation-axes-mesh.js.map +0 -1
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.d.ts +0 -31
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.js +0 -48
- package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh copy.js.map +0 -1
- package/lib/mol-repr/structure/visual/util/color.d.ts +0 -24
- package/lib/mol-repr/structure/visual/util/color.js +0 -94
- package/lib/mol-repr/structure/visual/util/color.js.map +0 -1
- package/lib/mol-repr/structure/visual/util/orientation.d.ts +0 -17
- package/lib/mol-repr/structure/visual/util/orientation.js +0 -71
- package/lib/mol-repr/structure/visual/util/orientation.js.map +0 -1
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@@ -10,17 +10,17 @@ import { ThemeRegistryContext } from '../../../mol-theme/theme';
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import { Structure } from '../../../mol-model/structure';
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export declare const BallAndStickParams: {
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includeParent: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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tryUseImpostor: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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includeTypes: PD.MultiSelect<"covalent" | "
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excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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linkCap: PD.BooleanParam;
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@@ -36,7 +36,7 @@ export declare const BallAndStickParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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traceOnly: PD.BooleanParam;
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@@ -45,17 +45,17 @@ export declare const BallAndStickParams: {
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export declare type BallAndStickParams = typeof BallAndStickParams;
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export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structure: Structure): {
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includeParent: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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tryUseImpostor: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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includeTypes: PD.MultiSelect<"covalent" | "
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excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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linkCap: PD.BooleanParam;
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@@ -71,7 +71,7 @@ export declare function getBallAndStickParams(ctx: ThemeRegistryContext, structu
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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traceOnly: PD.BooleanParam;
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@@ -81,17 +81,17 @@ export declare type BallAndStickRepresentation = StructureRepresentation<BallAnd
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export declare function BallAndStickRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, BallAndStickParams>): BallAndStickRepresentation;
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export declare const BallAndStickRepresentationProvider: StructureRepresentationProvider<{
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includeParent: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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visuals: PD.MultiSelect<"element-sphere" | "intra-bond" | "inter-bond">;
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tryUseImpostor: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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-
includeTypes: PD.MultiSelect<"covalent" | "
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excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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linkCap: PD.BooleanParam;
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@@ -107,7 +107,7 @@ export declare const BallAndStickRepresentationProvider: StructureRepresentation
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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traceOnly: PD.BooleanParam;
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@@ -22,7 +22,7 @@ export declare const CarbohydrateParams: {
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dashCap: PD.BooleanParam;
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stubCap: PD.BooleanParam;
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radialSegments: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -30,7 +30,7 @@ export declare const CarbohydrateParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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linkSizeFactor: PD.Numeric;
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detail: PD.Numeric;
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sizeFactor: PD.Numeric;
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@@ -50,7 +50,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
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dashCap: PD.BooleanParam;
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stubCap: PD.BooleanParam;
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radialSegments: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -58,7 +58,7 @@ export declare function getCarbohydrateParams(ctx: ThemeRegistryContext, structu
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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linkSizeFactor: PD.Numeric;
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detail: PD.Numeric;
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sizeFactor: PD.Numeric;
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@@ -79,7 +79,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
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dashCap: PD.BooleanParam;
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stubCap: PD.BooleanParam;
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radialSegments: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -87,7 +87,7 @@ export declare const CarbohydrateRepresentationProvider: StructureRepresentation
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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linkSizeFactor: PD.Numeric;
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detail: PD.Numeric;
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sizeFactor: PD.Numeric;
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@@ -11,7 +11,7 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../rep
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export declare const CartoonParams: {
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sizeFactor: PD.Numeric;
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visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -19,20 +19,20 @@ export declare const CartoonParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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radialSegments: PD.Numeric;
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detail: PD.Numeric;
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aspectRatio: PD.Numeric;
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arrowFactor: PD.Numeric;
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tubularHelices: PD.BooleanParam;
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helixProfile: PD.Select<"
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helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
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linearSegments: PD.Numeric;
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};
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export declare type CartoonParams = typeof CartoonParams;
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export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: Structure): {
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sizeFactor: PD.Numeric;
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visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -40,13 +40,13 @@ export declare function getCartoonParams(ctx: ThemeRegistryContext, structure: S
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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radialSegments: PD.Numeric;
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detail: PD.Numeric;
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aspectRatio: PD.Numeric;
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arrowFactor: PD.Numeric;
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tubularHelices: PD.BooleanParam;
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helixProfile: PD.Select<"
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helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
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linearSegments: PD.Numeric;
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};
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export declare type CartoonRepresentation = StructureRepresentation<CartoonParams>;
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@@ -54,7 +54,7 @@ export declare function CartoonRepresentation(ctx: RepresentationContext, getPar
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export declare const CartoonRepresentationProvider: StructureRepresentationProvider<{
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sizeFactor: PD.Numeric;
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visuals: PD.MultiSelect<"polymer-trace" | "polymer-gap" | "nucleotide-block" | "nucleotide-ring" | "direction-wedge">;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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@@ -62,12 +62,12 @@ export declare const CartoonRepresentationProvider: StructureRepresentationProvi
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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radialSegments: PD.Numeric;
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detail: PD.Numeric;
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aspectRatio: PD.Numeric;
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arrowFactor: PD.Numeric;
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tubularHelices: PD.BooleanParam;
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helixProfile: PD.Select<"
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helixProfile: PD.Select<"square" | "elliptical" | "rounded">;
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linearSegments: PD.Numeric;
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}, "cartoon">;
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@@ -11,17 +11,17 @@ import { StructureRepresentation, StructureRepresentationProvider } from '../../
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export declare const EllipsoidParams: {
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
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tryUseImpostor: PD.BooleanParam;
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-
includeTypes: PD.MultiSelect<"covalent" | "
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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aromaticScale: PD.Numeric;
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@@ -36,7 +36,7 @@ export declare const EllipsoidParams: {
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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detail: PD.Numeric;
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@@ -45,17 +45,17 @@ export declare type EllipsoidParams = typeof EllipsoidParams;
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export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure: Structure): {
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
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tryUseImpostor: PD.BooleanParam;
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includeTypes: PD.MultiSelect<"covalent" | "
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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aromaticScale: PD.Numeric;
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@@ -70,7 +70,7 @@ export declare function getEllipsoidParams(ctx: ThemeRegistryContext, structure:
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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detail: PD.Numeric;
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@@ -80,17 +80,17 @@ export declare function EllipsoidRepresentation(ctx: RepresentationContext, getP
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export declare const EllipsoidRepresentationProvider: StructureRepresentationProvider<{
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includeParent: PD.BooleanParam;
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adjustCylinderLength: PD.BooleanParam;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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sizeFactor: PD.Numeric;
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sizeAspectRatio: PD.Numeric;
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linkCap: PD.BooleanParam;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "ellipsoid-mesh">;
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tryUseImpostor: PD.BooleanParam;
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includeTypes: PD.MultiSelect<"covalent" | "
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-
excludeTypes: PD.MultiSelect<"covalent" | "
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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ignoreHydrogens: PD.BooleanParam;
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aromaticBonds: PD.BooleanParam;
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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aromaticScale: PD.Numeric;
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@@ -105,7 +105,7 @@ export declare const EllipsoidRepresentationProvider: StructureRepresentationPro
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ignoreLight: PD.BooleanParam;
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xrayShaded: PD.BooleanParam;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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detail: PD.Numeric;
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@@ -18,9 +18,9 @@ export declare const GaussianSurfaceParams: {
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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tryUseGpu: PD.BooleanParam;
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smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
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resolutionFactor: number;
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@@ -43,9 +43,9 @@ export declare function getGaussianSurfaceParams(ctx: ThemeRegistryContext, stru
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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tryUseGpu: PD.BooleanParam;
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smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
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resolutionFactor: number;
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@@ -69,9 +69,9 @@ export declare const GaussianSurfaceRepresentationProvider: StructureRepresentat
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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tryUseGpu: PD.BooleanParam;
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smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
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resolutionFactor: number;
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@@ -16,7 +16,7 @@ export declare const GaussianVolumeParams: {
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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@@ -41,7 +41,7 @@ export declare const GaussianVolumeParams: {
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stepsPerCell: PD.Numeric;
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jumpLength: PD.Numeric;
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alpha: PD.Numeric;
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-
quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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};
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export declare type GaussianVolumeParams = typeof GaussianVolumeParams;
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export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, structure: Structure): {
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@@ -52,7 +52,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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@@ -77,7 +77,7 @@ export declare function getGaussianVolumeParams(ctx: ThemeRegistryContext, struc
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stepsPerCell: PD.Numeric;
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jumpLength: PD.Numeric;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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};
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export declare type GaussianVolumeRepresentation = StructureRepresentation<GaussianVolumeParams>;
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export declare function GaussianVolumeRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, GaussianVolumeParams>): GaussianVolumeRepresentation;
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@@ -89,7 +89,7 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
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resolution: PD.Numeric;
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radiusOffset: PD.Numeric;
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smoothness: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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doubleSided: PD.BooleanParam;
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flipSided: PD.BooleanParam;
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flatShaded: PD.BooleanParam;
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@@ -114,5 +114,5 @@ export declare const GaussianVolumeRepresentationProvider: StructureRepresentati
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stepsPerCell: PD.Numeric;
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jumpLength: PD.Numeric;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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}, "gaussian-volume">;
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@@ -14,11 +14,11 @@ export declare const LabelParams: {
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backgroundMargin: PD.Numeric;
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backgroundColor: PD.Color;
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backgroundOpacity: PD.Numeric;
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level: PD.Select<"
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level: PD.Select<"element" | "residue" | "chain">;
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chainScale: PD.Numeric;
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residueScale: PD.Numeric;
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elementScale: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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borderWidth: PD.Numeric;
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@@ -36,7 +36,7 @@ export declare const LabelParams: {
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fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
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fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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};
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export declare type LabelParams = typeof LabelParams;
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export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Structure): {
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@@ -45,11 +45,11 @@ export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Str
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backgroundMargin: PD.Numeric;
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backgroundColor: PD.Color;
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backgroundOpacity: PD.Numeric;
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level: PD.Select<"
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level: PD.Select<"element" | "residue" | "chain">;
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chainScale: PD.Numeric;
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residueScale: PD.Numeric;
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elementScale: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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borderWidth: PD.Numeric;
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@@ -67,7 +67,7 @@ export declare function getLabelParams(ctx: ThemeRegistryContext, structure: Str
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fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
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fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
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alpha: PD.Numeric;
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quality: PD.Select<"
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+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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};
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export declare type LabelRepresentation = StructureRepresentation<LabelParams>;
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export declare function LabelRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, LabelParams>): LabelRepresentation;
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@@ -77,11 +77,11 @@ export declare const LabelRepresentationProvider: StructureRepresentationProvide
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backgroundMargin: PD.Numeric;
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backgroundColor: PD.Color;
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backgroundOpacity: PD.Numeric;
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level: PD.Select<"
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level: PD.Select<"element" | "residue" | "chain">;
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chainScale: PD.Numeric;
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residueScale: PD.Numeric;
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elementScale: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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borderWidth: PD.Numeric;
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@@ -99,5 +99,5 @@ export declare const LabelRepresentationProvider: StructureRepresentationProvide
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fontVariant: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontVariant>;
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fontWeight: PD.Select<import("../../../mol-geo/geometry/text/font-atlas").FontWeight>;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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}, "label">;
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@@ -9,10 +9,10 @@ import { RepresentationParamsGetter, RepresentationContext } from '../../../mol-
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import { ThemeRegistryContext } from '../../../mol-theme/theme';
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import { Structure } from '../../../mol-model/structure';
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export declare const LineParams: {
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
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lineSizeAttenuation: PD.BooleanParam;
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ignoreHydrogens: PD.BooleanParam;
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@@ -20,11 +20,11 @@ export declare const LineParams: {
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crosses: PD.Select<"all" | "lone">;
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crossSize: PD.Numeric;
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alpha: PD.Numeric;
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quality: PD.Select<"
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quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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pointSizeAttenuation: PD.BooleanParam;
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pointStyle: PD.Select<"
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includeTypes: PD.MultiSelect<"covalent" | "
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excludeTypes: PD.MultiSelect<"covalent" | "
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pointStyle: PD.Select<"circle" | "square" | "fuzzy">;
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includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
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aromaticBonds: PD.BooleanParam;
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linkScale: PD.Numeric;
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linkSpacing: PD.Numeric;
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@@ -33,10 +33,10 @@ export declare const LineParams: {
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};
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export declare type LineParams = typeof LineParams;
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export declare function getLineParams(ctx: ThemeRegistryContext, structure: Structure): {
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multipleBonds: PD.Select<"
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multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
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includeParent: PD.BooleanParam;
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sizeFactor: PD.Numeric;
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-
unitKinds: PD.MultiSelect<"
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unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
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visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
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lineSizeAttenuation: PD.BooleanParam;
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ignoreHydrogens: PD.BooleanParam;
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@@ -44,11 +44,11 @@ export declare function getLineParams(ctx: ThemeRegistryContext, structure: Stru
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crosses: PD.Select<"all" | "lone">;
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crossSize: PD.Numeric;
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46
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alpha: PD.Numeric;
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47
|
-
quality: PD.Select<"
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47
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
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48
48
|
pointSizeAttenuation: PD.BooleanParam;
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|
49
|
-
pointStyle: PD.Select<"
|
|
50
|
-
includeTypes: PD.MultiSelect<"covalent" | "
|
|
51
|
-
excludeTypes: PD.MultiSelect<"covalent" | "
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|
49
|
+
pointStyle: PD.Select<"circle" | "square" | "fuzzy">;
|
|
50
|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
51
|
+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
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52
52
|
aromaticBonds: PD.BooleanParam;
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53
53
|
linkScale: PD.Numeric;
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54
54
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linkSpacing: PD.Numeric;
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|
@@ -58,10 +58,10 @@ export declare function getLineParams(ctx: ThemeRegistryContext, structure: Stru
|
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58
58
|
export declare type LineRepresentation = StructureRepresentation<LineParams>;
|
|
59
59
|
export declare function LineRepresentation(ctx: RepresentationContext, getParams: RepresentationParamsGetter<Structure, LineParams>): LineRepresentation;
|
|
60
60
|
export declare const LineRepresentationProvider: StructureRepresentationProvider<{
|
|
61
|
-
multipleBonds: PD.Select<"
|
|
61
|
+
multipleBonds: PD.Select<"offset" | "off" | "symmetric">;
|
|
62
62
|
includeParent: PD.BooleanParam;
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|
63
63
|
sizeFactor: PD.Numeric;
|
|
64
|
-
unitKinds: PD.MultiSelect<"
|
|
64
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
65
65
|
visuals: PD.MultiSelect<"intra-bond" | "inter-bond" | "element-point" | "element-cross">;
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|
66
66
|
lineSizeAttenuation: PD.BooleanParam;
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|
67
67
|
ignoreHydrogens: PD.BooleanParam;
|
|
@@ -69,11 +69,11 @@ export declare const LineRepresentationProvider: StructureRepresentationProvider
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|
|
69
69
|
crosses: PD.Select<"all" | "lone">;
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|
70
70
|
crossSize: PD.Numeric;
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|
71
71
|
alpha: PD.Numeric;
|
|
72
|
-
quality: PD.Select<"
|
|
72
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
73
73
|
pointSizeAttenuation: PD.BooleanParam;
|
|
74
|
-
pointStyle: PD.Select<"
|
|
75
|
-
includeTypes: PD.MultiSelect<"covalent" | "
|
|
76
|
-
excludeTypes: PD.MultiSelect<"covalent" | "
|
|
74
|
+
pointStyle: PD.Select<"circle" | "square" | "fuzzy">;
|
|
75
|
+
includeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
76
|
+
excludeTypes: PD.MultiSelect<"covalent" | "metal-coordination" | "hydrogen-bond" | "disulfide" | "aromatic" | "computed">;
|
|
77
77
|
aromaticBonds: PD.BooleanParam;
|
|
78
78
|
linkScale: PD.Numeric;
|
|
79
79
|
linkSpacing: PD.Numeric;
|
|
@@ -17,10 +17,10 @@ export declare const MolecularSurfaceParams: {
|
|
|
17
17
|
probeRadius: PD.Numeric;
|
|
18
18
|
resolution: PD.Numeric;
|
|
19
19
|
probePositions: PD.Numeric;
|
|
20
|
-
unitKinds: PD.MultiSelect<"
|
|
20
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
21
21
|
lineSizeAttenuation: PD.BooleanParam;
|
|
22
22
|
alpha: PD.Numeric;
|
|
23
|
-
quality: PD.Select<"
|
|
23
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
24
24
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
25
25
|
resolutionFactor: number;
|
|
26
26
|
sampleStride: number;
|
|
@@ -41,10 +41,10 @@ export declare function getMolecularSurfaceParams(ctx: ThemeRegistryContext, str
|
|
|
41
41
|
probeRadius: PD.Numeric;
|
|
42
42
|
resolution: PD.Numeric;
|
|
43
43
|
probePositions: PD.Numeric;
|
|
44
|
-
unitKinds: PD.MultiSelect<"
|
|
44
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
45
45
|
lineSizeAttenuation: PD.BooleanParam;
|
|
46
46
|
alpha: PD.Numeric;
|
|
47
|
-
quality: PD.Select<"
|
|
47
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
48
48
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
49
49
|
resolutionFactor: number;
|
|
50
50
|
sampleStride: number;
|
|
@@ -66,10 +66,10 @@ export declare const MolecularSurfaceRepresentationProvider: StructureRepresenta
|
|
|
66
66
|
probeRadius: PD.Numeric;
|
|
67
67
|
resolution: PD.Numeric;
|
|
68
68
|
probePositions: PD.Numeric;
|
|
69
|
-
unitKinds: PD.MultiSelect<"
|
|
69
|
+
unitKinds: PD.MultiSelect<"spheres" | "gaussians" | "atomic">;
|
|
70
70
|
lineSizeAttenuation: PD.BooleanParam;
|
|
71
71
|
alpha: PD.Numeric;
|
|
72
|
-
quality: PD.Select<"
|
|
72
|
+
quality: PD.Select<"auto" | "medium" | "high" | "low" | "custom" | "highest" | "higher" | "lower" | "lowest">;
|
|
73
73
|
smoothColors: PD.Mapped<PD.NamedParams<PD.Normalize<unknown>, "auto"> | PD.NamedParams<PD.Normalize<{
|
|
74
74
|
resolutionFactor: number;
|
|
75
75
|
sampleStride: number;
|