molstar 2.3.2 → 2.3.7

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (710) hide show
  1. package/CHANGELOG.md +191 -160
  2. package/LICENSE +20 -20
  3. package/README.md +176 -176
  4. package/build/viewer/embedded.html +43 -43
  5. package/build/viewer/index.html +94 -88
  6. package/build/viewer/molstar.js +1 -1
  7. package/lib/apps/docking-viewer/index.html +36 -36
  8. package/lib/apps/viewer/embedded.html +43 -43
  9. package/lib/apps/viewer/index.d.ts +296 -5
  10. package/lib/apps/viewer/index.html +94 -88
  11. package/lib/apps/viewer/index.js +96 -6
  12. package/lib/apps/viewer/index.js.map +1 -1
  13. package/lib/cli/chem-comp-dict/util.d.ts +4 -4
  14. package/lib/commonjs/apps/viewer/index.d.ts +295 -4
  15. package/lib/commonjs/apps/viewer/index.js +96 -6
  16. package/lib/commonjs/apps/viewer/index.js.map +1 -1
  17. package/lib/commonjs/cli/chem-comp-dict/util.d.ts +4 -4
  18. package/lib/commonjs/cli/cif2bcif/index.js +0 -0
  19. package/lib/commonjs/cli/cifschema/index.js +0 -0
  20. package/lib/commonjs/extensions/cellpack/color/generate.d.ts +1 -1
  21. package/lib/commonjs/extensions/cellpack/color/generate.js +1 -1
  22. package/lib/commonjs/extensions/cellpack/color/provided.d.ts +1 -1
  23. package/lib/commonjs/extensions/cellpack/color/provided.js +1 -1
  24. package/lib/commonjs/extensions/cellpack/curve.d.ts +2 -2
  25. package/lib/commonjs/extensions/cellpack/curve.js +2 -2
  26. package/lib/commonjs/extensions/cellpack/data.d.ts +32 -0
  27. package/lib/commonjs/extensions/cellpack/index.d.ts +1 -1
  28. package/lib/commonjs/extensions/cellpack/index.js +1 -1
  29. package/lib/commonjs/extensions/cellpack/model.d.ts +5 -3
  30. package/lib/commonjs/extensions/cellpack/model.js +193 -55
  31. package/lib/commonjs/extensions/cellpack/model.js.map +1 -1
  32. package/lib/commonjs/extensions/cellpack/preset.d.ts +2 -1
  33. package/lib/commonjs/extensions/cellpack/preset.js +12 -15
  34. package/lib/commonjs/extensions/cellpack/preset.js.map +1 -1
  35. package/lib/commonjs/extensions/cellpack/property.d.ts +1 -1
  36. package/lib/commonjs/extensions/cellpack/property.js +1 -1
  37. package/lib/commonjs/extensions/cellpack/representation.d.ts +53 -0
  38. package/lib/commonjs/extensions/cellpack/representation.js +47 -0
  39. package/lib/commonjs/extensions/cellpack/representation.js.map +1 -0
  40. package/lib/commonjs/extensions/cellpack/state.d.ts +16 -5
  41. package/lib/commonjs/extensions/cellpack/state.js +233 -26
  42. package/lib/commonjs/extensions/cellpack/state.js.map +1 -1
  43. package/lib/commonjs/extensions/cellpack/util.d.ts +3 -1
  44. package/lib/commonjs/extensions/cellpack/util.js +31 -3
  45. package/lib/commonjs/extensions/cellpack/util.js.map +1 -1
  46. package/lib/commonjs/extensions/geo-export/mesh-exporter.d.ts +1 -1
  47. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +2 -2
  48. package/lib/commonjs/extensions/rcsb/assembly-symmetry/color.d.ts +12 -12
  49. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +15 -0
  50. package/lib/commonjs/extensions/rcsb/validation-report/representation.js +2 -2
  51. package/lib/commonjs/mol-canvas3d/camera/util.d.ts +4 -3
  52. package/lib/commonjs/mol-canvas3d/camera/util.js +15 -16
  53. package/lib/commonjs/mol-canvas3d/camera/util.js.map +1 -1
  54. package/lib/commonjs/mol-canvas3d/camera.d.ts +11 -3
  55. package/lib/commonjs/mol-canvas3d/camera.js +21 -1
  56. package/lib/commonjs/mol-canvas3d/camera.js.map +1 -1
  57. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +14 -4
  58. package/lib/commonjs/mol-canvas3d/canvas3d.js +8 -2
  59. package/lib/commonjs/mol-canvas3d/canvas3d.js.map +1 -1
  60. package/lib/commonjs/mol-canvas3d/helper/interaction-events.d.ts +13 -4
  61. package/lib/commonjs/mol-canvas3d/helper/interaction-events.js +43 -9
  62. package/lib/commonjs/mol-canvas3d/helper/interaction-events.js.map +1 -1
  63. package/lib/commonjs/mol-canvas3d/passes/draw.js +1 -0
  64. package/lib/commonjs/mol-canvas3d/passes/draw.js.map +1 -1
  65. package/lib/commonjs/mol-canvas3d/passes/pick.d.ts +5 -2
  66. package/lib/commonjs/mol-canvas3d/passes/pick.js +17 -3
  67. package/lib/commonjs/mol-canvas3d/passes/pick.js.map +1 -1
  68. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.d.ts +2 -2
  69. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js +10 -1
  70. package/lib/commonjs/mol-geo/geometry/direct-volume/direct-volume.js.map +1 -1
  71. package/lib/commonjs/mol-geo/geometry/image/image.js +4 -1
  72. package/lib/commonjs/mol-geo/geometry/image/image.js.map +1 -1
  73. package/lib/commonjs/mol-geo/geometry/lines/lines.js +1 -1
  74. package/lib/commonjs/mol-geo/geometry/lines/lines.js.map +1 -1
  75. package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.d.ts +1 -1
  76. package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js +19 -11
  77. package/lib/commonjs/mol-geo/geometry/mesh/builder/sheet.js.map +1 -1
  78. package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.d.ts +2 -2
  79. package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js +57 -15
  80. package/lib/commonjs/mol-geo/geometry/mesh/builder/tube.js.map +1 -1
  81. package/lib/commonjs/mol-geo/geometry/points/points.js +1 -1
  82. package/lib/commonjs/mol-geo/geometry/points/points.js.map +1 -1
  83. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -0
  84. package/lib/commonjs/mol-geo/geometry/text/text.js +1 -1
  85. package/lib/commonjs/mol-geo/geometry/text/text.js.map +1 -1
  86. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +6 -1
  87. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js.map +1 -1
  88. package/lib/commonjs/mol-gl/_spec/cylinders.spec.d.ts +6 -0
  89. package/lib/commonjs/mol-gl/_spec/cylinders.spec.js +42 -0
  90. package/lib/commonjs/mol-gl/_spec/cylinders.spec.js.map +1 -0
  91. package/lib/commonjs/mol-gl/_spec/direct-volume.spec.d.ts +6 -0
  92. package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js +42 -0
  93. package/lib/commonjs/mol-gl/_spec/direct-volume.spec.js.map +1 -0
  94. package/lib/commonjs/mol-gl/_spec/gl.d.ts +9 -0
  95. package/lib/commonjs/mol-gl/_spec/gl.js +33 -0
  96. package/lib/commonjs/mol-gl/_spec/gl.js.map +1 -0
  97. package/lib/commonjs/mol-gl/_spec/gl.shim.js +1 -1
  98. package/lib/commonjs/mol-gl/_spec/gl.shim.js.map +1 -1
  99. package/lib/commonjs/mol-gl/_spec/image.spec.d.ts +6 -0
  100. package/lib/commonjs/mol-gl/_spec/image.spec.js +42 -0
  101. package/lib/commonjs/mol-gl/_spec/image.spec.js.map +1 -0
  102. package/lib/commonjs/mol-gl/_spec/lines.spec.d.ts +6 -0
  103. package/lib/commonjs/mol-gl/_spec/lines.spec.js +42 -0
  104. package/lib/commonjs/mol-gl/_spec/lines.spec.js.map +1 -0
  105. package/lib/commonjs/mol-gl/_spec/mesh.spec.d.ts +6 -0
  106. package/lib/commonjs/mol-gl/_spec/mesh.spec.js +42 -0
  107. package/lib/commonjs/mol-gl/_spec/mesh.spec.js.map +1 -0
  108. package/lib/commonjs/mol-gl/_spec/points.spec.d.ts +6 -0
  109. package/lib/commonjs/mol-gl/_spec/points.spec.js +42 -0
  110. package/lib/commonjs/mol-gl/_spec/points.spec.js.map +1 -0
  111. package/lib/commonjs/mol-gl/_spec/renderer.spec.d.ts +7 -1
  112. package/lib/commonjs/mol-gl/_spec/renderer.spec.js +6 -44
  113. package/lib/commonjs/mol-gl/_spec/renderer.spec.js.map +1 -1
  114. package/lib/commonjs/mol-gl/_spec/spheres.spec.d.ts +6 -0
  115. package/lib/commonjs/mol-gl/_spec/spheres.spec.js +42 -0
  116. package/lib/commonjs/mol-gl/_spec/spheres.spec.js.map +1 -0
  117. package/lib/commonjs/mol-gl/_spec/text.spec.d.ts +6 -0
  118. package/lib/commonjs/mol-gl/_spec/text.spec.js +42 -0
  119. package/lib/commonjs/mol-gl/_spec/text.spec.js.map +1 -0
  120. package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.d.ts +6 -0
  121. package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js +42 -0
  122. package/lib/commonjs/mol-gl/_spec/texture-mesh.spec.js.map +1 -0
  123. package/lib/commonjs/mol-gl/renderer.d.ts +3 -2
  124. package/lib/commonjs/mol-gl/renderer.js +3 -0
  125. package/lib/commonjs/mol-gl/renderer.js.map +1 -1
  126. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  127. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  128. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js.map +1 -1
  129. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  130. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  131. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js.map +1 -1
  132. package/lib/commonjs/mol-gl/shader/lines.vert.d.ts +1 -1
  133. package/lib/commonjs/mol-gl/shader/lines.vert.js +1 -1
  134. package/lib/commonjs/mol-gl/shader/lines.vert.js.map +1 -1
  135. package/lib/commonjs/mol-gl/shader/points.vert.d.ts +1 -1
  136. package/lib/commonjs/mol-gl/shader/points.vert.js +1 -1
  137. package/lib/commonjs/mol-gl/shader/points.vert.js.map +1 -1
  138. package/lib/commonjs/mol-gl/webgl/context.d.ts +1 -1
  139. package/lib/commonjs/mol-gl/webgl/context.js +4 -2
  140. package/lib/commonjs/mol-gl/webgl/context.js.map +1 -1
  141. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +5 -5
  142. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +2 -2
  143. package/lib/commonjs/mol-io/reader/cif/schema/density-server.d.ts +3 -3
  144. package/lib/commonjs/mol-io/reader/cif/schema/mmcif-extras.d.ts +3 -3
  145. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +22 -22
  146. package/lib/commonjs/mol-io/reader/ply/schema.d.ts +1 -1
  147. package/lib/commonjs/mol-math/geometry/primitives/axes3d.d.ts +2 -1
  148. package/lib/commonjs/mol-math/geometry/primitives/axes3d.js +9 -2
  149. package/lib/commonjs/mol-math/geometry/primitives/axes3d.js.map +1 -1
  150. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.d.ts +3 -1
  151. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js +11 -3
  152. package/lib/commonjs/mol-math/linear-algebra/3d/vec3.js.map +1 -1
  153. package/lib/commonjs/mol-math/misc.d.ts +3 -1
  154. package/lib/commonjs/mol-math/misc.js +24 -2
  155. package/lib/commonjs/mol-math/misc.js.map +1 -1
  156. package/lib/commonjs/mol-model/loci.d.ts +32 -32
  157. package/lib/commonjs/mol-model/loci.js +4 -3
  158. package/lib/commonjs/mol-model/loci.js.map +1 -1
  159. package/lib/commonjs/mol-model/shape/shape.d.ts +1 -1
  160. package/lib/commonjs/mol-model/structure/structure/element/loci.d.ts +1 -0
  161. package/lib/commonjs/mol-model/structure/structure/element/loci.js +14 -0
  162. package/lib/commonjs/mol-model/structure/structure/element/loci.js.map +1 -1
  163. package/lib/commonjs/mol-model/structure/structure/properties.d.ts +3 -3
  164. package/lib/commonjs/mol-model/structure/structure/structure.js +2 -1
  165. package/lib/commonjs/mol-model/structure/structure/structure.js.map +1 -1
  166. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js +1 -1
  167. package/lib/commonjs/mol-model/structure/structure/unit/bonds/intra-compute.js.map +1 -1
  168. package/lib/commonjs/mol-model/structure/structure/unit/bonds.d.ts +2 -1
  169. package/lib/commonjs/mol-model/structure/structure/unit/bonds.js +6 -1
  170. package/lib/commonjs/mol-model/structure/structure/unit/bonds.js.map +1 -1
  171. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +8 -8
  172. package/lib/commonjs/mol-model-formats/structure/basic/schema.d.ts +6 -6
  173. package/lib/commonjs/mol-model-formats/structure/common/component.d.ts +8 -8
  174. package/lib/commonjs/mol-model-formats/structure/common/entity.d.ts +1 -1
  175. package/lib/commonjs/mol-model-formats/structure/pdb/entity.js +29 -3
  176. package/lib/commonjs/mol-model-formats/structure/pdb/entity.js.map +1 -1
  177. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +3 -0
  178. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +3 -0
  179. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +9 -0
  180. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +12 -0
  181. package/lib/commonjs/mol-model-props/sequence/themes/best-database-mapping.d.ts +12 -12
  182. package/lib/commonjs/mol-plugin/behavior/behavior.d.ts +1 -1
  183. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.d.ts +4 -2
  184. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.js +22 -8
  185. package/lib/commonjs/mol-plugin/behavior/dynamic/representation.js.map +1 -1
  186. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js +1 -1
  187. package/lib/commonjs/mol-plugin/behavior/dynamic/selection/structure-focus-representation.js.map +1 -1
  188. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/behavior.d.ts +10 -10
  189. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +3 -2
  190. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/transformers.d.ts +5 -5
  191. package/lib/commonjs/mol-plugin/commands.d.ts +6 -2
  192. package/lib/commonjs/mol-plugin/config.d.ts +1 -0
  193. package/lib/commonjs/mol-plugin/config.js +11 -3
  194. package/lib/commonjs/mol-plugin/config.js.map +1 -1
  195. package/lib/commonjs/mol-plugin/context.js +6 -4
  196. package/lib/commonjs/mol-plugin/context.js.map +1 -1
  197. package/lib/commonjs/mol-plugin-state/animation/built-in/model-index.d.ts +6 -6
  198. package/lib/commonjs/mol-plugin-state/builder/data.d.ts +3 -3
  199. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy-preset.d.ts +17 -17
  200. package/lib/commonjs/mol-plugin-state/builder/structure/hierarchy.d.ts +9 -9
  201. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.d.ts +10 -10
  202. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js +20 -16
  203. package/lib/commonjs/mol-plugin-state/builder/structure/representation-preset.js.map +1 -1
  204. package/lib/commonjs/mol-plugin-state/formats/shape.d.ts +2 -2
  205. package/lib/commonjs/mol-plugin-state/formats/structure.d.ts +6 -6
  206. package/lib/commonjs/mol-plugin-state/formats/volume.d.ts +26 -26
  207. package/lib/commonjs/mol-plugin-state/helpers/root-structure.d.ts +7 -7
  208. package/lib/commonjs/mol-plugin-state/helpers/structure-component.d.ts +1 -1
  209. package/lib/commonjs/mol-plugin-state/manager/interactivity.d.ts +2 -2
  210. package/lib/commonjs/mol-plugin-state/manager/interactivity.js +12 -11
  211. package/lib/commonjs/mol-plugin-state/manager/interactivity.js.map +1 -1
  212. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.d.ts +7 -2
  213. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js +111 -13
  214. package/lib/commonjs/mol-plugin-state/manager/structure/measurement.js.map +1 -1
  215. package/lib/commonjs/mol-plugin-state/manager/structure/selection.d.ts +3 -3
  216. package/lib/commonjs/mol-plugin-state/manager/structure/selection.js +4 -10
  217. package/lib/commonjs/mol-plugin-state/manager/structure/selection.js.map +1 -1
  218. package/lib/commonjs/mol-plugin-state/transforms/data.d.ts +6 -6
  219. package/lib/commonjs/mol-plugin-state/transforms/helpers.d.ts +3 -1
  220. package/lib/commonjs/mol-plugin-state/transforms/helpers.js +7 -4
  221. package/lib/commonjs/mol-plugin-state/transforms/helpers.js.map +1 -1
  222. package/lib/commonjs/mol-plugin-state/transforms/model.d.ts +9 -9
  223. package/lib/commonjs/mol-plugin-state/transforms/model.js.map +1 -1
  224. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +18 -3
  225. package/lib/commonjs/mol-plugin-state/transforms/representation.js +54 -2
  226. package/lib/commonjs/mol-plugin-state/transforms/representation.js.map +1 -1
  227. package/lib/commonjs/mol-plugin-ui/sequence.d.ts +1 -1
  228. package/lib/commonjs/mol-plugin-ui/sequence.js +16 -2
  229. package/lib/commonjs/mol-plugin-ui/sequence.js.map +1 -1
  230. package/lib/commonjs/mol-plugin-ui/structure/measurements.d.ts +11 -2
  231. package/lib/commonjs/mol-plugin-ui/structure/measurements.js +49 -6
  232. package/lib/commonjs/mol-plugin-ui/structure/measurements.js.map +1 -1
  233. package/lib/commonjs/mol-plugin-ui/structure/selection.d.ts +1 -1
  234. package/lib/commonjs/mol-repr/representation.d.ts +1 -0
  235. package/lib/commonjs/mol-repr/representation.js +10 -4
  236. package/lib/commonjs/mol-repr/representation.js.map +1 -1
  237. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +6 -5
  238. package/lib/commonjs/mol-repr/shape/loci/orientation.js +37 -51
  239. package/lib/commonjs/mol-repr/shape/loci/orientation.js.map +1 -1
  240. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +27 -0
  241. package/lib/commonjs/mol-repr/shape/loci/plane.js +61 -0
  242. package/lib/commonjs/mol-repr/shape/loci/plane.js.map +1 -0
  243. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +1 -1
  244. package/lib/commonjs/mol-repr/structure/params.d.ts +1 -1
  245. package/lib/commonjs/mol-repr/structure/registry.d.ts +34 -15
  246. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +18 -6
  247. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +9 -0
  248. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -0
  249. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +18 -6
  250. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +6 -6
  251. package/lib/commonjs/mol-repr/structure/representation/gaussian-volume.d.ts +3 -3
  252. package/lib/commonjs/mol-repr/structure/representation/line.d.ts +40 -19
  253. package/lib/commonjs/mol-repr/structure/representation/line.js +10 -4
  254. package/lib/commonjs/mol-repr/structure/representation/line.js.map +1 -1
  255. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +6 -6
  256. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +1 -1
  257. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +12 -4
  258. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.js +20 -9
  259. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.js.map +1 -1
  260. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.d.ts +4 -2
  261. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.js +13 -8
  262. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-line.js.map +1 -1
  263. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +12 -4
  264. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.js +21 -7
  265. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.js.map +1 -1
  266. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.d.ts +4 -2
  267. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.js +14 -6
  268. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-line.js.map +1 -1
  269. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +3 -0
  270. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +3 -0
  271. package/lib/commonjs/mol-repr/structure/visual/element-cross.d.ts +26 -0
  272. package/lib/commonjs/mol-repr/structure/visual/element-cross.js +77 -0
  273. package/lib/commonjs/mol-repr/structure/visual/element-cross.js.map +1 -0
  274. package/lib/commonjs/mol-repr/structure/visual/gaussian-density-volume.d.ts +2 -2
  275. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +8 -8
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- padding: $info-vertical-padding $control-spacing;
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- background: $default-background; //$highlight-info-background;
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-
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-
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- font-size: 85%;
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- display: inline-block;
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- color: $highlight-info-additional-font-color;
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- }
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+ .msp-viewport {
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+ position: absolute;
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+ left: 0;
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+ top: 0;
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+ right: 0;
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+ bottom: 0;
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+ background: black;
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+
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+ .msp-btn-link {
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+ background: rgba(0,0,0,0.2);
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+ }
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+
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+ }
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+
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+ .msp-viewport-expanded {
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+ position: fixed;
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+ z-index: 1000;
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+ }
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+
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+ .msp-viewport-host3d {
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+ position: absolute;
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+ left: 0;
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+ top: 0;
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+ right: 0;
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+ bottom: 0;
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+ -webkit-user-select: none;
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+ -webkit-tap-highlight-color: rgba(0,0,0,0);
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+ -webkit-touch-callout: none;
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+ touch-action: manipulation;
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+
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+ > canvas {
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+ background-color: $default-background;
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+ background-image: linear-gradient(45deg, lightgrey 25%, transparent 25%, transparent 75%, lightgrey 75%, lightgrey),
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+ linear-gradient(45deg, lightgrey 25%, transparent 25%, transparent 75%, lightgrey 75%, lightgrey);
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+ background-size: 60px 60px;
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+ background-position: 0 0, 30px 30px;
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+ }
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+ }
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+
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+ .msp-viewport-controls {
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+
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+ .msp-viewport-controls-buttons {
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+ text-align: right;
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+ position: relative;
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+ // opacity: 0.5;
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+ // &:hover { opacity: 1.0; }
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+
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+ position: relative;
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+ }
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+
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+ }
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+ }
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+
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+ position: absolute;
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+ width: 100%;
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+ height: 100%;
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+ }
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+
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+ .msp-viewport-controls-panel {
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+ width: 290px;
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+ top: 0;
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+ right: $row-height + 4px;
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+ position: absolute;
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+ background: $control-background;
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+
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+ .msp-control-group-wrapper:first-child {
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+ padding-top: 0;
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+ }
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+
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+ .msp-viewport-controls-panel-controls {
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+ overflow-y: auto;
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+ max-height: 400px;
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+ }
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+ }
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+
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+ /* highlight & toasts */
102
+
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+ .msp-highlight-toast-wrapper {
104
+ position: absolute;
105
+ right: $control-spacing;
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+ bottom: $control-spacing;
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+ max-width: 95%;
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+
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+ z-index: 10000;
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+ }
111
+
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+ .msp-highlight-info {
113
+ color: $highlight-info-font-color;
114
+ padding: $info-vertical-padding $control-spacing;
115
+ background: $default-background; //$highlight-info-background;
116
+
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+ // min-height: $row-height;
118
+ text-align: right;
119
+
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+ @include non-selectable;
121
+ }
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+
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+ .msp-highlight-info-additional {
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+ font-size: 85%;
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+ display: inline-block;
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+ color: $highlight-info-additional-font-color;
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+ }
@@ -1,72 +1,72 @@
1
-
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-
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- .msp-layout-expanded, .msp-layout-standard {
4
- left: 0;
5
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6
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- }
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-
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- .msp-layout-standard {
11
- border: 1px solid $border-color;
12
- }
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-
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- .msp-layout-region {
15
- overflow: hidden;
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- }
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-
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- .msp-layout-static, .msp-layout-scrollable {
19
- position: absolute;
20
- }
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-
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- .msp-scrollable {
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- overflow-y: auto;
24
- }
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-
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- .msp-scrollable-container {
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- position: absolute;
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- left: 0;
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- right: 0;
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- top: 0;
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- bottom: 0;
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- overflow-y: auto;
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- }
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-
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- .msp-layout-static {
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- overflow: hidden;
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- }
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-
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- .msp-layout-top, .msp-layout-main, .msp-layout-bottom {
40
- .msp-layout-static {
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- left: 0;
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- right: 0;
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- top: 0;
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- bottom: 0;
45
- }
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- }
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-
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- .msp-layout-right {
49
- .msp-layout-static {
50
- left: 0;
51
- right: 0;
52
- top: 0;
53
- bottom: 0; // height: $row-height + $control-spacing;
54
- }
55
-
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- .msp-layout-scrollable {
57
- left: 0;
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- right: 0;
59
- top: $row-height + $control-spacing + 1;
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- bottom: 0;
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- }
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-
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- }
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-
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- left: 0;
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- right: 0;
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- bottom: 0;
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- top: 0;
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- }
1
+
2
+
3
+ .msp-layout-expanded, .msp-layout-standard {
4
+ left: 0;
5
+ right: 0;
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+ top: 0;
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+ bottom: 0;
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+ }
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+
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+ .msp-layout-standard {
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+ border: 1px solid $border-color;
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+ }
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+
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+ .msp-layout-region {
15
+ overflow: hidden;
16
+ }
17
+
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+ .msp-layout-static, .msp-layout-scrollable {
19
+ position: absolute;
20
+ }
21
+
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+ .msp-scrollable {
23
+ overflow-y: auto;
24
+ }
25
+
26
+ .msp-scrollable-container {
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+ position: absolute;
28
+ left: 0;
29
+ right: 0;
30
+ top: 0;
31
+ bottom: 0;
32
+ overflow-y: auto;
33
+ }
34
+
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+ .msp-layout-static {
36
+ overflow: hidden;
37
+ }
38
+
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+ .msp-layout-top, .msp-layout-main, .msp-layout-bottom {
40
+ .msp-layout-static {
41
+ left: 0;
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+ right: 0;
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+ top: 0;
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+ bottom: 0;
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+ }
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+ }
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+
48
+ .msp-layout-right {
49
+ .msp-layout-static {
50
+ left: 0;
51
+ right: 0;
52
+ top: 0;
53
+ bottom: 0; // height: $row-height + $control-spacing;
54
+ }
55
+
56
+ .msp-layout-scrollable {
57
+ left: 0;
58
+ right: 0;
59
+ top: $row-height + $control-spacing + 1;
60
+ bottom: 0;
61
+ }
62
+
63
+ }
64
+
65
+ .msp-layout-left {
66
+ .msp-layout-static {
67
+ left: 0;
68
+ right: 0;
69
+ bottom: 0;
70
+ top: 0;
71
+ }
72
72
  }
@@ -1,90 +1,90 @@
1
- 
2
- .msp-layout-main {
3
- position: absolute;
4
- left: $expanded-left-width;
5
- right: $expanded-right-width;
6
- bottom: $expanded-bottom-height;
7
- top: $expanded-top-height;
8
- }
9
-
10
- .msp-layout-top {
11
- position: absolute;
12
- left: $expanded-left-width;
13
- right: $expanded-right-width;
14
- height: $expanded-top-height;
15
- top: 0;
16
- border-bottom: 1px solid $border-color;
17
- }
18
-
19
- .msp-layout-bottom {
20
- position: absolute;
21
- left: $expanded-left-width;
22
- right: $expanded-right-width;
23
- height: $expanded-bottom-height;
24
- bottom: 0;
25
- border-top: 1px solid $border-color;
26
- }
27
-
28
- .msp-layout-right {
29
- position: absolute;
30
- width: $expanded-right-width;
31
- right: 0;
32
- bottom: 0;
33
- top: 0;
34
- border-left: 1px solid $border-color;
35
- }
36
-
37
- .msp-layout-left {
38
- position: absolute;
39
- width: $expanded-left-width;
40
- left: 0;
41
- bottom: 0;
42
- top: 0;
43
- border-right: 1px solid $border-color;
44
- }
45
-
46
- .msp-layout-hide-right {
47
- .msp-layout-right {
48
- display: none;
49
- }
50
- .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
51
- right: 0;
52
- }
53
- }
54
-
55
-
56
- .msp-layout-hide-left {
57
- .msp-layout-left {
58
- display: none;
59
- }
60
- .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
61
- left: 0;
62
- }
63
- }
64
-
65
- .msp-layout-collapse-left {
66
- .msp-layout-left {
67
- width: $collapsed-left-width;
68
- }
69
- .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
70
- left: $collapsed-left-width;
71
- }
72
- }
73
-
74
- .msp-layout-hide-bottom {
75
- .msp-layout-bottom {
76
- display: none;
77
- }
78
- .msp-layout-main {
79
- bottom: 0;
80
- }
81
- }
82
-
83
- .msp-layout-hide-top {
84
- .msp-layout-top {
85
- display: none;
86
- }
87
- .msp-layout-main {
88
- top: 0;
89
- }
1
+ 
2
+ .msp-layout-main {
3
+ position: absolute;
4
+ left: $expanded-left-width;
5
+ right: $expanded-right-width;
6
+ bottom: $expanded-bottom-height;
7
+ top: $expanded-top-height;
8
+ }
9
+
10
+ .msp-layout-top {
11
+ position: absolute;
12
+ left: $expanded-left-width;
13
+ right: $expanded-right-width;
14
+ height: $expanded-top-height;
15
+ top: 0;
16
+ border-bottom: 1px solid $border-color;
17
+ }
18
+
19
+ .msp-layout-bottom {
20
+ position: absolute;
21
+ left: $expanded-left-width;
22
+ right: $expanded-right-width;
23
+ height: $expanded-bottom-height;
24
+ bottom: 0;
25
+ border-top: 1px solid $border-color;
26
+ }
27
+
28
+ .msp-layout-right {
29
+ position: absolute;
30
+ width: $expanded-right-width;
31
+ right: 0;
32
+ bottom: 0;
33
+ top: 0;
34
+ border-left: 1px solid $border-color;
35
+ }
36
+
37
+ .msp-layout-left {
38
+ position: absolute;
39
+ width: $expanded-left-width;
40
+ left: 0;
41
+ bottom: 0;
42
+ top: 0;
43
+ border-right: 1px solid $border-color;
44
+ }
45
+
46
+ .msp-layout-hide-right {
47
+ .msp-layout-right {
48
+ display: none;
49
+ }
50
+ .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
51
+ right: 0;
52
+ }
53
+ }
54
+
55
+
56
+ .msp-layout-hide-left {
57
+ .msp-layout-left {
58
+ display: none;
59
+ }
60
+ .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
61
+ left: 0;
62
+ }
63
+ }
64
+
65
+ .msp-layout-collapse-left {
66
+ .msp-layout-left {
67
+ width: $collapsed-left-width;
68
+ }
69
+ .msp-layout-main, .msp-layout-top, .msp-layout-bottom {
70
+ left: $collapsed-left-width;
71
+ }
72
+ }
73
+
74
+ .msp-layout-hide-bottom {
75
+ .msp-layout-bottom {
76
+ display: none;
77
+ }
78
+ .msp-layout-main {
79
+ bottom: 0;
80
+ }
81
+ }
82
+
83
+ .msp-layout-hide-top {
84
+ .msp-layout-top {
85
+ display: none;
86
+ }
87
+ .msp-layout-main {
88
+ top: 0;
89
+ }
90
90
  }