dsh-aris-panel 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (442) hide show
  1. package/LICENSE +21 -0
  2. package/README.md +98 -0
  3. package/README_CN.md +87 -0
  4. package/dsh/checkout.patch.yml +38 -0
  5. package/dsh/client.js +634 -0
  6. package/dsh/cordis.patch.yml +44 -0
  7. package/dsh/index.mjs +76 -0
  8. package/dsh/run-status.mjs +182 -0
  9. package/dsh/scope-limits.mjs +50 -0
  10. package/dsh/workbench.mjs +291 -0
  11. package/mcp-servers/claude-review/README.md +93 -0
  12. package/mcp-servers/claude-review/run_with_claude_aws.sh +49 -0
  13. package/mcp-servers/claude-review/server.py +718 -0
  14. package/mcp-servers/codex-image2/README.md +65 -0
  15. package/mcp-servers/codex-image2/server.py +893 -0
  16. package/mcp-servers/feishu-bridge/requirements.txt +1 -0
  17. package/mcp-servers/feishu-bridge/server.py +240 -0
  18. package/mcp-servers/gemini-review/README.md +171 -0
  19. package/mcp-servers/gemini-review/server.py +1856 -0
  20. package/mcp-servers/llm-chat/requirements.txt +1 -0
  21. package/mcp-servers/llm-chat/server.py +664 -0
  22. package/mcp-servers/manual-review/README.md +133 -0
  23. package/mcp-servers/manual-review/server.py +910 -0
  24. package/mcp-servers/manual-review/ui.html +279 -0
  25. package/mcp-servers/minimax-chat/requirements.txt +1 -0
  26. package/mcp-servers/minimax-chat/server.py +381 -0
  27. package/package.json +51 -0
  28. package/skills/ablation-planner/SKILL.md +123 -0
  29. package/skills/alphaxiv/SKILL.md +196 -0
  30. package/skills/analyze-results/SKILL.md +46 -0
  31. package/skills/arxiv/SKILL.md +248 -0
  32. package/skills/auto-paper-improvement-loop/SKILL.md +651 -0
  33. package/skills/auto-review-loop/SKILL.md +1137 -0
  34. package/skills/auto-review-loop-llm/SKILL.md +259 -0
  35. package/skills/auto-review-loop-minimax/SKILL.md +302 -0
  36. package/skills/citation-audit/SKILL.md +502 -0
  37. package/skills/claims-drafting/SKILL.md +227 -0
  38. package/skills/comm-lit-review/SKILL.md +297 -0
  39. package/skills/deepxiv/SKILL.md +263 -0
  40. package/skills/dse-loop/SKILL.md +296 -0
  41. package/skills/embodiment-description/SKILL.md +129 -0
  42. package/skills/exa-search/SKILL.md +205 -0
  43. package/skills/experiment-audit/SKILL.md +311 -0
  44. package/skills/experiment-bridge/SKILL.md +376 -0
  45. package/skills/experiment-plan/SKILL.md +249 -0
  46. package/skills/experiment-queue/SKILL.md +431 -0
  47. package/skills/experiment-queue/scripts/build_manifest.py +142 -0
  48. package/skills/experiment-queue/scripts/queue_manager.py +433 -0
  49. package/skills/feishu-notify/SKILL.md +156 -0
  50. package/skills/figure-description/SKILL.md +138 -0
  51. package/skills/figure-spec/SKILL.md +262 -0
  52. package/skills/figure-spec/scripts/figure_renderer.py +799 -0
  53. package/skills/formula-derivation/SKILL.md +280 -0
  54. package/skills/gemini-search/SKILL.md +231 -0
  55. package/skills/grant-proposal/SKILL.md +698 -0
  56. package/skills/idea-creator/SKILL.md +542 -0
  57. package/skills/idea-discovery/SKILL.md +521 -0
  58. package/skills/idea-discovery-robot/SKILL.md +363 -0
  59. package/skills/integrity-forensics/SKILL.md +284 -0
  60. package/skills/interview-cheatsheet/SKILL.md +245 -0
  61. package/skills/invention-structuring/SKILL.md +188 -0
  62. package/skills/jurisdiction-format/SKILL.md +192 -0
  63. package/skills/kill-argument/SKILL.md +437 -0
  64. package/skills/mermaid-diagram/SKILL.md +419 -0
  65. package/skills/meta-apply/SKILL.md +141 -0
  66. package/skills/meta-optimize/SKILL.md +437 -0
  67. package/skills/monitor-experiment/SKILL.md +140 -0
  68. package/skills/novelty-check/SKILL.md +101 -0
  69. package/skills/openalex/SKILL.md +237 -0
  70. package/skills/overleaf-sync/SKILL.md +220 -0
  71. package/skills/paper-claim-audit/SKILL.md +348 -0
  72. package/skills/paper-compile/SKILL.md +266 -0
  73. package/skills/paper-figure/SKILL.md +312 -0
  74. package/skills/paper-illustration/SKILL.md +736 -0
  75. package/skills/paper-illustration-image2/SKILL.md +391 -0
  76. package/skills/paper-illustration-image2/scripts/paper_illustration_image2.py +255 -0
  77. package/skills/paper-plan/SKILL.md +386 -0
  78. package/skills/paper-poster/SKILL.md +19 -0
  79. package/skills/paper-poster-html/DESIGN_FINAL.md +176 -0
  80. package/skills/paper-poster-html/IMPLEMENTATION_CONVENTIONS.md +161 -0
  81. package/skills/paper-poster-html/LICENSES/posterly-MIT.txt +21 -0
  82. package/skills/paper-poster-html/NOTICE.md +57 -0
  83. package/skills/paper-poster-html/SKILL.md +323 -0
  84. package/skills/paper-poster-html/scripts/_posterly/__init__.py +0 -0
  85. package/skills/paper-poster-html/scripts/_posterly/canvas.py +200 -0
  86. package/skills/paper-poster-html/scripts/_posterly/measure.py +588 -0
  87. package/skills/paper-poster-html/scripts/_posterly/polish.py +498 -0
  88. package/skills/paper-poster-html/scripts/_posterly/preflight.py +489 -0
  89. package/skills/paper-poster-html/scripts/_posterly/render.py +215 -0
  90. package/skills/paper-poster-html/scripts/_posterly/textutil.py +16 -0
  91. package/skills/paper-poster-html/scripts/_posterly/verify_final.py +171 -0
  92. package/skills/paper-poster-html/scripts/asset_check.py +897 -0
  93. package/skills/paper-poster-html/scripts/extract_pdf_figures.py +666 -0
  94. package/skills/paper-poster-html/scripts/poster_check.py +251 -0
  95. package/skills/paper-poster-html/scripts/preprocess_figures.py +238 -0
  96. package/skills/paper-poster-html/scripts/render_preview.py +217 -0
  97. package/skills/paper-poster-html/scripts/run_gates.py +556 -0
  98. package/skills/paper-poster-html/scripts/style_check.py +1324 -0
  99. package/skills/paper-poster-html/templates/COMPONENTS.md +462 -0
  100. package/skills/paper-poster-html/templates/README.md +170 -0
  101. package/skills/paper-poster-html/templates/landscape_4col.html +1032 -0
  102. package/skills/paper-poster-html/templates/landscape_hero.html +1046 -0
  103. package/skills/paper-poster-html/templates/portrait_2col.html +947 -0
  104. package/skills/paper-poster-html/templates/tokens/acl.json +9 -0
  105. package/skills/paper-poster-html/templates/tokens/cvpr.json +9 -0
  106. package/skills/paper-poster-html/templates/tokens/generic.json +9 -0
  107. package/skills/paper-poster-html/templates/tokens/iclr.json +9 -0
  108. package/skills/paper-poster-html/templates/tokens/icml.json +9 -0
  109. package/skills/paper-poster-html/templates/tokens/neurips.json +9 -0
  110. package/skills/paper-slides/SKILL.md +635 -0
  111. package/skills/paper-talk/SKILL.md +381 -0
  112. package/skills/paper-write/SKILL.md +604 -0
  113. package/skills/paper-write/templates/IEEEtran.bst +2409 -0
  114. package/skills/paper-write/templates/IEEEtran.cls +6347 -0
  115. package/skills/paper-write/templates/iclr2026.tex +84 -0
  116. package/skills/paper-write/templates/icml2025.tex +87 -0
  117. package/skills/paper-write/templates/ieee_conference.tex +89 -0
  118. package/skills/paper-write/templates/ieee_journal.tex +93 -0
  119. package/skills/paper-write/templates/math_commands.tex +48 -0
  120. package/skills/paper-write/templates/neurips2025.tex +80 -0
  121. package/skills/paper-writing/SKILL.md +916 -0
  122. package/skills/patent-novelty-check/SKILL.md +153 -0
  123. package/skills/patent-pipeline/SKILL.md +344 -0
  124. package/skills/patent-review/SKILL.md +203 -0
  125. package/skills/pixel-art/SKILL.md +137 -0
  126. package/skills/prior-art-search/SKILL.md +146 -0
  127. package/skills/proof-checker/SKILL.md +866 -0
  128. package/skills/proof-orchestrator/NOTICE.md +24 -0
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  130. package/skills/proof-orchestrator/references/audit-output-contract.md +126 -0
  131. package/skills/proof-orchestrator/references/deepseek-routing.md +74 -0
  132. package/skills/proof-orchestrator/references/dispatch-prompts.md +227 -0
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  140. package/skills/render-html/scripts/render_html.py +1006 -0
  141. package/skills/render-html/scripts/templates/academic.html +703 -0
  142. package/skills/render-html/scripts/templates/dashboard.html +333 -0
  143. package/skills/research-lit/SKILL.md +756 -0
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  145. package/skills/research-refine/SKILL.md +770 -0
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  158. package/skills/shared-references/compute-env-contract.md +163 -0
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  160. package/skills/shared-references/evidence-precheck.md +65 -0
  161. package/skills/shared-references/experiment-integrity.md +49 -0
  162. package/skills/shared-references/external-cadence.md +326 -0
  163. package/skills/shared-references/fan-out-pattern.md +366 -0
  164. package/skills/shared-references/injection-hygiene.md +127 -0
  165. package/skills/shared-references/integration-contract.md +461 -0
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  431. package/tools/semantic_scholar_fetch.py +438 -0
  432. package/tools/skill-groups.tsv +116 -0
  433. package/tools/skill_picker.py +238 -0
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  442. package/tools/watchdog.py +485 -0
@@ -0,0 +1,238 @@
1
+ #!/usr/bin/env python3
2
+ """Interactive checkbox picker for ARIS selective install (#366).
3
+
4
+ Reads the skill catalog (tools/skill-groups.tsv) plus the set of available
5
+ upstream skills, renders a curses checkbox tree (groups with their skills
6
+ indented below), and writes the confirmed selection to --out, one skill
7
+ name per line.
8
+
9
+ Keys:
10
+ Up/Down, j/k move cursor
11
+ Space toggle item under cursor — on a group row this toggles
12
+ ALL of the group's skills (all-on -> all-off, else all-on)
13
+ a / n select all / select none
14
+ PgUp/PgDn page
15
+ Enter confirm selection
16
+ q / Esc abort
17
+
18
+ Exit codes:
19
+ 0 confirmed (--out written)
20
+ 1 user aborted
21
+ 2 environment unusable (no curses/tty) — caller should fall back to the
22
+ classic per-group prompts
23
+
24
+ The selection model is pure-python and unit-tested in
25
+ tests/test_skill_picker.py; only run_picker() touches curses.
26
+ """
27
+ import argparse
28
+ import sys
29
+
30
+ UNGROUPED = ("ungrouped", "未分组", "上游存在但 catalog 尚未归组的 skill")
31
+
32
+
33
+ def parse_catalog(path):
34
+ """Return (groups, skills): groups = [(gid, display, desc)] in file order;
35
+ skills = {name: (group, requires_list, desc)}."""
36
+ groups, skills = [], {}
37
+ with open(path, encoding="utf-8") as fh:
38
+ for line in fh:
39
+ line = line.rstrip("\n")
40
+ if not line or line.startswith("#"):
41
+ continue
42
+ fields = line.split("\t")
43
+ if fields[0] == "group" and len(fields) >= 4:
44
+ groups.append((fields[1], fields[2], fields[3]))
45
+ elif fields[0] == "skill" and len(fields) >= 4:
46
+ requires = [] if fields[3] == "-" else fields[3].split(",")
47
+ desc = fields[4] if len(fields) >= 5 else ""
48
+ skills[fields[1]] = (fields[2], requires, desc)
49
+ return groups, skills
50
+
51
+
52
+ class Row:
53
+ __slots__ = ("kind", "name", "display", "desc", "group", "has_deps")
54
+
55
+ def __init__(self, kind, name, display, desc, group=None, has_deps=False):
56
+ self.kind = kind # "group" | "skill"
57
+ self.name = name
58
+ self.display = display
59
+ self.desc = desc
60
+ self.group = group # group id for skill rows
61
+ self.has_deps = has_deps
62
+
63
+
64
+ def build_rows(groups, skills, available):
65
+ """Flatten catalog + available set into display rows. Available skills the
66
+ catalog doesn't know land in a trailing pseudo-group (never dropped)."""
67
+ rows = []
68
+ seen = set()
69
+ for gid, display, desc in groups:
70
+ members = [n for n in available if n in skills and skills[n][0] == gid]
71
+ if not members:
72
+ continue
73
+ rows.append(Row("group", gid, display, desc))
74
+ for name in members:
75
+ _, requires, sdesc = skills[name]
76
+ rows.append(Row("skill", name, name, sdesc, gid, bool(requires)))
77
+ seen.add(name)
78
+ orphans = [n for n in available if n not in seen]
79
+ if orphans:
80
+ gid, display, desc = UNGROUPED
81
+ rows.append(Row("group", gid, display, desc))
82
+ for name in orphans:
83
+ rows.append(Row("skill", name, name, "", gid))
84
+ return rows
85
+
86
+
87
+ def group_members(rows, gid):
88
+ return [r.name for r in rows if r.kind == "skill" and r.group == gid]
89
+
90
+
91
+ def group_state(rows, gid, selected):
92
+ """'all' | 'some' | 'none' for a group's selection state."""
93
+ members = group_members(rows, gid)
94
+ hit = sum(1 for m in members if m in selected)
95
+ if hit == 0:
96
+ return "none"
97
+ return "all" if hit == len(members) else "some"
98
+
99
+
100
+ def toggle(rows, idx, selected):
101
+ """Space semantics: skill toggles itself; group toggles all members
102
+ (all-selected -> none, anything else -> all)."""
103
+ row = rows[idx]
104
+ if row.kind == "skill":
105
+ if row.name in selected:
106
+ selected.discard(row.name)
107
+ else:
108
+ selected.add(row.name)
109
+ return
110
+ members = group_members(rows, row.name)
111
+ if group_state(rows, row.name, selected) == "all":
112
+ selected.difference_update(members)
113
+ else:
114
+ selected.update(members)
115
+
116
+
117
+ def render_line(rows, idx, selected, width):
118
+ """One display line (no curses dependency, unit-testable)."""
119
+ row = rows[idx]
120
+ if row.kind == "group":
121
+ mark = {"all": "[*]", "some": "[~]", "none": "[ ]"}[
122
+ group_state(rows, row.name, selected)
123
+ ]
124
+ members = group_members(rows, row.name)
125
+ hit = sum(1 for m in members if m in selected)
126
+ line = "%s %s %s — %s (%d/%d)" % (
127
+ mark, row.name, row.display, row.desc, hit, len(members))
128
+ else:
129
+ mark = "[x]" if row.name in selected else "[ ]"
130
+ dep = " (+依赖自动带入)" if row.has_deps else ""
131
+ desc = (" %s" % row.desc) if row.desc else ""
132
+ line = " %s %s%s%s" % (mark, row.display, desc, dep)
133
+ return line[: max(1, width - 1)]
134
+
135
+
136
+ HEADER = "ARIS skill 选择 — Space 勾选(组行=整组) · a 全选 · n 清空 · Enter 确认 · q 退出"
137
+
138
+
139
+ def run_picker(rows, selected): # pragma: no cover — curses UI, tested via pty
140
+ import curses
141
+
142
+ def main(stdscr):
143
+ # Some terminals support curses drawing but not cursor visibility changes.
144
+ try:
145
+ curses.curs_set(0)
146
+ except curses.error:
147
+ pass
148
+ stdscr.keypad(True)
149
+ cursor, offset = 0, 0
150
+ while True:
151
+ height, width = stdscr.getmaxyx()
152
+ body = height - 3
153
+ if cursor < offset:
154
+ offset = cursor
155
+ if cursor >= offset + body:
156
+ offset = cursor - body + 1
157
+ stdscr.erase()
158
+ stdscr.addnstr(0, 0, HEADER, width - 1, curses.A_BOLD)
159
+ for i in range(offset, min(len(rows), offset + body)):
160
+ attr = curses.A_REVERSE if i == cursor else curses.A_NORMAL
161
+ if rows[i].kind == "group" and i != cursor:
162
+ attr |= curses.A_BOLD
163
+ stdscr.addnstr(2 + i - offset, 0,
164
+ render_line(rows, i, selected, width),
165
+ width - 1, attr)
166
+ n_skills = sum(1 for r in rows if r.kind == "skill")
167
+ stdscr.addnstr(height - 1, 0,
168
+ " 已选 %d / %d " % (len(selected), n_skills),
169
+ width - 1, curses.A_REVERSE)
170
+ stdscr.refresh()
171
+ key = stdscr.getch()
172
+ if key in (curses.KEY_UP, ord("k")):
173
+ cursor = max(0, cursor - 1)
174
+ elif key in (curses.KEY_DOWN, ord("j")):
175
+ cursor = min(len(rows) - 1, cursor + 1)
176
+ elif key == curses.KEY_PPAGE:
177
+ cursor = max(0, cursor - body)
178
+ elif key == curses.KEY_NPAGE:
179
+ cursor = min(len(rows) - 1, cursor + body)
180
+ elif key == ord(" "):
181
+ toggle(rows, cursor, selected)
182
+ elif key == ord("a"):
183
+ selected.update(r.name for r in rows if r.kind == "skill")
184
+ elif key == ord("n"):
185
+ selected.clear()
186
+ elif key in (curses.KEY_ENTER, 10, 13):
187
+ return True
188
+ elif key in (ord("q"), 27):
189
+ return False
190
+
191
+ return curses.wrapper(main)
192
+
193
+
194
+ def main(argv=None):
195
+ ap = argparse.ArgumentParser(description=__doc__)
196
+ ap.add_argument("--catalog", required=True)
197
+ ap.add_argument("--available", required=True,
198
+ help="file with one available upstream skill name per line")
199
+ ap.add_argument("--out", required=True,
200
+ help="file to write the selected skill names to")
201
+ ap.add_argument("--preselect",
202
+ help="optional file with names to pre-check")
203
+ args = ap.parse_args(argv)
204
+
205
+ groups, skills = parse_catalog(args.catalog)
206
+ with open(args.available, encoding="utf-8") as fh:
207
+ available = [l.strip() for l in fh if l.strip()]
208
+ rows = build_rows(groups, skills, available)
209
+ if not rows:
210
+ print("skill_picker: nothing available to select", file=sys.stderr)
211
+ return 2
212
+
213
+ selected = set()
214
+ if args.preselect:
215
+ with open(args.preselect, encoding="utf-8") as fh:
216
+ selected = {l.strip() for l in fh if l.strip()} & set(available)
217
+
218
+ if not (sys.stdin.isatty() and sys.stdout.isatty()):
219
+ print("skill_picker: no tty — falling back", file=sys.stderr)
220
+ return 2
221
+ try:
222
+ confirmed = run_picker(rows, selected)
223
+ except Exception as exc: # curses import/terminal failures → fallback
224
+ print("skill_picker: %s — falling back" % exc, file=sys.stderr)
225
+ return 2
226
+
227
+ if not confirmed:
228
+ return 1
229
+ order = [r.name for r in rows if r.kind == "skill"]
230
+ with open(args.out, "w", encoding="utf-8") as fh:
231
+ for name in order:
232
+ if name in selected:
233
+ fh.write(name + "\n")
234
+ return 0
235
+
236
+
237
+ if __name__ == "__main__":
238
+ sys.exit(main())