dsh-aris-panel 0.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (442) hide show
  1. package/LICENSE +21 -0
  2. package/README.md +98 -0
  3. package/README_CN.md +87 -0
  4. package/dsh/checkout.patch.yml +38 -0
  5. package/dsh/client.js +634 -0
  6. package/dsh/cordis.patch.yml +44 -0
  7. package/dsh/index.mjs +76 -0
  8. package/dsh/run-status.mjs +182 -0
  9. package/dsh/scope-limits.mjs +50 -0
  10. package/dsh/workbench.mjs +291 -0
  11. package/mcp-servers/claude-review/README.md +93 -0
  12. package/mcp-servers/claude-review/run_with_claude_aws.sh +49 -0
  13. package/mcp-servers/claude-review/server.py +718 -0
  14. package/mcp-servers/codex-image2/README.md +65 -0
  15. package/mcp-servers/codex-image2/server.py +893 -0
  16. package/mcp-servers/feishu-bridge/requirements.txt +1 -0
  17. package/mcp-servers/feishu-bridge/server.py +240 -0
  18. package/mcp-servers/gemini-review/README.md +171 -0
  19. package/mcp-servers/gemini-review/server.py +1856 -0
  20. package/mcp-servers/llm-chat/requirements.txt +1 -0
  21. package/mcp-servers/llm-chat/server.py +664 -0
  22. package/mcp-servers/manual-review/README.md +133 -0
  23. package/mcp-servers/manual-review/server.py +910 -0
  24. package/mcp-servers/manual-review/ui.html +279 -0
  25. package/mcp-servers/minimax-chat/requirements.txt +1 -0
  26. package/mcp-servers/minimax-chat/server.py +381 -0
  27. package/package.json +51 -0
  28. package/skills/ablation-planner/SKILL.md +123 -0
  29. package/skills/alphaxiv/SKILL.md +196 -0
  30. package/skills/analyze-results/SKILL.md +46 -0
  31. package/skills/arxiv/SKILL.md +248 -0
  32. package/skills/auto-paper-improvement-loop/SKILL.md +651 -0
  33. package/skills/auto-review-loop/SKILL.md +1137 -0
  34. package/skills/auto-review-loop-llm/SKILL.md +259 -0
  35. package/skills/auto-review-loop-minimax/SKILL.md +302 -0
  36. package/skills/citation-audit/SKILL.md +502 -0
  37. package/skills/claims-drafting/SKILL.md +227 -0
  38. package/skills/comm-lit-review/SKILL.md +297 -0
  39. package/skills/deepxiv/SKILL.md +263 -0
  40. package/skills/dse-loop/SKILL.md +296 -0
  41. package/skills/embodiment-description/SKILL.md +129 -0
  42. package/skills/exa-search/SKILL.md +205 -0
  43. package/skills/experiment-audit/SKILL.md +311 -0
  44. package/skills/experiment-bridge/SKILL.md +376 -0
  45. package/skills/experiment-plan/SKILL.md +249 -0
  46. package/skills/experiment-queue/SKILL.md +431 -0
  47. package/skills/experiment-queue/scripts/build_manifest.py +142 -0
  48. package/skills/experiment-queue/scripts/queue_manager.py +433 -0
  49. package/skills/feishu-notify/SKILL.md +156 -0
  50. package/skills/figure-description/SKILL.md +138 -0
  51. package/skills/figure-spec/SKILL.md +262 -0
  52. package/skills/figure-spec/scripts/figure_renderer.py +799 -0
  53. package/skills/formula-derivation/SKILL.md +280 -0
  54. package/skills/gemini-search/SKILL.md +231 -0
  55. package/skills/grant-proposal/SKILL.md +698 -0
  56. package/skills/idea-creator/SKILL.md +542 -0
  57. package/skills/idea-discovery/SKILL.md +521 -0
  58. package/skills/idea-discovery-robot/SKILL.md +363 -0
  59. package/skills/integrity-forensics/SKILL.md +284 -0
  60. package/skills/interview-cheatsheet/SKILL.md +245 -0
  61. package/skills/invention-structuring/SKILL.md +188 -0
  62. package/skills/jurisdiction-format/SKILL.md +192 -0
  63. package/skills/kill-argument/SKILL.md +437 -0
  64. package/skills/mermaid-diagram/SKILL.md +419 -0
  65. package/skills/meta-apply/SKILL.md +141 -0
  66. package/skills/meta-optimize/SKILL.md +437 -0
  67. package/skills/monitor-experiment/SKILL.md +140 -0
  68. package/skills/novelty-check/SKILL.md +101 -0
  69. package/skills/openalex/SKILL.md +237 -0
  70. package/skills/overleaf-sync/SKILL.md +220 -0
  71. package/skills/paper-claim-audit/SKILL.md +348 -0
  72. package/skills/paper-compile/SKILL.md +266 -0
  73. package/skills/paper-figure/SKILL.md +312 -0
  74. package/skills/paper-illustration/SKILL.md +736 -0
  75. package/skills/paper-illustration-image2/SKILL.md +391 -0
  76. package/skills/paper-illustration-image2/scripts/paper_illustration_image2.py +255 -0
  77. package/skills/paper-plan/SKILL.md +386 -0
  78. package/skills/paper-poster/SKILL.md +19 -0
  79. package/skills/paper-poster-html/DESIGN_FINAL.md +176 -0
  80. package/skills/paper-poster-html/IMPLEMENTATION_CONVENTIONS.md +161 -0
  81. package/skills/paper-poster-html/LICENSES/posterly-MIT.txt +21 -0
  82. package/skills/paper-poster-html/NOTICE.md +57 -0
  83. package/skills/paper-poster-html/SKILL.md +323 -0
  84. package/skills/paper-poster-html/scripts/_posterly/__init__.py +0 -0
  85. package/skills/paper-poster-html/scripts/_posterly/canvas.py +200 -0
  86. package/skills/paper-poster-html/scripts/_posterly/measure.py +588 -0
  87. package/skills/paper-poster-html/scripts/_posterly/polish.py +498 -0
  88. package/skills/paper-poster-html/scripts/_posterly/preflight.py +489 -0
  89. package/skills/paper-poster-html/scripts/_posterly/render.py +215 -0
  90. package/skills/paper-poster-html/scripts/_posterly/textutil.py +16 -0
  91. package/skills/paper-poster-html/scripts/_posterly/verify_final.py +171 -0
  92. package/skills/paper-poster-html/scripts/asset_check.py +897 -0
  93. package/skills/paper-poster-html/scripts/extract_pdf_figures.py +666 -0
  94. package/skills/paper-poster-html/scripts/poster_check.py +251 -0
  95. package/skills/paper-poster-html/scripts/preprocess_figures.py +238 -0
  96. package/skills/paper-poster-html/scripts/render_preview.py +217 -0
  97. package/skills/paper-poster-html/scripts/run_gates.py +556 -0
  98. package/skills/paper-poster-html/scripts/style_check.py +1324 -0
  99. package/skills/paper-poster-html/templates/COMPONENTS.md +462 -0
  100. package/skills/paper-poster-html/templates/README.md +170 -0
  101. package/skills/paper-poster-html/templates/landscape_4col.html +1032 -0
  102. package/skills/paper-poster-html/templates/landscape_hero.html +1046 -0
  103. package/skills/paper-poster-html/templates/portrait_2col.html +947 -0
  104. package/skills/paper-poster-html/templates/tokens/acl.json +9 -0
  105. package/skills/paper-poster-html/templates/tokens/cvpr.json +9 -0
  106. package/skills/paper-poster-html/templates/tokens/generic.json +9 -0
  107. package/skills/paper-poster-html/templates/tokens/iclr.json +9 -0
  108. package/skills/paper-poster-html/templates/tokens/icml.json +9 -0
  109. package/skills/paper-poster-html/templates/tokens/neurips.json +9 -0
  110. package/skills/paper-slides/SKILL.md +635 -0
  111. package/skills/paper-talk/SKILL.md +381 -0
  112. package/skills/paper-write/SKILL.md +604 -0
  113. package/skills/paper-write/templates/IEEEtran.bst +2409 -0
  114. package/skills/paper-write/templates/IEEEtran.cls +6347 -0
  115. package/skills/paper-write/templates/iclr2026.tex +84 -0
  116. package/skills/paper-write/templates/icml2025.tex +87 -0
  117. package/skills/paper-write/templates/ieee_conference.tex +89 -0
  118. package/skills/paper-write/templates/ieee_journal.tex +93 -0
  119. package/skills/paper-write/templates/math_commands.tex +48 -0
  120. package/skills/paper-write/templates/neurips2025.tex +80 -0
  121. package/skills/paper-writing/SKILL.md +916 -0
  122. package/skills/patent-novelty-check/SKILL.md +153 -0
  123. package/skills/patent-pipeline/SKILL.md +344 -0
  124. package/skills/patent-review/SKILL.md +203 -0
  125. package/skills/pixel-art/SKILL.md +137 -0
  126. package/skills/prior-art-search/SKILL.md +146 -0
  127. package/skills/proof-checker/SKILL.md +866 -0
  128. package/skills/proof-orchestrator/NOTICE.md +24 -0
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  130. package/skills/proof-orchestrator/references/audit-output-contract.md +126 -0
  131. package/skills/proof-orchestrator/references/deepseek-routing.md +74 -0
  132. package/skills/proof-orchestrator/references/dispatch-prompts.md +227 -0
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  140. package/skills/render-html/scripts/render_html.py +1006 -0
  141. package/skills/render-html/scripts/templates/academic.html +703 -0
  142. package/skills/render-html/scripts/templates/dashboard.html +333 -0
  143. package/skills/research-lit/SKILL.md +756 -0
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  145. package/skills/research-refine/SKILL.md +770 -0
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  158. package/skills/shared-references/compute-env-contract.md +163 -0
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  160. package/skills/shared-references/evidence-precheck.md +65 -0
  161. package/skills/shared-references/experiment-integrity.md +49 -0
  162. package/skills/shared-references/external-cadence.md +326 -0
  163. package/skills/shared-references/fan-out-pattern.md +366 -0
  164. package/skills/shared-references/injection-hygiene.md +127 -0
  165. package/skills/shared-references/integration-contract.md +461 -0
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@@ -0,0 +1,184 @@
1
+ ---
2
+ name: writing-systems-papers
3
+ description: "Paragraph-level structural blueprint for 10-12 page systems papers targeting OSDI, SOSP, ASPLOS, NSDI, and EuroSys. Provides page allocation, paragraph templates, and writing patterns. Use when user says \"写系统论文\", \"systems paper structure\", \"OSDI paper\", \"SOSP paper\", or wants fine-grained structural guidance for a systems conference submission."
4
+ argument-hint: "[venue-or-section]"
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+ allowed-tools: Bash(*), Read, Write, Edit, Grep, Glob, WebSearch, WebFetch, mcp__codex__codex, mcp__codex__codex-reply
6
+ ---
7
+
8
+ # Writing Systems Papers: Paragraph-Level Blueprint
9
+
10
+ Structural guidance for **$ARGUMENTS**
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+
12
+ ## Relationship to Other ARIS Skills
13
+
14
+ - **paper-write**: General paper generation workflow with citation verification. This skill complements it with systems-specific structural blueprints.
15
+ - **paper-slides**: Conference presentation generation (Beamer+PPTX). Already covers talks — no overlap.
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+ - **paper-plan**: Research outline creation. Use paper-plan first, then this skill for paragraph-level structure.
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+
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+ **Boundary**: paper-write handles the generation workflow (LaTeX output, DBLP verification, section-by-section drafting). This skill provides the **structural skeleton** — page budgets, paragraph roles, and writing patterns specific to systems venues.
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+
20
+ ---
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+
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+ ## Page Allocation: 12-Page Systems Paper
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+
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+ | Section | Pages | Key Content |
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+ |---------|-------|-------------|
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+ | Abstract | ~0.25 | 150–250 words, 5 sentences |
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+ | S1 Introduction | 1.5–2 | Problem → Gap → Insight → Contributions |
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+ | S2 Background & Motivation | 1–1.5 | Terms + Production observations |
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+ | S3 Design | 3–4 | Architecture + Modules + Alternatives |
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+ | S4 Implementation | 0.5–1 | Prototype, LOC, engineering |
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+ | S5 Evaluation | 3–4 | Setup + E2E + Ablation + Scalability |
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+ | S6 Related Work | 1 | By methodology, explicit comparison |
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+ | S7 Conclusion | 0.5 | 3-sentence summary |
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+
35
+ ---
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+
37
+ ## Section Blueprints
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+
39
+ ### Abstract (5 sentences)
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+
41
+ ```text
42
+ S1: Problem context and importance
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+ S2: Gap in existing approaches
44
+ S3: Thesis — "X is better for Y in environment Z" (Irene Zhang formula)
45
+ S4: Approach summary + headline results
46
+ S5: Impact or availability
47
+ ```
48
+
49
+ Sources: Levin & Redell — "Can you state the new idea concisely?"; Irene Zhang — "abstract cannot use terms introduced in the paper."
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+
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+ ### S1 Introduction (1.5–2 pages)
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+
53
+ 1. **Problem** (~0.5p) — Domain + concrete numbers + why it matters
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+ 2. **Gap analysis** (~0.5p) — G1–Gn: specific shortcomings with evidence
55
+ 3. **Key insight** (1 para) — Thesis: "X is better for Y in Z"
56
+ 4. **Contributions** (~0.5p) — 3–5 numbered, testable claims with §N references
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+
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+ Pattern: hzwer Move 1 (territory) → Move 2 (niche) → Move 3 (occupy).
59
+
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+ ### S2 Background & Motivation (1–1.5 pages)
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+
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+ 1. **Technical background** (~0.5p) — Define-before-use (Gernot Heiser)
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+ 2. **Observations** (~0.5–1p) — O1, O2, O3 from production data → design insights
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+
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+ ### S3 Design (3–4 pages)
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+
67
+ 1. **Architecture overview** (~0.5p) — Diagram first (Yi Ding: "draw a picture first")
68
+ 2. **Module details** (~2–2.5p) — Per module: choice, alternatives, why
69
+ 3. **Trade-offs** (~0.5–1p) — Summary of design decisions
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+
71
+ Rule: "Every design choice must discuss alternatives" (Irene Zhang).
72
+
73
+ ### S4 Implementation (0.5–1 page)
74
+
75
+ Language, LOC, framework, key engineering decisions. Keep concise.
76
+
77
+ ### S5 Evaluation (3–4 pages)
78
+
79
+ 1. **Setup** (~0.5p) — Hardware, baselines, workloads, metrics
80
+ 2. **End-to-end** (~1–1.5p) — X vs baselines for Y on Z
81
+ 3. **Ablation** (~1–1.5p) — Remove each component, measure impact
82
+ 4. **Scalability** (~0.5p) — Behavior at increasing scale
83
+
84
+ **Three-statement rule** (Irene Zhang): Every conclusion stated as:
85
+ - Hypothesis (section opening)
86
+ - Conclusion (section closing)
87
+ - Caption (figure caption)
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+
89
+ ### S6 Related Work (1 page)
90
+
91
+ Group by methodology. For each group: what they do, limitation, how we differ.
92
+
93
+ ### S7 Conclusion (0.5 page)
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+
95
+ Three sentences: problem, solution, result. No new information.
96
+
97
+ ---
98
+
99
+ ## Writing Patterns
100
+
101
+ ### Pattern 1: Gap Analysis
102
+ Enumerate G1–Gn in intro → A1–An in design → verify in evaluation.
103
+ *Example*: Lucid (ASPLOS'23) — 5 gaps mapped to 5 answers.
104
+
105
+ ### Pattern 2: Observation-Driven
106
+ O1–O3 from production data → insights → design components.
107
+ *Example*: GFS (arXiv 2025) — 3 observations drive 3 components.
108
+
109
+ ### Pattern 3: Contribution List
110
+ Numbered contributions in intro, each with §N cross-reference.
111
+ *Example*: Blox (EuroSys'24) — 7 contributions; Sia (SOSP'23) — 5 contributions.
112
+
113
+ ### Pattern 4: Thesis Formula
114
+ "X is better for Y in Z" structures the entire paper.
115
+ Combine with other patterns for maximum impact.
116
+
117
+ ---
118
+
119
+ ## Conference Differences
120
+
121
+ > Always verify against current CFP — rules change yearly.
122
+
123
+ | Venue | Format | Pages | Camera-Ready |
124
+ |-------|--------|-------|-------------|
125
+ | OSDI | USENIX | 12 | 14 |
126
+ | NSDI | USENIX | 12 | 14 |
127
+ | SOSP | ACM SIGOPS | 12 | — |
128
+ | ASPLOS | ACM SIGPLAN | 11 | 13 |
129
+ | EuroSys | ACM | 12 | — |
130
+
131
+ Based on 2025/2026 CFPs.
132
+
133
+ ---
134
+
135
+ ## Workflow
136
+
137
+ ```text
138
+ 1. Determine venue and page limit
139
+ 2. Choose writing pattern (Gap/Observation/Contribution/Thesis)
140
+ 3. Allocate pages per section using the table above
141
+ 4. Draft Abstract following 5-sentence template
142
+ 5. Draft Introduction: Problem → Gap → Insight → Contributions
143
+ 6. Draft Motivation with production observations (if available)
144
+ 7. Draw architecture figure, then write Design
145
+ 8. Draft Implementation (concise)
146
+ 9. Draft Evaluation: setup → E2E → ablation → scalability
147
+ 10. Draft Related Work by methodology groups
148
+ 11. Draft Conclusion: 3 sentences
149
+ 12. Run pre-submission checklist
150
+ 13. Hand off to /paper-write for LaTeX generation and citation verification
151
+ ```
152
+
153
+ ---
154
+
155
+ ## Quick Self-Check
156
+
157
+ - [ ] Thesis follows "X is better for Y in Z"
158
+ - [ ] 3–5 numbered contributions with §N references
159
+ - [ ] Design discusses alternatives for every major choice
160
+ - [ ] Eval conclusions stated 3 times (hypothesis, result, caption)
161
+ - [ ] Related work grouped by methodology
162
+ - [ ] Page budget within venue limits
163
+ - [ ] No fabricated observations, traces, or results
164
+ - [ ] All citations verified (delegate to /paper-write)
165
+
166
+ ---
167
+
168
+ ## Academic Integrity
169
+
170
+ - Never fabricate observations, traces, or experimental results
171
+ - Never generate citations from memory — use /paper-write citation workflow
172
+ - Disclose LLM use per venue policy
173
+ - This blueprint provides structural guidance, not copy-paste text
174
+
175
+ ---
176
+
177
+ ## Authoritative Sources
178
+
179
+ 1. Levin & Redell — "How (and How Not) to Write a Good Systems Paper" (USENIX)
180
+ 2. Irene Zhang — "Hints on how to write an SOSP paper"
181
+ 3. Gernot Heiser — Style Guide + Paper Writing Talk
182
+ 4. Timothy Roscoe — "Writing reviews for systems conferences"
183
+ 5. Yi Ding — "How to write good systems papers?"
184
+ 6. hzwer & DingXiaoH — WritingAIPaper (GitHub)
@@ -0,0 +1,29 @@
1
+ # Project: {project-name}
2
+
3
+ ## Pipeline Status
4
+
5
+ ```yaml
6
+ stage: idle # idle | idea-discovery | implementation | training | review | paper
7
+ idea: "" # Current idea title (one line)
8
+ contract: "" # Path to research_contract.md (e.g., idea-stage/docs/research_contract.md)
9
+ current_branch: "" # Git branch for this idea
10
+ baseline: "" # Baseline numbers for comparison
11
+ training_status: idle # idle | running | complete | failed
12
+ language: en # en | zh — controls skill output language (see shared-references/output-language.md)
13
+ active_tasks: []
14
+ next: "" # Concrete next step
15
+ last_updated: "" # YYYY-MM-DD HH:mm — auto-updated by skills on every output write
16
+ ```
17
+
18
+ ## Project Constraints
19
+
20
+ - {constraint 1}
21
+ - {constraint 2}
22
+
23
+ ## Non-Goals
24
+
25
+ - {non-goal 1}
26
+
27
+ ## Compute Budget
28
+
29
+ - {budget details, e.g., "8x A100 for 24h via vast.ai"}
@@ -0,0 +1,47 @@
1
+ # Experiment Log
2
+
3
+ > **Complete record of all experiments run in this project.** Every experiment gets an entry — successful or not. This is the authoritative source for "what did we actually run and what happened?"
4
+ >
5
+ > **How it differs from EXPERIMENT_TRACKER.md:** The tracker (in `refine-logs/`) is an execution checklist (TODO → RUNNING → DONE). This log is a permanent record with full results, configs, and reproduction commands. The tracker tells you what's left to do; the log tells you what was done and what it showed.
6
+ >
7
+ > **Update rule:** Write an entry immediately after each experiment completes. Do not batch entries or wait until "later."
8
+
9
+ ## Experiment: [Descriptive Name]
10
+
11
+ **Date**: YYYY-MM-DD
12
+ **Idea**: [Which idea from IDEA_CANDIDATES.md]
13
+ **Goal**: [What this experiment tests — link to claim if applicable]
14
+
15
+ ### Setup
16
+ - **Method**: [Brief description of the approach]
17
+ - **Dataset**: [Name, split, size]
18
+ - **Baseline**: [What you compare against]
19
+ - **Hardware**: [Server, GPUs, time taken]
20
+ - **Config**: [Path to config file or key hyperparameters]
21
+
22
+ ### Results
23
+
24
+ | Method | Dataset | Metric-1 | Metric-2 | Notes |
25
+ |--------|---------|----------|----------|-------|
26
+ | Baseline | [dataset] | [number] | [number] | [reproduced / from paper] |
27
+ | Ours | [dataset] | [number] | [number] | [seeds, std if applicable] |
28
+
29
+ ### Verdict
30
+ - **Supports claim?** [Yes / Partially / No]
31
+ - **Key takeaway**: [One sentence — what did we learn?]
32
+
33
+ ### Reproduction
34
+ ```bash
35
+ # Command to reproduce this experiment
36
+ python train.py --config configs/exp01.yaml --seed 42
37
+ ```
38
+
39
+ ### WandB
40
+ - Run URL: [link]
41
+ - Run ID: [id]
42
+
43
+ ---
44
+
45
+ ## Experiment: [Next Experiment Name]
46
+
47
+ ...
@@ -0,0 +1,51 @@
1
+ # Experiment Plan
2
+
3
+ > **Template for Workflow 1.5 (`/experiment-bridge`).** Fill in, save as `refine-logs/EXPERIMENT_PLAN.md`, then run `/experiment-bridge`.
4
+
5
+ **Problem**: [What problem does your method solve?]
6
+ **Method Thesis**: [One-sentence description of your approach]
7
+
8
+ ## Claim Map
9
+
10
+ | Claim | Why It Matters | Minimum Convincing Evidence | Linked Blocks |
11
+ |-------|----------------|----------------------------|---------------|
12
+ | C1: [Main claim] | [Why] | [Evidence needed] | B1, B2 |
13
+ | C2: [Supporting claim] | [Why] | [Evidence needed] | B3 |
14
+
15
+ ## Experiment Blocks
16
+
17
+ ### Block 1: Main Result
18
+ - **Claim tested**: C1
19
+ - **Dataset / split / task**: [e.g., ImageNet val]
20
+ - **Compared systems**: [Your method vs. Baseline A vs. Baseline B]
21
+ - **Metrics**: [Primary: accuracy/PPL. Secondary: throughput]
22
+ - **Setup details**: [Backbone, optimizer, lr, epochs, seeds]
23
+ - **Success criterion**: [e.g., "> 2% accuracy over baseline"]
24
+ - **Failure interpretation**: [If negative, what does it mean?]
25
+ - **Priority**: MUST-RUN
26
+
27
+ ### Block 2: Ablation Study
28
+ - **Claim tested**: C1 (novelty isolation)
29
+ - **Compared systems**: [Full method, -component A, -component B]
30
+ - **Success criterion**: [Each component contributes > 0.5%]
31
+ - **Priority**: MUST-RUN
32
+
33
+ ### Block 3: [Additional Experiment]
34
+ - **Priority**: NICE-TO-HAVE
35
+
36
+ ## Run Order
37
+
38
+ | Milestone | Goal | Runs | Decision Gate | Cost |
39
+ |-----------|------|------|---------------|------|
40
+ | M0: Sanity | Pipeline works | 1 quick run | Loss decreases? | ~0.5h |
41
+ | M1: Baselines | Reproduce baselines | Block 3 | Numbers match? | ~4h |
42
+ | M2: Main | Full method | Block 1 | Meets criterion? | ~8h |
43
+ | M3: Ablation | Components | Block 2 | Each matters? | ~6h |
44
+
45
+ ## Compute Budget
46
+ - **Total estimated GPU-hours**: ~18h
47
+ - **Hardware**: [e.g., 4x RTX 3090]
48
+ - **Biggest bottleneck**: [e.g., baseline reproduction]
49
+
50
+ ## Risks
51
+ - **Risk**: [What could go wrong] → **Mitigation**: [How to handle it]
@@ -0,0 +1,53 @@
1
+ # 实验计划
2
+
3
+ > **Workflow 1.5 (`/experiment-bridge`) 的模板。** 填写后保存为 `refine-logs/EXPERIMENT_PLAN.md`,然后运行 `/experiment-bridge`。
4
+
5
+ **问题**: [你的方法解决什么问题?]
6
+ **方法论点**: [一句话描述你的方法]
7
+
8
+ ## Claim 映射
9
+
10
+ | Claim | 重要性 | 最低说服力证据 | 关联实验块 |
11
+ |-------|--------|---------------|-----------|
12
+ | C1: [主要 claim] | [为什么重要] | [需要的证据] | B1, B2 |
13
+ | C2: [辅助 claim] | [为什么重要] | [需要的证据] | B3 |
14
+
15
+ ## 实验块
16
+
17
+ ### 实验块 1: 主实验
18
+ - **验证 Claim**: C1
19
+ - **数据集 / 划分 / 任务**: [如:ImageNet val]
20
+ - **对比系统**: [你的方法 vs. 基线 A vs. 基线 B]
21
+ - **评估指标**: [主要:准确率/PPL。次要:吞吐量]
22
+ - **实验设置**: [骨干网络、优化器、学习率、训练轮数、随机种子]
23
+ - **成功标准**: [如:"> 基线 2% 准确率"]
24
+ - **失败解读**: [如果结果为负,意味着什么?]
25
+ - **优先级**: 必须运行
26
+
27
+ ### 实验块 2: 消融实验
28
+ - **验证 Claim**: C1(新颖性隔离)
29
+ - **对比系统**: [完整方法、去掉组件 A、去掉组件 B]
30
+ - **成功标准**: [每个组件贡献 > 0.5%]
31
+ - **优先级**: 必须运行
32
+
33
+ ### 实验块 3: [额外实验]
34
+ - **优先级**: 可选
35
+
36
+ ## 运行顺序
37
+
38
+ | 里程碑 | 目标 | 运行内容 | 决策关卡 | 预估耗时 |
39
+ |--------|------|---------|---------|---------|
40
+ | M0: 健全性检查 | 流程跑通 | 1 次快速运行 | loss 在下降? | ~0.5h |
41
+ | M1: 基线复现 | 复现基线结果 | 实验块 3 | 数值匹配? | ~4h |
42
+ | M2: 主实验 | 完整方法 | 实验块 1 | 达到标准? | ~8h |
43
+ | M3: 消融 | 组件验证 | 实验块 2 | 每个都有贡献? | ~6h |
44
+
45
+ ## 算力预算
46
+
47
+ - **预估总 GPU 小时**: ~18h
48
+ - **硬件**: [如:4x RTX 3090]
49
+ - **最大瓶颈**: [如:基线复现]
50
+
51
+ ## 风险
52
+
53
+ - **风险**: [可能出什么问题] → **缓解措施**: [如何应对]
@@ -0,0 +1,52 @@
1
+ # Findings
2
+
3
+ > **Cross-stage discovery log.** Records what you learn during experiments — both research insights about your method/claims and engineering lessons from debugging. Read on every session recovery, so keep entries concise.
4
+ >
5
+ > **Why this file exists:** Experiments produce discoveries that are critical for future decisions but don't belong in formal experiment reports. Without a central log, these get lost between sessions — and the next session repeats the same mistakes or misses important signals.
6
+
7
+ ---
8
+
9
+ # Research Findings
10
+
11
+ > Method-level insights: what works, what doesn't, and why. These directly inform your claims, experiment design, and paper narrative.
12
+
13
+ ## [YYYY-MM-DD] Topic
14
+ - Finding
15
+ - Evidence (wandb run, metric, dataset)
16
+
17
+ ## [YYYY-MM-DD] Example: Attention module ineffective on small datasets
18
+ - Our proposed attention mechanism shows no improvement on CIFAR-10 (acc 93.1 vs baseline 93.0) but +2.3% on ImageNet
19
+ - Hypothesis: the module needs sufficient spatial diversity to capture meaningful patterns; small-resolution inputs don't provide this
20
+ - Implication: restrict claims to medium/large-scale datasets
21
+
22
+ ## [YYYY-MM-DD] Example: Loss combination causes gradient explosion
23
+ - Combining L_contrastive + L_distill with equal weight → gradient norm >1000 after epoch 5
24
+ - Root cause: L_contrastive scale is ~10x larger than L_distill; needs rebalancing or gradient clipping
25
+ - Decision: weight ratio 0.1:1.0, gradient norm stable at ~5.0 after fix
26
+
27
+ ## [YYYY-MM-DD] Example: Key decision — dropped multi-scale approach
28
+ - Multi-scale variant adds 40% compute but only +0.3% accuracy over single-scale
29
+ - Not worth the complexity; claim reframed around efficiency rather than raw performance
30
+
31
+ ---
32
+
33
+ # Engineering Findings
34
+
35
+ > Infrastructure, environment, and debugging lessons. Prevents re-debugging the same issues in future sessions.
36
+
37
+ ## [YYYY-MM-DD] Topic
38
+ - Problem and root cause
39
+ - Fix applied
40
+
41
+ ## [YYYY-MM-DD] Example: OOM with gradient accumulation
42
+ - OOM on batch_size=32 with 4x GPU — gradient accumulation was doubling peak memory
43
+ - Fix: enabled gradient checkpointing; batch_size=32 now fits in 24GB
44
+
45
+ ## [YYYY-MM-DD] Example: Baseline reproduction gap
46
+ - Paper reports 95.5 on dataset-X; we get 93.2 with their official code
47
+ - Root cause: different data preprocessing (center crop vs resize-then-crop)
48
+ - Decision: use our preprocessing for fair comparison, document in paper
49
+
50
+ ## [YYYY-MM-DD] Example: WandB logging breaks DDP
51
+ - wandb.log() inside DDP forward pass causes hanging on multi-GPU
52
+ - Fix: wrap in `if dist.get_rank() == 0` guard
@@ -0,0 +1,47 @@
1
+ # Idea Candidates
2
+
3
+ > **Curated pool of viable ideas that survived novelty check and review.** Unlike `IDEA_REPORT.md` (raw brainstorm output with all 8-12 ideas), this file only contains ideas that are worth pursuing — filtered, scored, and ready to be selected.
4
+ >
5
+ > When the current idea fails (result-to-claim negative, or pivot needed), pick the next candidate from here instead of re-running the entire idea discovery pipeline.
6
+
7
+ ## Active Idea
8
+
9
+ **Current**: [Idea name] → see `docs/research_contract.md` for full context
10
+
11
+ ## Candidates
12
+
13
+ ### Candidate 1: [Idea Name]
14
+ - **One-line**: [What it does]
15
+ - **Novelty score**: X/10
16
+ - **Reviewer assessment**: [Key strength + key risk]
17
+ - **Pilot result**: [POSITIVE/NEGATIVE/NOT TESTED — one-line metric]
18
+ - **Estimated effort**: [GPU hours, implementation complexity]
19
+ - **Why not selected first**: [Reason — e.g., higher risk, needs more data, less novel]
20
+
21
+ ### Candidate 2: [Idea Name]
22
+ - **One-line**: [What it does]
23
+ - **Novelty score**: X/10
24
+ - **Reviewer assessment**: [Key strength + key risk]
25
+ - **Pilot result**: [POSITIVE/NEGATIVE/NOT TESTED]
26
+ - **Estimated effort**: [GPU hours, implementation complexity]
27
+ - **Why not selected first**: [Reason]
28
+
29
+ ### Candidate 3: [Idea Name]
30
+ ...
31
+
32
+ ## Killed Ideas
33
+
34
+ > Ideas that were evaluated and explicitly rejected. Kept here to avoid re-exploring dead ends.
35
+
36
+ ### [Killed Idea Name]
37
+ - **Kill reason**: [Why — e.g., not novel (found prior work X), infeasible (needs Y data), pilot negative]
38
+ - **Kill date**: YYYY-MM-DD
39
+ - **Source**: IDEA_REPORT.md, Idea #N
40
+
41
+ ## Idea Switch Log
42
+
43
+ > Track idea transitions to maintain context across switches.
44
+
45
+ | Date | From | To | Reason |
46
+ |------|------|----|--------|
47
+ | YYYY-MM-DD | [Previous idea] | [New idea] | [Why — e.g., result-to-claim negative, pivot after reviewer feedback] |
@@ -0,0 +1,47 @@
1
+ # Idea 候选池
2
+
3
+ > **经过新颖性检查和评审后存活的可行 idea 精选池。** 与 `idea-stage/IDEA_REPORT.md`(包含全部 8-12 个 idea 的原始头脑风暴输出)不同,本文件只包含值得推进的 idea — 已筛选、已评分、可直接选用。
4
+ >
5
+ > 当前 idea 失败时(result-to-claim 为负,或需要转向),从这里选择下一个候选,而不是重新运行整个 idea 发现流程。
6
+
7
+ ## 当前 Idea
8
+
9
+ **进行中**: [Idea 名称] → 详见 `idea-stage/docs/research_contract.md`
10
+
11
+ ## 候选列表
12
+
13
+ ### 候选 1: [Idea 名称]
14
+ - **一句话描述**: [做什么]
15
+ - **新颖性评分**: X/10
16
+ - **评审意见**: [核心优势 + 核心风险]
17
+ - **试点结果**: [正面/负面/未测试 — 一行指标]
18
+ - **预估工作量**: [GPU 小时数,实现复杂度]
19
+ - **未优先选择的原因**: [原因 — 如:风险较高、需要更多数据、新颖性较低]
20
+
21
+ ### 候选 2: [Idea 名称]
22
+ - **一句话描述**: [做什么]
23
+ - **新颖性评分**: X/10
24
+ - **评审意见**: [核心优势 + 核心风险]
25
+ - **试点结果**: [正面/负面/未测试]
26
+ - **预估工作量**: [GPU 小时数,实现复杂度]
27
+ - **未优先选择的原因**: [原因]
28
+
29
+ ### 候选 3: [Idea 名称]
30
+ ...
31
+
32
+ ## 已淘汰 Idea
33
+
34
+ > 经过评估后明确拒绝的 idea。保留在此以避免重复探索死胡同。
35
+
36
+ ### [已淘汰 Idea 名称]
37
+ - **淘汰原因**: [为什么 — 如:不够新颖(发现先前工作 X)、不可行(需要 Y 数据)、试点结果为负]
38
+ - **淘汰日期**: YYYY-MM-DD
39
+ - **来源**: idea-stage/IDEA_REPORT.md, Idea #N
40
+
41
+ ## Idea 切换日志
42
+
43
+ > 跟踪 idea 转换,在切换过程中保持上下文。
44
+
45
+ | 日期 | 从 | 到 | 原因 |
46
+ |------|----|----|------|
47
+ | YYYY-MM-DD | [之前的 idea] | [新 idea] | [为什么 — 如:result-to-claim 为负、评审反馈后转向] |
@@ -0,0 +1,87 @@
1
+ # Invention Brief
2
+
3
+ > **Template for input to `/patent-pipeline`.** Provide detailed invention disclosure instead of a one-line prompt. Supports both structured and conversational input.
4
+
5
+ ## Title (发明名称)
6
+ [A concise title reflecting the technical content. e.g., "一种基于注意力机制的图像去噪方法及装置"]
7
+
8
+ ## Technical Field (技术领域)
9
+ [1-2 paragraphs: What technical domain does this invention belong to?]
10
+
11
+ ## Inventors
12
+ - [Name 1 — role/contribution]
13
+ - [Name 2 — role/contribution]
14
+
15
+ ## Background — Known Prior Art (背景技术)
16
+ - **Closest prior art**: [Known patents, papers, or products]
17
+ - **What they do well**: [Strengths of existing approaches]
18
+ - **Their deficiencies**: [Specific technical problems not solved]
19
+ - **Gap**: [What is missing that this invention addresses]
20
+
21
+ ## Technical Problem (要解决的技术问题)
22
+ [State the specific technical problem this invention solves, derived from prior art deficiencies.]
23
+
24
+ ## Proposed Solution (技术方案)
25
+ [Describe the invention's technical solution at a high level. What are the core inventive features?]
26
+
27
+ ## Key Advantages (有益效果)
28
+ [Quantifiable or measurable advantages over prior art.]
29
+ - Advantage 1: [description + evidence if available]
30
+ - Advantage 2: [description + evidence if available]
31
+ - Advantage 3: [description + evidence if available]
32
+
33
+ ## Embodiments (实施例)
34
+ [Describe at least one way to practice the invention. Include specific parameters, components, steps, or configurations.]
35
+
36
+ ### Embodiment 1: [Title]
37
+ [Detailed description]
38
+
39
+ ### Embodiment 2: [Title — optional]
40
+ [Detailed description]
41
+
42
+ ## Figures Available (附图)
43
+ [List available figures. For each figure, briefly describe what it shows.]
44
+
45
+ | Figure | Description | File |
46
+ |--------|-------------|------|
47
+ | Fig. 1 | [e.g., system architecture block diagram] | [path/to/fig1.png] |
48
+ | Fig. 2 | [e.g., method flowchart] | [path/to/fig2.png] |
49
+ | Fig. 3 | [e.g., experimental comparison chart] | [path/to/fig3.png] |
50
+
51
+ ## Target Jurisdiction
52
+ - [ ] CN (CNIPA — 国家知识产权局)
53
+ - [ ] US (USPTO)
54
+ - [ ] EP (EPO)
55
+ - [ ] ALL
56
+
57
+ ## Patent Type
58
+ - [ ] Invention patent (发明专利) — 20 year protection
59
+ - [ ] Utility model (实用新型, CN only) — 10 year protection, apparatus claims only
60
+
61
+ ## Language
62
+ - [ ] Chinese (中文)
63
+ - [ ] English
64
+ - [ ] Auto (detect from jurisdiction)
65
+
66
+ ## Claimable Subject Matter (可权利化的主题)
67
+ [What types of claims do you expect?]
68
+ - [ ] Method/process claims (方法权利要求)
69
+ - [ ] System/apparatus claims (系统/装置权利要求)
70
+ - [ ] Product claims (产品权利要求)
71
+ - [ ] Computer-readable medium claims (计算机可读存储介质, US)
72
+ - [ ] Other: [describe]
73
+
74
+ ## Known Related Patents/Papers
75
+ [List any patents or papers you have already identified as relevant. Include patent numbers or DOIs.]
76
+
77
+ | Reference | Type | Title | Why Relevant |
78
+ |-----------|------|-------|-------------|
79
+ | | Patent / Paper | | |
80
+
81
+ ## Filing Timeline
82
+ - **Preferred filing date**: [date or ASAP]
83
+ - **Priority claim**: [if claiming priority to earlier application]
84
+ - **Publication deadline**: [if any]
85
+
86
+ ## Additional Notes
87
+ [Any other information relevant to the patent application.]
@@ -0,0 +1,7 @@
1
+ # Research Output Manifest
2
+
3
+ > Auto-maintained by ARIS skills. Tracks all generated artifacts across the research lifecycle.
4
+ > See [shared-references/output-manifest.md](../skills/shared-references/output-manifest.md) for the protocol.
5
+
6
+ | Timestamp | Skill | File | Stage | Description |
7
+ |-----------|-------|------|-------|-------------|
@@ -0,0 +1,49 @@
1
+ # Narrative Report: [Your Paper Title]
2
+
3
+ > **Template for Workflow 3 (`/paper-writing`).** Fill in all sections, then run `/paper-writing "NARRATIVE_REPORT.md"`.
4
+
5
+ ## Core Story
6
+ [2-3 paragraphs: problem, approach, key finding, contribution]
7
+
8
+ ## Claims
9
+ 1. **[Main claim]**: [Statement with evidence]
10
+ 2. **[Supporting claim]**: [Statement with evidence]
11
+
12
+ ## Experiments
13
+
14
+ ### Setup
15
+ - **Models**: [What models]
16
+ - **Data**: [Datasets, splits]
17
+ - **Hardware**: [GPUs, time]
18
+ - **Baselines**: [Comparisons]
19
+
20
+ ### Experiment 1: [Name]
21
+ [What you tested and why]
22
+
23
+ | Method | Metric 1 | Metric 2 |
24
+ |--------|----------|----------|
25
+ | Baseline A | X.XX | X.XX |
26
+ | **Ours** | **X.XX** | **X.XX** |
27
+
28
+ **Interpretation**: [What the numbers mean]
29
+
30
+ ### Experiment 2: [Name]
31
+ [Repeat pattern]
32
+
33
+ ## Figures
34
+ 1. **Figure 1**: [Type, what it shows, data source]
35
+ 2. **Table 1**: [Comparison, metrics]
36
+
37
+ ## Known Weaknesses
38
+ - [Limitation 1]
39
+ - [Limitation 2]
40
+
41
+ ## Related Work
42
+ - **[Category 1]**: [Key papers, how you differ]
43
+ - **[Category 2]**: [Key papers, how you differ]
44
+
45
+ ## Proposed Title
46
+ [Title]
47
+
48
+ ## Target Venue
49
+ [Venue] [Year]