diff-grok 1.2.0 → 1.3.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.MD +56 -8
- package/dist/index.d.ts +6 -0
- package/{index.js → dist/index.js} +1 -0
- package/dist/index.js.map +1 -0
- package/dist/src/examples/basic-use.d.ts +10 -0
- package/dist/src/examples/basic-use.js.map +1 -0
- package/dist/src/examples/check-methods.d.ts +1 -0
- package/dist/src/examples/check-methods.js.map +1 -0
- package/dist/src/examples/corr-probs.d.ts +15 -0
- package/{src → dist/src}/examples/corr-probs.js +2 -2
- package/dist/src/examples/corr-probs.js.map +1 -0
- package/dist/src/examples/cyclic-model.d.ts +6 -0
- package/dist/src/examples/cyclic-model.js.map +1 -0
- package/dist/src/examples/e5.d.ts +15 -0
- package/dist/src/examples/e5.js.map +1 -0
- package/dist/src/examples/hires.d.ts +15 -0
- package/dist/src/examples/hires.js.map +1 -0
- package/dist/src/examples/index.d.ts +22 -0
- package/dist/src/examples/index.js.map +1 -0
- package/dist/src/examples/model-updates.d.ts +6 -0
- package/dist/src/examples/model-updates.js.map +1 -0
- package/dist/src/examples/orego.d.ts +15 -0
- package/dist/src/examples/orego.js.map +1 -0
- package/dist/src/examples/pipeline-use.d.ts +6 -0
- package/dist/src/examples/pipeline-use.js.map +1 -0
- package/dist/src/examples/pollution.d.ts +15 -0
- package/dist/src/examples/pollution.js.map +1 -0
- package/{src/examples/print-benchmark.ts → dist/src/examples/print-benchmark.d.ts} +8 -58
- package/dist/src/examples/print-benchmark.js.map +1 -0
- package/dist/src/examples/robertson.d.ts +15 -0
- package/{docs/media → dist/src/examples}/robertson.js +2 -2
- package/dist/src/examples/robertson.js.map +1 -0
- package/dist/src/examples/scripting.d.ts +1 -0
- package/dist/src/examples/scripting.js.map +1 -0
- package/dist/src/examples/vdpol.d.ts +15 -0
- package/dist/src/examples/vdpol.js.map +1 -0
- package/dist/src/latex-export/examples/advanced-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/advanced-to-latex.js +41 -0
- package/dist/src/latex-export/examples/advanced-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/basic-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/basic-to-latex.js +17 -0
- package/dist/src/latex-export/examples/basic-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.d.ts +2 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.js +145 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.js.map +1 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.d.ts +2 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.js +41 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.js.map +1 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.js +58 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/extended-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/extended-to-markdown.js +37 -0
- package/dist/src/latex-export/examples/extended-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.js +32 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.js +58 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.js +53 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.d.ts +2 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.js +50 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.js.map +1 -0
- package/dist/src/latex-export/examples/pk-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/pk-to-markdown.js +35 -0
- package/dist/src/latex-export/examples/pk-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/pollution-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/pollution-to-latex.js +141 -0
- package/dist/src/latex-export/examples/pollution-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.d.ts +2 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.js +25 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.js.map +1 -0
- package/dist/src/latex-export/generator/bracket-manager.d.ts +19 -0
- package/dist/src/latex-export/generator/bracket-manager.js +58 -0
- package/dist/src/latex-export/generator/bracket-manager.js.map +1 -0
- package/dist/src/latex-export/generator/document-builder.d.ts +13 -0
- package/dist/src/latex-export/generator/document-builder.js +433 -0
- package/dist/src/latex-export/generator/document-builder.js.map +1 -0
- package/dist/src/latex-export/generator/latex-generator.d.ts +26 -0
- package/dist/src/latex-export/generator/latex-generator.js +180 -0
- package/dist/src/latex-export/generator/latex-generator.js.map +1 -0
- package/dist/src/latex-export/index.d.ts +8 -0
- package/dist/src/latex-export/index.js +25 -0
- package/dist/src/latex-export/index.js.map +1 -0
- package/dist/src/latex-export/output/md-formatter.d.ts +16 -0
- package/dist/src/latex-export/output/md-formatter.js +27 -0
- package/dist/src/latex-export/output/md-formatter.js.map +1 -0
- package/dist/src/latex-export/output/tex-formatter.d.ts +5 -0
- package/dist/src/latex-export/output/tex-formatter.js +20 -0
- package/dist/src/latex-export/output/tex-formatter.js.map +1 -0
- package/dist/src/latex-export/parser/ast-parser.d.ts +7 -0
- package/dist/src/latex-export/parser/ast-parser.js +153 -0
- package/dist/src/latex-export/parser/ast-parser.js.map +1 -0
- package/dist/src/latex-export/parser/ivp-parser.d.ts +6 -0
- package/dist/src/latex-export/parser/ivp-parser.js +219 -0
- package/dist/src/latex-export/parser/ivp-parser.js.map +1 -0
- package/dist/src/latex-export/parser/line-joiner.d.ts +25 -0
- package/dist/src/latex-export/parser/line-joiner.js +80 -0
- package/dist/src/latex-export/parser/line-joiner.js.map +1 -0
- package/dist/src/latex-export/parser/tokenizer.d.ts +7 -0
- package/dist/src/latex-export/parser/tokenizer.js +143 -0
- package/dist/src/latex-export/parser/tokenizer.js.map +1 -0
- package/dist/src/latex-export/transformer/functions.d.ts +12 -0
- package/dist/src/latex-export/transformer/functions.js +47 -0
- package/dist/src/latex-export/transformer/functions.js.map +1 -0
- package/dist/src/latex-export/transformer/identifier.d.ts +23 -0
- package/dist/src/latex-export/transformer/identifier.js +194 -0
- package/dist/src/latex-export/transformer/identifier.js.map +1 -0
- package/dist/src/latex-export/transformer/operators.d.ts +9 -0
- package/dist/src/latex-export/transformer/operators.js +41 -0
- package/dist/src/latex-export/transformer/operators.js.map +1 -0
- package/dist/src/latex-export/types.d.ts +122 -0
- package/dist/src/latex-export/types.js +10 -0
- package/dist/src/latex-export/types.js.map +1 -0
- package/{src/pipeline/basic-pipeline-creator.ts → dist/src/pipeline/basic-pipeline-creator.d.ts} +11 -28
- package/dist/src/pipeline/basic-pipeline-creator.js.map +1 -0
- package/dist/src/pipeline/constants.d.ts +14 -0
- package/dist/src/pipeline/constants.js.map +1 -0
- package/dist/src/pipeline/index.d.ts +7 -0
- package/dist/src/pipeline/index.js.map +1 -0
- package/dist/src/pipeline/input.d.ts +3 -0
- package/dist/src/pipeline/input.js.map +1 -0
- package/dist/src/pipeline/loops-pipeline-creator.d.ts +124 -0
- package/dist/src/pipeline/loops-pipeline-creator.js.map +1 -0
- package/dist/src/pipeline/output.d.ts +10 -0
- package/{src → dist/src}/pipeline/output.js +1 -1
- package/dist/src/pipeline/output.js.map +1 -0
- package/dist/src/pipeline/pipeline-creator.d.ts +12 -0
- package/{src → dist/src}/pipeline/pipeline-creator.js +2 -0
- package/dist/src/pipeline/pipeline-creator.js.map +1 -0
- package/{src/pipeline/pipeline.ts → dist/src/pipeline/pipeline.d.ts} +10 -97
- package/dist/src/pipeline/pipeline.js.map +1 -0
- package/{src/pipeline/updates-pipeline-creator.ts → dist/src/pipeline/updates-pipeline-creator.d.ts} +15 -131
- package/dist/src/pipeline/updates-pipeline-creator.js.map +1 -0
- package/dist/src/scripting-tools/constants.d.ts +59 -0
- package/dist/src/scripting-tools/constants.js.map +1 -0
- package/dist/src/scripting-tools/index.d.ts +3 -0
- package/dist/src/scripting-tools/index.js.map +1 -0
- package/dist/src/scripting-tools/model-error.d.ts +10 -0
- package/{src → dist/src}/scripting-tools/model-error.js +2 -1
- package/dist/src/scripting-tools/model-error.js.map +1 -0
- package/dist/src/scripting-tools/scripting-tools.d.ts +277 -0
- package/{src → dist/src}/scripting-tools/scripting-tools.js +2 -4
- package/dist/src/scripting-tools/scripting-tools.js.map +1 -0
- package/dist/src/solver-tools/ab4-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ab4-method.js +3 -3
- package/dist/src/solver-tools/ab4-method.js.map +1 -0
- package/dist/src/solver-tools/ab5-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ab5-method.js +3 -3
- package/dist/src/solver-tools/ab5-method.js.map +1 -0
- package/dist/src/solver-tools/callbacks/callback-base.d.ts +8 -0
- package/dist/src/solver-tools/callbacks/callback-base.js.map +1 -0
- package/dist/src/solver-tools/callbacks/callback-tools.d.ts +6 -0
- package/dist/src/solver-tools/callbacks/callback-tools.js.map +1 -0
- package/dist/src/solver-tools/callbacks/iter-checker-callback.d.ts +12 -0
- package/{src → dist/src}/solver-tools/callbacks/iter-checker-callback.js +2 -0
- package/dist/src/solver-tools/callbacks/iter-checker-callback.js.map +1 -0
- package/dist/src/solver-tools/callbacks/time-checker-callback.d.ts +12 -0
- package/{src → dist/src}/solver-tools/callbacks/time-checker-callback.js +2 -2
- package/dist/src/solver-tools/callbacks/time-checker-callback.js.map +1 -0
- package/dist/src/solver-tools/cvode/common.d.ts +395 -0
- package/dist/src/solver-tools/cvode/common.js +483 -0
- package/dist/src/solver-tools/cvode/common.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode.d.ts +23 -0
- package/dist/src/solver-tools/cvode/cvode.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_adams.d.ts +22 -0
- package/dist/src/solver-tools/cvode/cvode_adams.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_bdf.d.ts +37 -0
- package/dist/src/solver-tools/cvode/cvode_bdf.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_class.d.ts +116 -0
- package/{src → dist/src}/solver-tools/cvode/cvode_class.js +9 -4
- package/dist/src/solver-tools/cvode/cvode_class.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_hin.d.ts +24 -0
- package/dist/src/solver-tools/cvode/cvode_hin.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_io.d.ts +98 -0
- package/{src → dist/src}/solver-tools/cvode/cvode_io.js +1 -2
- package/dist/src/solver-tools/cvode/cvode_io.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_ls.d.ts +23 -0
- package/dist/src/solver-tools/cvode/cvode_ls.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_nls.d.ts +25 -0
- package/dist/src/solver-tools/cvode/cvode_nls.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_root.d.ts +64 -0
- package/dist/src/solver-tools/cvode/cvode_root.js.map +1 -0
- package/dist/src/solver-tools/cvode/dense_linalg.d.ts +50 -0
- package/dist/src/solver-tools/cvode/dense_linalg.js.map +1 -0
- package/dist/src/solver-tools/cvode/index.d.ts +24 -0
- package/dist/src/solver-tools/cvode/index.js.map +1 -0
- package/dist/src/solver-tools/cvode-method.d.ts +47 -0
- package/dist/src/solver-tools/cvode-method.js.map +1 -0
- package/dist/src/solver-tools/index.d.ts +16 -0
- package/dist/src/solver-tools/index.js.map +1 -0
- package/dist/src/solver-tools/lin-alg-tools.d.ts +6 -0
- package/dist/src/solver-tools/lin-alg-tools.js.map +1 -0
- package/dist/src/solver-tools/lsoda/blas.d.ts +59 -0
- package/dist/src/solver-tools/lsoda/blas.js.map +1 -0
- package/{src/solver-tools/lsoda/index.ts → dist/src/solver-tools/lsoda/cfode.d.ts} +7 -6
- package/dist/src/solver-tools/lsoda/cfode.js.map +1 -0
- package/dist/src/solver-tools/lsoda/common.d.ts +85 -0
- package/dist/src/solver-tools/lsoda/common.js +96 -0
- package/dist/src/solver-tools/lsoda/common.js.map +1 -0
- package/{src/solver-tools/lsoda/corfailure.ts → dist/src/solver-tools/lsoda/corfailure.d.ts} +2 -26
- package/dist/src/solver-tools/lsoda/corfailure.js.map +1 -0
- package/dist/src/solver-tools/lsoda/correction.d.ts +23 -0
- package/dist/src/solver-tools/lsoda/correction.js.map +1 -0
- package/dist/src/solver-tools/lsoda/dense.d.ts +47 -0
- package/{src → dist/src}/solver-tools/lsoda/dense.js +2 -0
- package/dist/src/solver-tools/lsoda/dense.js.map +1 -0
- package/dist/src/solver-tools/lsoda/index.d.ts +16 -0
- package/dist/src/solver-tools/lsoda/index.js.map +1 -0
- package/dist/src/solver-tools/lsoda/intdy.d.ts +19 -0
- package/dist/src/solver-tools/lsoda/intdy.js.map +1 -0
- package/dist/src/solver-tools/lsoda/lsoda.d.ts +66 -0
- package/{src → dist/src}/solver-tools/lsoda/lsoda.js +13 -5
- package/dist/src/solver-tools/lsoda/lsoda.js.map +1 -0
- package/dist/src/solver-tools/lsoda/methodswitch.d.ts +21 -0
- package/dist/src/solver-tools/lsoda/methodswitch.js.map +1 -0
- package/dist/src/solver-tools/lsoda/orderswitch.d.ts +21 -0
- package/dist/src/solver-tools/lsoda/orderswitch.js.map +1 -0
- package/dist/src/solver-tools/lsoda/prja.d.ts +18 -0
- package/dist/src/solver-tools/lsoda/prja.js.map +1 -0
- package/dist/src/solver-tools/lsoda/scaleh.d.ts +16 -0
- package/dist/src/solver-tools/lsoda/scaleh.js.map +1 -0
- package/{src/solver-tools/lsoda/solsy.ts → dist/src/solver-tools/lsoda/solsy.d.ts} +2 -15
- package/dist/src/solver-tools/lsoda/solsy.js.map +1 -0
- package/dist/src/solver-tools/lsoda/stoda.d.ts +19 -0
- package/dist/src/solver-tools/lsoda/stoda.js.map +1 -0
- package/dist/src/solver-tools/lsoda-method.d.ts +46 -0
- package/dist/src/solver-tools/lsoda-method.js.map +1 -0
- package/dist/src/solver-tools/mrt-method.d.ts +47 -0
- package/{src → dist/src}/solver-tools/mrt-method.js +2 -2
- package/dist/src/solver-tools/mrt-method.js.map +1 -0
- package/dist/src/solver-tools/rk3-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rk3-method.js +2 -2
- package/dist/src/solver-tools/rk3-method.js.map +1 -0
- package/dist/src/solver-tools/rk4-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rk4-method.js +2 -2
- package/dist/src/solver-tools/rk4-method.js.map +1 -0
- package/dist/src/solver-tools/rkdp-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rkdp-method.js +2 -2
- package/dist/src/solver-tools/rkdp-method.js.map +1 -0
- package/dist/src/solver-tools/ros34prw-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ros34prw-method.js +2 -2
- package/dist/src/solver-tools/ros34prw-method.js.map +1 -0
- package/dist/src/solver-tools/ros3prw-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ros3prw-method.js +2 -2
- package/dist/src/solver-tools/ros3prw-method.js.map +1 -0
- package/{src/solver-tools/solver-defs.ts → dist/src/solver-tools/solver-defs.d.ts} +45 -85
- package/dist/src/solver-tools/solver-defs.js.map +1 -0
- package/dist/src/worker-tools/index.d.ts +2 -0
- package/dist/src/worker-tools/index.js.map +1 -0
- package/{src/worker-tools/scripting.ts → dist/src/worker-tools/scripting.d.ts} +9 -91
- package/dist/src/worker-tools/scripting.js.map +1 -0
- package/dist/src/worker-tools/solving.d.ts +7 -0
- package/dist/src/worker-tools/solving.js.map +1 -0
- package/package.json +10 -11
- package/.claude/settings.local.json +0 -11
- package/.claude/skills/license-updater/SKILL.md +0 -149
- package/.claude/skills/license-updater/references/compatibility.md +0 -68
- package/.claude/skills/license-updater/references/templates.md +0 -151
- package/.claude/skills/license-updater/scripts/generate_license_files.py +0 -467
- package/.eslintrc.json +0 -45
- package/.github/ISSUE_TEMPLATE/bug_report.md +0 -29
- package/.github/ISSUE_TEMPLATE/feature_request.md +0 -20
- package/.github/PULL_REQUEST_TEMPLATE.md +0 -22
- package/.github/scripts/bump-js-api-version.sh +0 -106
- package/.github/scripts/check-output.sh +0 -20
- package/.github/scripts/iac-cfn-deploy.sh +0 -90
- package/.github/scripts/slack_api_request.sh +0 -65
- package/.github/scripts/test_package.sh +0 -270
- package/.github/workflows/deploy-docs.yml +0 -15
- package/.github/workflows/libraries.yaml +0 -305
- package/.github/workflows/test.yaml +0 -19
- package/CLAUDE.md +0 -104
- package/CONTRIBUTING.md +0 -74
- package/THIRD_PARTY_LICENSES +0 -135
- package/docs/.nojekyll +0 -1
- package/docs/assets/hierarchy.js +0 -1
- package/docs/assets/highlight.css +0 -99
- package/docs/assets/icons.js +0 -18
- package/docs/assets/icons.svg +0 -1
- package/docs/assets/main.js +0 -60
- package/docs/assets/navigation.js +0 -1
- package/docs/assets/search.js +0 -1
- package/docs/assets/style.css +0 -1633
- package/docs/classes/BasicModelPipelineCreator.html +0 -10
- package/docs/classes/Callback.html +0 -7
- package/docs/classes/CyclicModelPipelineCreator.html +0 -10
- package/docs/classes/IterCheckerCallback.html +0 -8
- package/docs/classes/PipelineCreator.html +0 -6
- package/docs/classes/TimeCheckerCallback.html +0 -8
- package/docs/classes/UpdatesModelPipelineCreator.html +0 -10
- package/docs/functions/ab4.html +0 -8
- package/docs/functions/ab5.html +0 -8
- package/docs/functions/applyPipeline.html +0 -9
- package/docs/functions/getCallback.html +0 -3
- package/docs/functions/getIVP.html +0 -6
- package/docs/functions/getInputVector.html +0 -2
- package/docs/functions/getIvp2WebWorker.html +0 -6
- package/docs/functions/getJScode.html +0 -6
- package/docs/functions/getOutputNames.html +0 -4
- package/docs/functions/getPipelineCreator.html +0 -7
- package/docs/functions/lsoda.html +0 -8
- package/docs/functions/mrt.html +0 -11
- package/docs/functions/printE5.html +0 -76
- package/docs/functions/printHires.html +0 -76
- package/docs/functions/printOrego.html +0 -66
- package/docs/functions/printPollution.html +0 -163
- package/docs/functions/printRobertson.html +0 -60
- package/docs/functions/printVdpol.html +0 -66
- package/docs/functions/rk3.html +0 -8
- package/docs/functions/rk4.html +0 -8
- package/docs/functions/rkdp.html +0 -8
- package/docs/functions/ros34prw.html +0 -8
- package/docs/functions/ros3prw.html +0 -8
- package/docs/functions/solveIvp.html +0 -5
- package/docs/hierarchy.html +0 -1
- package/docs/index.html +0 -768
- package/docs/media/CONTRIBUTING.md +0 -74
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# -------------------------
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65
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# 2. Initial conditions
|
|
66
|
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# -------------------------
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67
|
-
y0 = [1.0, 0.0, 0.0]
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68
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t_start = 0.0
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69
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t_end = 1e11
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70
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t_step = 2.5e6
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71
|
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t_span = (t_start, t_end)
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72
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-
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73
|
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# Output points
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74
|
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t_eval = np.arange(t_start, t_end + t_step, t_step)
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75
|
-
|
|
76
|
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# -------------------------
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77
|
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# 3. Solve ODE
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|
78
|
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# -------------------------
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79
|
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sol = solve_ivp(
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80
|
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robertson,
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81
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t_span,
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82
|
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y0,
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83
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method=METHOD,
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84
|
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t_eval=t_eval,
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85
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rtol=1e-7,
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86
|
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atol=1e-7
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87
|
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)
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88
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-
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89
|
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print("Success:", sol.success)
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90
|
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print("Message:", sol.message)
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91
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-
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92
|
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# sol.t → time array, sol.y.T → concentrations (n_points, 3)
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93
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data = np.column_stack((sol.t, sol.y.T))
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94
|
-
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|
95
|
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# Create DataFrame with headers
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96
|
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df = pd.DataFrame(data, columns=['time', 'A', 'B', 'C'])
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97
|
-
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98
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# Save to CSV
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df.to_csv(f'ROBER-using-{METHOD}.csv', index=False)
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```
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*/
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export function printRobertson(): void {
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printSolution(robertson, mrt, SEPARATOR);
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}
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/** Print solution of the HIRES benchmark problem
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* @example
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108
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* ```ts
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109
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* // TypeScript usage example
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110
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* import {printHires} from 'diff-grok';
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111
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*
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112
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* printHires();
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113
|
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* ```
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114
|
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*
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115
|
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* ```python
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116
|
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* # Python reference calculation for comparison
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117
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* import numpy as np
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118
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import pandas as pd
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119
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from scipy.integrate import solve_ivp
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120
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-
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121
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# -------------------------
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# 0. Solver method
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123
|
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# -------------------------
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METHOD = "Radau" # stiff solver suitable for HIRES
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126
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# -------------------------
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# 1. Define HIRES ODE
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# -------------------------
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def hires(t, y):
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y1, y2, y3, y4, y5, y6, y7, y8 = y
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131
|
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dy = np.zeros(8)
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132
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dy[0] = -1.71 * y1 + 0.43 * y2 + 8.32 * y3 + 0.0007
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133
|
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dy[1] = 1.71 * y1 - 8.75 * y2
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134
|
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dy[2] = -10.03 * y3 + 0.43 * y4 + 0.035 * y5
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135
|
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dy[3] = 8.32 * y2 + 1.71 * y3 - 1.12 * y4
|
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136
|
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dy[4] = -1.745 * y5 + 0.43 * y6 + 0.43 * y7
|
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137
|
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dy[5] = -280 * y6 * y8 + 0.69 * y4 + 1.71 * y5 - 0.43 * y6 + 0.69 * y7
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138
|
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dy[6] = 280 * y6 * y8 - 1.81 * y7
|
|
139
|
-
dy[7] = -280 * y6 * y8 + 1.81 * y7
|
|
140
|
-
return dy
|
|
141
|
-
|
|
142
|
-
# -------------------------
|
|
143
|
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# 2. Initial conditions and time
|
|
144
|
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# -------------------------
|
|
145
|
-
y0 = [1, 0, 0, 0, 0, 0, 0, 0.0057]
|
|
146
|
-
|
|
147
|
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t_start = 0.0
|
|
148
|
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t_end = 321.8122
|
|
149
|
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t_step = 0.01
|
|
150
|
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n_points = int(np.ceil((t_end - t_start) / t_step)) + 1
|
|
151
|
-
t_eval = np.linspace(t_start, t_end, n_points)
|
|
152
|
-
|
|
153
|
-
# -------------------------
|
|
154
|
-
# 3. Solve ODE
|
|
155
|
-
# -------------------------
|
|
156
|
-
sol = solve_ivp(
|
|
157
|
-
hires,
|
|
158
|
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t_span,
|
|
159
|
-
y0,
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|
160
|
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method=METHOD,
|
|
161
|
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t_eval=t_eval,
|
|
162
|
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rtol=1e-10,
|
|
163
|
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atol=1e-10
|
|
164
|
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)
|
|
165
|
-
|
|
166
|
-
print("Success:", sol.success)
|
|
167
|
-
print("Message:", sol.message)
|
|
168
|
-
|
|
169
|
-
# -------------------------
|
|
170
|
-
# 4. Save solution to CSV
|
|
171
|
-
# -------------------------
|
|
172
|
-
# Combine time + concentrations
|
|
173
|
-
data = np.column_stack((sol.t, sol.y.T))
|
|
174
|
-
|
|
175
|
-
# Column names
|
|
176
|
-
col_names = ['t'] + ['y1','y2','y3','y4','y5','y6','y7','y8']
|
|
177
|
-
|
|
178
|
-
# Create DataFrame and save
|
|
179
|
-
df = pd.DataFrame(data, columns=col_names)
|
|
180
|
-
filename = f'HIRES-using-{METHOD}.csv'
|
|
181
|
-
df.to_csv(filename, index=False)
|
|
182
|
-
|
|
183
|
-
print(f"Solution saved to '{filename}'")
|
|
184
|
-
|
|
185
|
-
```
|
|
186
|
-
*/
|
|
187
|
-
export function printHires(): void {
|
|
188
|
-
printSolution(hires, ros34prw, SEPARATOR);
|
|
189
|
-
}
|
|
190
|
-
|
|
191
|
-
/** Print solution of the VDPOL benchmark problem
|
|
192
|
-
* @example
|
|
193
|
-
* ```ts
|
|
194
|
-
* // TypeScript usage example
|
|
195
|
-
* import {printVdpol} from 'diff-grok';
|
|
196
|
-
*
|
|
197
|
-
* printVdpol();
|
|
198
|
-
* ```
|
|
199
|
-
*
|
|
200
|
-
* ```python
|
|
201
|
-
* # Python reference calculation for comparison
|
|
202
|
-
* import numpy as np
|
|
203
|
-
import pandas as pd
|
|
204
|
-
from scipy.integrate import solve_ivp
|
|
205
|
-
|
|
206
|
-
# -------------------------
|
|
207
|
-
# 0. Solver method
|
|
208
|
-
# -------------------------
|
|
209
|
-
METHOD = "Radau" # stiff solver recommended for van der Pol with large mu
|
|
210
|
-
|
|
211
|
-
# -------------------------
|
|
212
|
-
# 1. Define van der Pol ODE (stiff)
|
|
213
|
-
# -------------------------
|
|
214
|
-
def vdpol(t, y):
|
|
215
|
-
x1, x2 = y
|
|
216
|
-
dx1 = x2
|
|
217
|
-
dx2 = -x1 + 1000 * (1 - x1**2) * x2 # mu = 1000
|
|
218
|
-
return [dx1, dx2]
|
|
219
|
-
|
|
220
|
-
# -------------------------
|
|
221
|
-
# 2. Initial conditions and time
|
|
222
|
-
# -------------------------
|
|
223
|
-
y0 = [-1, 1]
|
|
224
|
-
t_start = 0.0
|
|
225
|
-
t_end = 2000.0
|
|
226
|
-
t_step = 0.1
|
|
227
|
-
|
|
228
|
-
# Use linspace to avoid "t_eval not in t_span" error
|
|
229
|
-
n_points = int(np.ceil((t_end - t_start) / t_step)) + 1
|
|
230
|
-
t_eval = np.linspace(t_start, t_end, n_points)
|
|
231
|
-
|
|
232
|
-
# -------------------------
|
|
233
|
-
# 3. Solve ODE
|
|
234
|
-
# -------------------------
|
|
235
|
-
sol = solve_ivp(
|
|
236
|
-
vdpol,
|
|
237
|
-
(t_start, t_end),
|
|
238
|
-
y0,
|
|
239
|
-
method=METHOD,
|
|
240
|
-
t_eval=t_eval,
|
|
241
|
-
rtol=1e-12,
|
|
242
|
-
atol=1e-12
|
|
243
|
-
)
|
|
244
|
-
|
|
245
|
-
print("Success:", sol.success)
|
|
246
|
-
print("Message:", sol.message)
|
|
247
|
-
|
|
248
|
-
# -------------------------
|
|
249
|
-
# 4. Save solution to CSV
|
|
250
|
-
# -------------------------
|
|
251
|
-
data = np.column_stack((sol.t, sol.y.T))
|
|
252
|
-
col_names = ['t', 'x1', 'x2']
|
|
253
|
-
|
|
254
|
-
df = pd.DataFrame(data, columns=col_names)
|
|
255
|
-
filename = f"VANDERPOL-using-{METHOD}.csv"
|
|
256
|
-
df.to_csv(filename, index=False)
|
|
257
|
-
|
|
258
|
-
print(f"Solution saved to '{filename}'")
|
|
259
|
-
|
|
260
|
-
```
|
|
261
|
-
*/
|
|
262
|
-
export function printVdpol(): void {
|
|
263
|
-
printSolution(vdpol, ros34prw, SEPARATOR);
|
|
264
|
-
}
|
|
265
|
-
|
|
266
|
-
/** Print solution of the OREGO benchmark problem
|
|
267
|
-
* @example
|
|
268
|
-
* ```ts
|
|
269
|
-
* // TypeScript usage example
|
|
270
|
-
* import {printOrego} from 'diff-grok';
|
|
271
|
-
*
|
|
272
|
-
* printOrego();
|
|
273
|
-
* ```
|
|
274
|
-
*
|
|
275
|
-
* ```python
|
|
276
|
-
* # Python reference calculation for comparison
|
|
277
|
-
* import numpy as np
|
|
278
|
-
import pandas as pd
|
|
279
|
-
from scipy.integrate import solve_ivp
|
|
280
|
-
|
|
281
|
-
# -------------------------
|
|
282
|
-
# 0. Solver method
|
|
283
|
-
# -------------------------
|
|
284
|
-
METHOD = "Radau" # stiff solver recommended
|
|
285
|
-
|
|
286
|
-
# -------------------------
|
|
287
|
-
# 1. Define OREGO ODE
|
|
288
|
-
# -------------------------
|
|
289
|
-
def orego(t, y):
|
|
290
|
-
y1, y2, y3 = y
|
|
291
|
-
dy1 = 77.27 * (y2 - y1 * y2 + y1 - 0.000008375 * y1**2)
|
|
292
|
-
dy2 = ( -y2 - y1 * y2 + y3 ) / 77.27
|
|
293
|
-
dy3 = 0.161 * (y1 - y3)
|
|
294
|
-
return [dy1, dy2, dy3]
|
|
295
|
-
|
|
296
|
-
# -------------------------
|
|
297
|
-
# 2. Initial conditions and time
|
|
298
|
-
# -------------------------
|
|
299
|
-
y0 = [1, 2, 3]
|
|
300
|
-
t_start = 0.0
|
|
301
|
-
t_end = 360.0
|
|
302
|
-
t_step = 0.01
|
|
303
|
-
|
|
304
|
-
# Use linspace to ensure t_eval within t_span
|
|
305
|
-
n_points = int(np.ceil((t_end - t_start) / t_step)) + 1
|
|
306
|
-
t_eval = np.linspace(t_start, t_end, n_points)
|
|
307
|
-
|
|
308
|
-
# -------------------------
|
|
309
|
-
# 3. Solve ODE
|
|
310
|
-
# -------------------------
|
|
311
|
-
sol = solve_ivp(
|
|
312
|
-
orego,
|
|
313
|
-
(t_start, t_end),
|
|
314
|
-
y0,
|
|
315
|
-
method=METHOD,
|
|
316
|
-
t_eval=t_eval,
|
|
317
|
-
rtol=1e-8,
|
|
318
|
-
atol=1e-8
|
|
319
|
-
)
|
|
320
|
-
|
|
321
|
-
print("Success:", sol.success)
|
|
322
|
-
print("Message:", sol.message)
|
|
323
|
-
|
|
324
|
-
# -------------------------
|
|
325
|
-
# 4. Save solution to CSV
|
|
326
|
-
# -------------------------
|
|
327
|
-
data = np.column_stack((sol.t, sol.y.T))
|
|
328
|
-
col_names = ['t', 'y1', 'y2', 'y3']
|
|
329
|
-
|
|
330
|
-
df = pd.DataFrame(data, columns=col_names)
|
|
331
|
-
filename = f"OREGO-using-{METHOD}.csv"
|
|
332
|
-
df.to_csv(filename, index=False)
|
|
333
|
-
|
|
334
|
-
print(f"Solution saved to '{filename}'")
|
|
335
|
-
```
|
|
336
|
-
*/
|
|
337
|
-
export function printOrego(): void {
|
|
338
|
-
printSolution(orego, ros34prw, SEPARATOR);
|
|
339
|
-
}
|
|
340
|
-
|
|
341
|
-
/** Print solution of the E5 benchmark problem
|
|
342
|
-
* @example
|
|
343
|
-
* ```ts
|
|
344
|
-
* // TypeScript usage example
|
|
345
|
-
* import {printE5} from 'diff-grok';
|
|
346
|
-
*
|
|
347
|
-
* printE5();
|
|
348
|
-
* ```
|
|
349
|
-
*
|
|
350
|
-
* ```python
|
|
351
|
-
* # Python reference calculation for comparison
|
|
352
|
-
* import numpy as np
|
|
353
|
-
import pandas as pd
|
|
354
|
-
from scipy.integrate import solve_ivp
|
|
355
|
-
|
|
356
|
-
# -------------------------
|
|
357
|
-
# 0. Solver method
|
|
358
|
-
# -------------------------
|
|
359
|
-
METHOD = "Radau" # stiff solver recommended
|
|
360
|
-
|
|
361
|
-
# -------------------------
|
|
362
|
-
# 1. Define E5 constants
|
|
363
|
-
# -------------------------
|
|
364
|
-
K1 = 7.89e-10
|
|
365
|
-
K2 = 1.13e9
|
|
366
|
-
K3 = 1.1e7
|
|
367
|
-
K4 = 1.13e3
|
|
368
|
-
|
|
369
|
-
# -------------------------
|
|
370
|
-
# 2. Define E5 ODE
|
|
371
|
-
# -------------------------
|
|
372
|
-
def e5(t, y):
|
|
373
|
-
y1, y2, y3, y4 = y
|
|
374
|
-
dy = np.zeros(4)
|
|
375
|
-
dy[0] = -K1 * y1 - K3 * y1 * y3
|
|
376
|
-
dy[1] = K1 * y1 - K2 * y2 * y3
|
|
377
|
-
dy[2] = K1 * y1 - K2 * y2 * y3 - K3 * y1 * y3 + K4 * y4
|
|
378
|
-
dy[3] = K3 * y1 * y3 - K4 * y4
|
|
379
|
-
return dy
|
|
380
|
-
|
|
381
|
-
# -------------------------
|
|
382
|
-
# 3. Initial conditions and time
|
|
383
|
-
# -------------------------
|
|
384
|
-
y0 = [0.00176, 0, 0, 0]
|
|
385
|
-
t_start = 0.0
|
|
386
|
-
t_end = 1e6
|
|
387
|
-
t_step = 2.5e3
|
|
388
|
-
|
|
389
|
-
# Ensure t_eval is within t_span
|
|
390
|
-
n_points = int(np.ceil((t_end - t_start) / t_step)) + 1
|
|
391
|
-
t_eval = np.linspace(t_start, t_end, n_points)
|
|
392
|
-
|
|
393
|
-
# -------------------------
|
|
394
|
-
# 4. Solve ODE
|
|
395
|
-
# -------------------------
|
|
396
|
-
sol = solve_ivp(
|
|
397
|
-
e5,
|
|
398
|
-
(t_start, t_end),
|
|
399
|
-
y0,
|
|
400
|
-
method=METHOD,
|
|
401
|
-
t_eval=t_eval,
|
|
402
|
-
rtol=1e-6,
|
|
403
|
-
atol=1e-6
|
|
404
|
-
)
|
|
405
|
-
|
|
406
|
-
print("Success:", sol.success)
|
|
407
|
-
print("Message:", sol.message)
|
|
408
|
-
|
|
409
|
-
# -------------------------
|
|
410
|
-
# 5. Save solution to CSV
|
|
411
|
-
# -------------------------
|
|
412
|
-
data = np.column_stack((sol.t, sol.y.T))
|
|
413
|
-
col_names = ['t', 'y1', 'y2', 'y3', 'y4']
|
|
414
|
-
|
|
415
|
-
df = pd.DataFrame(data, columns=col_names)
|
|
416
|
-
filename = f"E5-using-{METHOD}.csv"
|
|
417
|
-
df.to_csv(filename, index=False)
|
|
418
|
-
|
|
419
|
-
print(f"Solution saved to '{filename}'")
|
|
420
|
-
*/
|
|
421
|
-
export function printE5(): void {
|
|
422
|
-
printSolution(e5, ros34prw, SEPARATOR);
|
|
423
|
-
}
|
|
424
|
-
|
|
425
|
-
/** Print solution of the POLL benchmark problem
|
|
426
|
-
* @example
|
|
427
|
-
* ```ts
|
|
428
|
-
* // TypeScript usage example
|
|
429
|
-
* import {printPollution} from 'diff-grok';
|
|
430
|
-
*
|
|
431
|
-
* printPollution();
|
|
432
|
-
* ```
|
|
433
|
-
*
|
|
434
|
-
* ```python
|
|
435
|
-
* # Python reference calculation for comparisonimport numpy as np
|
|
436
|
-
import pandas as pd
|
|
437
|
-
from scipy.integrate import solve_ivp
|
|
438
|
-
|
|
439
|
-
# -------------------------
|
|
440
|
-
# 0. Solver method and tolerance
|
|
441
|
-
# -------------------------
|
|
442
|
-
METHOD = "Radau" # stiff solver
|
|
443
|
-
RTOL = 1e-6
|
|
444
|
-
ATOL = 1e-6
|
|
445
|
-
|
|
446
|
-
# -------------------------
|
|
447
|
-
# 1. Reaction constants
|
|
448
|
-
# -------------------------
|
|
449
|
-
k1 = 0.35
|
|
450
|
-
k2 = 26.6
|
|
451
|
-
k3 = 1.23e4
|
|
452
|
-
k4 = 8.6e-4
|
|
453
|
-
k5 = 8.2e-4
|
|
454
|
-
k6 = 1.5e4
|
|
455
|
-
k7 = 1.3e-4
|
|
456
|
-
k8 = 2.4e4
|
|
457
|
-
k9 = 1.65e4
|
|
458
|
-
k10 = 9e3
|
|
459
|
-
k11 = 0.022
|
|
460
|
-
k12 = 1.2e4
|
|
461
|
-
k13 = 1.88
|
|
462
|
-
k14 = 1.63e4
|
|
463
|
-
k15 = 4.8e6
|
|
464
|
-
k16 = 3.5e-4
|
|
465
|
-
k17 = 0.0175
|
|
466
|
-
k18 = 1e8
|
|
467
|
-
k19 = 4.44e11
|
|
468
|
-
k20 = 1240
|
|
469
|
-
k21 = 2.1
|
|
470
|
-
k22 = 5.78
|
|
471
|
-
k23 = 0.0474
|
|
472
|
-
k24 = 1780
|
|
473
|
-
k25 = 3.12
|
|
474
|
-
|
|
475
|
-
# -------------------------
|
|
476
|
-
# 2. Initial conditions
|
|
477
|
-
# -------------------------
|
|
478
|
-
y0 = [
|
|
479
|
-
0, # y1 NO2
|
|
480
|
-
0.2, # y2 NO
|
|
481
|
-
0, # y3 O3P
|
|
482
|
-
0.04, # y4 O3
|
|
483
|
-
0, # y5 HO2
|
|
484
|
-
0, # y6 OH
|
|
485
|
-
0.1, # y7 HCHO
|
|
486
|
-
0.3, # y8 CO
|
|
487
|
-
0.01, # y9 ALD
|
|
488
|
-
0, # y10 MEO2
|
|
489
|
-
0, # y11 C2O3
|
|
490
|
-
0, # y12 CO2
|
|
491
|
-
0, # y13 PAN
|
|
492
|
-
0, # y14 CH3O
|
|
493
|
-
0, # y15 HNO3
|
|
494
|
-
0, # y16 O1D
|
|
495
|
-
0.007, # y17 SO2
|
|
496
|
-
0, # y18 SO4
|
|
497
|
-
0, # y19 NO3
|
|
498
|
-
0 # y20 N2O5
|
|
499
|
-
]
|
|
500
|
-
|
|
501
|
-
# -------------------------
|
|
502
|
-
# 3. Define POLL ODE system
|
|
503
|
-
# -------------------------
|
|
504
|
-
def poll(t, y):
|
|
505
|
-
y = np.array(y)
|
|
506
|
-
r1 = k1*y[0]
|
|
507
|
-
r2 = k2*y[1]*y[3]
|
|
508
|
-
r3 = k3*y[4]*y[1]
|
|
509
|
-
r4 = k4*y[6]
|
|
510
|
-
r5 = k5*y[6]
|
|
511
|
-
r6 = k6*y[6]*y[5]
|
|
512
|
-
r7 = k7*y[8]
|
|
513
|
-
r8 = k8*y[8]*y[5]
|
|
514
|
-
r9 = k9*y[10]*y[1]
|
|
515
|
-
r10 = k10*y[10]*y[0]
|
|
516
|
-
r11 = k11*y[12]
|
|
517
|
-
r12 = k12*y[9]*y[1]
|
|
518
|
-
r13 = k13*y[13]
|
|
519
|
-
r14 = k14*y[0]*y[5]
|
|
520
|
-
r15 = k15*y[2]
|
|
521
|
-
r16 = k16*y[3]
|
|
522
|
-
r17 = k17*y[3]
|
|
523
|
-
r18 = k18*y[15]
|
|
524
|
-
r19 = k19*y[15]
|
|
525
|
-
r20 = k20*y[16]*y[5]
|
|
526
|
-
r21 = k21*y[18]
|
|
527
|
-
r22 = k22*y[18]
|
|
528
|
-
r23 = k23*y[0]*y[3]
|
|
529
|
-
r24 = k24*y[18]*y[0]
|
|
530
|
-
r25 = k25*y[19]
|
|
531
|
-
|
|
532
|
-
dy = np.zeros(20)
|
|
533
|
-
dy[0] = -(r1 + r10 + r14 + r23 + r24) + (r2 + r3 + r9 + r11 + r12 + r22 + r25)
|
|
534
|
-
dy[1] = -r2 - r3 - r9 - r12 + r1 + r21
|
|
535
|
-
dy[2] = -r15 + r1 + r17 + r19 + r22
|
|
536
|
-
dy[3] = -r2 - r16 - r17 - r23 + r15
|
|
537
|
-
dy[4] = -r3 + 2*r4 + r6 + r7 + r13 + r20
|
|
538
|
-
dy[5] = -r6 - r8 - r14 - r20 + r3 + 2*r18
|
|
539
|
-
dy[6] = -r4 - r5 - r6 + r13
|
|
540
|
-
dy[7] = r4 + r5 + r6 + r7
|
|
541
|
-
dy[8] = -r7 - r8
|
|
542
|
-
dy[9] = -r12 + r7 + r9
|
|
543
|
-
dy[10] = -r9 - r10 + r8 + r11
|
|
544
|
-
dy[11] = r9
|
|
545
|
-
dy[12] = -r11 + r10
|
|
546
|
-
dy[13] = -r13 + r12
|
|
547
|
-
dy[14] = r14
|
|
548
|
-
dy[15] = -r18 - r19 + r16
|
|
549
|
-
dy[16] = -r20
|
|
550
|
-
dy[17] = r20
|
|
551
|
-
dy[18] = -r21 - r22 - r24 + r23 + r25
|
|
552
|
-
dy[19] = -r25 + r24
|
|
553
|
-
|
|
554
|
-
return dy
|
|
555
|
-
|
|
556
|
-
# -------------------------
|
|
557
|
-
# 4. Time array
|
|
558
|
-
# -------------------------
|
|
559
|
-
t_start = 0
|
|
560
|
-
t_end = 60 # final time
|
|
561
|
-
t_step = 0.002
|
|
562
|
-
n_points = int(np.ceil((t_end - t_start)/t_step)) + 1
|
|
563
|
-
t_eval = np.linspace(t_start, t_end, n_points)
|
|
564
|
-
|
|
565
|
-
# -------------------------
|
|
566
|
-
# 5. Solve ODE
|
|
567
|
-
# -------------------------
|
|
568
|
-
sol = solve_ivp(
|
|
569
|
-
poll,
|
|
570
|
-
(t_start, t_end),
|
|
571
|
-
y0,
|
|
572
|
-
method=METHOD,
|
|
573
|
-
t_eval=t_eval,
|
|
574
|
-
rtol=RTOL,
|
|
575
|
-
atol=ATOL
|
|
576
|
-
)
|
|
577
|
-
|
|
578
|
-
print("Success:", sol.success)
|
|
579
|
-
print("Message:", sol.message)
|
|
580
|
-
|
|
581
|
-
# -------------------------
|
|
582
|
-
# 6. Save solution to CSV
|
|
583
|
-
# -------------------------
|
|
584
|
-
col_names = ['t'] + [f'y{i+1}' for i in range(20)]
|
|
585
|
-
data = np.column_stack((sol.t, sol.y.T))
|
|
586
|
-
df = pd.DataFrame(data, columns=col_names)
|
|
587
|
-
filename = f"POLL-using-{METHOD}.csv"
|
|
588
|
-
df.to_csv(filename, index=False)
|
|
589
|
-
|
|
590
|
-
print(f"Solution saved to '{filename}'")
|
|
591
|
-
*/
|
|
592
|
-
export function printPollution(): void {
|
|
593
|
-
printSolution(pollution, ros34prw, SEPARATOR);
|
|
594
|
-
}
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
{"version":3,"file":"robertson.js","sourceRoot":"","sources":["robertson.ts"],"names":[],"mappings":"AAAA,gHAAgH;AAChH,MAAM,CAAC,MAAM,SAAS,GAAG;IACvB,IAAI,EAAE,WAAW;IACjB,GAAG,EAAE,EAAC,IAAI,EAAE,GAAG,EAAE,KAAK,EAAE,CAAC,EAAE,MAAM,EAAE,KAAK,EAAE,IAAI,EAAE,KAAK,EAAC;IACtD,OAAO,EAAE,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC;IAClB,IAAI,EAAE,CAAC,CAAS,EAAE,CAAe,EAAE,MAAoB,EAAE,EAAE;QACzD,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QAC7C,MAAM,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,SAAA,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAA,CAAC;QAC5D,MAAM,CAAC,CAAC,CAAC,GAAG,GAAG,GAAG,SAAA,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAA,CAAC;IAC5B,CAAC;IACD,SAAS,EAAE,IAAI;IACf,gBAAgB,EAAE,CAAC,GAAG,EAAE,GAAG,EAAE,GAAG,CAAC;CAClC,CAAC;AAEF,MAAM,CAAC,MAAM,uBAAuB,GAAG,IAAI,YAAY,CAAC;IACtD,qBAAqB;IACrB,sBAAsB;IACtB,kBAAkB;CACnB,CAAC,CAAC"}
|
package/docs/media/robertson.ts
DELETED
|
@@ -1,19 +0,0 @@
|
|
|
1
|
-
/** Robertson chemical reaction, updated version (see https://archimede.uniba.it/~testset/problems/rober.php) */
|
|
2
|
-
export const robertson = {
|
|
3
|
-
name: 'Robertson',
|
|
4
|
-
arg: {name: 't', start: 0, finish: 10e11, step: 2.5e6},
|
|
5
|
-
initial: [1, 0, 0],
|
|
6
|
-
func: (t: number, y: Float64Array, output: Float64Array) => {
|
|
7
|
-
output[0] = -0.04 * y[0] + 1e4 * y[1] * y[2];
|
|
8
|
-
output[1] = 0.04 * y[0] - 1e4 * y[1] * y[2] - 3e7 * y[1]**2;
|
|
9
|
-
output[2] = 3e7 * y[1]**2;
|
|
10
|
-
},
|
|
11
|
-
tolerance: 1e-7,
|
|
12
|
-
solutionColNames: ['A', 'B', 'C'],
|
|
13
|
-
};
|
|
14
|
-
|
|
15
|
-
export const robertsonReferencePoint = new Float64Array([
|
|
16
|
-
0.2083340149701255E-7,
|
|
17
|
-
0.8333360770334713E-13,
|
|
18
|
-
0.9999999791665050,
|
|
19
|
-
]);
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
{"version":3,"file":"scripting.js","sourceRoot":"","sources":["scripting.ts"],"names":[],"mappings":"AAAA,OAAO,EAAC,MAAM,EAAE,SAAS,EAAC,MAAM,aAAa,CAAC;AAE9C;;;;;;;GAOG;AAEH,mDAAmD;AACnD,MAAM,KAAK,GAAG;;;;;;;;;;;;cAYA,CAAC;AAEf,sBAAsB;AACtB,MAAM,GAAG,GAAG,MAAM,CAAC,KAAK,CAAC,CAAC;AAE1B,OAAO,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;AAEjB,8CAA8C;AAC9C,MAAM,KAAK,GAAG,SAAS,CAAC,GAAG,CAAC,CAAC;AAE7B,OAAO,CAAC,GAAG,CAAC,KAAK,CAAC,CAAC"}
|
package/docs/media/scripting.ts
DELETED
|
@@ -1,35 +0,0 @@
|
|
|
1
|
-
import {getIVP, getJScode} from '../../index';
|
|
2
|
-
|
|
3
|
-
/** Example. Solve the following initial value problem
|
|
4
|
-
dx / dt = x + y - cos(t)
|
|
5
|
-
dy / dt = x - y + sin(t)
|
|
6
|
-
x(0) = 1
|
|
7
|
-
y(0) = 0
|
|
8
|
-
|
|
9
|
-
on [0, 1] with the step 0.01.
|
|
10
|
-
*/
|
|
11
|
-
|
|
12
|
-
/** Diff Grok model specifying the given problem */
|
|
13
|
-
const model = `#name: Example
|
|
14
|
-
#equations:
|
|
15
|
-
dx/dt = x + y - cos(t)
|
|
16
|
-
dy/dt = x - y + sin(t)
|
|
17
|
-
|
|
18
|
-
#inits:
|
|
19
|
-
x = 1
|
|
20
|
-
y = 0
|
|
21
|
-
|
|
22
|
-
#argument: t
|
|
23
|
-
start = 0
|
|
24
|
-
finish = 1
|
|
25
|
-
step = 0.01`;
|
|
26
|
-
|
|
27
|
-
// Get parsed formulas
|
|
28
|
-
const ivp = getIVP(model);
|
|
29
|
-
|
|
30
|
-
console.log(ivp);
|
|
31
|
-
|
|
32
|
-
// Get lines of JS-code specifying ODEs object
|
|
33
|
-
const lines = getJScode(ivp);
|
|
34
|
-
|
|
35
|
-
console.log(lines);
|
package/docs/media/vdpol.js.map
DELETED
|
@@ -1 +0,0 @@
|
|
|
1
|
-
{"version":3,"file":"vdpol.js","sourceRoot":"","sources":["vdpol.ts"],"names":[],"mappings":"AAAA,0FAA0F;AAC1F,MAAM,CAAC,MAAM,KAAK,GAAG;IACnB,IAAI,EAAE,aAAa;IACnB,GAAG,EAAE,EAAC,IAAI,EAAE,GAAG,EAAE,KAAK,EAAE,CAAC,EAAE,MAAM,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,EAAC;IACnD,OAAO,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;IAChB,IAAI,EAAE,CAAC,CAAS,EAAE,CAAe,EAAE,MAAoB,EAAE,EAAE;QACzD,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;QACjB,MAAM,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,IAAI,GAAG,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACtD,CAAC;IACD,SAAS,EAAE,KAAK;IAChB,gBAAgB,EAAE,CAAC,IAAI,EAAE,IAAI,CAAC;CAC/B,CAAC;AAEF,MAAM,CAAC,MAAM,mBAAmB,GAAG,IAAI,YAAY,CAAC;IAClD,iBAAiB;IACjB,CAAC,qBAAqB;CACvB,CAAC,CAAC"}
|
package/docs/media/vdpol.ts
DELETED
|
@@ -1,17 +0,0 @@
|
|
|
1
|
-
/** Van der Pol oscillator (see https://archimede.uniba.it/~testset/problems/vdpol.php) */
|
|
2
|
-
export const vdpol = {
|
|
3
|
-
name: 'van der Pol',
|
|
4
|
-
arg: {name: 't', start: 0, finish: 2000, step: 0.1},
|
|
5
|
-
initial: [-1, 1],
|
|
6
|
-
func: (t: number, y: Float64Array, output: Float64Array) => {
|
|
7
|
-
output[0] = y[1];
|
|
8
|
-
output[1] = -y[0] + 1000 * (1 - y[0] * y[0]) * y[1];
|
|
9
|
-
},
|
|
10
|
-
tolerance: 1e-12,
|
|
11
|
-
solutionColNames: ['x1', 'x2'],
|
|
12
|
-
};
|
|
13
|
-
|
|
14
|
-
export const vdpolReferencePoint = new Float64Array([
|
|
15
|
-
1.706167732170469,
|
|
16
|
-
-0.8928097010248125E-3,
|
|
17
|
-
]);
|