diff-grok 1.2.0 → 1.3.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.MD +39 -8
- package/dist/index.d.ts +6 -0
- package/{index.js → dist/index.js} +1 -0
- package/dist/index.js.map +1 -0
- package/dist/src/examples/basic-use.d.ts +10 -0
- package/dist/src/examples/basic-use.js.map +1 -0
- package/dist/src/examples/check-methods.d.ts +1 -0
- package/dist/src/examples/check-methods.js.map +1 -0
- package/dist/src/examples/corr-probs.d.ts +15 -0
- package/{src → dist/src}/examples/corr-probs.js +2 -2
- package/dist/src/examples/corr-probs.js.map +1 -0
- package/dist/src/examples/cyclic-model.d.ts +6 -0
- package/dist/src/examples/cyclic-model.js.map +1 -0
- package/dist/src/examples/e5.d.ts +15 -0
- package/dist/src/examples/e5.js.map +1 -0
- package/dist/src/examples/hires.d.ts +15 -0
- package/dist/src/examples/hires.js.map +1 -0
- package/dist/src/examples/index.d.ts +22 -0
- package/dist/src/examples/index.js.map +1 -0
- package/dist/src/examples/model-updates.d.ts +6 -0
- package/dist/src/examples/model-updates.js.map +1 -0
- package/dist/src/examples/orego.d.ts +15 -0
- package/dist/src/examples/orego.js.map +1 -0
- package/dist/src/examples/pipeline-use.d.ts +6 -0
- package/dist/src/examples/pipeline-use.js.map +1 -0
- package/dist/src/examples/pollution.d.ts +15 -0
- package/dist/src/examples/pollution.js.map +1 -0
- package/{src/examples/print-benchmark.ts → dist/src/examples/print-benchmark.d.ts} +8 -58
- package/dist/src/examples/print-benchmark.js.map +1 -0
- package/dist/src/examples/robertson.d.ts +15 -0
- package/{docs/media → dist/src/examples}/robertson.js +2 -2
- package/dist/src/examples/robertson.js.map +1 -0
- package/dist/src/examples/scripting.d.ts +1 -0
- package/dist/src/examples/scripting.js.map +1 -0
- package/dist/src/examples/vdpol.d.ts +15 -0
- package/dist/src/examples/vdpol.js.map +1 -0
- package/dist/src/latex-export/examples/advanced-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/advanced-to-latex.js +41 -0
- package/dist/src/latex-export/examples/advanced-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/basic-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/basic-to-latex.js +17 -0
- package/dist/src/latex-export/examples/basic-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.d.ts +2 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.js +145 -0
- package/dist/src/latex-export/examples/bioreactor-to-latex-selective.js.map +1 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.d.ts +2 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.js +41 -0
- package/dist/src/latex-export/examples/chem-react-to-latex-no-cdot.js.map +1 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.js +58 -0
- package/dist/src/latex-export/examples/energy-n-control-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/extended-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/extended-to-markdown.js +37 -0
- package/dist/src/latex-export/examples/extended-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.js +32 -0
- package/dist/src/latex-export/examples/fermentation-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.js +58 -0
- package/dist/src/latex-export/examples/ga-production-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.js +53 -0
- package/dist/src/latex-export/examples/nimotuzumab-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.d.ts +2 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.js +50 -0
- package/dist/src/latex-export/examples/pk-pd-to-markdown-minimal.js.map +1 -0
- package/dist/src/latex-export/examples/pk-to-markdown.d.ts +2 -0
- package/dist/src/latex-export/examples/pk-to-markdown.js +35 -0
- package/dist/src/latex-export/examples/pk-to-markdown.js.map +1 -0
- package/dist/src/latex-export/examples/pollution-to-latex.d.ts +2 -0
- package/dist/src/latex-export/examples/pollution-to-latex.js +141 -0
- package/dist/src/latex-export/examples/pollution-to-latex.js.map +1 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.d.ts +2 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.js +25 -0
- package/dist/src/latex-export/examples/robertson-to-latex-no-meta.js.map +1 -0
- package/dist/src/latex-export/generator/bracket-manager.d.ts +19 -0
- package/dist/src/latex-export/generator/bracket-manager.js +58 -0
- package/dist/src/latex-export/generator/bracket-manager.js.map +1 -0
- package/dist/src/latex-export/generator/document-builder.d.ts +13 -0
- package/dist/src/latex-export/generator/document-builder.js +433 -0
- package/dist/src/latex-export/generator/document-builder.js.map +1 -0
- package/dist/src/latex-export/generator/latex-generator.d.ts +23 -0
- package/dist/src/latex-export/generator/latex-generator.js +176 -0
- package/dist/src/latex-export/generator/latex-generator.js.map +1 -0
- package/dist/src/latex-export/index.d.ts +8 -0
- package/dist/src/latex-export/index.js +25 -0
- package/dist/src/latex-export/index.js.map +1 -0
- package/dist/src/latex-export/output/md-formatter.d.ts +16 -0
- package/dist/src/latex-export/output/md-formatter.js +27 -0
- package/dist/src/latex-export/output/md-formatter.js.map +1 -0
- package/dist/src/latex-export/output/tex-formatter.d.ts +5 -0
- package/dist/src/latex-export/output/tex-formatter.js +20 -0
- package/dist/src/latex-export/output/tex-formatter.js.map +1 -0
- package/dist/src/latex-export/parser/ast-parser.d.ts +7 -0
- package/dist/src/latex-export/parser/ast-parser.js +153 -0
- package/dist/src/latex-export/parser/ast-parser.js.map +1 -0
- package/dist/src/latex-export/parser/ivp-parser.d.ts +6 -0
- package/dist/src/latex-export/parser/ivp-parser.js +219 -0
- package/dist/src/latex-export/parser/ivp-parser.js.map +1 -0
- package/dist/src/latex-export/parser/line-joiner.d.ts +25 -0
- package/dist/src/latex-export/parser/line-joiner.js +80 -0
- package/dist/src/latex-export/parser/line-joiner.js.map +1 -0
- package/dist/src/latex-export/parser/tokenizer.d.ts +7 -0
- package/dist/src/latex-export/parser/tokenizer.js +143 -0
- package/dist/src/latex-export/parser/tokenizer.js.map +1 -0
- package/dist/src/latex-export/transformer/functions.d.ts +12 -0
- package/dist/src/latex-export/transformer/functions.js +47 -0
- package/dist/src/latex-export/transformer/functions.js.map +1 -0
- package/dist/src/latex-export/transformer/identifier.d.ts +23 -0
- package/dist/src/latex-export/transformer/identifier.js +194 -0
- package/dist/src/latex-export/transformer/identifier.js.map +1 -0
- package/dist/src/latex-export/transformer/operators.d.ts +9 -0
- package/dist/src/latex-export/transformer/operators.js +41 -0
- package/dist/src/latex-export/transformer/operators.js.map +1 -0
- package/dist/src/latex-export/types.d.ts +122 -0
- package/dist/src/latex-export/types.js +10 -0
- package/dist/src/latex-export/types.js.map +1 -0
- package/{src/pipeline/basic-pipeline-creator.ts → dist/src/pipeline/basic-pipeline-creator.d.ts} +11 -28
- package/dist/src/pipeline/basic-pipeline-creator.js.map +1 -0
- package/dist/src/pipeline/constants.d.ts +14 -0
- package/dist/src/pipeline/constants.js.map +1 -0
- package/dist/src/pipeline/index.d.ts +7 -0
- package/dist/src/pipeline/index.js.map +1 -0
- package/dist/src/pipeline/input.d.ts +3 -0
- package/dist/src/pipeline/input.js.map +1 -0
- package/dist/src/pipeline/loops-pipeline-creator.d.ts +124 -0
- package/dist/src/pipeline/loops-pipeline-creator.js.map +1 -0
- package/dist/src/pipeline/output.d.ts +10 -0
- package/{src → dist/src}/pipeline/output.js +1 -1
- package/dist/src/pipeline/output.js.map +1 -0
- package/dist/src/pipeline/pipeline-creator.d.ts +12 -0
- package/{src → dist/src}/pipeline/pipeline-creator.js +2 -0
- package/dist/src/pipeline/pipeline-creator.js.map +1 -0
- package/{src/pipeline/pipeline.ts → dist/src/pipeline/pipeline.d.ts} +10 -97
- package/dist/src/pipeline/pipeline.js.map +1 -0
- package/{src/pipeline/updates-pipeline-creator.ts → dist/src/pipeline/updates-pipeline-creator.d.ts} +15 -131
- package/dist/src/pipeline/updates-pipeline-creator.js.map +1 -0
- package/dist/src/scripting-tools/constants.d.ts +59 -0
- package/dist/src/scripting-tools/constants.js.map +1 -0
- package/dist/src/scripting-tools/index.d.ts +3 -0
- package/dist/src/scripting-tools/index.js.map +1 -0
- package/dist/src/scripting-tools/model-error.d.ts +10 -0
- package/{src → dist/src}/scripting-tools/model-error.js +2 -1
- package/dist/src/scripting-tools/model-error.js.map +1 -0
- package/dist/src/scripting-tools/scripting-tools.d.ts +277 -0
- package/{src → dist/src}/scripting-tools/scripting-tools.js +2 -4
- package/dist/src/scripting-tools/scripting-tools.js.map +1 -0
- package/dist/src/solver-tools/ab4-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ab4-method.js +3 -3
- package/dist/src/solver-tools/ab4-method.js.map +1 -0
- package/dist/src/solver-tools/ab5-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ab5-method.js +3 -3
- package/dist/src/solver-tools/ab5-method.js.map +1 -0
- package/dist/src/solver-tools/callbacks/callback-base.d.ts +8 -0
- package/dist/src/solver-tools/callbacks/callback-base.js.map +1 -0
- package/dist/src/solver-tools/callbacks/callback-tools.d.ts +6 -0
- package/dist/src/solver-tools/callbacks/callback-tools.js.map +1 -0
- package/dist/src/solver-tools/callbacks/iter-checker-callback.d.ts +12 -0
- package/{src → dist/src}/solver-tools/callbacks/iter-checker-callback.js +2 -0
- package/dist/src/solver-tools/callbacks/iter-checker-callback.js.map +1 -0
- package/dist/src/solver-tools/callbacks/time-checker-callback.d.ts +12 -0
- package/{src → dist/src}/solver-tools/callbacks/time-checker-callback.js +2 -2
- package/dist/src/solver-tools/callbacks/time-checker-callback.js.map +1 -0
- package/dist/src/solver-tools/cvode/common.d.ts +395 -0
- package/dist/src/solver-tools/cvode/common.js +483 -0
- package/dist/src/solver-tools/cvode/common.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode.d.ts +23 -0
- package/dist/src/solver-tools/cvode/cvode.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_adams.d.ts +22 -0
- package/dist/src/solver-tools/cvode/cvode_adams.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_bdf.d.ts +37 -0
- package/dist/src/solver-tools/cvode/cvode_bdf.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_class.d.ts +116 -0
- package/{src → dist/src}/solver-tools/cvode/cvode_class.js +9 -4
- package/dist/src/solver-tools/cvode/cvode_class.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_hin.d.ts +24 -0
- package/dist/src/solver-tools/cvode/cvode_hin.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_io.d.ts +98 -0
- package/{src → dist/src}/solver-tools/cvode/cvode_io.js +1 -2
- package/dist/src/solver-tools/cvode/cvode_io.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_ls.d.ts +23 -0
- package/dist/src/solver-tools/cvode/cvode_ls.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_nls.d.ts +25 -0
- package/dist/src/solver-tools/cvode/cvode_nls.js.map +1 -0
- package/dist/src/solver-tools/cvode/cvode_root.d.ts +64 -0
- package/dist/src/solver-tools/cvode/cvode_root.js.map +1 -0
- package/dist/src/solver-tools/cvode/dense_linalg.d.ts +50 -0
- package/dist/src/solver-tools/cvode/dense_linalg.js.map +1 -0
- package/dist/src/solver-tools/cvode/index.d.ts +24 -0
- package/dist/src/solver-tools/cvode/index.js.map +1 -0
- package/dist/src/solver-tools/cvode-method.d.ts +47 -0
- package/dist/src/solver-tools/cvode-method.js.map +1 -0
- package/dist/src/solver-tools/index.d.ts +16 -0
- package/dist/src/solver-tools/index.js.map +1 -0
- package/dist/src/solver-tools/lin-alg-tools.d.ts +6 -0
- package/dist/src/solver-tools/lin-alg-tools.js.map +1 -0
- package/dist/src/solver-tools/lsoda/blas.d.ts +59 -0
- package/dist/src/solver-tools/lsoda/blas.js.map +1 -0
- package/{src/solver-tools/lsoda/index.ts → dist/src/solver-tools/lsoda/cfode.d.ts} +7 -6
- package/dist/src/solver-tools/lsoda/cfode.js.map +1 -0
- package/dist/src/solver-tools/lsoda/common.d.ts +85 -0
- package/dist/src/solver-tools/lsoda/common.js +96 -0
- package/dist/src/solver-tools/lsoda/common.js.map +1 -0
- package/{src/solver-tools/lsoda/corfailure.ts → dist/src/solver-tools/lsoda/corfailure.d.ts} +2 -26
- package/dist/src/solver-tools/lsoda/corfailure.js.map +1 -0
- package/dist/src/solver-tools/lsoda/correction.d.ts +23 -0
- package/dist/src/solver-tools/lsoda/correction.js.map +1 -0
- package/dist/src/solver-tools/lsoda/dense.d.ts +47 -0
- package/{src → dist/src}/solver-tools/lsoda/dense.js +2 -0
- package/dist/src/solver-tools/lsoda/dense.js.map +1 -0
- package/dist/src/solver-tools/lsoda/index.d.ts +16 -0
- package/dist/src/solver-tools/lsoda/index.js.map +1 -0
- package/dist/src/solver-tools/lsoda/intdy.d.ts +19 -0
- package/dist/src/solver-tools/lsoda/intdy.js.map +1 -0
- package/dist/src/solver-tools/lsoda/lsoda.d.ts +66 -0
- package/{src → dist/src}/solver-tools/lsoda/lsoda.js +13 -5
- package/dist/src/solver-tools/lsoda/lsoda.js.map +1 -0
- package/dist/src/solver-tools/lsoda/methodswitch.d.ts +21 -0
- package/dist/src/solver-tools/lsoda/methodswitch.js.map +1 -0
- package/dist/src/solver-tools/lsoda/orderswitch.d.ts +21 -0
- package/dist/src/solver-tools/lsoda/orderswitch.js.map +1 -0
- package/dist/src/solver-tools/lsoda/prja.d.ts +18 -0
- package/dist/src/solver-tools/lsoda/prja.js.map +1 -0
- package/dist/src/solver-tools/lsoda/scaleh.d.ts +16 -0
- package/dist/src/solver-tools/lsoda/scaleh.js.map +1 -0
- package/{src/solver-tools/lsoda/solsy.ts → dist/src/solver-tools/lsoda/solsy.d.ts} +2 -15
- package/dist/src/solver-tools/lsoda/solsy.js.map +1 -0
- package/dist/src/solver-tools/lsoda/stoda.d.ts +19 -0
- package/dist/src/solver-tools/lsoda/stoda.js.map +1 -0
- package/dist/src/solver-tools/lsoda-method.d.ts +46 -0
- package/dist/src/solver-tools/lsoda-method.js.map +1 -0
- package/dist/src/solver-tools/mrt-method.d.ts +47 -0
- package/{src → dist/src}/solver-tools/mrt-method.js +2 -2
- package/dist/src/solver-tools/mrt-method.js.map +1 -0
- package/dist/src/solver-tools/rk3-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rk3-method.js +2 -2
- package/dist/src/solver-tools/rk3-method.js.map +1 -0
- package/dist/src/solver-tools/rk4-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rk4-method.js +2 -2
- package/dist/src/solver-tools/rk4-method.js.map +1 -0
- package/dist/src/solver-tools/rkdp-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/rkdp-method.js +2 -2
- package/dist/src/solver-tools/rkdp-method.js.map +1 -0
- package/dist/src/solver-tools/ros34prw-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ros34prw-method.js +2 -2
- package/dist/src/solver-tools/ros34prw-method.js.map +1 -0
- package/dist/src/solver-tools/ros3prw-method.d.ts +46 -0
- package/{src → dist/src}/solver-tools/ros3prw-method.js +2 -2
- package/dist/src/solver-tools/ros3prw-method.js.map +1 -0
- package/{src/solver-tools/solver-defs.ts → dist/src/solver-tools/solver-defs.d.ts} +45 -85
- package/dist/src/solver-tools/solver-defs.js.map +1 -0
- package/dist/src/worker-tools/index.d.ts +2 -0
- package/dist/src/worker-tools/index.js.map +1 -0
- package/{src/worker-tools/scripting.ts → dist/src/worker-tools/scripting.d.ts} +9 -91
- package/dist/src/worker-tools/scripting.js.map +1 -0
- package/dist/src/worker-tools/solving.d.ts +7 -0
- package/dist/src/worker-tools/solving.js.map +1 -0
- package/package.json +10 -11
- package/.claude/settings.local.json +0 -11
- package/.claude/skills/license-updater/SKILL.md +0 -149
- package/.claude/skills/license-updater/references/compatibility.md +0 -68
- package/.claude/skills/license-updater/references/templates.md +0 -151
- package/.claude/skills/license-updater/scripts/generate_license_files.py +0 -467
- package/.eslintrc.json +0 -45
- package/.github/ISSUE_TEMPLATE/bug_report.md +0 -29
- package/.github/ISSUE_TEMPLATE/feature_request.md +0 -20
- package/.github/PULL_REQUEST_TEMPLATE.md +0 -22
- package/.github/scripts/bump-js-api-version.sh +0 -106
- package/.github/scripts/check-output.sh +0 -20
- package/.github/scripts/iac-cfn-deploy.sh +0 -90
- package/.github/scripts/slack_api_request.sh +0 -65
- package/.github/scripts/test_package.sh +0 -270
- package/.github/workflows/deploy-docs.yml +0 -15
- package/.github/workflows/libraries.yaml +0 -305
- package/.github/workflows/test.yaml +0 -19
- package/CLAUDE.md +0 -104
- package/CONTRIBUTING.md +0 -74
- package/THIRD_PARTY_LICENSES +0 -135
- package/docs/.nojekyll +0 -1
- package/docs/assets/hierarchy.js +0 -1
- package/docs/assets/highlight.css +0 -99
- package/docs/assets/icons.js +0 -18
- package/docs/assets/icons.svg +0 -1
- package/docs/assets/main.js +0 -60
- package/docs/assets/navigation.js +0 -1
- package/docs/assets/search.js +0 -1
- package/docs/assets/style.css +0 -1633
- package/docs/classes/BasicModelPipelineCreator.html +0 -10
- package/docs/classes/Callback.html +0 -7
- package/docs/classes/CyclicModelPipelineCreator.html +0 -10
- package/docs/classes/IterCheckerCallback.html +0 -8
- package/docs/classes/PipelineCreator.html +0 -6
- package/docs/classes/TimeCheckerCallback.html +0 -8
- package/docs/classes/UpdatesModelPipelineCreator.html +0 -10
- package/docs/functions/ab4.html +0 -8
- package/docs/functions/ab5.html +0 -8
- package/docs/functions/applyPipeline.html +0 -9
- package/docs/functions/getCallback.html +0 -3
- package/docs/functions/getIVP.html +0 -6
- package/docs/functions/getInputVector.html +0 -2
- package/docs/functions/getIvp2WebWorker.html +0 -6
- package/docs/functions/getJScode.html +0 -6
- package/docs/functions/getOutputNames.html +0 -4
- package/docs/functions/getPipelineCreator.html +0 -7
- package/docs/functions/lsoda.html +0 -8
- package/docs/functions/mrt.html +0 -11
- package/docs/functions/printE5.html +0 -76
- package/docs/functions/printHires.html +0 -76
- package/docs/functions/printOrego.html +0 -66
- package/docs/functions/printPollution.html +0 -163
- package/docs/functions/printRobertson.html +0 -60
- package/docs/functions/printVdpol.html +0 -66
- package/docs/functions/rk3.html +0 -8
- package/docs/functions/rk4.html +0 -8
- package/docs/functions/rkdp.html +0 -8
- package/docs/functions/ros34prw.html +0 -8
- package/docs/functions/ros3prw.html +0 -8
- package/docs/functions/solveIvp.html +0 -5
- package/docs/hierarchy.html +0 -1
- package/docs/index.html +0 -768
- package/docs/media/CONTRIBUTING.md +0 -74
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-
|
|
56
|
-
// Compute y''norm via finite difference
|
|
57
|
-
const result = cvYddNorm(mem, hg * sign);
|
|
58
|
-
retval = result.retval;
|
|
59
|
-
if (retval !== CV_SUCCESS) return retval;
|
|
60
|
-
|
|
61
|
-
const yddnrm = result.yddnrm;
|
|
62
|
-
|
|
63
|
-
// If yddnrm is zero, use current hg
|
|
64
|
-
if (yddnrm * hub * hub > 2.0)
|
|
65
|
-
hnew = Math.sqrt(2.0 / yddnrm);
|
|
66
|
-
else
|
|
67
|
-
hnew = Math.sqrt(hg * hub);
|
|
68
|
-
|
|
69
|
-
|
|
70
|
-
// Refine: make hnew be a geometric mean biased toward smaller
|
|
71
|
-
hnew = H_BIAS * hnew + (1.0 - H_BIAS) * hg;
|
|
72
|
-
|
|
73
|
-
// Check convergence
|
|
74
|
-
if (hnew / hg > 2.0 || hnew / hg < 0.5) continue;
|
|
75
|
-
// If converged, break
|
|
76
|
-
break;
|
|
77
|
-
}
|
|
78
|
-
|
|
79
|
-
// Bound hnew
|
|
80
|
-
hnew = Math.min(hnew, hub);
|
|
81
|
-
hnew = Math.max(hnew, hlb);
|
|
82
|
-
|
|
83
|
-
// Apply bounds on step size
|
|
84
|
-
if (mem.cv_hmax_inv > 0.0)
|
|
85
|
-
hnew = Math.min(hnew, 1.0 / mem.cv_hmax_inv);
|
|
86
|
-
|
|
87
|
-
if (mem.cv_hmin > 0.0)
|
|
88
|
-
hnew = Math.max(hnew, mem.cv_hmin);
|
|
89
|
-
|
|
90
|
-
|
|
91
|
-
// Bound by tdist
|
|
92
|
-
hnew = Math.min(hnew, tdist);
|
|
93
|
-
|
|
94
|
-
mem.cv_h = sign * hnew;
|
|
95
|
-
mem.cv_next_h = mem.cv_h;
|
|
96
|
-
mem.cv_hscale = mem.cv_h;
|
|
97
|
-
|
|
98
|
-
// Scale zn[1] = h * y'(t0)
|
|
99
|
-
vScale(mem.cv_h, mem.cv_zn[1], mem.cv_zn[1], N);
|
|
100
|
-
|
|
101
|
-
return CV_SUCCESS;
|
|
102
|
-
}
|
|
103
|
-
|
|
104
|
-
/**
|
|
105
|
-
* cvUpperBoundH0 - Compute upper bound on initial step size
|
|
106
|
-
* Based on ||y'|| weighted norm
|
|
107
|
-
*/
|
|
108
|
-
function cvUpperBoundH0(mem: CvodeMem, tdist: number): number {
|
|
109
|
-
const N = mem.cv_N;
|
|
110
|
-
|
|
111
|
-
// Get WRMS norm of y' (zn[1] = f(t0, y0) before scaling)
|
|
112
|
-
const hub_inv = wrmsNorm(N, mem.cv_zn[1], mem.cv_ewt);
|
|
113
|
-
|
|
114
|
-
// Bound based on tdist
|
|
115
|
-
let hub = HUB_FACTOR * tdist;
|
|
116
|
-
|
|
117
|
-
// Use smaller of two bounds
|
|
118
|
-
if (hub * hub_inv > 1.0)
|
|
119
|
-
hub = 1.0 / hub_inv;
|
|
120
|
-
|
|
121
|
-
|
|
122
|
-
return hub;
|
|
123
|
-
}
|
|
124
|
-
|
|
125
|
-
/**
|
|
126
|
-
* cvYddNorm - Estimate ||y''|| via finite difference
|
|
127
|
-
* y(t0 + hg) ~ y0 + hg*y'0
|
|
128
|
-
* y'(t0 + hg) = f(t0 + hg, y(t0 + hg))
|
|
129
|
-
* y'' ~ (y'(t0+hg) - y'(t0)) / hg
|
|
130
|
-
*/
|
|
131
|
-
function cvYddNorm(mem: CvodeMem, hg: number): { retval: number; yddnrm: number } {
|
|
132
|
-
const N = mem.cv_N;
|
|
133
|
-
|
|
134
|
-
// y = zn[0] + hg * zn[1] (zn[1] still holds unscaled f at this point)
|
|
135
|
-
vLinearSum(hg, mem.cv_zn[1], 1.0, mem.cv_zn[0], mem.cv_y, N);
|
|
136
|
-
|
|
137
|
-
// Evaluate f(t0 + hg, y)
|
|
138
|
-
const retval = mem.cv_f!(mem.cv_tn + hg, mem.cv_y, mem.cv_tempv, mem.cv_user_data);
|
|
139
|
-
mem.cv_nfe++;
|
|
140
|
-
if (retval < 0) return {retval: CV_RHSFUNC_FAIL, yddnrm: 0};
|
|
141
|
-
if (retval > 0) return {retval: RHSFUNC_RECVR, yddnrm: 0};
|
|
142
|
-
|
|
143
|
-
// tempv = (f(t0+hg, y) - zn[1]) / hg (estimate of y'')
|
|
144
|
-
const hg_inv = 1.0 / hg;
|
|
145
|
-
vLinearSum(hg_inv, mem.cv_tempv, -hg_inv, mem.cv_zn[1], mem.cv_tempv, N);
|
|
146
|
-
|
|
147
|
-
const yddnrm = wrmsNorm(N, mem.cv_tempv, mem.cv_ewt);
|
|
148
|
-
|
|
149
|
-
return {retval: CV_SUCCESS, yddnrm};
|
|
150
|
-
}
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
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|
|
@@ -1,258 +0,0 @@
|
|
|
1
|
-
/**
|
|
2
|
-
* TypeScript port of SUNDIALS CVODE v7.5.0 (https://github.com/LLNL/sundials)
|
|
3
|
-
*
|
|
4
|
-
* Copyright (c) 2025, Lawrence Livermore National Security, University of
|
|
5
|
-
* Maryland Baltimore County, and the SUNDIALS contributors.
|
|
6
|
-
* Copyright (c) 2013-2025, Lawrence Livermore National Security and
|
|
7
|
-
* Southern Methodist University.
|
|
8
|
-
* Copyright (c) 2002-2013, Lawrence Livermore National Security.
|
|
9
|
-
* Copyright (c) 2026 Datagrok.
|
|
10
|
-
*
|
|
11
|
-
* Licensed under the BSD-3-Clause License. See THIRD_PARTY_LICENSES
|
|
12
|
-
* for the full license text and provenance chain of the original code.
|
|
13
|
-
*/
|
|
14
|
-
|
|
15
|
-
// CVODE TypeScript port - Configuration and statistics I/O functions
|
|
16
|
-
// Ported from SUNDIALS CVODE v7.5.0 (cvode_io.c)
|
|
17
|
-
|
|
18
|
-
import {
|
|
19
|
-
CvodeMem,
|
|
20
|
-
CV_SUCCESS,
|
|
21
|
-
CV_SS,
|
|
22
|
-
CV_SV,
|
|
23
|
-
ADAMS_Q_MAX,
|
|
24
|
-
BDF_Q_MAX,
|
|
25
|
-
CV_ADAMS,
|
|
26
|
-
} from './common';
|
|
27
|
-
|
|
28
|
-
// ============================================================================
|
|
29
|
-
// Statistics interface
|
|
30
|
-
// ============================================================================
|
|
31
|
-
|
|
32
|
-
export interface CvodeStats {
|
|
33
|
-
nSteps: number;
|
|
34
|
-
nRhsEvals: number;
|
|
35
|
-
nLinSolvSetups: number;
|
|
36
|
-
nErrTestFails: number;
|
|
37
|
-
nNonlinSolvIters: number;
|
|
38
|
-
nNonlinSolvConvFails: number;
|
|
39
|
-
nJacEvals: number;
|
|
40
|
-
nGEvals: number;
|
|
41
|
-
lastOrder: number;
|
|
42
|
-
lastStep: number;
|
|
43
|
-
currentTime: number;
|
|
44
|
-
}
|
|
45
|
-
|
|
46
|
-
// ============================================================================
|
|
47
|
-
// Tolerance functions
|
|
48
|
-
// ============================================================================
|
|
49
|
-
|
|
50
|
-
/**
|
|
51
|
-
* Set scalar relative and absolute tolerances.
|
|
52
|
-
* Requires rtol >= 0 and atol >= 0.
|
|
53
|
-
*/
|
|
54
|
-
export function cvodeSStolerances(mem: CvodeMem, rtol: number, atol: number): number {
|
|
55
|
-
if (rtol < 0) {
|
|
56
|
-
mem.cv_error = 'cvodeSStolerances: rtol must be >= 0';
|
|
57
|
-
return -1;
|
|
58
|
-
}
|
|
59
|
-
if (atol < 0) {
|
|
60
|
-
mem.cv_error = 'cvodeSStolerances: atol must be >= 0';
|
|
61
|
-
return -1;
|
|
62
|
-
}
|
|
63
|
-
|
|
64
|
-
mem.cv_reltol = rtol;
|
|
65
|
-
mem.cv_Sabstol = atol;
|
|
66
|
-
mem.cv_itol = CV_SS;
|
|
67
|
-
mem.cv_atolmin0 = (atol === 0);
|
|
68
|
-
|
|
69
|
-
return CV_SUCCESS;
|
|
70
|
-
}
|
|
71
|
-
|
|
72
|
-
/**
|
|
73
|
-
* Set scalar relative tolerance and vector absolute tolerance.
|
|
74
|
-
* Requires rtol >= 0 and all atol[i] >= 0.
|
|
75
|
-
*/
|
|
76
|
-
export function cvodeSVtolerances(mem: CvodeMem, rtol: number, atol: Float64Array): number {
|
|
77
|
-
if (rtol < 0) {
|
|
78
|
-
mem.cv_error = 'cvodeSVtolerances: rtol must be >= 0';
|
|
79
|
-
return -1;
|
|
80
|
-
}
|
|
81
|
-
for (let i = 0; i < atol.length; i++) {
|
|
82
|
-
if (atol[i] < 0) {
|
|
83
|
-
mem.cv_error = `cvodeSVtolerances: atol[${i}] must be >= 0`;
|
|
84
|
-
return -1;
|
|
85
|
-
}
|
|
86
|
-
}
|
|
87
|
-
|
|
88
|
-
mem.cv_reltol = rtol;
|
|
89
|
-
mem.cv_Vabstol = new Float64Array(atol);
|
|
90
|
-
mem.cv_itol = CV_SV;
|
|
91
|
-
|
|
92
|
-
let minAtol = Infinity;
|
|
93
|
-
for (let i = 0; i < atol.length; i++)
|
|
94
|
-
if (atol[i] < minAtol) minAtol = atol[i];
|
|
95
|
-
|
|
96
|
-
mem.cv_atolmin0 = (minAtol === 0);
|
|
97
|
-
mem.cv_VabstolMallocDone = true;
|
|
98
|
-
|
|
99
|
-
return CV_SUCCESS;
|
|
100
|
-
}
|
|
101
|
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// ============================================================================
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// Optional input functions
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// ============================================================================
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/**
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* Set the maximum number of internal steps per call to CVode.
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*/
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export function cvodeSetMaxNumSteps(mem: CvodeMem, mxstep: number): number {
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mem.cv_mxstep = mxstep;
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return CV_SUCCESS;
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}
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/**
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* Set the maximum method order. Clamped to [1, qmax] where qmax is
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* ADAMS_Q_MAX or BDF_Q_MAX depending on the linear multistep method.
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*/
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export function cvodeSetMaxOrd(mem: CvodeMem, maxord: number): number {
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const qmax = (mem.cv_lmm === CV_ADAMS) ? ADAMS_Q_MAX : BDF_Q_MAX;
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if (maxord < 1) maxord = 1;
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if (maxord > qmax) maxord = qmax;
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mem.cv_qmax = maxord;
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return CV_SUCCESS;
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}
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/**
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* Set the maximum step size. If hmax <= 0, no upper limit is imposed
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* (cv_hmax_inv = 0). Otherwise cv_hmax_inv = 1 / hmax.
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*/
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export function cvodeSetMaxStep(mem: CvodeMem, hmax: number): number {
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if (hmax <= 0)
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mem.cv_hmax_inv = 0;
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else
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mem.cv_hmax_inv = 1.0 / hmax;
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return CV_SUCCESS;
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}
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/**
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* Set the minimum step size (stored as absolute value).
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*/
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export function cvodeSetMinStep(mem: CvodeMem, hmin: number): number {
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mem.cv_hmin = Math.abs(hmin);
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return CV_SUCCESS;
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}
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/**
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* Set the initial step size hint.
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*/
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export function cvodeSetInitStep(mem: CvodeMem, hin: number): number {
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mem.cv_hin = hin;
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return CV_SUCCESS;
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}
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/**
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* Set a stop time. Integration will not proceed past tstop.
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*/
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158
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export function cvodeSetStopTime(mem: CvodeMem, tstop: number): number {
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mem.cv_tstop = tstop;
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mem.cv_tstopset = true;
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mem.cv_tstopinterp = true;
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return CV_SUCCESS;
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}
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/**
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* Attach user data that will be passed to the RHS, Jacobian, and root
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|
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* functions.
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168
|
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*/
|
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169
|
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export function cvodeSetUserData(mem: CvodeMem, data: any): number {
|
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|
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mem.cv_user_data = data;
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|
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return CV_SUCCESS;
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}
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|
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|
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174
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/**
|
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175
|
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* Enable or disable BDF stability limit detection.
|
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176
|
-
*/
|
|
177
|
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export function cvodeSetStabLimDet(mem: CvodeMem, on: boolean): number {
|
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178
|
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mem.cv_sldeton = on;
|
|
179
|
-
return CV_SUCCESS;
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180
|
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}
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181
|
-
|
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182
|
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// ============================================================================
|
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183
|
-
// Statistics getters
|
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184
|
-
// ============================================================================
|
|
185
|
-
|
|
186
|
-
/** Return the total number of internal steps taken. */
|
|
187
|
-
export function cvodeGetNumSteps(mem: CvodeMem): number {
|
|
188
|
-
return mem.cv_nst;
|
|
189
|
-
}
|
|
190
|
-
|
|
191
|
-
/** Return the total number of RHS evaluations. */
|
|
192
|
-
export function cvodeGetNumRhsEvals(mem: CvodeMem): number {
|
|
193
|
-
return mem.cv_nfe;
|
|
194
|
-
}
|
|
195
|
-
|
|
196
|
-
/** Return the number of linear solver setup calls. */
|
|
197
|
-
export function cvodeGetNumLinSolvSetups(mem: CvodeMem): number {
|
|
198
|
-
return mem.cv_nsetups;
|
|
199
|
-
}
|
|
200
|
-
|
|
201
|
-
/** Return the number of error test failures. */
|
|
202
|
-
export function cvodeGetNumErrTestFails(mem: CvodeMem): number {
|
|
203
|
-
return mem.cv_netf;
|
|
204
|
-
}
|
|
205
|
-
|
|
206
|
-
/** Return the number of nonlinear solver iterations. */
|
|
207
|
-
export function cvodeGetNumNonlinSolvIters(mem: CvodeMem): number {
|
|
208
|
-
return mem.cv_nni;
|
|
209
|
-
}
|
|
210
|
-
|
|
211
|
-
/** Return the number of nonlinear solver convergence failures. */
|
|
212
|
-
export function cvodeGetNumNonlinSolvConvFails(mem: CvodeMem): number {
|
|
213
|
-
return mem.cv_ncfn;
|
|
214
|
-
}
|
|
215
|
-
|
|
216
|
-
/** Return the number of Jacobian evaluations (from the linear solver). */
|
|
217
|
-
export function cvodeGetNumJacEvals(mem: CvodeMem): number {
|
|
218
|
-
return mem.cv_lmem?.nje ?? 0;
|
|
219
|
-
}
|
|
220
|
-
|
|
221
|
-
/** Return the total number of root-function evaluations. */
|
|
222
|
-
export function cvodeGetNumGEvals(mem: CvodeMem): number {
|
|
223
|
-
return mem.cv_nge;
|
|
224
|
-
}
|
|
225
|
-
|
|
226
|
-
/** Return the method order used on the last successful step. */
|
|
227
|
-
export function cvodeGetLastOrder(mem: CvodeMem): number {
|
|
228
|
-
return mem.cv_qu;
|
|
229
|
-
}
|
|
230
|
-
|
|
231
|
-
/** Return the step size used on the last successful step. */
|
|
232
|
-
export function cvodeGetLastStep(mem: CvodeMem): number {
|
|
233
|
-
return mem.cv_hu;
|
|
234
|
-
}
|
|
235
|
-
|
|
236
|
-
/** Return the current internal time reached by the solver. */
|
|
237
|
-
export function cvodeGetCurrentTime(mem: CvodeMem): number {
|
|
238
|
-
return mem.cv_tn;
|
|
239
|
-
}
|
|
240
|
-
|
|
241
|
-
/**
|
|
242
|
-
* Return a snapshot of all integrator statistics as a plain object.
|
|
243
|
-
*/
|
|
244
|
-
export function cvodeGetIntegratorStats(mem: CvodeMem): CvodeStats {
|
|
245
|
-
return {
|
|
246
|
-
nSteps: cvodeGetNumSteps(mem),
|
|
247
|
-
nRhsEvals: cvodeGetNumRhsEvals(mem),
|
|
248
|
-
nLinSolvSetups: cvodeGetNumLinSolvSetups(mem),
|
|
249
|
-
nErrTestFails: cvodeGetNumErrTestFails(mem),
|
|
250
|
-
nNonlinSolvIters: cvodeGetNumNonlinSolvIters(mem),
|
|
251
|
-
nNonlinSolvConvFails: cvodeGetNumNonlinSolvConvFails(mem),
|
|
252
|
-
nJacEvals: cvodeGetNumJacEvals(mem),
|
|
253
|
-
nGEvals: cvodeGetNumGEvals(mem),
|
|
254
|
-
lastOrder: cvodeGetLastOrder(mem),
|
|
255
|
-
lastStep: cvodeGetLastStep(mem),
|
|
256
|
-
currentTime: cvodeGetCurrentTime(mem),
|
|
257
|
-
};
|
|
258
|
-
}
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
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/**
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2
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* TypeScript port of SUNDIALS CVODE v7.5.0 (https://github.com/LLNL/sundials)
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*
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* Copyright (c) 2025, Lawrence Livermore National Security, University of
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* Maryland Baltimore County, and the SUNDIALS contributors.
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* Copyright (c) 2013-2025, Lawrence Livermore National Security and
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* Southern Methodist University.
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* Copyright (c) 2002-2013, Lawrence Livermore National Security.
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* Copyright (c) 2026 Datagrok.
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*
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* Licensed under the BSD-3-Clause License. See THIRD_PARTY_LICENSES
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* for the full license text and provenance chain of the original code.
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*/
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-
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// CVODE TypeScript port - Dense linear solver interface
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// Translated from SUNDIALS cvode_ls.c
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//
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// Instead of SUNDIALS' SUNLinearSolver / SUNMatrix abstraction, we use
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// direct Float64Array[] matrices and dgefa / dgesl from dense_linalg.ts.
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import {CvodeMem, CvLsMem, CvodeJacFn, wrmsNorm,
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CV_SUCCESS, CV_RHSFUNC_FAIL, RHSFUNC_RECVR,
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CV_NO_FAILURES, CV_FAIL_BAD_J, CV_FAIL_OTHER,
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CVLS_MSBJ, CVLS_DGMAX, ONEPSM} from './common';
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import {dgefa, dgesl} from './dense_linalg';
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/**
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* cvodeSetLinearSolver - Initialize the dense linear solver.
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* Sets up CvLsMem, allocates matrix, sets function pointers on CvodeMem.
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*/
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export function cvodeSetLinearSolver(mem: CvodeMem): number {
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const N = mem.cv_N;
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const lmem = new CvLsMem();
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-
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// Allocate dense matrix A (N x N, row-major)
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lmem.A = new Array(N);
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lmem.savedJ = new Array(N);
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for (let i = 0; i < N; i++) {
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lmem.A[i] = new Float64Array(N);
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lmem.savedJ[i] = new Float64Array(N);
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}
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lmem.pivots = new Int32Array(N);
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43
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-
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// Set defaults
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lmem.jacDQ = true;
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46
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lmem.jacFn = null;
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lmem.jbad = true;
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48
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lmem.nje = 0;
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49
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lmem.nfeDQ = 0;
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50
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lmem.nstlj = 0;
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51
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lmem.tnlj = 0;
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52
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lmem.msbj = CVLS_MSBJ;
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53
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lmem.dgmax_jbad = CVLS_DGMAX;
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54
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-
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55
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// Attach to CvodeMem
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56
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mem.cv_lmem = lmem;
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57
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mem.cv_linit = cvLsInitialize;
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58
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mem.cv_lsetup = cvLsSetup;
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59
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mem.cv_lsolve = cvLsSolve;
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mem.cv_lfree = cvLsFree;
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61
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-
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62
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return CV_SUCCESS;
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63
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}
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64
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-
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/**
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* cvodeSetJacFn - Set a user-supplied Jacobian function.
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*/
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68
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export function cvodeSetJacFn(mem: CvodeMem, jac: CvodeJacFn | null): number {
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69
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const lmem = mem.cv_lmem;
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70
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if (!lmem) return -1;
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71
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-
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72
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if (jac) {
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lmem.jacDQ = false;
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74
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lmem.jacFn = jac;
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75
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} else {
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76
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lmem.jacDQ = true;
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77
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lmem.jacFn = null;
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78
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}
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return CV_SUCCESS;
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}
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-
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/**
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* cvLsInitialize - Initialize linear solver counters.
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*/
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function cvLsInitialize(mem: CvodeMem): number {
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86
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const lmem = mem.cv_lmem!;
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87
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lmem.nje = 0;
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lmem.nfeDQ = 0;
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lmem.nstlj = 0;
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lmem.jbad = true;
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return CV_SUCCESS;
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}
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/**
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95
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* cvLsSetup - Compute Jacobian and form/factor the linear system matrix A = I - gamma*J.
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*
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97
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* Heuristic for when to recompute Jacobian:
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98
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* - On first call (nstlj == 0)
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99
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* - If convfail is CV_FAIL_BAD_J (NLS flagged Jacobian as bad)
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* - If enough steps since last eval (nst >= nstlj + msbj)
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* - If gamma changed significantly (|gamrat - 1| > dgmax_jbad)
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*/
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103
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function cvLsSetup(mem: CvodeMem, convfail: number, ypred: Float64Array,
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fpred: Float64Array, jcurPtr: { value: boolean },
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105
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tmp1: Float64Array, tmp2: Float64Array,
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tmp3: Float64Array): number {
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const lmem = mem.cv_lmem!;
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const N = mem.cv_N;
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let retval: number;
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// Determine if Jacobian needs updating
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const jbad = lmem.jbad;
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let jok = !jbad;
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if (!jbad) {
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// Check gamma ratio
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if (Math.abs(mem.cv_gamrat - 1.0) > lmem.dgmax_jbad)
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jok = false;
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|
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// Check steps since last Jacobian
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if (mem.cv_nst >= lmem.nstlj + lmem.msbj)
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jok = false;
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// Check convfail
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if (convfail === CV_FAIL_BAD_J)
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jok = false;
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}
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128
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-
|
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129
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if (jok) {
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130
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// Reuse saved Jacobian, just form A = I - gamma*J
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jcurPtr.value = false;
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|
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133
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// Copy savedJ to A and form I - gamma*J
|
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134
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for (let i = 0; i < N; i++) {
|
|
135
|
-
for (let j = 0; j < N; j++)
|
|
136
|
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lmem.A[i][j] = -mem.cv_gamma * lmem.savedJ[i][j];
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|
137
|
-
|
|
138
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lmem.A[i][i] += 1.0;
|
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139
|
-
}
|
|
140
|
-
} else {
|
|
141
|
-
// Recompute Jacobian
|
|
142
|
-
lmem.nje++;
|
|
143
|
-
lmem.nstlj = mem.cv_nst;
|
|
144
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lmem.jbad = false;
|
|
145
|
-
jcurPtr.value = true;
|
|
146
|
-
|
|
147
|
-
// Evaluate Jacobian
|
|
148
|
-
if (lmem.jacDQ)
|
|
149
|
-
retval = cvLsDQJac(mem, mem.cv_tn, ypred, fpred, lmem.savedJ, tmp1, tmp2);
|
|
150
|
-
else
|
|
151
|
-
retval = lmem.jacFn!(mem.cv_tn, ypred, fpred, lmem.savedJ, mem.cv_user_data);
|
|
152
|
-
|
|
153
|
-
|
|
154
|
-
if (retval < 0) {
|
|
155
|
-
lmem.jbad = true;
|
|
156
|
-
return -1;
|
|
157
|
-
}
|
|
158
|
-
if (retval > 0) {
|
|
159
|
-
lmem.jbad = true;
|
|
160
|
-
return 1;
|
|
161
|
-
}
|
|
162
|
-
|
|
163
|
-
// Form A = I - gamma*J
|
|
164
|
-
for (let i = 0; i < N; i++) {
|
|
165
|
-
for (let j = 0; j < N; j++)
|
|
166
|
-
lmem.A[i][j] = -mem.cv_gamma * lmem.savedJ[i][j];
|
|
167
|
-
|
|
168
|
-
lmem.A[i][i] += 1.0;
|
|
169
|
-
}
|
|
170
|
-
}
|
|
171
|
-
|
|
172
|
-
// Factor A using LU decomposition
|
|
173
|
-
const info = dgefa(lmem.A, N, lmem.pivots);
|
|
174
|
-
if (info !== 0) {
|
|
175
|
-
lmem.jbad = true;
|
|
176
|
-
return 1; // recoverable
|
|
177
|
-
}
|
|
178
|
-
|
|
179
|
-
return CV_SUCCESS;
|
|
180
|
-
}
|
|
181
|
-
|
|
182
|
-
/**
|
|
183
|
-
* cvLsSolve - Solve the linear system A*x = b using LU factors.
|
|
184
|
-
*/
|
|
185
|
-
function cvLsSolve(mem: CvodeMem, b: Float64Array, weight: Float64Array,
|
|
186
|
-
ycur: Float64Array, fcur: Float64Array): number {
|
|
187
|
-
const lmem = mem.cv_lmem!;
|
|
188
|
-
const N = mem.cv_N;
|
|
189
|
-
|
|
190
|
-
dgesl(lmem.A, N, lmem.pivots, b);
|
|
191
|
-
|
|
192
|
-
// Apply gamma/gammap correction if gamma has changed since last setup
|
|
193
|
-
if (mem.cv_gamrat !== 1.0) {
|
|
194
|
-
const factor = 2.0 / (1.0 + mem.cv_gamrat);
|
|
195
|
-
for (let i = 0; i < N; i++)
|
|
196
|
-
b[i] *= factor;
|
|
197
|
-
}
|
|
198
|
-
|
|
199
|
-
return CV_SUCCESS;
|
|
200
|
-
}
|
|
201
|
-
|
|
202
|
-
/**
|
|
203
|
-
* cvLsDQJac - Compute difference-quotient Jacobian approximation.
|
|
204
|
-
*
|
|
205
|
-
* For each column j:
|
|
206
|
-
* sigma_j = max(|y_j|, 1/ewt_j) * sqrt(uround)
|
|
207
|
-
* J[:,j] = (f(t, y + sigma_j*e_j) - f(t, y)) / sigma_j
|
|
208
|
-
*/
|
|
209
|
-
function cvLsDQJac(mem: CvodeMem, t: number, y: Float64Array, fy: Float64Array,
|
|
210
|
-
J: Float64Array[], tmp1: Float64Array, tmp2: Float64Array): number {
|
|
211
|
-
const N = mem.cv_N;
|
|
212
|
-
const lmem = mem.cv_lmem!;
|
|
213
|
-
const uround = 2.2204460492503131e-16;
|
|
214
|
-
const srur = Math.sqrt(uround);
|
|
215
|
-
const fnorm_val = wrmsNorm(N, fy, mem.cv_ewt);
|
|
216
|
-
const minInc = (fnorm_val !== 0.0) ? (1000.0 * Math.abs(mem.cv_h) * uround * N * fnorm_val) : 1.0;
|
|
217
|
-
|
|
218
|
-
// Use tmp1 as perturbed y, tmp2 as perturbed f
|
|
219
|
-
for (let j = 0; j < N; j++) {
|
|
220
|
-
const yjsaved = y[j];
|
|
221
|
-
let inc = Math.max(srur * Math.abs(yjsaved), minInc / mem.cv_ewt[j]);
|
|
222
|
-
// Ensure inc has same sign (positive since we want to increase)
|
|
223
|
-
|
|
224
|
-
// Perturb y[j]
|
|
225
|
-
tmp1.set(y);
|
|
226
|
-
tmp1[j] = yjsaved + inc;
|
|
227
|
-
inc = tmp1[j] - yjsaved; // exact increment after rounding
|
|
228
|
-
|
|
229
|
-
// Evaluate f(t, y + inc*e_j)
|
|
230
|
-
const retval = mem.cv_f!(t, tmp1, tmp2, mem.cv_user_data);
|
|
231
|
-
lmem.nfeDQ++;
|
|
232
|
-
mem.cv_nfe++;
|
|
233
|
-
if (retval !== 0) return retval;
|
|
234
|
-
|
|
235
|
-
// Compute column j of Jacobian: (f_perturbed - f) / inc
|
|
236
|
-
const inc_inv = 1.0 / inc;
|
|
237
|
-
for (let i = 0; i < N; i++)
|
|
238
|
-
J[i][j] = (tmp2[i] - fy[i]) * inc_inv;
|
|
239
|
-
}
|
|
240
|
-
|
|
241
|
-
return CV_SUCCESS;
|
|
242
|
-
}
|
|
243
|
-
|
|
244
|
-
/**
|
|
245
|
-
* cvLsFree - Free linear solver memory (no-op in TS, GC handles it).
|
|
246
|
-
*/
|
|
247
|
-
function cvLsFree(mem: CvodeMem): void {
|
|
248
|
-
mem.cv_lmem = null;
|
|
249
|
-
}
|
|
@@ -1 +0,0 @@
|
|
|
1
|
-
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