causantic 0.2.0

package/dist/eval/experiments/topic-continuity/run-experiment.d.ts

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+/**
+ * Main orchestrator for the topic continuity detection experiment.
+ *
+ * Compares embedding-only, lexical-only, and hybrid classifiers
+ * across multiple models and performs feature ablation analysis.
+ */
+import type { ClassificationResult, ClassifierMetrics, ExperimentReport } from './types.js';
+/**
+ * Compute ROC AUC from classification results.
+ * Positive class: continuation (label = 1)
+ * Negative class: new_topic (label = 0)
+ */
+export declare function computeRocAuc(results: ClassificationResult[]): number;
+/**
+ * Find optimal threshold using Youden's J statistic.
+ */
+export declare function findOptimalThreshold(results: ClassificationResult[]): number;
+/**
+ * Compute all classifier metrics.
+ */
+export declare function computeMetrics(results: ClassificationResult[]): ClassifierMetrics;
+export interface ExperimentOptions {
+    /** Claude projects directory containing session files. */
+    projectsDir: string;
+    /** Maximum sessions to process. Default: 20. */
+    maxSessions?: number;
+    /** Time gap threshold in minutes. Default: 30. */
+    timeGapMinutes?: number;
+    /** Models to evaluate. Default: all registered models. */
+    modelIds?: string[];
+}
+/**
+ * Run the complete topic continuity experiment.
+ */
+export declare function runTopicContinuityExperiment(options: ExperimentOptions): Promise<ExperimentReport>;
+/**
+ * Export transitions dataset to JSON for further analysis.
+ */
+export declare function exportTransitionsDataset(options: ExperimentOptions, outputPath: string): Promise<void>;
+//# sourceMappingURL=run-experiment.d.ts.map

package/dist/eval/experiments/topic-continuity/run-experiment.d.ts.map

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package/dist/eval/experiments/topic-continuity/run-experiment.js

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+/**
+ * Main orchestrator for the topic continuity detection experiment.
+ *
+ * Compares embedding-only, lexical-only, and hybrid classifiers
+ * across multiple models and performs feature ablation analysis.
+ */
+import { readdir, stat } from 'node:fs/promises';
+import { join } from 'node:path';
+import { getAllModelIds } from '../../../models/model-registry.js';
+import { discoverSessions } from '../../corpus-builder.js';
+import { getSessionInfo } from '../../../parser/session-reader.js';
+import { generateTransitionLabels, computeDatasetStats, } from './labeler.js';
+import { embedTransitions, classifyWithEmbeddings, } from './embedding-classifier.js';
+import { classifyWithHybrid, classifyWithLexicalOnly, classifyWithAblation, ABLATION_CONFIGS, } from './hybrid-classifier.js';
+/**
+ * Compute ROC AUC from classification results.
+ * Positive class: continuation (label = 1)
+ * Negative class: new_topic (label = 0)
+ */
+export function computeRocAuc(results) {
+    const positives = [];
+    const negatives = [];
+    for (const r of results) {
+        if (r.groundTruth === 'continuation') {
+            positives.push(r.continuationScore);
+        }
+        else {
+            negatives.push(r.continuationScore);
+        }
+    }
+    if (positives.length === 0 || negatives.length === 0)
+        return 0.5;
+    // Wilcoxon-Mann-Whitney statistic
+    let concordant = 0;
+    let ties = 0;
+    for (const pos of positives) {
+        for (const neg of negatives) {
+            if (pos > neg)
+                concordant++;
+            else if (pos === neg)
+                ties++;
+        }
+    }
+    return (concordant + 0.5 * ties) / (positives.length * negatives.length);
+}
+/**
+ * Find optimal threshold using Youden's J statistic.
+ */
+export function findOptimalThreshold(results) {
+    const scores = results.map((r) => r.continuationScore).sort((a, b) => a - b);
+    const uniqueThresholds = [...new Set(scores)];
+    let bestThreshold = 0.5;
+    let bestJ = -Infinity;
+    for (const threshold of uniqueThresholds) {
+        const { tpr, fpr } = computeRates(results, threshold);
+        const j = tpr - fpr;
+        if (j > bestJ) {
+            bestJ = j;
+            bestThreshold = threshold;
+        }
+    }
+    return bestThreshold;
+}
+/**
+ * Compute TPR and FPR at a given threshold.
+ */
+function computeRates(results, threshold) {
+    let tp = 0, fn = 0, fp = 0, tn = 0;
+    for (const r of results) {
+        const predicted = r.continuationScore >= threshold ? 'continuation' : 'new_topic';
+        if (r.groundTruth === 'continuation') {
+            if (predicted === 'continuation')
+                tp++;
+            else
+                fn++;
+        }
+        else {
+            if (predicted === 'continuation')
+                fp++;
+            else
+                tn++;
+        }
+    }
+    const tpr = tp + fn > 0 ? tp / (tp + fn) : 0;
+    const fpr = fp + tn > 0 ? fp / (fp + tn) : 0;
+    return { tpr, fpr };
+}
+/**
+ * Compute precision, recall, F1 at a given threshold.
+ */
+function computePRF(results, threshold) {
+    let tp = 0, fp = 0, fn = 0;
+    for (const r of results) {
+        const predicted = r.continuationScore >= threshold ? 'continuation' : 'new_topic';
+        if (r.groundTruth === 'continuation') {
+            if (predicted === 'continuation')
+                tp++;
+            else
+                fn++;
+        }
+        else {
+            if (predicted === 'continuation')
+                fp++;
+        }
+    }
+    const precision = tp + fp > 0 ? tp / (tp + fp) : 0;
+    const recall = tp + fn > 0 ? tp / (tp + fn) : 0;
+    const f1 = precision + recall > 0 ? (2 * precision * recall) / (precision + recall) : 0;
+    return { precision, recall, f1 };
+}
+/**
+ * Compute all classifier metrics.
+ */
+export function computeMetrics(results) {
+    const rocAuc = computeRocAuc(results);
+    const threshold = findOptimalThreshold(results);
+    const { precision, recall, f1 } = computePRF(results, threshold);
+    return { rocAuc, precision, recall, f1, threshold };
+}
+/**
+ * Discover all session files across all project subdirectories.
+ */
+async function discoverAllSessions(projectsRootDir) {
+    const allSessions = [];
+    try {
+        const projectDirs = await readdir(projectsRootDir);
+        for (const dir of projectDirs) {
+            const projectPath = join(projectsRootDir, dir);
+            try {
+                const dirStat = await stat(projectPath);
+                if (!dirStat.isDirectory())
+                    continue;
+                const sessions = await discoverSessions(projectPath);
+                for (const sessionPath of sessions) {
+                    const sessionStat = await stat(sessionPath);
+                    allSessions.push({ path: sessionPath, size: sessionStat.size });
+                }
+            }
+            catch {
+                // Skip inaccessible directories
+            }
+        }
+    }
+    catch {
+        // Fall back to treating projectsRootDir as a single project
+        const sessions = await discoverSessions(projectsRootDir);
+        for (const sessionPath of sessions) {
+            const sessionStat = await stat(sessionPath);
+            allSessions.push({ path: sessionPath, size: sessionStat.size });
+        }
+    }
+    // Sort by size descending (richest sessions first)
+    allSessions.sort((a, b) => b.size - a.size);
+    return allSessions.map((s) => s.path);
+}
+/**
+ * Run the complete topic continuity experiment.
+ */
+export async function runTopicContinuityExperiment(options) {
+    const { projectsDir, maxSessions = 20, timeGapMinutes = 30, modelIds = getAllModelIds(), } = options;
+    console.log('='.repeat(70));
+    console.log('  TOPIC CONTINUITY DETECTION EXPERIMENT');
+    console.log('='.repeat(70));
+    // Step 1: Discover sessions across all project directories
+    console.log('\n--- Discovering sessions ---');
+    const sessionPaths = await discoverAllSessions(projectsDir);
+    const selectedPaths = sessionPaths.slice(0, maxSessions);
+    console.log(`Found ${sessionPaths.length} sessions, using ${selectedPaths.length}`);
+    // Step 2: Build session sources
+    const sessionSources = [];
+    for (const path of selectedPaths) {
+        const info = await getSessionInfo(path);
+        sessionSources.push({
+            path,
+            sessionId: info.sessionId,
+            sessionSlug: info.slug,
+        });
+    }
+    // Step 3: Generate labeled transitions
+    console.log('\n--- Generating transition labels ---');
+    const transitions = await generateTransitionLabels(sessionSources, { timeGapMinutes });
+    const stats = computeDatasetStats(transitions);
+    console.log(`\nDataset statistics:`);
+    console.log(`  Total transitions: ${stats.totalTransitions}`);
+    console.log(`  Continuations: ${stats.continuationCount}`);
+    console.log(`  New topics: ${stats.newTopicCount}`);
+    console.log(`  High confidence: ${stats.highConfidenceCount}`);
+    console.log(`  By source:`);
+    for (const [source, count] of Object.entries(stats.byLabelSource)) {
+        console.log(`    ${source}: ${count}`);
+    }
+    // Filter to transitions with prior context
+    const validTransitions = transitions.filter((t) => t.prevAssistantText.trim());
+    console.log(`\nValid transitions (with prior context): ${validTransitions.length}`);
+    // Step 4: Evaluate lexical-only classifier (no embedding needed)
+    console.log('\n--- Evaluating lexical-only classifier ---');
+    const lexicalResults = classifyWithLexicalOnly(validTransitions);
+    const lexicalMetrics = computeMetrics(lexicalResults);
+    console.log(`  ROC AUC: ${lexicalMetrics.rocAuc.toFixed(3)}`);
+    console.log(`  F1: ${lexicalMetrics.f1.toFixed(3)} @ threshold ${lexicalMetrics.threshold.toFixed(3)}`);
+    // Step 5: Evaluate each model
+    const modelResults = [];
+    let firstEmbedded = null;
+    for (const modelId of modelIds) {
+        console.log(`\n--- Evaluating ${modelId} ---`);
+        try {
+            // Embed transitions
+            const embedded = await embedTransitions(modelId, validTransitions);
+            // Save first for ablation study
+            if (!firstEmbedded) {
+                firstEmbedded = embedded;
+            }
+            // Embedding-only classification
+            const embeddingResults = classifyWithEmbeddings(embedded);
+            const embeddingMetrics = computeMetrics(embeddingResults);
+            // Hybrid classification
+            const hybridResults = classifyWithHybrid(embedded);
+            const hybridMetrics = computeMetrics(hybridResults);
+            modelResults.push({
+                modelId,
+                embeddingOnly: embeddingMetrics,
+                lexicalOnly: lexicalMetrics,
+                hybrid: hybridMetrics,
+            });
+            console.log(`  Embedding-only: AUC=${embeddingMetrics.rocAuc.toFixed(3)}, F1=${embeddingMetrics.f1.toFixed(3)}`);
+            console.log(`  Hybrid: AUC=${hybridMetrics.rocAuc.toFixed(3)}, F1=${hybridMetrics.f1.toFixed(3)}`);
+        }
+        catch (err) {
+            console.error(`  Failed: ${err}`);
+        }
+    }
+    // Step 6: Feature ablation study
+    console.log('\n--- Feature ablation study ---');
+    const featureAblation = [];
+    if (firstEmbedded) {
+        // Compute baseline (embedding-only)
+        const baselineResults = classifyWithEmbeddings(firstEmbedded);
+        const baselineAuc = computeRocAuc(baselineResults);
+        for (const config of ABLATION_CONFIGS) {
+            const ablatedResults = classifyWithAblation(firstEmbedded, config.flags);
+            const ablatedAuc = computeRocAuc(ablatedResults);
+            featureAblation.push({
+                featureName: config.name,
+                baselineRocAuc: baselineAuc,
+                withFeatureRocAuc: ablatedAuc,
+                deltaRocAuc: ablatedAuc - baselineAuc,
+            });
+            console.log(`  ${config.name}: AUC=${ablatedAuc.toFixed(3)} (delta=${(ablatedAuc - baselineAuc >= 0 ? '+' : '')}${(ablatedAuc - baselineAuc).toFixed(3)})`);
+        }
+    }
+    // Step 7: Generate recommendations
+    const recommendations = generateRecommendations(modelResults, featureAblation);
+    // Print summary
+    printSummaryTable(modelResults);
+    printAblationTable(featureAblation);
+    return {
+        name: 'topic-continuity-detection',
+        description: 'Classify user messages as topic continuations or new topics',
+        dataset: stats,
+        modelResults,
+        featureAblation,
+        recommendations,
+        completedAt: new Date().toISOString(),
+    };
+}
+/**
+ * Generate recommendations based on results.
+ */
+function generateRecommendations(modelResults, ablation) {
+    const recommendations = [];
+    // Find best model
+    if (modelResults.length > 0) {
+        const bestHybrid = modelResults.reduce((a, b) => b.hybrid.rocAuc > a.hybrid.rocAuc ? b : a);
+        recommendations.push(`Best hybrid model: ${bestHybrid.modelId} (AUC=${bestHybrid.hybrid.rocAuc.toFixed(3)})`);
+        // Check if hybrid beats embedding-only
+        const avgImprovement = modelResults.reduce((sum, m) => sum + (m.hybrid.rocAuc - m.embeddingOnly.rocAuc), 0) /
+            modelResults.length;
+        if (avgImprovement > 0.01) {
+            recommendations.push(`Hybrid improves on embedding-only by +${avgImprovement.toFixed(3)} AUC on average`);
+        }
+        else {
+            recommendations.push(`Hybrid provides minimal improvement over embedding-only (${avgImprovement >= 0 ? '+' : ''}${avgImprovement.toFixed(3)} AUC)`);
+        }
+    }
+    // Find most valuable features
+    const sortedAblation = [...ablation].sort((a, b) => b.deltaRocAuc - a.deltaRocAuc);
+    const topFeatures = sortedAblation.filter((a) => a.deltaRocAuc > 0.01);
+    if (topFeatures.length > 0) {
+        recommendations.push(`Most valuable features: ${topFeatures.map((f) => f.featureName).join(', ')}`);
+    }
+    return recommendations;
+}
+/**
+ * Print model comparison summary table.
+ */
+function printSummaryTable(results) {
+    if (results.length === 0)
+        return;
+    console.log('\n' + '='.repeat(90));
+    console.log('  MODEL COMPARISON SUMMARY');
+    console.log('='.repeat(90));
+    const header = [
+        pad('Model', 15),
+        pad('Emb AUC', 10),
+        pad('Emb F1', 8),
+        pad('Lex AUC', 10),
+        pad('Lex F1', 8),
+        pad('Hyb AUC', 10),
+        pad('Hyb F1', 8),
+    ];
+    console.log(header.join(' | '));
+    console.log('-'.repeat(90));
+    for (const r of results) {
+        const row = [
+            pad(r.modelId, 15),
+            pad(r.embeddingOnly.rocAuc.toFixed(3), 10),
+            pad(r.embeddingOnly.f1.toFixed(3), 8),
+            pad(r.lexicalOnly.rocAuc.toFixed(3), 10),
+            pad(r.lexicalOnly.f1.toFixed(3), 8),
+            pad(r.hybrid.rocAuc.toFixed(3), 10),
+            pad(r.hybrid.f1.toFixed(3), 8),
+        ];
+        console.log(row.join(' | '));
+    }
+    console.log('='.repeat(90));
+}
+/**
+ * Print feature ablation table.
+ */
+function printAblationTable(ablation) {
+    if (ablation.length === 0)
+        return;
+    console.log('\n' + '='.repeat(70));
+    console.log('  FEATURE ABLATION');
+    console.log('='.repeat(70));
+    const header = [
+        pad('Configuration', 30),
+        pad('ROC AUC', 10),
+        pad('Delta', 10),
+    ];
+    console.log(header.join(' | '));
+    console.log('-'.repeat(70));
+    for (const a of ablation) {
+        const delta = a.deltaRocAuc >= 0 ? `+${a.deltaRocAuc.toFixed(3)}` : a.deltaRocAuc.toFixed(3);
+        const row = [
+            pad(a.featureName, 30),
+            pad(a.withFeatureRocAuc.toFixed(3), 10),
+            pad(delta, 10),
+        ];
+        console.log(row.join(' | '));
+    }
+    console.log('='.repeat(70));
+}
+function pad(str, width) {
+    return str.padEnd(width).slice(0, width);
+}
+/**
+ * Export transitions dataset to JSON for further analysis.
+ */
+export async function exportTransitionsDataset(options, outputPath) {
+    const { projectsDir, maxSessions = 20, timeGapMinutes = 30 } = options;
+    const sessionPaths = await discoverAllSessions(projectsDir);
+    const selectedPaths = sessionPaths.slice(0, maxSessions);
+    const sessionSources = [];
+    for (const path of selectedPaths) {
+        const info = await getSessionInfo(path);
+        sessionSources.push({
+            path,
+            sessionId: info.sessionId,
+            sessionSlug: info.slug,
+        });
+    }
+    const transitions = await generateTransitionLabels(sessionSources, { timeGapMinutes });
+    const stats = computeDatasetStats(transitions);
+    const { writeFile } = await import('node:fs/promises');
+    await writeFile(outputPath, JSON.stringify({ transitions, stats, exportedAt: new Date().toISOString() }, null, 2));
+    console.log(`Exported ${transitions.length} transitions to ${outputPath}`);
+}
+//# sourceMappingURL=run-experiment.js.map

package/dist/eval/experiments/topic-continuity/run-experiment.js.map

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package/dist/eval/experiments/topic-continuity/types.d.ts

@@ -0,0 +1,146 @@
+/**
+ * Types for the topic continuity detection experiment.
+ *
+ * This experiment classifies whether a user's message continues the
+ * previous topic or starts a new topic, supporting the D-T-D model's
+ * edge creation logic.
+ */
+export type TransitionLabel = 'continuation' | 'new_topic';
+export type Confidence = 'high' | 'medium' | 'low';
+/**
+ * A transition between two consecutive turns in a session.
+ */
+export interface TurnTransition {
+    /** Unique identifier for this transition. */
+    id: string;
+    /** Session ID where this transition occurs. */
+    sessionId: string;
+    /** Session slug (project identifier). */
+    sessionSlug: string;
+    /** Index of the previous turn (with assistant output). */
+    prevTurnIndex: number;
+    /** Index of the next turn (with user input). */
+    nextTurnIndex: number;
+    /** The previous assistant's response text. */
+    prevAssistantText: string;
+    /** The next user's input text. */
+    nextUserText: string;
+    /** Time gap in milliseconds between turns. */
+    timeGapMs: number;
+    /** Ground truth label. */
+    label: TransitionLabel;
+    /** Confidence in the label. */
+    confidence: Confidence;
+    /** Source of the label (e.g., 'session-boundary', 'time-gap', 'explicit-marker'). */
+    labelSource: string;
+}
+/**
+ * Features extracted for a turn transition.
+ */
+export interface TransitionFeatures {
+    /** Minimum embedding distance between user text and assistant chunks. */
+    embeddingDistanceMin: number;
+    /** Mean embedding distance between user text and assistant chunks. */
+    embeddingDistanceMean: number;
+    /** Time gap in minutes. */
+    timeGapMinutes: number;
+    /** Whether the user text contains topic-shift markers. */
+    hasTopicShiftMarker: boolean;
+    /** Whether the user text contains continuation markers. */
+    hasContinuationMarker: boolean;
+    /** Proportion of file paths shared between assistant and user text. */
+    filePathOverlap: number;
+    /** Proportion of significant keywords shared. */
+    keywordOverlap: number;
+}
+/**
+ * Classification result for a single transition.
+ */
+export interface ClassificationResult {
+    /** Transition ID. */
+    transitionId: string;
+    /** Ground truth label. */
+    groundTruth: TransitionLabel;
+    /** Predicted probability of continuation (0 = new_topic, 1 = continuation). */
+    continuationScore: number;
+    /** Extracted features. */
+    features: TransitionFeatures;
+}
+/**
+ * Performance metrics for a classifier.
+ */
+export interface ClassifierMetrics {
+    /** ROC AUC score. */
+    rocAuc: number;
+    /** Precision at optimal threshold. */
+    precision: number;
+    /** Recall at optimal threshold. */
+    recall: number;
+    /** F1 score at optimal threshold. */
+    f1: number;
+    /** Optimal threshold (via Youden's J). */
+    threshold: number;
+}
+/**
+ * Results for a single model across all classifier types.
+ */
+export interface ModelResults {
+    modelId: string;
+    embeddingOnly: ClassifierMetrics;
+    lexicalOnly: ClassifierMetrics;
+    hybrid: ClassifierMetrics;
+}
+/**
+ * Feature ablation result showing contribution of each feature.
+ */
+export interface FeatureAblation {
+    featureName: string;
+    baselineRocAuc: number;
+    withFeatureRocAuc: number;
+    deltaRocAuc: number;
+}
+/**
+ * Dataset statistics.
+ */
+export interface DatasetStats {
+    totalTransitions: number;
+    continuationCount: number;
+    newTopicCount: number;
+    highConfidenceCount: number;
+    mediumConfidenceCount: number;
+    lowConfidenceCount: number;
+    byLabelSource: Record<string, number>;
+}
+/**
+ * Complete experiment report.
+ */
+export interface ExperimentReport {
+    name: string;
+    description: string;
+    dataset: DatasetStats;
+    modelResults: ModelResults[];
+    featureAblation: FeatureAblation[];
+    recommendations: string[];
+    completedAt: string;
+}
+/**
+ * Threshold sweep result for tuning.
+ */
+export interface ThresholdSweepRow {
+    threshold: number;
+    truePositiveRate: number;
+    falsePositiveRate: number;
+    precision: number;
+    recall: number;
+    f1: number;
+}
+/**
+ * Time gap threshold sweep result.
+ */
+export interface TimeGapSweepRow {
+    timeGapMinutes: number;
+    transitionsLabeled: number;
+    newTopicCount: number;
+    continuationCount: number;
+}
+//# sourceMappingURL=types.d.ts.map

package/dist/eval/experiments/topic-continuity/types.d.ts.map

@@ -0,0 +1 @@
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package/dist/eval/experiments/topic-continuity/types.js

@@ -0,0 +1,9 @@
+/**
+ * Types for the topic continuity detection experiment.
+ *
+ * This experiment classifies whether a user's message continues the
+ * previous topic or starts a new topic, supporting the D-T-D model's
+ * edge creation logic.
+ */
+export {};
+//# sourceMappingURL=types.js.map

package/dist/eval/experiments/topic-continuity/types.js.map

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package/dist/eval/experiments/truncation.d.ts

@@ -0,0 +1,21 @@
+/**
+ * Experiment 1: Same-Model Truncation Test
+ *
+ * Question: How much does jina-small's 8K context actually help vs 512-token truncation?
+ *
+ * Embeds the existing corpus with jina-small at full context (baseline, reuses cached embeddings)
+ * and with chunk text hard-truncated to ~512 tokens (~1,792 chars). Compares ROC AUC,
+ * silhouette, and cluster membership overlap.
+ */
+import type { Chunk } from '../../parser/types.js';
+import type { LabeledPair } from '../annotation-schema.js';
+import { type SingleModelResult } from './single-model-run.js';
+import { type ExperimentResult } from './types.js';
+/**
+ * Run the truncation experiment.
+ *
+ * If baselineResult is provided (from a prior run), reuses it to avoid
+ * re-embedding the full corpus.
+ */
+export declare function runTruncationExperiment(chunks: Chunk[], pairs: LabeledPair[], baselineResult?: SingleModelResult): Promise<ExperimentResult>;
+//# sourceMappingURL=truncation.d.ts.map

package/dist/eval/experiments/truncation.d.ts.map

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