@wentorai/research-plugins 1.3.1 → 1.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +32 -56
- package/curated/analysis/README.md +1 -13
- package/curated/domains/README.md +1 -5
- package/curated/literature/README.md +1 -10
- package/curated/research/README.md +1 -18
- package/curated/tools/README.md +1 -12
- package/curated/writing/README.md +1 -5
- package/index.ts +88 -5
- package/openclaw.plugin.json +3 -12
- package/package.json +3 -5
- package/skills/analysis/dataviz/SKILL.md +1 -1
- package/skills/analysis/dataviz/color-accessibility-guide/SKILL.md +1 -1
- package/skills/analysis/dataviz/geospatial-viz-guide/SKILL.md +1 -1
- package/skills/analysis/dataviz/interactive-viz-guide/SKILL.md +1 -1
- package/skills/analysis/dataviz/network-visualization-guide/SKILL.md +1 -1
- package/skills/analysis/dataviz/publication-figures-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/SKILL.md +1 -1
- package/skills/analysis/econometrics/causal-inference-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/iv-regression-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/mostly-harmless-guide/SKILL.md +3 -10
- package/skills/analysis/econometrics/panel-data-analyst/SKILL.md +1 -1
- package/skills/analysis/econometrics/panel-data-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/stata-accounting-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/stata-analyst-guide/SKILL.md +1 -1
- package/skills/analysis/econometrics/time-series-guide/SKILL.md +1 -1
- package/skills/analysis/statistics/SKILL.md +2 -2
- package/skills/analysis/statistics/bayesian-statistics-guide/SKILL.md +1 -1
- package/skills/analysis/statistics/meta-analysis-guide/SKILL.md +2 -2
- package/skills/analysis/statistics/nonparametric-tests-guide/SKILL.md +1 -1
- package/skills/analysis/statistics/power-analysis-guide/SKILL.md +1 -1
- package/skills/analysis/statistics/sem-guide/SKILL.md +1 -1
- package/skills/analysis/statistics/survival-analysis-guide/SKILL.md +1 -1
- package/skills/analysis/wrangling/SKILL.md +1 -1
- package/skills/analysis/wrangling/data-cleaning-pipeline/SKILL.md +1 -1
- package/skills/analysis/wrangling/missing-data-handling/SKILL.md +1 -1
- package/skills/analysis/wrangling/questionnaire-design-guide/SKILL.md +1 -1
- package/skills/analysis/wrangling/stata-data-cleaning/SKILL.md +1 -1
- package/skills/analysis/wrangling/survey-data-processing/SKILL.md +1 -1
- package/skills/analysis/wrangling/text-mining-guide/SKILL.md +1 -1
- package/skills/domains/ai-ml/SKILL.md +3 -2
- package/skills/domains/ai-ml/computer-vision-guide/SKILL.md +1 -1
- package/skills/domains/ai-ml/generative-ai-guide/SKILL.md +1 -0
- package/skills/domains/ai-ml/huggingface-api/SKILL.md +251 -0
- package/skills/domains/ai-ml/llm-evaluation-guide/SKILL.md +1 -1
- package/skills/domains/ai-ml/prompt-engineering-research/SKILL.md +1 -1
- package/skills/domains/ai-ml/reinforcement-learning-guide/SKILL.md +1 -1
- package/skills/domains/ai-ml/transformer-architecture-guide/SKILL.md +1 -1
- package/skills/domains/biomedical/SKILL.md +9 -2
- package/skills/domains/biomedical/alphafold-api/SKILL.md +227 -0
- package/skills/domains/biomedical/biothings-api/SKILL.md +296 -0
- package/skills/domains/biomedical/clinical-research-guide/SKILL.md +1 -1
- package/skills/domains/biomedical/clinicaltrials-api-v2/SKILL.md +216 -0
- package/skills/domains/biomedical/enrichr-api/SKILL.md +264 -0
- package/skills/domains/biomedical/ensembl-rest-api/SKILL.md +204 -0
- package/skills/domains/biomedical/epidemiology-guide/SKILL.md +1 -1
- package/skills/domains/biomedical/genomics-analysis-guide/SKILL.md +1 -1
- package/skills/domains/biomedical/medical-data-api/SKILL.md +197 -0
- package/skills/domains/biomedical/medical-imaging-guide/SKILL.md +1 -1
- package/skills/domains/biomedical/pdb-structure-api/SKILL.md +219 -0
- package/skills/domains/business/SKILL.md +2 -3
- package/skills/domains/business/innovation-management-guide/SKILL.md +1 -1
- package/skills/domains/business/market-analysis-guide/SKILL.md +1 -1
- package/skills/domains/business/operations-research-guide/SKILL.md +1 -1
- package/skills/domains/business/strategic-management-guide/SKILL.md +1 -1
- package/skills/domains/chemistry/SKILL.md +3 -2
- package/skills/domains/chemistry/catalysis-hub-api/SKILL.md +171 -0
- package/skills/domains/chemistry/molecular-dynamics-guide/SKILL.md +1 -1
- package/skills/domains/chemistry/retrosynthesis-guide/SKILL.md +1 -1
- package/skills/domains/chemistry/spectroscopy-analysis-guide/SKILL.md +1 -1
- package/skills/domains/cs/SKILL.md +1 -1
- package/skills/domains/cs/algorithms-complexity-guide/SKILL.md +1 -1
- package/skills/domains/cs/distributed-systems-guide/SKILL.md +1 -1
- package/skills/domains/cs/formal-verification-guide/SKILL.md +1 -1
- package/skills/domains/cs/software-engineering-research/SKILL.md +1 -1
- package/skills/domains/ecology/SKILL.md +1 -1
- package/skills/domains/ecology/biodiversity-data-guide/SKILL.md +1 -1
- package/skills/domains/ecology/conservation-biology-guide/SKILL.md +1 -1
- package/skills/domains/ecology/species-distribution-guide/SKILL.md +1 -1
- package/skills/domains/economics/SKILL.md +1 -1
- package/skills/domains/economics/behavioral-economics-guide/SKILL.md +1 -1
- package/skills/domains/economics/development-economics-guide/SKILL.md +1 -1
- package/skills/domains/education/SKILL.md +2 -3
- package/skills/domains/education/assessment-design-guide/SKILL.md +1 -1
- package/skills/domains/education/curriculum-design-guide/SKILL.md +1 -1
- package/skills/domains/education/educational-research-methods/SKILL.md +1 -1
- package/skills/domains/education/learning-science-guide/SKILL.md +1 -1
- package/skills/domains/education/mooc-analytics-guide/SKILL.md +1 -1
- package/skills/domains/finance/SKILL.md +1 -1
- package/skills/domains/finance/financial-data-analysis/SKILL.md +1 -1
- package/skills/domains/finance/portfolio-optimization-guide/SKILL.md +1 -1
- package/skills/domains/finance/quantitative-finance-guide/SKILL.md +1 -1
- package/skills/domains/finance/risk-modeling-guide/SKILL.md +1 -1
- package/skills/domains/geoscience/SKILL.md +1 -1
- package/skills/domains/geoscience/climate-modeling-guide/SKILL.md +1 -1
- package/skills/domains/geoscience/climate-science-guide/SKILL.md +1 -1
- package/skills/domains/geoscience/gis-remote-sensing-guide/SKILL.md +1 -1
- package/skills/domains/geoscience/satellite-remote-sensing/SKILL.md +1 -1
- package/skills/domains/geoscience/seismology-data-guide/SKILL.md +1 -1
- package/skills/domains/humanities/SKILL.md +1 -1
- package/skills/domains/humanities/digital-humanities-guide/SKILL.md +1 -1
- package/skills/domains/humanities/ethical-philosophy-guide/SKILL.md +1 -1
- package/skills/domains/humanities/philosophy-research-guide/SKILL.md +1 -1
- package/skills/domains/law/SKILL.md +3 -2
- package/skills/domains/law/legal-nlp-guide/SKILL.md +1 -1
- package/skills/domains/law/legal-research-guide/SKILL.md +1 -1
- package/skills/domains/law/patent-analysis-guide/SKILL.md +1 -1
- package/skills/domains/law/regulatory-compliance-guide/SKILL.md +1 -1
- package/skills/domains/law/uk-legislation-api/SKILL.md +179 -0
- package/skills/domains/math/SKILL.md +1 -1
- package/skills/domains/math/numerical-methods-guide/SKILL.md +1 -1
- package/skills/domains/math/symbolic-computation-guide/SKILL.md +1 -1
- package/skills/domains/math/topology-data-analysis/SKILL.md +1 -1
- package/skills/domains/pharma/SKILL.md +1 -1
- package/skills/domains/pharma/clinical-pharmacology-guide/SKILL.md +1 -1
- package/skills/domains/pharma/clinical-trial-design-guide/SKILL.md +1 -1
- package/skills/domains/pharma/drug-development-guide/SKILL.md +1 -1
- package/skills/domains/pharma/drug-target-interaction/SKILL.md +1 -1
- package/skills/domains/pharma/pharmacovigilance-guide/SKILL.md +1 -1
- package/skills/domains/physics/SKILL.md +1 -1
- package/skills/domains/physics/astrophysics-data-guide/SKILL.md +1 -1
- package/skills/domains/physics/computational-physics-guide/SKILL.md +1 -1
- package/skills/domains/physics/particle-physics-guide/SKILL.md +1 -1
- package/skills/domains/physics/quantum-computing-guide/SKILL.md +1 -1
- package/skills/domains/social-science/SKILL.md +1 -1
- package/skills/domains/social-science/network-analysis-guide/SKILL.md +1 -1
- package/skills/domains/social-science/social-research-methods/SKILL.md +1 -1
- package/skills/domains/social-science/survey-research-guide/SKILL.md +1 -1
- package/skills/literature/discovery/SKILL.md +1 -1
- package/skills/literature/discovery/citation-alert-guide/SKILL.md +1 -1
- package/skills/literature/discovery/conference-proceedings-guide/SKILL.md +1 -1
- package/skills/literature/discovery/literature-mapping-guide/SKILL.md +1 -1
- package/skills/literature/discovery/rss-paper-feeds/SKILL.md +1 -1
- package/skills/literature/discovery/semantic-scholar-recs-guide/SKILL.md +1 -1
- package/skills/literature/discovery/zotero-arxiv-daily-guide/SKILL.md +3 -3
- package/skills/literature/fulltext/SKILL.md +3 -2
- package/skills/literature/fulltext/arxiv-latex-source/SKILL.md +195 -0
- package/skills/literature/fulltext/interlibrary-loan-guide/SKILL.md +1 -1
- package/skills/literature/fulltext/open-access-guide/SKILL.md +1 -1
- package/skills/literature/fulltext/open-access-mining-guide/SKILL.md +1 -1
- package/skills/literature/fulltext/preprint-servers-guide/SKILL.md +1 -1
- package/skills/literature/metadata/SKILL.md +1 -1
- package/skills/literature/metadata/altmetrics-guide/SKILL.md +1 -1
- package/skills/literature/metadata/doi-resolution-guide/SKILL.md +1 -1
- package/skills/literature/metadata/h-index-guide/SKILL.md +1 -1
- package/skills/literature/metadata/journal-metrics-guide/SKILL.md +1 -1
- package/skills/literature/metadata/orcid-integration-guide/SKILL.md +1 -1
- package/skills/literature/search/SKILL.md +2 -3
- package/skills/literature/search/arxiv-batch-reporting/SKILL.md +2 -2
- package/skills/literature/search/boolean-search-guide/SKILL.md +1 -1
- package/skills/literature/search/citation-chaining-guide/SKILL.md +1 -1
- package/skills/literature/search/database-comparison-guide/SKILL.md +1 -1
- package/skills/literature/search/deep-literature-search/SKILL.md +2 -2
- package/skills/literature/search/google-scholar-guide/SKILL.md +1 -1
- package/skills/literature/search/mesh-terms-guide/SKILL.md +1 -1
- package/skills/literature/search/systematic-search-strategy/SKILL.md +1 -1
- package/skills/research/automation/SKILL.md +1 -1
- package/skills/research/automation/data-collection-automation/SKILL.md +1 -1
- package/skills/research/automation/datagen-research-guide/SKILL.md +1 -0
- package/skills/research/automation/mle-agent-guide/SKILL.md +1 -0
- package/skills/research/automation/paper-to-agent-guide/SKILL.md +1 -0
- package/skills/research/automation/research-workflow-automation/SKILL.md +1 -1
- package/skills/research/deep-research/SKILL.md +1 -1
- package/skills/research/deep-research/auto-deep-research-guide/SKILL.md +1 -0
- package/skills/research/deep-research/meta-synthesis-guide/SKILL.md +1 -1
- package/skills/research/deep-research/scoping-review-guide/SKILL.md +1 -1
- package/skills/research/deep-research/systematic-review-guide/SKILL.md +1 -1
- package/skills/research/funding/SKILL.md +1 -1
- package/skills/research/funding/eu-horizon-guide/SKILL.md +1 -1
- package/skills/research/funding/grant-budget-guide/SKILL.md +1 -1
- package/skills/research/funding/grant-writing-guide/SKILL.md +1 -1
- package/skills/research/funding/nsf-grant-guide/SKILL.md +1 -1
- package/skills/research/funding/open-science-guide/SKILL.md +1 -1
- package/skills/research/methodology/SKILL.md +2 -2
- package/skills/research/methodology/action-research-guide/SKILL.md +1 -1
- package/skills/research/methodology/claude-scientific-guide/SKILL.md +1 -0
- package/skills/research/methodology/experimental-design-guide/SKILL.md +1 -1
- package/skills/research/methodology/grounded-theory-guide/SKILL.md +1 -1
- package/skills/research/methodology/mixed-methods-guide/SKILL.md +1 -1
- package/skills/research/methodology/qualitative-research-guide/SKILL.md +2 -2
- package/skills/research/methodology/research-paper-kb/SKILL.md +2 -2
- package/skills/research/methodology/research-town-guide/SKILL.md +3 -3
- package/skills/research/methodology/scientify-idea-generation/SKILL.md +1 -1
- package/skills/research/paper-review/SKILL.md +2 -2
- package/skills/research/paper-review/automated-review-guide/SKILL.md +1 -1
- package/skills/research/paper-review/paper-reading-assistant/SKILL.md +1 -1
- package/skills/research/paper-review/peer-review-guide/SKILL.md +2 -2
- package/skills/research/paper-review/rebuttal-writing-guide/SKILL.md +1 -1
- package/skills/research/paper-review/review-response-guide/SKILL.md +1 -1
- package/skills/research/paper-review/scientify-write-review-paper/SKILL.md +1 -1
- package/skills/tools/code-exec/SKILL.md +1 -1
- package/skills/tools/code-exec/google-colab-guide/SKILL.md +1 -1
- package/skills/tools/code-exec/jupyter-notebook-guide/SKILL.md +1 -1
- package/skills/tools/code-exec/overleaf-cli-guide/SKILL.md +1 -1
- package/skills/tools/code-exec/python-reproducibility-guide/SKILL.md +1 -1
- package/skills/tools/code-exec/r-reproducibility-guide/SKILL.md +1 -1
- package/skills/tools/code-exec/sandbox-execution-guide/SKILL.md +1 -1
- package/skills/tools/diagram/SKILL.md +1 -1
- package/skills/tools/diagram/code-flow-visualizer/SKILL.md +1 -1
- package/skills/tools/diagram/excalidraw-diagram-guide/SKILL.md +1 -1
- package/skills/tools/diagram/mermaid-architect-guide/SKILL.md +1 -1
- package/skills/tools/diagram/plantuml-guide/SKILL.md +1 -1
- package/skills/tools/diagram/scientific-illustration-guide/SKILL.md +1 -1
- package/skills/tools/document/SKILL.md +1 -1
- package/skills/tools/document/large-document-reader/SKILL.md +2 -2
- package/skills/tools/document/markdown-academic-guide/SKILL.md +1 -1
- package/skills/tools/document/paper-parse-guide/SKILL.md +2 -2
- package/skills/tools/document/pdf-extraction-guide/SKILL.md +1 -1
- package/skills/tools/knowledge-graph/SKILL.md +2 -3
- package/skills/tools/knowledge-graph/citation-network-builder/SKILL.md +1 -1
- package/skills/tools/knowledge-graph/concept-map-generator/SKILL.md +1 -1
- package/skills/tools/knowledge-graph/ontology-design-guide/SKILL.md +1 -1
- package/skills/tools/knowledge-graph/rag-methodology-guide/SKILL.md +1 -1
- package/skills/tools/ocr-translate/SKILL.md +1 -1
- package/skills/tools/ocr-translate/handwriting-recognition-guide/SKILL.md +1 -1
- package/skills/tools/ocr-translate/latex-ocr-guide/SKILL.md +1 -1
- package/skills/tools/ocr-translate/multilingual-research-guide/SKILL.md +1 -1
- package/skills/tools/ocr-translate/zotero-pdf2zh-guide/SKILL.md +1 -0
- package/skills/tools/scraping/SKILL.md +1 -1
- package/skills/tools/scraping/dataset-finder-guide/SKILL.md +2 -2
- package/skills/tools/scraping/google-scholar-scraper/SKILL.md +1 -1
- package/skills/tools/scraping/repository-harvesting-guide/SKILL.md +1 -1
- package/skills/tools/scraping/web-scraping-ethics-guide/SKILL.md +1 -1
- package/skills/writing/citation/SKILL.md +1 -1
- package/skills/writing/citation/academic-citation-manager/SKILL.md +2 -2
- package/skills/writing/citation/bibtex-management-guide/SKILL.md +1 -1
- package/skills/writing/citation/citation-style-guide/SKILL.md +1 -1
- package/skills/writing/citation/mendeley-api/SKILL.md +2 -2
- package/skills/writing/citation/obsidian-citation-guide/SKILL.md +1 -0
- package/skills/writing/citation/obsidian-zotero-guide/SKILL.md +1 -0
- package/skills/writing/citation/papersgpt-zotero-guide/SKILL.md +1 -0
- package/skills/writing/citation/reference-manager-comparison/SKILL.md +1 -1
- package/skills/writing/citation/zotero-mdnotes-guide/SKILL.md +1 -0
- package/skills/writing/citation/zotero-reference-guide/SKILL.md +1 -0
- package/skills/writing/composition/SKILL.md +1 -1
- package/skills/writing/composition/abstract-writing-guide/SKILL.md +1 -1
- package/skills/writing/composition/discussion-writing-guide/SKILL.md +1 -1
- package/skills/writing/composition/introduction-writing-guide/SKILL.md +1 -1
- package/skills/writing/composition/literature-review-writing/SKILL.md +1 -1
- package/skills/writing/composition/methods-section-guide/SKILL.md +1 -1
- package/skills/writing/composition/response-to-reviewers/SKILL.md +1 -1
- package/skills/writing/composition/scientific-writing-resources/SKILL.md +1 -0
- package/skills/writing/latex/SKILL.md +1 -1
- package/skills/writing/latex/bibliography-management-guide/SKILL.md +1 -1
- package/skills/writing/latex/latex-drawing-collection/SKILL.md +1 -0
- package/skills/writing/latex/latex-templates-collection/SKILL.md +1 -0
- package/skills/writing/latex/math-typesetting-guide/SKILL.md +1 -1
- package/skills/writing/latex/overleaf-collaboration-guide/SKILL.md +1 -1
- package/skills/writing/latex/tex-render-guide/SKILL.md +2 -2
- package/skills/writing/latex/tikz-diagrams-guide/SKILL.md +1 -1
- package/skills/writing/polish/SKILL.md +1 -1
- package/skills/writing/polish/academic-tone-guide/SKILL.md +1 -1
- package/skills/writing/polish/academic-translation-guide/SKILL.md +1 -1
- package/skills/writing/polish/ai-writing-humanizer/SKILL.md +1 -1
- package/skills/writing/polish/conciseness-editing-guide/SKILL.md +1 -1
- package/skills/writing/polish/grammar-checker-guide/SKILL.md +1 -1
- package/skills/writing/polish/paper-polish-guide/SKILL.md +2 -2
- package/skills/writing/polish/plagiarism-detection-guide/SKILL.md +1 -1
- package/skills/writing/templates/SKILL.md +1 -1
- package/skills/writing/templates/beamer-presentation-guide/SKILL.md +1 -1
- package/skills/writing/templates/conference-paper-template/SKILL.md +1 -1
- package/skills/writing/templates/novathesis-guide/SKILL.md +1 -0
- package/skills/writing/templates/thesis-template-guide/SKILL.md +1 -1
- package/src/tools/arxiv.ts +78 -30
- package/src/tools/biorxiv.ts +142 -0
- package/src/tools/crossref.ts +60 -22
- package/src/tools/datacite.ts +188 -0
- package/src/tools/dblp.ts +125 -0
- package/src/tools/doaj.ts +82 -0
- package/src/tools/europe-pmc.ts +159 -0
- package/src/tools/hal.ts +118 -0
- package/src/tools/inspire-hep.ts +165 -0
- package/src/tools/openaire.ts +158 -0
- package/src/tools/openalex.ts +20 -15
- package/src/tools/opencitations.ts +103 -0
- package/src/tools/orcid.ts +136 -0
- package/src/tools/osf-preprints.ts +104 -0
- package/src/tools/pubmed.ts +19 -13
- package/src/tools/ror.ts +118 -0
- package/src/tools/unpaywall.ts +12 -6
- package/src/tools/util.ts +141 -0
- package/src/tools/zenodo.ts +154 -0
- package/mcp-configs/academic-db/ChatSpatial.json +0 -17
- package/mcp-configs/academic-db/academia-mcp.json +0 -17
- package/mcp-configs/academic-db/academic-paper-explorer.json +0 -17
- package/mcp-configs/academic-db/academic-search-mcp-server.json +0 -17
- package/mcp-configs/academic-db/agentinterviews-mcp.json +0 -17
- package/mcp-configs/academic-db/all-in-mcp.json +0 -17
- package/mcp-configs/academic-db/alphafold-mcp.json +0 -20
- package/mcp-configs/academic-db/apple-health-mcp.json +0 -17
- package/mcp-configs/academic-db/arxiv-latex-mcp.json +0 -17
- package/mcp-configs/academic-db/arxiv-mcp-server.json +0 -17
- package/mcp-configs/academic-db/bgpt-mcp.json +0 -17
- package/mcp-configs/academic-db/biomcp.json +0 -17
- package/mcp-configs/academic-db/biothings-mcp.json +0 -17
- package/mcp-configs/academic-db/brightspace-mcp.json +0 -21
- package/mcp-configs/academic-db/catalysishub-mcp-server.json +0 -17
- package/mcp-configs/academic-db/climatiq-mcp.json +0 -20
- package/mcp-configs/academic-db/clinicaltrialsgov-mcp-server.json +0 -17
- package/mcp-configs/academic-db/deep-research-mcp.json +0 -17
- package/mcp-configs/academic-db/dicom-mcp.json +0 -17
- package/mcp-configs/academic-db/enrichr-mcp-server.json +0 -17
- package/mcp-configs/academic-db/fec-mcp-server.json +0 -17
- package/mcp-configs/academic-db/fhir-mcp-server-themomentum.json +0 -17
- package/mcp-configs/academic-db/fhir-mcp.json +0 -19
- package/mcp-configs/academic-db/gget-mcp.json +0 -17
- package/mcp-configs/academic-db/gibs-mcp.json +0 -20
- package/mcp-configs/academic-db/gis-mcp-server.json +0 -22
- package/mcp-configs/academic-db/google-earth-engine-mcp.json +0 -21
- package/mcp-configs/academic-db/google-researcher-mcp.json +0 -17
- package/mcp-configs/academic-db/idea-reality-mcp.json +0 -17
- package/mcp-configs/academic-db/legiscan-mcp.json +0 -19
- package/mcp-configs/academic-db/lex.json +0 -17
- package/mcp-configs/academic-db/m4-clinical-mcp.json +0 -21
- package/mcp-configs/academic-db/medical-mcp.json +0 -21
- package/mcp-configs/academic-db/nexonco-mcp.json +0 -20
- package/mcp-configs/academic-db/omop-mcp.json +0 -20
- package/mcp-configs/academic-db/onekgpd-mcp.json +0 -20
- package/mcp-configs/academic-db/openedu-mcp.json +0 -20
- package/mcp-configs/academic-db/opengenes-mcp.json +0 -20
- package/mcp-configs/academic-db/openstax-mcp.json +0 -21
- package/mcp-configs/academic-db/openstreetmap-mcp.json +0 -21
- package/mcp-configs/academic-db/opentargets-mcp.json +0 -21
- package/mcp-configs/academic-db/pdb-mcp.json +0 -21
- package/mcp-configs/academic-db/smithsonian-mcp.json +0 -20
- package/mcp-configs/ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json +0 -17
- package/mcp-configs/ai-platform/ai-counsel.json +0 -17
- package/mcp-configs/ai-platform/atlas-mcp-server.json +0 -17
- package/mcp-configs/ai-platform/counsel-mcp.json +0 -17
- package/mcp-configs/ai-platform/cross-llm-mcp.json +0 -17
- package/mcp-configs/ai-platform/gptr-mcp.json +0 -17
- package/mcp-configs/ai-platform/magi-researchers.json +0 -21
- package/mcp-configs/ai-platform/mcp-academic-researcher.json +0 -22
- package/mcp-configs/ai-platform/open-paper-machine.json +0 -21
- package/mcp-configs/ai-platform/paper-intelligence.json +0 -21
- package/mcp-configs/ai-platform/paper-reader.json +0 -21
- package/mcp-configs/ai-platform/paperdebugger.json +0 -21
- package/mcp-configs/browser/decipher-research-agent.json +0 -17
- package/mcp-configs/browser/deep-research.json +0 -17
- package/mcp-configs/browser/everything-claude-code.json +0 -17
- package/mcp-configs/browser/exa-mcp.json +0 -20
- package/mcp-configs/browser/gpt-researcher.json +0 -17
- package/mcp-configs/browser/heurist-agent-framework.json +0 -17
- package/mcp-configs/browser/mcp-searxng.json +0 -21
- package/mcp-configs/browser/mcp-webresearch.json +0 -20
- package/mcp-configs/cloud-docs/confluence-mcp.json +0 -37
- package/mcp-configs/cloud-docs/google-drive-mcp.json +0 -35
- package/mcp-configs/cloud-docs/notion-mcp.json +0 -29
- package/mcp-configs/communication/discord-mcp.json +0 -29
- package/mcp-configs/communication/discourse-mcp.json +0 -21
- package/mcp-configs/communication/slack-mcp.json +0 -29
- package/mcp-configs/communication/telegram-mcp.json +0 -28
- package/mcp-configs/data-platform/4everland-hosting-mcp.json +0 -17
- package/mcp-configs/data-platform/automl-stat-mcp.json +0 -21
- package/mcp-configs/data-platform/context-keeper.json +0 -17
- package/mcp-configs/data-platform/context7.json +0 -19
- package/mcp-configs/data-platform/contextstream-mcp.json +0 -17
- package/mcp-configs/data-platform/email-mcp.json +0 -17
- package/mcp-configs/data-platform/jefferson-stats-mcp.json +0 -22
- package/mcp-configs/data-platform/mcp-excel-server.json +0 -21
- package/mcp-configs/data-platform/mcp-stata.json +0 -21
- package/mcp-configs/data-platform/mcpstack-jupyter.json +0 -21
- package/mcp-configs/data-platform/ml-mcp.json +0 -21
- package/mcp-configs/data-platform/nasdaq-data-link-mcp.json +0 -20
- package/mcp-configs/data-platform/numpy-mcp.json +0 -21
- package/mcp-configs/database/neo4j-mcp.json +0 -37
- package/mcp-configs/database/postgres-mcp.json +0 -28
- package/mcp-configs/database/sqlite-mcp.json +0 -29
- package/mcp-configs/dev-platform/geogebra-mcp.json +0 -21
- package/mcp-configs/dev-platform/github-mcp.json +0 -31
- package/mcp-configs/dev-platform/gitlab-mcp.json +0 -34
- package/mcp-configs/dev-platform/latex-mcp-server.json +0 -21
- package/mcp-configs/dev-platform/manim-mcp.json +0 -20
- package/mcp-configs/dev-platform/mcp-echarts.json +0 -20
- package/mcp-configs/dev-platform/panel-viz-mcp.json +0 -20
- package/mcp-configs/dev-platform/paperbanana.json +0 -20
- package/mcp-configs/dev-platform/texflow-mcp.json +0 -20
- package/mcp-configs/dev-platform/texmcp.json +0 -20
- package/mcp-configs/dev-platform/typst-mcp.json +0 -21
- package/mcp-configs/dev-platform/vizro-mcp.json +0 -20
- package/mcp-configs/email/email-mcp.json +0 -40
- package/mcp-configs/email/gmail-mcp.json +0 -37
- package/mcp-configs/note-knowledge/ApeRAG.json +0 -17
- package/mcp-configs/note-knowledge/In-Memoria.json +0 -17
- package/mcp-configs/note-knowledge/agent-memory.json +0 -17
- package/mcp-configs/note-knowledge/aimemo.json +0 -17
- package/mcp-configs/note-knowledge/biel-mcp.json +0 -19
- package/mcp-configs/note-knowledge/cognee.json +0 -17
- package/mcp-configs/note-knowledge/context-awesome.json +0 -17
- package/mcp-configs/note-knowledge/context-mcp.json +0 -17
- package/mcp-configs/note-knowledge/conversation-handoff-mcp.json +0 -17
- package/mcp-configs/note-knowledge/cortex.json +0 -17
- package/mcp-configs/note-knowledge/devrag.json +0 -17
- package/mcp-configs/note-knowledge/easy-obsidian-mcp.json +0 -17
- package/mcp-configs/note-knowledge/engram.json +0 -17
- package/mcp-configs/note-knowledge/gnosis-mcp.json +0 -17
- package/mcp-configs/note-knowledge/graphlit-mcp-server.json +0 -19
- package/mcp-configs/note-knowledge/local-faiss-mcp.json +0 -21
- package/mcp-configs/note-knowledge/mcp-memory-service.json +0 -21
- package/mcp-configs/note-knowledge/mcp-obsidian.json +0 -23
- package/mcp-configs/note-knowledge/mcp-ragdocs.json +0 -20
- package/mcp-configs/note-knowledge/mcp-summarizer.json +0 -21
- package/mcp-configs/note-knowledge/mediawiki-mcp.json +0 -21
- package/mcp-configs/note-knowledge/openzim-mcp.json +0 -20
- package/mcp-configs/note-knowledge/zettelkasten-mcp.json +0 -21
- package/mcp-configs/reference-mgr/academic-paper-mcp-http.json +0 -20
- package/mcp-configs/reference-mgr/academix.json +0 -20
- package/mcp-configs/reference-mgr/arxiv-cli.json +0 -17
- package/mcp-configs/reference-mgr/arxiv-research-mcp.json +0 -21
- package/mcp-configs/reference-mgr/arxiv-search-mcp.json +0 -17
- package/mcp-configs/reference-mgr/chiken.json +0 -17
- package/mcp-configs/reference-mgr/claude-scholar.json +0 -17
- package/mcp-configs/reference-mgr/devonthink-mcp.json +0 -17
- package/mcp-configs/reference-mgr/google-scholar-abstract-mcp.json +0 -19
- package/mcp-configs/reference-mgr/google-scholar-mcp.json +0 -20
- package/mcp-configs/reference-mgr/mcp-paperswithcode.json +0 -21
- package/mcp-configs/reference-mgr/mcp-scholarly.json +0 -20
- package/mcp-configs/reference-mgr/mcp-simple-arxiv.json +0 -20
- package/mcp-configs/reference-mgr/mcp-simple-pubmed.json +0 -20
- package/mcp-configs/reference-mgr/mcp-zotero.json +0 -21
- package/mcp-configs/reference-mgr/mendeley-mcp.json +0 -20
- package/mcp-configs/reference-mgr/ncbi-mcp-server.json +0 -22
- package/mcp-configs/reference-mgr/onecite.json +0 -21
- package/mcp-configs/reference-mgr/paper-search-mcp.json +0 -21
- package/mcp-configs/reference-mgr/pubmed-search-mcp.json +0 -21
- package/mcp-configs/reference-mgr/scholar-mcp.json +0 -21
- package/mcp-configs/reference-mgr/scholar-multi-mcp.json +0 -21
- package/mcp-configs/reference-mgr/seerai.json +0 -21
- package/mcp-configs/reference-mgr/semantic-scholar-fastmcp.json +0 -21
- package/mcp-configs/reference-mgr/sourcelibrary.json +0 -20
- package/mcp-configs/registry.json +0 -476
- package/mcp-configs/repository/dataverse-mcp.json +0 -33
- package/mcp-configs/repository/huggingface-mcp.json +0 -29
- package/skills/domains/business/xpert-bi-guide/SKILL.md +0 -84
- package/skills/domains/education/edumcp-guide/SKILL.md +0 -74
- package/skills/literature/search/paper-search-mcp-guide/SKILL.md +0 -107
- package/skills/tools/knowledge-graph/paperpile-notion-guide/SKILL.md +0 -84
- package/src/tools/semantic-scholar.ts +0 -112
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## Overview
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arXiv stores the original LaTeX source files for the vast majority of its 2.4 million+ preprints. Accessing LaTeX source provides major advantages over PDF parsing: exact mathematical notation as written by the author, structured sections and labels, machine-readable bibliography entries, and intact figure captions, table data, and cross-references.
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For formula extraction, citation graph construction, section-level text analysis, or training data curation for scientific language models, LaTeX source is the gold standard. PDF parsing introduces OCR errors in equations, loses structural hierarchy, and mangles complex tables.
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The e-print endpoint serves source bundles as gzip-compressed tarballs (`.tar.gz`) containing `.tex` files, figures, `.bib`/`.bbl` bibliography files, style files, and supplementary materials. No authentication is required.
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### Download LaTeX Source
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# Download source archive (response: 200, application/gzip, ~1.3 MB)
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# List archive contents
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- **Content-Disposition header**: `attachment; filename="arXiv-2301.00001v1.tar.gz"`
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### Format Detection
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### Metadata API (Companion)
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Pair source downloads with the arXiv Atom API for structured metadata:
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- **URL**: `GET https://export.arxiv.org/api/query?id_list={arxiv_id}`
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## LaTeX Source Parsing Guide
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### Locating the Main .tex File
|
|
75
|
+
|
|
76
|
+
A source archive typically contains multiple files. To find the main document:
|
|
77
|
+
|
|
78
|
+
1. Look for `\documentclass` in `.tex` files — this marks the root document
|
|
79
|
+
2. Check for a `README.txt` that may specify the main file
|
|
80
|
+
3. If multiple `.tex` files contain `\documentclass`, prefer the one with `\begin{document}`
|
|
81
|
+
|
|
82
|
+
```python
|
|
83
|
+
import tarfile, re
|
|
84
|
+
|
|
85
|
+
def find_main_tex(tar_path):
|
|
86
|
+
with tarfile.open(tar_path, 'r:gz') as tar:
|
|
87
|
+
tex_files = [m for m in tar.getmembers() if m.name.endswith('.tex')]
|
|
88
|
+
for member in tex_files:
|
|
89
|
+
content = tar.extractfile(member).read().decode('utf-8', errors='ignore')
|
|
90
|
+
if r'\documentclass' in content and r'\begin{document}' in content:
|
|
91
|
+
return member.name, content
|
|
92
|
+
return None, None
|
|
93
|
+
```
|
|
94
|
+
|
|
95
|
+
### Extracting Sections
|
|
96
|
+
|
|
97
|
+
LaTeX sections follow a predictable hierarchy:
|
|
98
|
+
|
|
99
|
+
```python
|
|
100
|
+
import re
|
|
101
|
+
|
|
102
|
+
def extract_sections(tex_content):
|
|
103
|
+
pattern = r'\\(section|subsection|subsubsection)\{([^}]+)\}'
|
|
104
|
+
sections = re.findall(pattern, tex_content)
|
|
105
|
+
return [(level, title) for level, title in sections]
|
|
106
|
+
# [('section', 'Introduction'), ('section', 'Related Work'), ...]
|
|
107
|
+
```
|
|
108
|
+
|
|
109
|
+
### Extracting Equations
|
|
110
|
+
|
|
111
|
+
```python
|
|
112
|
+
def extract_equations(tex_content):
|
|
113
|
+
patterns = [
|
|
114
|
+
r'\\\[(.+?)\\\]',
|
|
115
|
+
r'\\begin\{equation\}(.+?)\\end\{equation\}',
|
|
116
|
+
r'\\begin\{align\*?\}(.+?)\\end\{align\*?\}',
|
|
117
|
+
]
|
|
118
|
+
equations = []
|
|
119
|
+
for pat in patterns:
|
|
120
|
+
equations.extend(re.findall(pat, tex_content, re.DOTALL))
|
|
121
|
+
return equations
|
|
122
|
+
```
|
|
123
|
+
|
|
124
|
+
### Extracting Bibliography
|
|
125
|
+
|
|
126
|
+
Parse `.bib` files (BibTeX entries) or `.bbl` files (compiled `\bibitem` commands):
|
|
127
|
+
|
|
128
|
+
```python
|
|
129
|
+
def extract_bibliography(tar_path):
|
|
130
|
+
refs = []
|
|
131
|
+
with tarfile.open(tar_path, 'r:gz') as tar:
|
|
132
|
+
for member in tar.getmembers():
|
|
133
|
+
if member.name.endswith('.bib'):
|
|
134
|
+
content = tar.extractfile(member).read().decode('utf-8', errors='ignore')
|
|
135
|
+
refs.extend(re.findall(r'@\w+\{([^,]+),(.+?)\n\}', content, re.DOTALL))
|
|
136
|
+
elif member.name.endswith('.bbl'):
|
|
137
|
+
content = tar.extractfile(member).read().decode('utf-8', errors='ignore')
|
|
138
|
+
refs.extend(re.findall(r'\\bibitem.*?\{(.+?)\}', content))
|
|
139
|
+
return refs
|
|
140
|
+
```
|
|
141
|
+
|
|
142
|
+
## Rate Limits
|
|
143
|
+
|
|
144
|
+
- **Maximum**: 4 requests per second for automated access
|
|
145
|
+
- **Recommended**: 1 request/second with delays between sequential downloads
|
|
146
|
+
- **Bulk access**: For 1000+ papers, use the arXiv S3 bulk data mirror instead
|
|
147
|
+
- **HTTP 429**: Rate limit exceeded; implement exponential backoff
|
|
148
|
+
- **User-Agent**: Required — set a descriptive string: `MyTool/1.0 (mailto:user@university.edu)`
|
|
149
|
+
- Persistent abuse may result in IP-level blocks
|
|
150
|
+
|
|
151
|
+
## Academic Use Cases
|
|
152
|
+
|
|
153
|
+
- **Formula extraction for ML training** — Build equation datasets with ground-truth LaTeX notation, free of OCR noise from PDF parsing
|
|
154
|
+
- **Citation network analysis** — Parse `.bib`/`.bbl` files for exact reference keys to construct citation graphs
|
|
155
|
+
- **Section-level text analysis** — Extract specific sections (e.g., all "Related Work" across a subfield) for systematic reviews
|
|
156
|
+
- **Reproducibility auditing** — Examine algorithm environments, hyperparameter tables, and methodology sections
|
|
157
|
+
- **Cross-paper notation alignment** — Compare and normalize equation environments across papers in a subfield
|
|
158
|
+
|
|
159
|
+
## Complete Python Example
|
|
160
|
+
|
|
161
|
+
```python
|
|
162
|
+
import requests, tarfile, io, re, time, gzip
|
|
163
|
+
|
|
164
|
+
def download_arxiv_source(arxiv_id, delay=1.0):
|
|
165
|
+
"""Download and extract all .tex files from an arXiv paper's source."""
|
|
166
|
+
url = f"https://arxiv.org/e-print/{arxiv_id}"
|
|
167
|
+
headers = {"User-Agent": "ResearchTool/1.0 (mailto:user@example.com)"}
|
|
168
|
+
resp = requests.get(url, headers=headers)
|
|
169
|
+
resp.raise_for_status()
|
|
170
|
+
time.sleep(delay)
|
|
171
|
+
|
|
172
|
+
buf = io.BytesIO(resp.content)
|
|
173
|
+
try:
|
|
174
|
+
with tarfile.open(fileobj=buf, mode='r:gz') as tar:
|
|
175
|
+
return {m.name: tar.extractfile(m).read().decode('utf-8', errors='ignore')
|
|
176
|
+
for m in tar.getmembers() if m.name.endswith('.tex') and m.isfile()}
|
|
177
|
+
except tarfile.ReadError:
|
|
178
|
+
buf.seek(0)
|
|
179
|
+
return {"main.tex": gzip.decompress(buf.read()).decode('utf-8', errors='ignore')}
|
|
180
|
+
|
|
181
|
+
# Usage
|
|
182
|
+
sources = download_arxiv_source("2301.00001")
|
|
183
|
+
for fname, content in sources.items():
|
|
184
|
+
if r'\documentclass' in content:
|
|
185
|
+
sections = re.findall(r'\\section\{([^}]+)\}', content)
|
|
186
|
+
equations = re.findall(r'\\begin\{equation\}(.+?)\\end\{equation\}', content, re.DOTALL)
|
|
187
|
+
print(f"{fname}: {len(sections)} sections, {len(equations)} equations")
|
|
188
|
+
```
|
|
189
|
+
|
|
190
|
+
## References
|
|
191
|
+
|
|
192
|
+
- arXiv e-print access: https://info.arxiv.org/help/bulk_data_s3.html
|
|
193
|
+
- arXiv API documentation: https://info.arxiv.org/help/api/index.html
|
|
194
|
+
- arXiv terms of use: https://info.arxiv.org/help/api/tou.html
|
|
195
|
+
- arXiv S3 bulk data: https://info.arxiv.org/help/bulk_data_s3.html
|
|
@@ -3,7 +3,7 @@ name: interlibrary-loan-guide
|
|
|
3
3
|
description: "Access papers through interlibrary loan and document delivery services"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "📚"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "fulltext"
|
|
9
9
|
keywords: ["interlibrary loan", "ILL", "document delivery", "full text access", "library services"]
|
|
@@ -3,7 +3,7 @@ name: open-access-guide
|
|
|
3
3
|
description: "Navigate open access policies, repositories, and legal full-text retrieval me..."
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔓"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "fulltext"
|
|
9
9
|
keywords: ["open access", "full-text retrieval", "journal copyright policy", "self-archiving", "open access rights"]
|
|
@@ -3,7 +3,7 @@ name: open-access-mining-guide
|
|
|
3
3
|
description: "Mine open access full-text repositories for research data extraction"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔓"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "fulltext"
|
|
9
9
|
keywords: ["open access", "text mining", "full text", "PubMed Central", "CORE", "content mining", "TDM"]
|
|
@@ -3,7 +3,7 @@ name: preprint-servers-guide
|
|
|
3
3
|
description: "Guide to preprint servers across scientific disciplines"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "📄"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "fulltext"
|
|
9
9
|
keywords: ["preprint server", "preprint submission", "arXiv", "bioRxiv", "open access"]
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
---
|
|
2
2
|
name: metadata-skills
|
|
3
|
-
description: "24 metadata & bibliometrics skills
|
|
3
|
+
description: "24 metadata & bibliometrics skills. Trigger: DOI resolution, citation metrics, author disambiguation, bibliometrics. Design: metadata APIs and bibliometric analysis tools for scholarly records."
|
|
4
4
|
---
|
|
5
5
|
|
|
6
6
|
# Metadata & Bibliometrics — 24 Skills
|
|
@@ -3,7 +3,7 @@ name: altmetrics-guide
|
|
|
3
3
|
description: "Guide to altmetrics and research impact beyond traditional citations"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "📊"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "metadata"
|
|
9
9
|
keywords: ["altmetrics", "attention score", "social impact", "online mentions", "academic metrics"]
|
|
@@ -3,7 +3,7 @@ name: doi-resolution-guide
|
|
|
3
3
|
description: "DOI content negotiation and metadata retrieval techniques"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔗"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "metadata"
|
|
9
9
|
keywords: ["DOI resolution", "digital object identifier", "citation statistics"]
|
|
@@ -3,7 +3,7 @@ name: h-index-guide
|
|
|
3
3
|
description: "Understanding and calculating research impact metrics"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🏅"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "metadata"
|
|
9
9
|
keywords: ["h-index", "impact factor", "bibliometrics", "academic metrics", "citation statistics"]
|
|
@@ -3,7 +3,7 @@ name: journal-metrics-guide
|
|
|
3
3
|
description: "Understand journal impact factors, h5-index, CiteScore, and SJR"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "📊"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "metadata"
|
|
9
9
|
keywords: ["impact factor", "journal metrics", "h5-index", "CiteScore", "SJR", "journal ranking"]
|
|
@@ -3,7 +3,7 @@ name: orcid-integration-guide
|
|
|
3
3
|
description: "Set up and leverage ORCID for researcher identification and profiles"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🪪"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "metadata"
|
|
9
9
|
keywords: ["ORCID", "researcher ID", "author disambiguation", "scholarly identity", "publication profile"]
|
|
@@ -1,9 +1,9 @@
|
|
|
1
1
|
---
|
|
2
2
|
name: search-skills
|
|
3
|
-
description: "
|
|
3
|
+
description: "31 database search skills. Trigger: finding papers, search strategies, querying academic databases. Design: one skill per database/tool with API details, query syntax, and rate limits."
|
|
4
4
|
---
|
|
5
5
|
|
|
6
|
-
# Database Search —
|
|
6
|
+
# Database Search — 31 Skills
|
|
7
7
|
|
|
8
8
|
Select the skill matching the user's need, then `read` its SKILL.md.
|
|
9
9
|
|
|
@@ -33,7 +33,6 @@ Select the skill matching the user's need, then `read` its SKILL.md.
|
|
|
33
33
|
| [open-semantic-search-guide](./open-semantic-search-guide/SKILL.md) | Self-hosted semantic search and text mining platform |
|
|
34
34
|
| [openaire-api](./openaire-api/SKILL.md) | Search EU-funded research outputs via the OpenAIRE Graph API |
|
|
35
35
|
| [openalex-api](./openalex-api/SKILL.md) | Query the OpenAlex catalog of scholarly works, authors, and institutions |
|
|
36
|
-
| [paper-search-mcp-guide](./paper-search-mcp-guide/SKILL.md) | MCP server for searching papers across arXiv, PubMed, bioRxiv |
|
|
37
36
|
| [plos-open-access-api](./plos-open-access-api/SKILL.md) | Search PLOS open access journals with full-text Solr-powered API |
|
|
38
37
|
| [pubmed-api](./pubmed-api/SKILL.md) | Search biomedical literature and retrieve records via PubMed E-utilities |
|
|
39
38
|
| [scielo-api](./scielo-api/SKILL.md) | Access Latin American and developing world research via SciELO API |
|
|
@@ -7,7 +7,7 @@ metadata:
|
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["arxiv", "batch search", "preprint", "report generation", "literature monitoring", "research trends"]
|
|
10
|
-
source: "
|
|
10
|
+
source: "wentor-research-plugins"
|
|
11
11
|
---
|
|
12
12
|
|
|
13
13
|
# arXiv Batch Reporting
|
|
@@ -130,4 +130,4 @@ reports/
|
|
|
130
130
|
|
|
131
131
|
- arXiv API documentation: https://info.arxiv.org/help/api/index.html
|
|
132
132
|
- arXiv category taxonomy: https://arxiv.org/category_taxonomy
|
|
133
|
-
- arXiv Batch Search:
|
|
133
|
+
- arXiv Batch Search: wentor-research-plugins
|
|
@@ -3,7 +3,7 @@ name: boolean-search-guide
|
|
|
3
3
|
description: "Master Boolean operators and advanced search syntax for academic databases"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔎"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["boolean search", "search operators", "database search", "PubMed", "Web of Science", "search strategy"]
|
|
@@ -3,7 +3,7 @@ name: citation-chaining-guide
|
|
|
3
3
|
description: "Forward and backward citation chaining techniques for literature search"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔗"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["citation tracking", "advanced search", "search strategy", "literature search"]
|
|
@@ -3,7 +3,7 @@ name: database-comparison-guide
|
|
|
3
3
|
description: "Compare major academic databases and when to use each for research"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🗄️"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["academic database search", "scholarly database", "search strategy", "field-specific search"]
|
|
@@ -7,7 +7,7 @@ metadata:
|
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["exhaustive search", "systematic search", "multi-database", "literature review", "search strategy", "PRISMA"]
|
|
10
|
-
source: "
|
|
10
|
+
source: "wentor-research-plugins"
|
|
11
11
|
---
|
|
12
12
|
|
|
13
13
|
# Deep Literature Search
|
|
@@ -145,5 +145,5 @@ Save your complete search strategies (exact query strings, dates, result counts
|
|
|
145
145
|
|
|
146
146
|
- PRISMA 2020 Statement: https://www.prisma-statement.org
|
|
147
147
|
- Cochrane Handbook, Ch. 4 (Searching for studies): https://training.cochrane.org/handbook
|
|
148
|
-
- Literature Search tool:
|
|
148
|
+
- Literature Search tool: wentor-research-plugins
|
|
149
149
|
- Bramer, W.M. et al. (2017). "De-duplication of database search results." BMC Medical Research Methodology.
|
|
@@ -3,7 +3,7 @@ name: google-scholar-guide
|
|
|
3
3
|
description: "Advanced Google Scholar search techniques for comprehensive literature discovery"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔎"
|
|
7
7
|
category: "literature"
|
|
8
8
|
subcategory: "search"
|
|
9
9
|
keywords: ["academic database search", "search strategy", "Boolean search", "advanced search", "Google Scholar"]
|
|
@@ -3,7 +3,7 @@ name: mesh-terms-guide
|
|
|
3
3
|
description: "Navigate MeSH vocabulary for precise PubMed and MEDLINE searches"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
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+
emoji: "🧬"
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7
7
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category: "literature"
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8
8
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subcategory: "search"
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9
9
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keywords: ["MeSH terms", "PubMed", "MEDLINE", "controlled vocabulary", "medical subject headings", "literature search"]
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@@ -3,7 +3,7 @@ name: systematic-search-strategy
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3
3
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description: "Construct rigorous systematic search strategies for literature reviews"
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4
4
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metadata:
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5
5
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openclaw:
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6
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-
emoji: "
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6
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+
emoji: "🎯"
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7
7
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category: "literature"
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8
8
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subcategory: "search"
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9
9
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keywords: ["search strategy", "Boolean search", "search string construction", "advanced search", "systematic review"]
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@@ -1,6 +1,6 @@
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1
1
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---
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2
2
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name: automation-skills
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3
|
-
description: "10 research automation skills
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3
|
+
description: "10 research automation skills. Trigger: automating experiments, tracking results, reproducible pipelines. Design: ML experiment management, workflow orchestration, and lab automation tools."
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4
4
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---
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5
5
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6
6
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# Research Automation — 10 Skills
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@@ -3,7 +3,7 @@ name: data-collection-automation
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3
3
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description: "Automate survey deployment, data collection, and pipeline management"
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4
4
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metadata:
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5
5
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openclaw:
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6
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-
emoji: "
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6
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+
emoji: "🤖"
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7
7
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category: "research"
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|
8
8
|
subcategory: "automation"
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|
9
9
|
keywords: ["data collection", "survey automation", "pipeline", "Qualtrics API", "research automation", "ETL"]
|
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@@ -3,7 +3,7 @@ name: research-workflow-automation
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3
3
|
description: "Automate repetitive research tasks with pipelines, schedulers, and scripting"
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4
4
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metadata:
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5
5
|
openclaw:
|
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6
|
-
emoji: "
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6
|
+
emoji: "⚙️"
|
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7
7
|
category: "research"
|
|
8
8
|
subcategory: "automation"
|
|
9
9
|
keywords: ["workflow management", "pipeline scheduler", "research automation", "scientific workflow", "task automation"]
|
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@@ -1,6 +1,6 @@
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|
|
1
1
|
---
|
|
2
2
|
name: deep-research-skills
|
|
3
|
-
description: "13 deep research & systematic reviews skills
|
|
3
|
+
description: "13 deep research & systematic reviews skills. Trigger: systematic reviews, multi-source synthesis, comprehensive literature surveys. Design: multi-step research protocols with quality assessment and evidence grading."
|
|
4
4
|
---
|
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5
5
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6
6
|
# Deep Research & Systematic Reviews — 13 Skills
|
|
@@ -3,7 +3,7 @@ name: meta-synthesis-guide
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|
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3
3
|
description: "Conduct qualitative meta-synthesis and evidence synthesis methods"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "⛓️"
|
|
7
7
|
category: "research"
|
|
8
8
|
subcategory: "deep-research"
|
|
9
9
|
keywords: ["meta-synthesis", "qualitative evidence synthesis", "meta-ethnography", "thematic synthesis", "systematic review"]
|
|
@@ -3,7 +3,7 @@ name: scoping-review-guide
|
|
|
3
3
|
description: "Scoping review methodology for broad evidence mapping"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔭"
|
|
7
7
|
category: "research"
|
|
8
8
|
subcategory: "deep-research"
|
|
9
9
|
keywords: ["scoping review", "scoping study", "rapid review", "umbrella review"]
|
|
@@ -3,7 +3,7 @@ name: systematic-review-guide
|
|
|
3
3
|
description: "Systematic review methodology with PRISMA and evidence synthesis"
|
|
4
4
|
metadata:
|
|
5
5
|
openclaw:
|
|
6
|
-
emoji: "
|
|
6
|
+
emoji: "🔍"
|
|
7
7
|
category: "research"
|
|
8
8
|
subcategory: "deep-research"
|
|
9
9
|
keywords: ["systematic review methodology", "evidence synthesis", "PRISMA flowchart", "risk of bias assessment"]
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
---
|
|
2
2
|
name: funding-skills
|
|
3
|
-
description: "9 grants & funding skills
|
|
3
|
+
description: "9 grants & funding skills. Trigger: grant applications, funding search, budget planning, data repositories. Design: funder-specific guides with eligibility, submission requirements, and timelines."
|
|
4
4
|
---
|
|
5
5
|
|
|
6
6
|
# Grants & Funding — 9 Skills
|