@wentorai/research-plugins 1.3.1 → 1.4.0

package/skills/domains/biomedical/medical-imaging-guide/SKILL.md

@@ -3,7 +3,7 @@ name: medical-imaging-guide
 description: "Medical image analysis with deep learning for research applications"
 metadata:
   openclaw:
-    emoji: "microscope"
+    emoji: "🔬"
     category: "domains"
     subcategory: "biomedical"
     keywords: ["medical imaging", "deep learning", "image segmentation", "radiology AI", "pathology", "convolutional neural networks"]

package/skills/domains/biomedical/pdb-structure-api/SKILL.md

@@ -0,0 +1,219 @@
+---
+name: pdb-structure-api
+description: "Search and retrieve 3D protein structures from the RCSB Protein Data Bank"
+metadata:
+  openclaw:
+    emoji: "🔮"
+    category: "domains"
+    subcategory: "biomedical"
+    keywords: ["protein structure", "PDB", "crystallography", "structural biology", "RCSB", "molecular structure"]
+    source: "https://data.rcsb.org"
+---
+
+# RCSB Protein Data Bank API Guide
+
+## Overview
+
+The RCSB Protein Data Bank (PDB) is the single global archive for experimentally determined 3D structures of biological macromolecules. It hosts over 200,000 structures resolved by X-ray crystallography, cryo-EM, NMR spectroscopy, and other methods. Each entry includes atomic coordinates, experimental metadata, polymer sequences, bound ligands, and literature references.
+
+Two complementary APIs are available. The **Data API** (`data.rcsb.org`) serves structured entry metadata, polymer entities, and chemical components via RESTful GET endpoints. The **Search API** (`search.rcsb.org`) supports full-text, attribute-based, sequence similarity, and structure similarity searches.
+
+## Authentication
+
+No authentication required. Both APIs are freely accessible without API keys, tokens, or registration.
+
+## Core Endpoints
+
+### Data API: Get Entry by PDB ID
+
+Retrieve metadata for a structure including experimental method, resolution, citations, and bound components.
+
+- **URL**: `GET https://data.rcsb.org/rest/v1/core/entry/{pdb_id}`
+
+```bash
+curl "https://data.rcsb.org/rest/v1/core/entry/4HHB"
+```
+
+- **Response** (key fields):
+
+```json
+{
+  "rcsb_id": "4HHB",
+  "struct": {
+    "title": "THE CRYSTAL STRUCTURE OF HUMAN DEOXYHAEMOGLOBIN AT 1.74 ANGSTROMS RESOLUTION"
+  },
+  "exptl": [{"method": "X-RAY DIFFRACTION"}],
+  "rcsb_entry_info": {
+    "deposited_atom_count": 4779,
+    "molecular_weight": 64.74,
+    "polymer_composition": "heteromeric protein",
+    "polymer_entity_count_protein": 2,
+    "resolution_combined": [1.74],
+    "nonpolymer_bound_components": ["HEM"]
+  }
+}
+```
+
+### Data API: Get Polymer Entity
+
+Retrieve protein/nucleic acid entity details including sequence, organism, and gene info.
+
+- **URL**: `GET https://data.rcsb.org/rest/v1/core/polymer_entity/{pdb_id}/{entity_id}`
+
+```bash
+curl "https://data.rcsb.org/rest/v1/core/polymer_entity/4HHB/1"
+```
+
+- **Response** (key fields):
+
+```json
+{
+  "entity_poly": {
+    "pdbx_seq_one_letter_code_can": "VLSPADKTNVKAAWGKVGAHAGEYGAEALERMFLSFPTTKTYFPHFDLSH...",
+    "rcsb_entity_polymer_type": "Protein",
+    "rcsb_sample_sequence_length": 141,
+    "type": "polypeptide(L)"
+  },
+  "entity_src_gen": [{
+    "gene_src_common_name": "Human",
+    "pdbx_gene_src_scientific_name": "Homo sapiens",
+    "pdbx_gene_src_ncbi_taxonomy_id": "9606"
+  }]
+}
+```
+
+### Data API: Get Chemical Component
+
+Retrieve ligand or small molecule metadata by component ID.
+
+- **URL**: `GET https://data.rcsb.org/rest/v1/core/chemcomp/{comp_id}`
+
+```bash
+curl "https://data.rcsb.org/rest/v1/core/chemcomp/HEM"
+```
+
+- **Response** (key fields):
+
+```json
+{
+  "rcsb_id": "HEM",
+  "chem_comp": {
+    "formula": "C34 H32 Fe N4 O4",
+    "formula_weight": 616.487,
+    "name": "PROTOPORPHYRIN IX CONTAINING FE",
+    "type": "non-polymer"
+  }
+}
+```
+
+### Search API: Full-Text Search
+
+Search across all PDB entries with free-text queries. Returns ranked results by relevance.
+
+- **URL**: `POST https://search.rcsb.org/rcsbsearch/v2/query`
+- **Headers**: `Content-Type: application/json`
+- **Key body fields**: `query.type` (`"terminal"`), `query.service` (`"full_text"`, `"text"`, `"sequence"`, `"structure"`), `query.parameters.value`, `return_type` (`"entry"`, `"polymer_entity"`, `"assembly"`), `request_options.paginate.start/rows`
+
+```bash
+curl -X POST "https://search.rcsb.org/rcsbsearch/v2/query" \
+  -H "Content-Type: application/json" \
+  -d '{
+    "query": {
+      "type": "terminal",
+      "service": "full_text",
+      "parameters": {"value": "hemoglobin"}
+    },
+    "return_type": "entry",
+    "request_options": {
+      "results_content_type": ["experimental"],
+      "paginate": {"start": 0, "rows": 3}
+    }
+  }'
+```
+
+- **Response**:
+
+```json
+{
+  "query_id": "6f7192a6-d65b-4ff1-9d94-37b9600a8864",
+  "result_type": "entry",
+  "total_count": 8960,
+  "result_set": [
+    {"identifier": "3GOU", "score": 1.0},
+    {"identifier": "6IHX", "score": 0.9995},
+    {"identifier": "2PGH", "score": 0.9985}
+  ]
+}
+```
+
+For attribute-based searches, use `"service": "text"` with `"attribute"` and `"operator"` fields. Combine multiple criteria with `"type": "group"` and `"logical_operator": "and"`.
+
+## Rate Limits
+
+No formal rate limits or rate-limit headers are published. RCSB recommends reasonable request rates. For bulk data, use FTP downloads at `https://files.rcsb.org/pub/pdb/` or `ftp://ftp.wwpdb.org/pub/pdb/` instead of iterative API calls.
+
+## Academic Use Cases
+
+- **Structure-Based Drug Design**: Retrieve target protein structures with bound ligands to analyze binding pockets, then search for similar structures to identify drug scaffolds.
+- **Comparative Structural Analysis**: Search all structures of a protein family, compare resolution and methods, select the best template for homology modeling.
+- **Protein Engineering**: Retrieve wild-type structures and cross-reference with mutant entries to analyze how mutations affect fold stability and ligand interactions.
+
+## Code Examples
+
+### Search and Retrieve Structures
+
+```python
+import requests
+
+# Search for kinase inhibitor structures
+search_body = {
+    "query": {"type": "terminal", "service": "full_text",
+              "parameters": {"value": "tyrosine kinase inhibitor"}},
+    "return_type": "entry",
+    "request_options": {"results_content_type": ["experimental"],
+                        "paginate": {"start": 0, "rows": 5}}
+}
+results = requests.post("https://search.rcsb.org/rcsbsearch/v2/query",
+                        json=search_body).json()
+print(f"Total hits: {results['total_count']}")
+
+# Retrieve metadata for each hit
+for hit in results["result_set"]:
+    pdb_id = hit["identifier"]
+    entry = requests.get(
+        f"https://data.rcsb.org/rest/v1/core/entry/{pdb_id}").json()
+    info = entry["rcsb_entry_info"]
+    print(f"{pdb_id}: {entry['struct']['title'][:80]}")
+    print(f"  Resolution: {info.get('resolution_combined', ['N/A'])[0]} A, "
+          f"Method: {info['experimental_method']}")
+```
+
+### Extract Polymer Sequences
+
+```python
+import requests
+
+pdb_id = "4HHB"
+entry = requests.get(
+    f"https://data.rcsb.org/rest/v1/core/entry/{pdb_id}").json()
+
+for eid in range(1, entry["rcsb_entry_info"]["polymer_entity_count"] + 1):
+    entity = requests.get(
+        f"https://data.rcsb.org/rest/v1/core/polymer_entity/{pdb_id}/{eid}"
+    ).json()
+    poly = entity["entity_poly"]
+    src = entity.get("rcsb_entity_source_organism", [{}])[0]
+    print(f"Entity {eid}: {poly['rcsb_entity_polymer_type']} "
+          f"({src.get('ncbi_scientific_name', 'N/A')})")
+    print(f"  {poly['rcsb_sample_sequence_length']} residues: "
+          f"{poly['pdbx_seq_one_letter_code_can'][:50]}...")
+```
+
+## References
+
+- Data API docs: https://data.rcsb.org/redoc/index.html
+- Search API docs: https://search.rcsb.org/index.html
+- RCSB PDB homepage: https://www.rcsb.org/
+- Programmatic access guide: https://www.rcsb.org/docs/programmatic-access
+- PDB file format: https://www.wwpdb.org/documentation/file-format
+- Worldwide PDB: https://www.wwpdb.org/

package/skills/domains/business/SKILL.md

@@ -1,9 +1,9 @@
 ---
 name: business-skills
-description: "6 business research skills (architecture-design, innovation-management, market-analysis, operations-research...). Trigger: business strategy, market analysis, competitive intelligence. Design: analytical frameworks and methods for management and innovation research."
+description: "5 business research skills. Trigger: business strategy, market analysis, competitive intelligence. Design: analytical frameworks and methods for management and innovation research."
 ---
 
-# Business Research — 6 Skills
+# Business Research — 5 Skills
 
 Select the skill matching the user's need, then `read` its SKILL.md.
 
@@ -14,4 +14,3 @@ Select the skill matching the user's need, then `read` its SKILL.md.
 | [market-analysis-guide](./market-analysis-guide/SKILL.md) | Structured frameworks for market sizing, competitive analysis, and strategic ... |
 | [operations-research-guide](./operations-research-guide/SKILL.md) | Optimization and operations research methods for business and logistics |
 | [strategic-management-guide](./strategic-management-guide/SKILL.md) | Frameworks for strategic planning, resource allocation, and organizational an... |
-| [xpert-bi-guide](./xpert-bi-guide/SKILL.md) | AI business intelligence agent with NL-to-SQL and dashboards |

package/skills/domains/business/innovation-management-guide/SKILL.md

@@ -3,7 +3,7 @@ name: innovation-management-guide
 description: "Innovation metrics, R&D management research, and technology forecasting"
 metadata:
   openclaw:
-    emoji: "light-bulb"
+    emoji: "💡"
     category: "domains"
     subcategory: "business"
     keywords: ["innovation", "r-and-d", "technology-management", "bibliometrics", "diffusion", "strategy"]

package/skills/domains/business/market-analysis-guide/SKILL.md

@@ -3,7 +3,7 @@ name: market-analysis-guide
 description: "Structured frameworks for market sizing, competitive analysis, and strategic ..."
 metadata:
   openclaw:
-    emoji: "chart_with_upwards_trend"
+    emoji: "📈"
     category: "domains"
     subcategory: "business"
     keywords: ["market analysis", "strategic management", "operations management", "competitive analysis", "market sizing"]

package/skills/domains/business/operations-research-guide/SKILL.md

@@ -3,7 +3,7 @@ name: operations-research-guide
 description: "Optimization and operations research methods for business and logistics"
 metadata:
   openclaw:
-    emoji: "gear"
+    emoji: "⚙️"
     category: "domains"
     subcategory: "business"
     keywords: ["optimization", "operations-research", "linear-programming", "scheduling", "supply-chain", "simulation"]

package/skills/domains/business/strategic-management-guide/SKILL.md

@@ -3,7 +3,7 @@ name: strategic-management-guide
 description: "Frameworks for strategic planning, resource allocation, and organizational an..."
 metadata:
   openclaw:
-    emoji: "chess_pawn"
+    emoji: "♟️"
     category: "domains"
     subcategory: "business"
     keywords: ["strategic management", "operations management", "market analysis", "organizational strategy", "resource allocation"]

package/skills/domains/chemistry/SKILL.md

@@ -1,15 +1,16 @@
 ---
 name: chemistry-skills
-description: "8 chemistry skills (cactus-cheminformatics, chemeagle, chemgraph-agent, computational-chemistry...). Trigger: chemical structure analysis, reaction prediction, molecular modeling. Design: computational chemistry tools and cheminformatics workflows."
+description: "9 chemistry skills. Trigger: chemical structure analysis, reaction prediction, molecular modeling. Design: computational chemistry tools and cheminformatics workflows."
 ---
 
-# Chemistry — 8 Skills
+# Chemistry — 9 Skills
 
 Select the skill matching the user's need, then `read` its SKILL.md.
 
 | Skill | Description |
 |-------|-------------|
 | [cactus-cheminformatics-guide](./cactus-cheminformatics-guide/SKILL.md) | PNNL cheminformatics LLM agent for molecular analysis |
+| [catalysis-hub-api](./catalysis-hub-api/SKILL.md) | Query computational catalysis reaction data via Catalysis Hub GraphQL |
 | [chemeagle-guide](./chemeagle-guide/SKILL.md) | Multi-agent system for chemical literature information extraction |
 | [chemgraph-agent-guide](./chemgraph-agent-guide/SKILL.md) | Automate molecular simulations with the ChemGraph agentic framework |
 | [computational-chemistry-guide](./computational-chemistry-guide/SKILL.md) | DFT, molecular simulation, and reaction prediction tools for chemists |

package/skills/domains/chemistry/catalysis-hub-api/SKILL.md

@@ -0,0 +1,171 @@
+---
+name: catalysis-hub-api
+description: "Query computational catalysis reaction data via Catalysis Hub GraphQL"
+metadata:
+  openclaw:
+    emoji: "⚗️"
+    category: "domains"
+    subcategory: "chemistry"
+    keywords: ["catalysis", "DFT", "reaction energy", "surface chemistry", "computational chemistry", "GraphQL"]
+    source: "https://www.catalysis-hub.org"
+---
+
+# Catalysis Hub GraphQL API Guide
+
+## Overview
+
+Catalysis Hub is an open-access database of DFT-calculated reaction energies and activation barriers for heterogeneous catalysis, developed at SUNCAT Center (Stanford/SLAC). It aggregates computational results from published studies, enabling researchers to search, compare, and reuse DFT data for catalyst screening and mechanism validation.
+
+The GraphQL endpoint provides structured access to reactions, publications, and atomic structures. All data is linked to peer-reviewed publications and includes computational details (DFT code, XC functional, surface facet, coverage).
+
+## Authentication
+
+No authentication required. Catalysis Hub is a free public service with no API keys.
+
+## GraphQL Schema
+
+**Endpoint:** `https://api.catalysis-hub.org/graphql`
+
+All queries use HTTP POST with a JSON `query` field. Responses follow the Relay connection pattern (`edges`/`node`).
+
+### Root Query Types
+
+| Query | Description |
+|-------|-------------|
+| `reactions` | DFT-computed reaction energies and barriers |
+| `publications` | Published studies linked to reaction data |
+| `systems` | Atomic structure data (ASE Atoms objects) |
+| `species` | Chemical species involved in reactions |
+
+### Reaction Fields
+
+`chemicalComposition`, `surfaceComposition`, `facet`, `reactionEnergy` (eV), `activationEnergy` (eV), `dftCode` (e.g. `Quantum-Espresso`, `VASP-5.4.4`), `dftFunctional` (e.g. `RPBE`), `reactants` (JSON), `products` (JSON), `Equation` (e.g. `0.5O2(g) + * -> O*`)
+
+### Publication Fields
+
+`title`, `authors` (JSON), `journal`, `year` (Int), `doi`, `reactions` (linked Reaction list)
+
+## Core Queries
+
+### List Reactions
+
+```bash
+curl -s -X POST "https://api.catalysis-hub.org/graphql" \
+  -H "Content-Type: application/json" -d '{"query":"{ reactions(first: 3) { edges { node { chemicalComposition reactionEnergy activationEnergy surfaceComposition } } } }"}'
+```
+
+Response (truncated):
+
+```json
+{"data":{"reactions":{"edges":[
+  {"node":{"chemicalComposition":"Nb9Sn3","reactionEnergy":-9.687,"activationEnergy":null,"surfaceComposition":"Nb3Sn"}},
+  {"node":{"chemicalComposition":"Ir3V9","reactionEnergy":-8.395,"activationEnergy":null,"surfaceComposition":"V3Ir"}},
+  {"node":{"chemicalComposition":"Ir9Ni3","reactionEnergy":-2.005,"activationEnergy":null,"surfaceComposition":"Ir3Ni"}}
+]}}}
+```
+
+### Filter by Surface Composition
+
+```bash
+curl -s -X POST "https://api.catalysis-hub.org/graphql" \
+  -H "Content-Type: application/json" -d '{"query":"{ reactions(first: 2, surfaceComposition: \"Pt\") { edges { node { chemicalComposition surfaceComposition facet reactionEnergy dftCode dftFunctional Equation } } } }"}'
+```
+
+Response (truncated):
+
+```json
+{"data":{"reactions":{"edges":[
+  {"node":{"chemicalComposition":"Pt28","surfaceComposition":"Pt","facet":"100","reactionEnergy":0.856,"dftCode":"Quantum-Espresso","dftFunctional":"RPBE","Equation":"0.5N2(g) + * -> N*"}},
+  {"node":{"chemicalComposition":"Pt28","surfaceComposition":"Pt","facet":"100","reactionEnergy":-0.984,"dftCode":"Quantum-Espresso","dftFunctional":"RPBE","Equation":"0.5O2(g) + * -> O*"}}
+]}}}
+```
+
+### Search by Chemical Composition (partial match with `~` prefix)
+
+```bash
+curl -s -X POST "https://api.catalysis-hub.org/graphql" \
+  -H "Content-Type: application/json" -d '{"query":"{ reactions(first: 3, chemicalComposition: \"~CO\") { edges { node { chemicalComposition reactionEnergy dftCode } } } }"}'
+```
+
+Response (truncated):
+
+```json
+{"data":{"reactions":{"edges":[
+  {"node":{"chemicalComposition":"Co9Cr2FeMnNiO20","reactionEnergy":1.910,"dftCode":"VASP-5.4.4"}},
+  {"node":{"chemicalComposition":"Co9Cr2FeMnNiO20","reactionEnergy":0.648,"dftCode":"VASP-5.4.4"}},
+  {"node":{"chemicalComposition":"Co10CrFeMnNiO20","reactionEnergy":3.167,"dftCode":"VASP-5.4.4"}}
+]}}}
+```
+
+### Query Publications
+
+```bash
+curl -s -X POST "https://api.catalysis-hub.org/graphql" \
+  -H "Content-Type: application/json" -d '{"query":"{ publications(first: 2, year: 2019) { edges { node { title authors journal year doi } } } }"}'
+```
+
+Response (truncated):
+
+```json
+{"data":{"publications":{"edges":[
+  {"node":{"title":"High-Throughput Calculations of Catalytic Properties of Bimetallic Alloy Surfaces","authors":"[\"Mamun, Osman\",\"Winther, Kirsten T.\",\"Boes, Jacob R.\",\"Bligaard, Thomas\"]","journal":"Scientific Data","year":2019,"doi":"10.1038/s41597-019-0080-z"}},
+  {"node":{"title":"Selective high-temperature CO2 electrolysis enabled by oxidized carbon intermediates","journal":"Nature Energy","year":2019,"doi":"10.1038/s41560-019-0457-4"}}
+]}}}
+```
+
+## Rate Limits
+
+- No documented rate limits; add 200-500ms delays between requests as courtesy
+- Use `first` to limit results; pagination via cursor-based `after` argument
+
+## Academic Use Cases
+
+- **Catalyst Screening:** Compare adsorption energies across bimetallic alloy surfaces to identify candidates for target reactions (ORR, NRR, HER)
+- **DFT Validation:** Cross-reference your DFT results against published values matched by surface, facet, and functional
+- **Scaling Relations:** Retrieve adsorption energies across surfaces to build Bronsted-Evans-Polanyi (BEP) relations
+- **Literature Discovery:** Find publications by year or linked reactions for citation and methodology verification
+
+## Python Example
+
+```python
+import requests
+
+ENDPOINT = "https://api.catalysis-hub.org/graphql"
+
+def query_catalysis_hub(query):
+    """Execute a GraphQL query against Catalysis Hub."""
+    resp = requests.post(ENDPOINT, json={"query": query})
+    resp.raise_for_status()
+    return resp.json()["data"]
+
+# Screen adsorption energies on Pt surfaces
+data = query_catalysis_hub("""
+{
+  reactions(first: 20, surfaceComposition: "Pt") {
+    edges { node { Equation facet reactionEnergy dftFunctional } }
+  }
+}
+""")
+for edge in data["reactions"]["edges"]:
+    r = edge["node"]
+    print(f"{r['Equation']:<30} facet={r['facet']}  E={r['reactionEnergy']:+.3f} eV")
+
+# Publications with linked reactions
+pubs = query_catalysis_hub("""
+{
+  publications(first: 5, year: 2019) {
+    edges { node { title doi reactions { surfaceComposition Equation } } }
+  }
+}
+""")
+for edge in pubs["publications"]["edges"]:
+    pub = edge["node"]
+    print(f"{pub['title']} | DOI: {pub['doi']} | {len(pub.get('reactions') or [])} reactions")
+```
+
+## References
+
+- Catalysis Hub: https://www.catalysis-hub.org
+- GraphQL Endpoint: https://api.catalysis-hub.org/graphql
+- Winther et al., "Catalysis-Hub.org: An Open Electronic Structure Database for Surface Reactions," Sci. Data 6, 75 (2019). DOI: 10.1038/s41597-019-0081-y
+- SUNCAT Center: https://suncat.stanford.edu

package/skills/domains/chemistry/molecular-dynamics-guide/SKILL.md

@@ -3,7 +3,7 @@ name: molecular-dynamics-guide
 description: "Molecular dynamics simulation setup, execution, and trajectory analysis"
 metadata:
   openclaw:
-    emoji: "atom-symbol"
+    emoji: "⚛️"
     category: "domains"
     subcategory: "chemistry"
     keywords: ["molecular-dynamics", "simulation", "gromacs", "openmm", "force-field", "trajectory"]

package/skills/domains/chemistry/retrosynthesis-guide/SKILL.md

@@ -3,7 +3,7 @@ name: retrosynthesis-guide
 description: "Retrosynthetic analysis and computational reaction prediction"
 metadata:
   openclaw:
-    emoji: "flask"
+    emoji: "🧪"
     category: "domains"
     subcategory: "chemistry"
     keywords: ["retrosynthesis", "reaction prediction", "organic chemistry", "computational chemistry"]

package/skills/domains/chemistry/spectroscopy-analysis-guide/SKILL.md

@@ -3,7 +3,7 @@ name: spectroscopy-analysis-guide
 description: "Spectral data analysis for NMR, IR, mass spectrometry, and UV-Vis"
 metadata:
   openclaw:
-    emoji: "microscope"
+    emoji: "🔬"
     category: "domains"
     subcategory: "chemistry"
     keywords: ["spectroscopy", "nmr", "mass-spectrometry", "infrared", "uv-vis", "analytical-chemistry"]

package/skills/domains/cs/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: cs-skills
-description: "10 computer science skills (ai-security-papers, algorithms-complexity, code-llm-papers, dblp...). Trigger: algorithms, systems research, software engineering, security papers. Design: theory, complexity analysis, code-centric research, and security methods."
+description: "10 computer science skills. Trigger: algorithms, systems research, software engineering, security papers. Design: theory, complexity analysis, code-centric research, and security methods."
 ---
 
 # Computer Science — 10 Skills

package/skills/domains/cs/algorithms-complexity-guide/SKILL.md

@@ -3,7 +3,7 @@ name: algorithms-complexity-guide
 description: "Analyze algorithm complexity and computational efficiency for research"
 metadata:
   openclaw:
-    emoji: "gear"
+    emoji: "⚙️"
     category: "domains"
     subcategory: "cs"
     keywords: ["algorithms", "computational complexity", "Big-O", "NP-hard", "optimization", "data structures"]

package/skills/domains/cs/distributed-systems-guide/SKILL.md

@@ -3,7 +3,7 @@ name: distributed-systems-guide
 description: "Distributed systems design patterns and analysis for CS research"
 metadata:
   openclaw:
-    emoji: "globe-with-meridians"
+    emoji: "🌐"
     category: "domains"
     subcategory: "cs"
     keywords: ["distributed-systems", "consensus", "replication", "fault-tolerance", "scalability", "cap-theorem"]

package/skills/domains/cs/formal-verification-guide/SKILL.md

@@ -3,7 +3,7 @@ name: formal-verification-guide
 description: "Formal methods, theorem proving, and model checking for CS research"
 metadata:
   openclaw:
-    emoji: "check-mark"
+    emoji: "✅"
     category: "domains"
     subcategory: "cs"
     keywords: ["formal-verification", "theorem-proving", "model-checking", "tla-plus", "coq", "isabelle"]

package/skills/domains/cs/software-engineering-research/SKILL.md

@@ -3,7 +3,7 @@ name: software-engineering-research
 description: "Guide to software engineering research topics and methodologies"
 metadata:
   openclaw:
-    emoji: "code"
+    emoji: "💻"
     category: "domains"
     subcategory: "cs"
     keywords: ["software engineering", "distributed systems", "cybersecurity", "HCI"]

package/skills/domains/ecology/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: ecology-skills
-description: "5 ecology & environmental science skills (biodiversity-data, conservation-biology, gbif, inaturalist...). Trigger: biodiversity surveys, species data, environmental monitoring. Design: field data collection, spatial analysis, and conservation biology workflows."
+description: "5 ecology & environmental science skills. Trigger: biodiversity surveys, species data, environmental monitoring. Design: field data collection, spatial analysis, and conservation biology workflows."
 ---
 
 # Ecology & Environmental Science — 5 Skills

package/skills/domains/ecology/biodiversity-data-guide/SKILL.md

@@ -3,7 +3,7 @@ name: biodiversity-data-guide
 description: "Biodiversity data access, species occurrence, and ecological tools"
 metadata:
   openclaw:
-    emoji: "leaf"
+    emoji: "🍃"
     category: "domains"
     subcategory: "ecology"
     keywords: ["biodiversity", "taxonomy", "ecology", "evolutionary biology"]

package/skills/domains/ecology/conservation-biology-guide/SKILL.md

@@ -3,7 +3,7 @@ name: conservation-biology-guide
 description: "Apply conservation biology methods, databases, and assessment tools"
 metadata:
   openclaw:
-    emoji: "deciduous_tree"
+    emoji: "🌳"
     category: "domains"
     subcategory: "ecology"
     keywords: ["conservation biology", "biodiversity", "IUCN Red List", "species assessment", "habitat modeling", "wildlife"]

package/skills/domains/ecology/species-distribution-guide/SKILL.md

@@ -3,7 +3,7 @@ name: species-distribution-guide
 description: "Species distribution modeling with MaxEnt, SDM methods, and GBIF data"
 metadata:
   openclaw:
-    emoji: "paw-prints"
+    emoji: "🐾"
     category: "domains"
     subcategory: "ecology"
     keywords: ["species-distribution", "maxent", "sdm", "gbif", "ecological-niche", "biodiversity", "habitat"]

package/skills/domains/economics/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: economics-skills
-description: "9 economics skills (behavioral-economics, development-economics, fred, imf-data...). Trigger: economic modeling, policy analysis, macroeconomic data, FRED. Design: theory plus empirical methods with standard economics databases."
+description: "9 economics skills. Trigger: economic modeling, policy analysis, macroeconomic data, FRED. Design: theory plus empirical methods with standard economics databases."
 ---
 
 # Economics — 9 Skills

package/skills/domains/economics/behavioral-economics-guide/SKILL.md

@@ -3,7 +3,7 @@ name: behavioral-economics-guide
 description: "Behavioral economics research methods and key frameworks"
 metadata:
   openclaw:
-    emoji: "brain"
+    emoji: "🧠"
     category: "domains"
     subcategory: "economics"
     keywords: ["behavioral economics", "microeconomics", "development economics"]

package/skills/domains/economics/development-economics-guide/SKILL.md

@@ -3,7 +3,7 @@ name: development-economics-guide
 description: "Apply development economics research methods and data sources"
 metadata:
   openclaw:
-    emoji: "earth_africa"
+    emoji: "🌍"
     category: "domains"
     subcategory: "economics"
     keywords: ["development economics", "RCT", "impact evaluation", "poverty", "causal inference", "field experiments"]

package/skills/domains/education/SKILL.md

@@ -1,9 +1,9 @@
 ---
 name: education-skills
-description: "8 education research skills (academic-study-methods, assessment-design, curriculum-design, educational-research-methods...). Trigger: pedagogical research, course design, learning analytics, assessment. Design: evidence-based teaching methods and educational measurement tools."
+description: "7 education research skills. Trigger: pedagogical research, course design, learning analytics, assessment. Design: evidence-based teaching methods and educational measurement tools."
 ---
 
-# Education Research — 8 Skills
+# Education Research — 7 Skills
 
 Select the skill matching the user's need, then `read` its SKILL.md.
 
@@ -13,7 +13,6 @@ Select the skill matching the user's need, then `read` its SKILL.md.
 | [assessment-design-guide](./assessment-design-guide/SKILL.md) | Psychometrics and educational assessment design for researchers |
 | [curriculum-design-guide](./curriculum-design-guide/SKILL.md) | Systematic approaches to curriculum design using backward design and alignment |
 | [educational-research-methods](./educational-research-methods/SKILL.md) | Quantitative and qualitative research methods for education studies |
-| [edumcp-guide](./edumcp-guide/SKILL.md) | MCP server for educational content and learning management |
 | [learning-science-guide](./learning-science-guide/SKILL.md) | Evidence-based learning science principles for educational research and practice |
 | [mooc-analytics-guide](./mooc-analytics-guide/SKILL.md) | Analyzing MOOC data, learning analytics, and online education metrics |
 | [open-syllabus-api](./open-syllabus-api/SKILL.md) | Analyze most-taught books and texts via Open Syllabus analytics |