@wentorai/research-plugins 1.3.1 → 1.4.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (437) hide show
  1. package/README.md +32 -56
  2. package/curated/analysis/README.md +1 -13
  3. package/curated/domains/README.md +1 -5
  4. package/curated/literature/README.md +1 -10
  5. package/curated/research/README.md +1 -18
  6. package/curated/tools/README.md +1 -12
  7. package/curated/writing/README.md +1 -5
  8. package/index.ts +88 -5
  9. package/openclaw.plugin.json +3 -12
  10. package/package.json +3 -5
  11. package/skills/analysis/dataviz/SKILL.md +1 -1
  12. package/skills/analysis/dataviz/color-accessibility-guide/SKILL.md +1 -1
  13. package/skills/analysis/dataviz/geospatial-viz-guide/SKILL.md +1 -1
  14. package/skills/analysis/dataviz/interactive-viz-guide/SKILL.md +1 -1
  15. package/skills/analysis/dataviz/network-visualization-guide/SKILL.md +1 -1
  16. package/skills/analysis/dataviz/publication-figures-guide/SKILL.md +1 -1
  17. package/skills/analysis/econometrics/SKILL.md +1 -1
  18. package/skills/analysis/econometrics/causal-inference-guide/SKILL.md +1 -1
  19. package/skills/analysis/econometrics/iv-regression-guide/SKILL.md +1 -1
  20. package/skills/analysis/econometrics/mostly-harmless-guide/SKILL.md +3 -10
  21. package/skills/analysis/econometrics/panel-data-analyst/SKILL.md +1 -1
  22. package/skills/analysis/econometrics/panel-data-guide/SKILL.md +1 -1
  23. package/skills/analysis/econometrics/stata-accounting-guide/SKILL.md +1 -1
  24. package/skills/analysis/econometrics/stata-analyst-guide/SKILL.md +1 -1
  25. package/skills/analysis/econometrics/time-series-guide/SKILL.md +1 -1
  26. package/skills/analysis/statistics/SKILL.md +2 -2
  27. package/skills/analysis/statistics/bayesian-statistics-guide/SKILL.md +1 -1
  28. package/skills/analysis/statistics/meta-analysis-guide/SKILL.md +2 -2
  29. package/skills/analysis/statistics/nonparametric-tests-guide/SKILL.md +1 -1
  30. package/skills/analysis/statistics/power-analysis-guide/SKILL.md +1 -1
  31. package/skills/analysis/statistics/sem-guide/SKILL.md +1 -1
  32. package/skills/analysis/statistics/survival-analysis-guide/SKILL.md +1 -1
  33. package/skills/analysis/wrangling/SKILL.md +1 -1
  34. package/skills/analysis/wrangling/data-cleaning-pipeline/SKILL.md +1 -1
  35. package/skills/analysis/wrangling/missing-data-handling/SKILL.md +1 -1
  36. package/skills/analysis/wrangling/questionnaire-design-guide/SKILL.md +1 -1
  37. package/skills/analysis/wrangling/stata-data-cleaning/SKILL.md +1 -1
  38. package/skills/analysis/wrangling/survey-data-processing/SKILL.md +1 -1
  39. package/skills/analysis/wrangling/text-mining-guide/SKILL.md +1 -1
  40. package/skills/domains/ai-ml/SKILL.md +3 -2
  41. package/skills/domains/ai-ml/computer-vision-guide/SKILL.md +1 -1
  42. package/skills/domains/ai-ml/generative-ai-guide/SKILL.md +1 -0
  43. package/skills/domains/ai-ml/huggingface-api/SKILL.md +251 -0
  44. package/skills/domains/ai-ml/llm-evaluation-guide/SKILL.md +1 -1
  45. package/skills/domains/ai-ml/prompt-engineering-research/SKILL.md +1 -1
  46. package/skills/domains/ai-ml/reinforcement-learning-guide/SKILL.md +1 -1
  47. package/skills/domains/ai-ml/transformer-architecture-guide/SKILL.md +1 -1
  48. package/skills/domains/biomedical/SKILL.md +9 -2
  49. package/skills/domains/biomedical/alphafold-api/SKILL.md +227 -0
  50. package/skills/domains/biomedical/biothings-api/SKILL.md +296 -0
  51. package/skills/domains/biomedical/clinical-research-guide/SKILL.md +1 -1
  52. package/skills/domains/biomedical/clinicaltrials-api-v2/SKILL.md +216 -0
  53. package/skills/domains/biomedical/enrichr-api/SKILL.md +264 -0
  54. package/skills/domains/biomedical/ensembl-rest-api/SKILL.md +204 -0
  55. package/skills/domains/biomedical/epidemiology-guide/SKILL.md +1 -1
  56. package/skills/domains/biomedical/genomics-analysis-guide/SKILL.md +1 -1
  57. package/skills/domains/biomedical/medical-data-api/SKILL.md +197 -0
  58. package/skills/domains/biomedical/medical-imaging-guide/SKILL.md +1 -1
  59. package/skills/domains/biomedical/pdb-structure-api/SKILL.md +219 -0
  60. package/skills/domains/business/SKILL.md +2 -3
  61. package/skills/domains/business/innovation-management-guide/SKILL.md +1 -1
  62. package/skills/domains/business/market-analysis-guide/SKILL.md +1 -1
  63. package/skills/domains/business/operations-research-guide/SKILL.md +1 -1
  64. package/skills/domains/business/strategic-management-guide/SKILL.md +1 -1
  65. package/skills/domains/chemistry/SKILL.md +3 -2
  66. package/skills/domains/chemistry/catalysis-hub-api/SKILL.md +171 -0
  67. package/skills/domains/chemistry/molecular-dynamics-guide/SKILL.md +1 -1
  68. package/skills/domains/chemistry/retrosynthesis-guide/SKILL.md +1 -1
  69. package/skills/domains/chemistry/spectroscopy-analysis-guide/SKILL.md +1 -1
  70. package/skills/domains/cs/SKILL.md +1 -1
  71. package/skills/domains/cs/algorithms-complexity-guide/SKILL.md +1 -1
  72. package/skills/domains/cs/distributed-systems-guide/SKILL.md +1 -1
  73. package/skills/domains/cs/formal-verification-guide/SKILL.md +1 -1
  74. package/skills/domains/cs/software-engineering-research/SKILL.md +1 -1
  75. package/skills/domains/ecology/SKILL.md +1 -1
  76. package/skills/domains/ecology/biodiversity-data-guide/SKILL.md +1 -1
  77. package/skills/domains/ecology/conservation-biology-guide/SKILL.md +1 -1
  78. package/skills/domains/ecology/species-distribution-guide/SKILL.md +1 -1
  79. package/skills/domains/economics/SKILL.md +1 -1
  80. package/skills/domains/economics/behavioral-economics-guide/SKILL.md +1 -1
  81. package/skills/domains/economics/development-economics-guide/SKILL.md +1 -1
  82. package/skills/domains/education/SKILL.md +2 -3
  83. package/skills/domains/education/assessment-design-guide/SKILL.md +1 -1
  84. package/skills/domains/education/curriculum-design-guide/SKILL.md +1 -1
  85. package/skills/domains/education/educational-research-methods/SKILL.md +1 -1
  86. package/skills/domains/education/learning-science-guide/SKILL.md +1 -1
  87. package/skills/domains/education/mooc-analytics-guide/SKILL.md +1 -1
  88. package/skills/domains/finance/SKILL.md +1 -1
  89. package/skills/domains/finance/financial-data-analysis/SKILL.md +1 -1
  90. package/skills/domains/finance/portfolio-optimization-guide/SKILL.md +1 -1
  91. package/skills/domains/finance/quantitative-finance-guide/SKILL.md +1 -1
  92. package/skills/domains/finance/risk-modeling-guide/SKILL.md +1 -1
  93. package/skills/domains/geoscience/SKILL.md +1 -1
  94. package/skills/domains/geoscience/climate-modeling-guide/SKILL.md +1 -1
  95. package/skills/domains/geoscience/climate-science-guide/SKILL.md +1 -1
  96. package/skills/domains/geoscience/gis-remote-sensing-guide/SKILL.md +1 -1
  97. package/skills/domains/geoscience/satellite-remote-sensing/SKILL.md +1 -1
  98. package/skills/domains/geoscience/seismology-data-guide/SKILL.md +1 -1
  99. package/skills/domains/humanities/SKILL.md +1 -1
  100. package/skills/domains/humanities/digital-humanities-guide/SKILL.md +1 -1
  101. package/skills/domains/humanities/ethical-philosophy-guide/SKILL.md +1 -1
  102. package/skills/domains/humanities/philosophy-research-guide/SKILL.md +1 -1
  103. package/skills/domains/law/SKILL.md +3 -2
  104. package/skills/domains/law/legal-nlp-guide/SKILL.md +1 -1
  105. package/skills/domains/law/legal-research-guide/SKILL.md +1 -1
  106. package/skills/domains/law/patent-analysis-guide/SKILL.md +1 -1
  107. package/skills/domains/law/regulatory-compliance-guide/SKILL.md +1 -1
  108. package/skills/domains/law/uk-legislation-api/SKILL.md +179 -0
  109. package/skills/domains/math/SKILL.md +1 -1
  110. package/skills/domains/math/numerical-methods-guide/SKILL.md +1 -1
  111. package/skills/domains/math/symbolic-computation-guide/SKILL.md +1 -1
  112. package/skills/domains/math/topology-data-analysis/SKILL.md +1 -1
  113. package/skills/domains/pharma/SKILL.md +1 -1
  114. package/skills/domains/pharma/clinical-pharmacology-guide/SKILL.md +1 -1
  115. package/skills/domains/pharma/clinical-trial-design-guide/SKILL.md +1 -1
  116. package/skills/domains/pharma/drug-development-guide/SKILL.md +1 -1
  117. package/skills/domains/pharma/drug-target-interaction/SKILL.md +1 -1
  118. package/skills/domains/pharma/pharmacovigilance-guide/SKILL.md +1 -1
  119. package/skills/domains/physics/SKILL.md +1 -1
  120. package/skills/domains/physics/astrophysics-data-guide/SKILL.md +1 -1
  121. package/skills/domains/physics/computational-physics-guide/SKILL.md +1 -1
  122. package/skills/domains/physics/particle-physics-guide/SKILL.md +1 -1
  123. package/skills/domains/physics/quantum-computing-guide/SKILL.md +1 -1
  124. package/skills/domains/social-science/SKILL.md +1 -1
  125. package/skills/domains/social-science/network-analysis-guide/SKILL.md +1 -1
  126. package/skills/domains/social-science/social-research-methods/SKILL.md +1 -1
  127. package/skills/domains/social-science/survey-research-guide/SKILL.md +1 -1
  128. package/skills/literature/discovery/SKILL.md +1 -1
  129. package/skills/literature/discovery/citation-alert-guide/SKILL.md +1 -1
  130. package/skills/literature/discovery/conference-proceedings-guide/SKILL.md +1 -1
  131. package/skills/literature/discovery/literature-mapping-guide/SKILL.md +1 -1
  132. package/skills/literature/discovery/rss-paper-feeds/SKILL.md +1 -1
  133. package/skills/literature/discovery/semantic-scholar-recs-guide/SKILL.md +1 -1
  134. package/skills/literature/discovery/zotero-arxiv-daily-guide/SKILL.md +3 -3
  135. package/skills/literature/fulltext/SKILL.md +3 -2
  136. package/skills/literature/fulltext/arxiv-latex-source/SKILL.md +195 -0
  137. package/skills/literature/fulltext/interlibrary-loan-guide/SKILL.md +1 -1
  138. package/skills/literature/fulltext/open-access-guide/SKILL.md +1 -1
  139. package/skills/literature/fulltext/open-access-mining-guide/SKILL.md +1 -1
  140. package/skills/literature/fulltext/preprint-servers-guide/SKILL.md +1 -1
  141. package/skills/literature/metadata/SKILL.md +1 -1
  142. package/skills/literature/metadata/altmetrics-guide/SKILL.md +1 -1
  143. package/skills/literature/metadata/doi-resolution-guide/SKILL.md +1 -1
  144. package/skills/literature/metadata/h-index-guide/SKILL.md +1 -1
  145. package/skills/literature/metadata/journal-metrics-guide/SKILL.md +1 -1
  146. package/skills/literature/metadata/orcid-integration-guide/SKILL.md +1 -1
  147. package/skills/literature/search/SKILL.md +2 -3
  148. package/skills/literature/search/arxiv-batch-reporting/SKILL.md +2 -2
  149. package/skills/literature/search/boolean-search-guide/SKILL.md +1 -1
  150. package/skills/literature/search/citation-chaining-guide/SKILL.md +1 -1
  151. package/skills/literature/search/database-comparison-guide/SKILL.md +1 -1
  152. package/skills/literature/search/deep-literature-search/SKILL.md +2 -2
  153. package/skills/literature/search/google-scholar-guide/SKILL.md +1 -1
  154. package/skills/literature/search/mesh-terms-guide/SKILL.md +1 -1
  155. package/skills/literature/search/systematic-search-strategy/SKILL.md +1 -1
  156. package/skills/research/automation/SKILL.md +1 -1
  157. package/skills/research/automation/data-collection-automation/SKILL.md +1 -1
  158. package/skills/research/automation/datagen-research-guide/SKILL.md +1 -0
  159. package/skills/research/automation/mle-agent-guide/SKILL.md +1 -0
  160. package/skills/research/automation/paper-to-agent-guide/SKILL.md +1 -0
  161. package/skills/research/automation/research-workflow-automation/SKILL.md +1 -1
  162. package/skills/research/deep-research/SKILL.md +1 -1
  163. package/skills/research/deep-research/auto-deep-research-guide/SKILL.md +1 -0
  164. package/skills/research/deep-research/meta-synthesis-guide/SKILL.md +1 -1
  165. package/skills/research/deep-research/scoping-review-guide/SKILL.md +1 -1
  166. package/skills/research/deep-research/systematic-review-guide/SKILL.md +1 -1
  167. package/skills/research/funding/SKILL.md +1 -1
  168. package/skills/research/funding/eu-horizon-guide/SKILL.md +1 -1
  169. package/skills/research/funding/grant-budget-guide/SKILL.md +1 -1
  170. package/skills/research/funding/grant-writing-guide/SKILL.md +1 -1
  171. package/skills/research/funding/nsf-grant-guide/SKILL.md +1 -1
  172. package/skills/research/funding/open-science-guide/SKILL.md +1 -1
  173. package/skills/research/methodology/SKILL.md +2 -2
  174. package/skills/research/methodology/action-research-guide/SKILL.md +1 -1
  175. package/skills/research/methodology/claude-scientific-guide/SKILL.md +1 -0
  176. package/skills/research/methodology/experimental-design-guide/SKILL.md +1 -1
  177. package/skills/research/methodology/grounded-theory-guide/SKILL.md +1 -1
  178. package/skills/research/methodology/mixed-methods-guide/SKILL.md +1 -1
  179. package/skills/research/methodology/qualitative-research-guide/SKILL.md +2 -2
  180. package/skills/research/methodology/research-paper-kb/SKILL.md +2 -2
  181. package/skills/research/methodology/research-town-guide/SKILL.md +3 -3
  182. package/skills/research/methodology/scientify-idea-generation/SKILL.md +1 -1
  183. package/skills/research/paper-review/SKILL.md +2 -2
  184. package/skills/research/paper-review/automated-review-guide/SKILL.md +1 -1
  185. package/skills/research/paper-review/paper-reading-assistant/SKILL.md +1 -1
  186. package/skills/research/paper-review/peer-review-guide/SKILL.md +2 -2
  187. package/skills/research/paper-review/rebuttal-writing-guide/SKILL.md +1 -1
  188. package/skills/research/paper-review/review-response-guide/SKILL.md +1 -1
  189. package/skills/research/paper-review/scientify-write-review-paper/SKILL.md +1 -1
  190. package/skills/tools/code-exec/SKILL.md +1 -1
  191. package/skills/tools/code-exec/google-colab-guide/SKILL.md +1 -1
  192. package/skills/tools/code-exec/jupyter-notebook-guide/SKILL.md +1 -1
  193. package/skills/tools/code-exec/overleaf-cli-guide/SKILL.md +1 -1
  194. package/skills/tools/code-exec/python-reproducibility-guide/SKILL.md +1 -1
  195. package/skills/tools/code-exec/r-reproducibility-guide/SKILL.md +1 -1
  196. package/skills/tools/code-exec/sandbox-execution-guide/SKILL.md +1 -1
  197. package/skills/tools/diagram/SKILL.md +1 -1
  198. package/skills/tools/diagram/code-flow-visualizer/SKILL.md +1 -1
  199. package/skills/tools/diagram/excalidraw-diagram-guide/SKILL.md +1 -1
  200. package/skills/tools/diagram/mermaid-architect-guide/SKILL.md +1 -1
  201. package/skills/tools/diagram/plantuml-guide/SKILL.md +1 -1
  202. package/skills/tools/diagram/scientific-illustration-guide/SKILL.md +1 -1
  203. package/skills/tools/document/SKILL.md +1 -1
  204. package/skills/tools/document/large-document-reader/SKILL.md +2 -2
  205. package/skills/tools/document/markdown-academic-guide/SKILL.md +1 -1
  206. package/skills/tools/document/paper-parse-guide/SKILL.md +2 -2
  207. package/skills/tools/document/pdf-extraction-guide/SKILL.md +1 -1
  208. package/skills/tools/knowledge-graph/SKILL.md +2 -3
  209. package/skills/tools/knowledge-graph/citation-network-builder/SKILL.md +1 -1
  210. package/skills/tools/knowledge-graph/concept-map-generator/SKILL.md +1 -1
  211. package/skills/tools/knowledge-graph/ontology-design-guide/SKILL.md +1 -1
  212. package/skills/tools/knowledge-graph/rag-methodology-guide/SKILL.md +1 -1
  213. package/skills/tools/ocr-translate/SKILL.md +1 -1
  214. package/skills/tools/ocr-translate/handwriting-recognition-guide/SKILL.md +1 -1
  215. package/skills/tools/ocr-translate/latex-ocr-guide/SKILL.md +1 -1
  216. package/skills/tools/ocr-translate/multilingual-research-guide/SKILL.md +1 -1
  217. package/skills/tools/ocr-translate/zotero-pdf2zh-guide/SKILL.md +1 -0
  218. package/skills/tools/scraping/SKILL.md +1 -1
  219. package/skills/tools/scraping/dataset-finder-guide/SKILL.md +2 -2
  220. package/skills/tools/scraping/google-scholar-scraper/SKILL.md +1 -1
  221. package/skills/tools/scraping/repository-harvesting-guide/SKILL.md +1 -1
  222. package/skills/tools/scraping/web-scraping-ethics-guide/SKILL.md +1 -1
  223. package/skills/writing/citation/SKILL.md +1 -1
  224. package/skills/writing/citation/academic-citation-manager/SKILL.md +2 -2
  225. package/skills/writing/citation/bibtex-management-guide/SKILL.md +1 -1
  226. package/skills/writing/citation/citation-style-guide/SKILL.md +1 -1
  227. package/skills/writing/citation/mendeley-api/SKILL.md +2 -2
  228. package/skills/writing/citation/obsidian-citation-guide/SKILL.md +1 -0
  229. package/skills/writing/citation/obsidian-zotero-guide/SKILL.md +1 -0
  230. package/skills/writing/citation/papersgpt-zotero-guide/SKILL.md +1 -0
  231. package/skills/writing/citation/reference-manager-comparison/SKILL.md +1 -1
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  233. package/skills/writing/citation/zotero-reference-guide/SKILL.md +1 -0
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  238. package/skills/writing/composition/literature-review-writing/SKILL.md +1 -1
  239. package/skills/writing/composition/methods-section-guide/SKILL.md +1 -1
  240. package/skills/writing/composition/response-to-reviewers/SKILL.md +1 -1
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  242. package/skills/writing/latex/SKILL.md +1 -1
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  247. package/skills/writing/latex/overleaf-collaboration-guide/SKILL.md +1 -1
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  251. package/skills/writing/polish/academic-tone-guide/SKILL.md +1 -1
  252. package/skills/writing/polish/academic-translation-guide/SKILL.md +1 -1
  253. package/skills/writing/polish/ai-writing-humanizer/SKILL.md +1 -1
  254. package/skills/writing/polish/conciseness-editing-guide/SKILL.md +1 -1
  255. package/skills/writing/polish/grammar-checker-guide/SKILL.md +1 -1
  256. package/skills/writing/polish/paper-polish-guide/SKILL.md +2 -2
  257. package/skills/writing/polish/plagiarism-detection-guide/SKILL.md +1 -1
  258. package/skills/writing/templates/SKILL.md +1 -1
  259. package/skills/writing/templates/beamer-presentation-guide/SKILL.md +1 -1
  260. package/skills/writing/templates/conference-paper-template/SKILL.md +1 -1
  261. package/skills/writing/templates/novathesis-guide/SKILL.md +1 -0
  262. package/skills/writing/templates/thesis-template-guide/SKILL.md +1 -1
  263. package/src/tools/arxiv.ts +78 -30
  264. package/src/tools/biorxiv.ts +142 -0
  265. package/src/tools/crossref.ts +60 -22
  266. package/src/tools/datacite.ts +188 -0
  267. package/src/tools/dblp.ts +125 -0
  268. package/src/tools/doaj.ts +82 -0
  269. package/src/tools/europe-pmc.ts +159 -0
  270. package/src/tools/hal.ts +118 -0
  271. package/src/tools/inspire-hep.ts +165 -0
  272. package/src/tools/openaire.ts +158 -0
  273. package/src/tools/openalex.ts +20 -15
  274. package/src/tools/opencitations.ts +103 -0
  275. package/src/tools/orcid.ts +136 -0
  276. package/src/tools/osf-preprints.ts +104 -0
  277. package/src/tools/pubmed.ts +19 -13
  278. package/src/tools/ror.ts +118 -0
  279. package/src/tools/unpaywall.ts +12 -6
  280. package/src/tools/util.ts +141 -0
  281. package/src/tools/zenodo.ts +154 -0
  282. package/mcp-configs/academic-db/ChatSpatial.json +0 -17
  283. package/mcp-configs/academic-db/academia-mcp.json +0 -17
  284. package/mcp-configs/academic-db/academic-paper-explorer.json +0 -17
  285. package/mcp-configs/academic-db/academic-search-mcp-server.json +0 -17
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@@ -1,476 +0,0 @@
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- {
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- "version": "1.1.0",
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- "generated": "2026-03-10",
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- "categories": [
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- "academic-db",
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- "ai-platform",
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- "browser",
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- "cloud-docs",
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- "communication",
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- "data-platform",
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- "database",
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- "dev-platform",
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- "email",
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- "note-knowledge",
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- "reference-mgr",
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- "repository"
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- ],
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- "configs": [
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- {
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- "id": "ChatSpatial",
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- "name": "ChatSpatial",
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- "category": "academic-db",
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- "file": "academic-db/ChatSpatial.json"
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- },
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- {
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- "id": "academia-mcp",
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- "name": "Academia MCP",
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- "category": "academic-db",
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- "file": "academic-db/academia-mcp.json"
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- },
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- {
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- "id": "academic-paper-explorer",
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- "name": "Academic Paper Explorer",
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- "category": "academic-db",
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- "file": "academic-db/academic-paper-explorer.json"
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- },
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- {
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- "id": "academic-search-mcp-server",
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- "name": "Academic Paper Search",
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- "category": "academic-db",
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- "file": "academic-db/academic-search-mcp-server.json"
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- },
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- {
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- "id": "agentinterviews-mcp",
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- "name": "Agent Interviews",
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- "category": "academic-db",
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- "file": "academic-db/agentinterviews-mcp.json"
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- },
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- {
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- "id": "all-in-mcp",
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- "name": "All-in MCP",
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- "category": "academic-db",
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- "file": "academic-db/all-in-mcp.json"
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- },
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- {
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- "id": "apple-health-mcp",
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- "name": "Apple Health Data",
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- "category": "academic-db",
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- "file": "academic-db/apple-health-mcp.json"
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- },
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- {
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- "id": "arxiv-latex-mcp",
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- "name": "arXiv LaTeX Source",
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- "category": "academic-db",
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- "file": "academic-db/arxiv-latex-mcp.json"
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- },
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- {
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- "id": "arxiv-mcp-server",
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- "name": "arXiv Search",
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- "category": "academic-db",
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- "file": "academic-db/arxiv-mcp-server.json"
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- },
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- {
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- "id": "bgpt-mcp",
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- {
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- {
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- "category": "academic-db",
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- "file": "academic-db/biothings-mcp.json"
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- },
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- {
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- {
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- "name": "ClinicalTrials.gov",
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- {
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- "name": "Deep Research",
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- "category": "academic-db",
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- "file": "academic-db/deep-research-mcp.json"
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- },
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- {
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- "id": "dicom-mcp",
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- "name": "DICOM Medical Imaging",
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- "file": "academic-db/dicom-mcp.json"
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- },
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- {
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- "id": "enrichr-mcp-server",
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- "name": "Enrichr Gene Set Analysis",
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- "category": "academic-db",
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- },
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- {
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- "id": "fec-mcp-server",
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- "name": "FEC Campaign Finance",
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- "category": "academic-db",
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- {
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- "id": "fhir-mcp",
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- "name": "FHIR Healthcare API",
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- "file": "academic-db/fhir-mcp.json"
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- },
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- {
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- "id": "fhir-mcp-server-themomentum",
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- "name": "FHIR Patient History",
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- "category": "academic-db",
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- "file": "academic-db/fhir-mcp-server-themomentum.json"
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- },
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- {
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- "id": "gget-mcp",
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- "name": "gget Bioinformatics",
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- "category": "academic-db",
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- "file": "academic-db/gget-mcp.json"
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- },
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- {
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- "id": "google-researcher-mcp",
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- "name": "Google Researcher",
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- "category": "academic-db",
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- "file": "academic-db/google-researcher-mcp.json"
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- {
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- "id": "idea-reality-mcp",
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- "name": "Idea Reality Check",
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- "category": "academic-db",
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- "file": "academic-db/idea-reality-mcp.json"
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- {
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- "id": "legiscan-mcp",
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- "name": "LegiScan",
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- "category": "academic-db",
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- "file": "academic-db/legiscan-mcp.json"
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- },
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- {
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- "id": "lex",
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- "name": "Lex UK Legal API",
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- "category": "academic-db",
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- "file": "academic-db/lex.json"
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- },
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- {
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- "id": "Adaptive-Graph-of-Thoughts-MCP-server",
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- "name": "Adaptive Graph of Thoughts MCP Server",
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- "category": "ai-platform",
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- "file": "ai-platform/Adaptive-Graph-of-Thoughts-MCP-server.json"
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- },
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- {
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- "id": "ai-counsel",
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- "name": "AI Counsel",
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- "category": "ai-platform",
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- "file": "ai-platform/ai-counsel.json"
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- },
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- {
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- "id": "atlas-mcp-server",
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- "name": "Atlas MCP Server",
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- "category": "ai-platform",
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- "file": "ai-platform/atlas-mcp-server.json"
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- },
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- {
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- "id": "counsel-mcp",
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- "name": "Counsel MCP",
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- "category": "ai-platform",
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- "file": "ai-platform/counsel-mcp.json"
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- },
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- {
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- "id": "cross-llm-mcp",
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- "name": "Cross-LLM MCP",
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- "category": "ai-platform",
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- "file": "ai-platform/cross-llm-mcp.json"
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- },
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- {
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- "id": "gptr-mcp",
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- "name": "GPTR MCP",
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- "category": "ai-platform",
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- "file": "ai-platform/gptr-mcp.json"
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- },
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- {
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- "id": "decipher-research-agent",
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- "name": "Decipher Research Agent",
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- "category": "browser",
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- "file": "browser/decipher-research-agent.json"
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- },
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- {
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- "id": "deep-research",
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- "name": "Deep Research",
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- "category": "browser",
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- "file": "browser/deep-research.json"
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- {
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- "id": "everything-claude-code",
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- "name": "Everything Claude Code",
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- "category": "browser",
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- "file": "browser/everything-claude-code.json"
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- },
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- {
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- "id": "gpt-researcher",
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- "name": "GPT Researcher",
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- "category": "browser",
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- "file": "browser/gpt-researcher.json"
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- "id": "heurist-agent-framework",
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- "name": "Heurist Agent Framework",
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- "file": "browser/heurist-agent-framework.json"
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- {
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- "id": "confluence-mcp",
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- "name": "Confluence MCP",
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- "category": "cloud-docs",
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- "file": "cloud-docs/confluence-mcp.json"
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- {
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- "id": "google-drive-mcp",
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- "name": "Google Drive MCP",
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- "category": "cloud-docs",
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- "file": "cloud-docs/google-drive-mcp.json"
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- {
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- "id": "notion-mcp",
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- "name": "Notion MCP",
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- "category": "cloud-docs",
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- "file": "cloud-docs/notion-mcp.json"
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- {
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- "id": "discord-mcp",
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- "name": "Discord MCP",
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- "category": "communication",
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- "file": "communication/discord-mcp.json"
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- },
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- {
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- "id": "slack-mcp",
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- "name": "Slack MCP",
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- "category": "communication",
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- "file": "communication/slack-mcp.json"
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- {
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- "id": "telegram-mcp",
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- "name": "Telegram MCP",
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- "category": "communication",
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- {
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- "id": "4everland-hosting-mcp",
273
- "name": "4EVERLAND Hosting MCP",
274
- "category": "data-platform",
275
- "file": "data-platform/4everland-hosting-mcp.json"
276
- },
277
- {
278
- "id": "context-keeper",
279
- "name": "Context Keeper",
280
- "category": "data-platform",
281
- "file": "data-platform/context-keeper.json"
282
- },
283
- {
284
- "id": "context7",
285
- "name": "Context7",
286
- "category": "data-platform",
287
- "file": "data-platform/context7.json"
288
- },
289
- {
290
- "id": "contextstream-mcp",
291
- "name": "ContextStream MCP",
292
- "category": "data-platform",
293
- "file": "data-platform/contextstream-mcp.json"
294
- },
295
- {
296
- "id": "email-mcp",
297
- "name": "Email MCP",
298
- "category": "data-platform",
299
- "file": "data-platform/email-mcp.json"
300
- },
301
- {
302
- "id": "neo4j-mcp",
303
- "name": "Neo4j MCP",
304
- "category": "database",
305
- "file": "database/neo4j-mcp.json"
306
- },
307
- {
308
- "id": "postgres-mcp",
309
- "name": "PostgreSQL MCP",
310
- "category": "database",
311
- "file": "database/postgres-mcp.json"
312
- },
313
- {
314
- "id": "sqlite-mcp",
315
- "name": "SQLite MCP",
316
- "category": "database",
317
- "file": "database/sqlite-mcp.json"
318
- },
319
- {
320
- "id": "github-mcp",
321
- "name": "GitHub MCP",
322
- "category": "dev-platform",
323
- "file": "dev-platform/github-mcp.json"
324
- },
325
- {
326
- "id": "gitlab-mcp",
327
- "name": "GitLab MCP",
328
- "category": "dev-platform",
329
- "file": "dev-platform/gitlab-mcp.json"
330
- },
331
- {
332
- "id": "gmail-mcp",
333
- "name": "Gmail MCP",
334
- "category": "email",
335
- "file": "email/gmail-mcp.json"
336
- },
337
- {
338
- "id": "imap-smtp-mcp",
339
- "name": "IMAP/SMTP Email MCP",
340
- "category": "email",
341
- "file": "email/email-mcp.json"
342
- },
343
- {
344
- "id": "ApeRAG",
345
- "name": "ApeRAG",
346
- "category": "note-knowledge",
347
- "file": "note-knowledge/ApeRAG.json"
348
- },
349
- {
350
- "id": "In-Memoria",
351
- "name": "In Memoria",
352
- "category": "note-knowledge",
353
- "file": "note-knowledge/In-Memoria.json"
354
- },
355
- {
356
- "id": "agent-memory",
357
- "name": "Agent Memory",
358
- "category": "note-knowledge",
359
- "file": "note-knowledge/agent-memory.json"
360
- },
361
- {
362
- "id": "aimemo",
363
- "name": "AIMemo",
364
- "category": "note-knowledge",
365
- "file": "note-knowledge/aimemo.json"
366
- },
367
- {
368
- "id": "biel-mcp",
369
- "name": "Biel MCP",
370
- "category": "note-knowledge",
371
- "file": "note-knowledge/biel-mcp.json"
372
- },
373
- {
374
- "id": "cognee",
375
- "name": "Cognee",
376
- "category": "note-knowledge",
377
- "file": "note-knowledge/cognee.json"
378
- },
379
- {
380
- "id": "context-awesome",
381
- "name": "Context Awesome",
382
- "category": "note-knowledge",
383
- "file": "note-knowledge/context-awesome.json"
384
- },
385
- {
386
- "id": "context-mcp",
387
- "name": "Context MCP",
388
- "category": "note-knowledge",
389
- "file": "note-knowledge/context-mcp.json"
390
- },
391
- {
392
- "id": "conversation-handoff-mcp",
393
- "name": "Conversation Handoff MCP",
394
- "category": "note-knowledge",
395
- "file": "note-knowledge/conversation-handoff-mcp.json"
396
- },
397
- {
398
- "id": "cortex",
399
- "name": "Cortex",
400
- "category": "note-knowledge",
401
- "file": "note-knowledge/cortex.json"
402
- },
403
- {
404
- "id": "devrag",
405
- "name": "DevRAG",
406
- "category": "note-knowledge",
407
- "file": "note-knowledge/devrag.json"
408
- },
409
- {
410
- "id": "easy-obsidian-mcp",
411
- "name": "Easy Obsidian MCP",
412
- "category": "note-knowledge",
413
- "file": "note-knowledge/easy-obsidian-mcp.json"
414
- },
415
- {
416
- "id": "engram",
417
- "name": "Engram",
418
- "category": "note-knowledge",
419
- "file": "note-knowledge/engram.json"
420
- },
421
- {
422
- "id": "gnosis-mcp",
423
- "name": "Gnosis MCP",
424
- "category": "note-knowledge",
425
- "file": "note-knowledge/gnosis-mcp.json"
426
- },
427
- {
428
- "id": "graphlit-mcp-server",
429
- "name": "Graphlit MCP Server",
430
- "category": "note-knowledge",
431
- "file": "note-knowledge/graphlit-mcp-server.json"
432
- },
433
- {
434
- "id": "arxiv-cli",
435
- "name": "arXiv CLI",
436
- "category": "reference-mgr",
437
- "file": "reference-mgr/arxiv-cli.json"
438
- },
439
- {
440
- "id": "arxiv-search-mcp",
441
- "name": "arXiv Search MCP",
442
- "category": "reference-mgr",
443
- "file": "reference-mgr/arxiv-search-mcp.json"
444
- },
445
- {
446
- "id": "chiken",
447
- "name": "Chiken",
448
- "category": "reference-mgr",
449
- "file": "reference-mgr/chiken.json"
450
- },
451
- {
452
- "id": "claude-scholar",
453
- "name": "Claude Scholar",
454
- "category": "reference-mgr",
455
- "file": "reference-mgr/claude-scholar.json"
456
- },
457
- {
458
- "id": "devonthink-mcp",
459
- "name": "DEVONthink MCP",
460
- "category": "reference-mgr",
461
- "file": "reference-mgr/devonthink-mcp.json"
462
- },
463
- {
464
- "id": "dataverse-mcp",
465
- "name": "Dataverse MCP",
466
- "category": "repository",
467
- "file": "repository/dataverse-mcp.json"
468
- },
469
- {
470
- "id": "huggingface-mcp",
471
- "name": "Hugging Face MCP",
472
- "category": "repository",
473
- "file": "repository/huggingface-mcp.json"
474
- }
475
- ]
476
- }
@@ -1,33 +0,0 @@
1
- {
2
- "id": "dataverse-mcp",
3
- "name": "Dataverse MCP",
4
- "description": "Dataverse research data repository — search datasets, access metadata, download files, and explore collections in Harvard Dataverse and other installations.",
5
- "category": "repository",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-dataverse",
9
- "command": "npm install mcp-dataverse"
10
- },
11
- "config": {
12
- "env": {
13
- "DATAVERSE_URL": {
14
- "description": "Dataverse installation URL (e.g. https://dataverse.harvard.edu)",
15
- "required": true
16
- },
17
- "DATAVERSE_API_TOKEN": {
18
- "description": "Dataverse API token for authenticated access",
19
- "required": false
20
- }
21
- }
22
- },
23
- "tools": [
24
- "search_datasets",
25
- "get_dataset",
26
- "list_files",
27
- "download_file",
28
- "get_metadata",
29
- "list_collections"
30
- ],
31
- "verified": false,
32
- "source": "https://github.com/codeurali/mcp-dataverse"
33
- }
@@ -1,29 +0,0 @@
1
- {
2
- "id": "huggingface-mcp",
3
- "name": "Hugging Face MCP",
4
- "description": "Hugging Face Spaces and model access — search models, explore datasets, interact with Spaces, and retrieve model cards for ML research.",
5
- "category": "repository",
6
- "install": {
7
- "runtime": "node",
8
- "package": "mcp-hfspace",
9
- "command": "npm install mcp-hfspace"
10
- },
11
- "config": {
12
- "env": {
13
- "HF_TOKEN": {
14
- "description": "Hugging Face access token for authenticated API access",
15
- "required": false
16
- }
17
- }
18
- },
19
- "tools": [
20
- "search_models",
21
- "get_model_info",
22
- "search_datasets",
23
- "get_dataset_info",
24
- "list_spaces",
25
- "call_space_api"
26
- ],
27
- "verified": false,
28
- "source": "https://github.com/evalstate/mcp-hfspace"
29
- }
@@ -1,84 +0,0 @@
1
- ---
2
- name: xpert-bi-guide
3
- description: "AI business intelligence agent with NL-to-SQL and dashboards"
4
- metadata:
5
- openclaw:
6
- emoji: "📊"
7
- category: "domains"
8
- subcategory: "business"
9
- keywords: ["business intelligence", "NL-to-SQL", "dashboard", "data analysis", "BI agent", "analytics"]
10
- source: "https://github.com/xpert-ai/xpert"
11
- ---
12
-
13
- # Xpert BI Agent Guide
14
-
15
- ## Overview
16
-
17
- Xpert is an AI-powered business intelligence agent that converts natural language questions into SQL queries, generates interactive dashboards, and provides data-driven insights. Connects to databases (PostgreSQL, MySQL, BigQuery) and produces visualizations with explanations. Useful for researchers analyzing institutional data and business analytics.
18
-
19
- ## Features
20
-
21
- ```markdown
22
- ### Core Capabilities
23
- - **NL-to-SQL**: Convert questions to SQL queries
24
- - **Auto-visualization**: Choose appropriate chart types
25
- - **Dashboard generation**: Multi-chart interactive dashboards
26
- - **Insight extraction**: Statistical findings from data
27
- - **Report generation**: Narrative reports with charts
28
-
29
- ### Supported Databases
30
- - PostgreSQL, MySQL, SQLite
31
- - BigQuery, Snowflake, Redshift
32
- - CSV/Excel files (auto-loaded to SQLite)
33
- ```
34
-
35
- ## Usage
36
-
37
- ```python
38
- from xpert import XpertBI
39
-
40
- bi = XpertBI(
41
- database_url="postgresql://user:pass@localhost/research_db",
42
- llm_provider="anthropic",
43
- )
44
-
45
- # Natural language query
46
- result = bi.ask(
47
- "What is the publication trend by department over "
48
- "the last 5 years?"
49
- )
50
-
51
- print(result.sql) # Generated SQL query
52
- print(result.data) # Query results as DataFrame
53
- result.chart.save("pub_trend.png") # Auto-generated chart
54
- print(result.insight) # "Publications increased 23% overall..."
55
- ```
56
-
57
- ## Dashboard Generation
58
-
59
- ```python
60
- # Generate multi-chart dashboard
61
- dashboard = bi.create_dashboard(
62
- title="Research Output Analysis",
63
- questions=[
64
- "Publications per year by department",
65
- "Top 10 authors by citation count",
66
- "Funding amount vs publication output correlation",
67
- "Journal distribution of publications",
68
- ],
69
- )
70
-
71
- dashboard.save("research_dashboard.html")
72
- ```
73
-
74
- ## Use Cases
75
-
76
- 1. **Research analytics**: Analyze publication and citation data
77
- 2. **Institutional reporting**: Department-level research metrics
78
- 3. **Grant analysis**: Funding patterns and outcomes
79
- 4. **Data exploration**: Quick BI on research databases
80
- 5. **Teaching**: Demonstrate data analysis concepts
81
-
82
- ## References
83
-
84
- - [Xpert GitHub](https://github.com/xpert-ai/xpert)
@@ -1,74 +0,0 @@
1
- ---
2
- name: edumcp-guide
3
- description: "MCP server for educational content and learning management"
4
- metadata:
5
- openclaw:
6
- emoji: "🎓"
7
- category: "domains"
8
- subcategory: "education"
9
- keywords: ["education MCP", "learning management", "course content", "educational AI", "tutoring", "assessment"]
10
- source: "wentor-research-plugins"
11
- ---
12
-
13
- # EduMCP Guide
14
-
15
- ## Overview
16
-
17
- EduMCP is an MCP server that provides educational content management and learning assistance capabilities to AI agents. It enables course content retrieval, quiz generation, learning progress tracking, and adaptive tutoring workflows. Designed for educational researchers and EdTech developers building AI-powered learning systems.
18
-
19
- ## MCP Configuration
20
-
21
- ```json
22
- {
23
- "mcpServers": {
24
- "edumcp": {
25
- "command": "npx",
26
- "args": ["@edumcp/mcp-server"],
27
- "env": {
28
- "CONTENT_PATH": "./course_materials"
29
- }
30
- }
31
- }
32
- }
33
- ```
34
-
35
- ## Features
36
-
37
- ```markdown
38
- ### Content Management
39
- - Course material indexing and retrieval
40
- - Lecture note search (full-text + semantic)
41
- - Syllabus parsing and topic extraction
42
- - Resource recommendation by topic
43
-
44
- ### Assessment Generation
45
- - Quiz/exam question generation from content
46
- - Multiple question types (MCQ, short answer, essay)
47
- - Difficulty calibration
48
- - Answer key generation with explanations
49
-
50
- ### Learning Analytics
51
- - Student progress tracking
52
- - Knowledge gap identification
53
- - Learning path recommendations
54
- - Performance analytics
55
-
56
- ### Tutoring Support
57
- - Concept explanation at multiple levels
58
- - Step-by-step problem solving
59
- - Misconception detection
60
- - Socratic questioning
61
- ```
62
-
63
- ## Use Cases
64
-
65
- 1. **Course design**: AI-assisted curriculum development
66
- 2. **Assessment**: Automated quiz and exam generation
67
- 3. **Tutoring**: Adaptive explanation and guidance
68
- 4. **Analytics**: Learning progress analysis
69
- 5. **Research**: Educational AI system development
70
-
71
- ## References
72
-
73
- - [EduMCP GitHub](https://github.com/edumcp/edumcp)
74
- - [MCP Specification](https://modelcontextprotocol.io/)