@wentorai/research-plugins 1.3.1 → 1.4.0

package/index.ts

@@ -1,16 +1,26 @@
 import type { OpenClawPluginApi } from "openclaw/plugin-sdk";
-import { createSemanticScholarTools } from "./src/tools/semantic-scholar.js";
 import { createOpenAlexTools } from "./src/tools/openalex.js";
 import { createCrossRefTools } from "./src/tools/crossref.js";
 import { createArxivTools } from "./src/tools/arxiv.js";
 import { createPubMedTools } from "./src/tools/pubmed.js";
 import { createUnpaywallTools } from "./src/tools/unpaywall.js";
+import { createEuropePmcTools } from "./src/tools/europe-pmc.js";
+import { createOpenCitationsTools } from "./src/tools/opencitations.js";
+import { createDoajTools } from "./src/tools/doaj.js";
+import { createDblpTools } from "./src/tools/dblp.js";
+import { createBiorxivTools } from "./src/tools/biorxiv.js";
+import { createOpenAireTools } from "./src/tools/openaire.js";
+import { createZenodoTools } from "./src/tools/zenodo.js";
+import { createOrcidTools } from "./src/tools/orcid.js";
+import { createInspireHepTools } from "./src/tools/inspire-hep.js";
+import { createHalTools } from "./src/tools/hal.js";
+import { createOsfPreprintsTools } from "./src/tools/osf-preprints.js";
+import { createDataCiteTools } from "./src/tools/datacite.js";
+import { createRorTools } from "./src/tools/ror.js";
+// ChemRxiv: REMOVED — blocked by Cloudflare WAF, returns HTML challenge instead of JSON
 
 export default function activate(api: OpenClawPluginApi) {
-  api.registerTool(
-    (ctx) => createSemanticScholarTools(ctx, api),
-    { names: ["search_papers", "get_paper", "get_citations"] },
-  );
+  // --- Existing tools ---
 
   api.registerTool(
     (ctx) => createOpenAlexTools(ctx, api),
@@ -36,4 +46,77 @@ export default function activate(api: OpenClawPluginApi) {
     (ctx) => createUnpaywallTools(ctx, api),
     { names: ["find_oa_version"] },
   );
+
+  // --- Phase 1: New free API tools ---
+
+  api.registerTool(
+    (ctx) => createEuropePmcTools(ctx, api),
+    { names: ["search_europe_pmc", "get_epmc_citations", "get_epmc_references"] },
+  );
+
+  api.registerTool(
+    (ctx) => createOpenCitationsTools(ctx, api),
+    { names: ["get_citations_open", "get_references_open", "get_citation_count"] },
+  );
+
+  api.registerTool(
+    (ctx) => createDoajTools(ctx, api),
+    { names: ["search_doaj"] },
+  );
+
+  api.registerTool(
+    (ctx) => createDblpTools(ctx, api),
+    { names: ["search_dblp", "search_dblp_author"] },
+  );
+
+  api.registerTool(
+    (ctx) => createBiorxivTools(ctx, api),
+    { names: ["search_biorxiv", "search_medrxiv", "get_preprint_by_doi"] },
+  );
+
+  api.registerTool(
+    (ctx) => createOpenAireTools(ctx, api),
+    { names: ["search_openaire"] },
+  );
+
+  // --- Phase 2: Domain-specific tools ---
+
+  api.registerTool(
+    (ctx) => createZenodoTools(ctx, api),
+    { names: ["search_zenodo", "get_zenodo_record"] },
+  );
+
+  api.registerTool(
+    (ctx) => createOrcidTools(ctx, api),
+    { names: ["search_orcid", "get_orcid_works"] },
+  );
+
+  api.registerTool(
+    (ctx) => createInspireHepTools(ctx, api),
+    { names: ["search_inspire", "get_inspire_paper"] },
+  );
+
+  api.registerTool(
+    (ctx) => createHalTools(ctx, api),
+    { names: ["search_hal"] },
+  );
+
+  api.registerTool(
+    (ctx) => createOsfPreprintsTools(ctx, api),
+    { names: ["search_osf_preprints"] },
+  );
+
+  // --- Phase 3: Infrastructure tools ---
+
+  api.registerTool(
+    (ctx) => createDataCiteTools(ctx, api),
+    { names: ["search_datacite", "resolve_datacite_doi"] },
+  );
+
+  api.registerTool(
+    (ctx) => createRorTools(ctx, api),
+    { names: ["search_ror"] },
+  );
+
+  // ChemRxiv: blocked by Cloudflare — moved to Layer 2 (Browser RPA)
 }

package/openclaw.plugin.json

@@ -1,8 +1,8 @@
 {
   "id": "research-plugins",
-  "version": "1.3.1",
+  "version": "1.4.0",
   "name": "Research Plugins",
-  "description": "431 academic research skills, 6 agent tools, 150 MCP configs & 6 curated lists for Research-Claw",
+  "description": "438 academic research skills, 34 agent tools across 18 API modules & 6 curated lists for Research-Claw",
   "skills": [
     "./skills/analysis",
     "./skills/domains",
@@ -14,15 +14,6 @@
   "configSchema": {
     "type": "object",
     "additionalProperties": false,
-    "properties": {
-      "semanticScholarApiKey": { "type": "string" }
-    }
-  },
-  "uiHints": {
-    "semanticScholarApiKey": {
-      "label": "Semantic Scholar API Key (optional)",
-      "help": "Get free key from semanticscholar.org for higher rate limits.",
-      "sensitive": true
-    }
+    "properties": {}
   }
 }

package/package.json

@@ -1,8 +1,8 @@
 {
   "name": "@wentorai/research-plugins",
-  "version": "1.3.1",
+  "version": "1.4.0",
   "type": "module",
-  "description": "431 academic research skills, 6 agent tools, 150 MCP configs, and 6 curated lists for Research-Claw and AI agents",
+  "description": "438 academic research skills, 34 agent tools across 18 API modules, and 6 curated lists for Research-Claw and AI agents",
   "keywords": [
     "agent-skills",
     "claude",
@@ -17,7 +17,6 @@
   ],
   "files": [
     "skills/",
-    "mcp-configs/",
     "curated/",
     "src/",
     "index.ts",
@@ -27,8 +26,7 @@
   ],
   "scripts": {
     "validate": "node --experimental-strip-types scripts/validate.ts",
-    "catalog": "node --experimental-strip-types scripts/catalog.ts",
-    "sync-registry": "node --experimental-strip-types scripts/sync-registry.ts"
+    "catalog": "node --experimental-strip-types scripts/catalog.ts"
   },
   "engines": {
     "node": ">=22.6.0"

package/skills/analysis/dataviz/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: dataviz-skills
-description: "14 data visualization skills (algorithm-visualizer, bokeh-visualization, chart-image-generator, color-accessibility...). Trigger: charts, plots, figures, publication-quality graphics. Design: one skill per tool with code templates and academic formatting conventions."
+description: "14 data visualization skills. Trigger: charts, plots, figures, publication-quality graphics. Design: one skill per tool with code templates and academic formatting conventions."
 ---
 
 # Data Visualization — 14 Skills

package/skills/analysis/dataviz/color-accessibility-guide/SKILL.md

@@ -3,7 +3,7 @@ name: color-accessibility-guide
 description: "Colorblind-friendly palettes and accessible visualization design"
 metadata:
   openclaw:
-    emoji: "palette"
+    emoji: "🎨"
     category: "analysis"
     subcategory: "dataviz"
     keywords: ["colorblind-friendly palette", "accessible color scheme", "visualization principles", "data-ink ratio"]

package/skills/analysis/dataviz/geospatial-viz-guide/SKILL.md

@@ -3,7 +3,7 @@ name: geospatial-viz-guide
 description: "Create maps, choropleths, and spatial data visualizations for research"
 metadata:
   openclaw:
-    emoji: "world_map"
+    emoji: "🗺️"
     category: "analysis"
     subcategory: "dataviz"
     keywords: ["geospatial", "choropleth", "maps", "GIS", "spatial visualization", "geopandas"]

package/skills/analysis/dataviz/interactive-viz-guide/SKILL.md

@@ -3,7 +3,7 @@ name: interactive-viz-guide
 description: "Interactive data visualization with Plotly, ECharts, and D3"
 metadata:
   openclaw:
-    emoji: "sparkle"
+    emoji: "✨"
     category: "analysis"
     subcategory: "dataviz"
     keywords: ["interactive visualization", "dynamic chart", "Plotly", "ECharts", "data visualization"]

package/skills/analysis/dataviz/network-visualization-guide/SKILL.md

@@ -3,7 +3,7 @@ name: network-visualization-guide
 description: "Visualize networks, graphs, citation maps, and relational data"
 metadata:
   openclaw:
-    emoji: "spider_web"
+    emoji: "🕸️"
     category: "analysis"
     subcategory: "dataviz"
     keywords: ["network visualization", "graph visualization", "citation network", "NetworkX", "social network", "node-link diagram"]

package/skills/analysis/dataviz/publication-figures-guide/SKILL.md

@@ -3,7 +3,7 @@ name: publication-figures-guide
 description: "Create journal-quality scientific figures with proper styling and accessibility"
 metadata:
   openclaw:
-    emoji: "art"
+    emoji: "🎨"
     category: "analysis"
     subcategory: "dataviz"
     keywords: ["scientific figure creation", "publication quality figure", "figure standards", "colorblind-friendly palette", "data visualization"]

package/skills/analysis/econometrics/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: econometrics-skills
-description: "12 econometrics skills (causal-inference, econml-causal, iv-regression, mostly-harmless...). Trigger: causal analysis, regression models, treatment effects, panel data. Design: method-centric guides with R/Python code and diagnostic tests."
+description: "12 econometrics skills. Trigger: causal analysis, regression models, treatment effects, panel data. Design: method-centric guides with R/Python code and diagnostic tests."
 ---
 
 # Econometrics — 12 Skills

package/skills/analysis/econometrics/causal-inference-guide/SKILL.md

@@ -3,7 +3,7 @@ name: causal-inference-guide
 description: "Causal inference methods including DiD, IV, RDD, and synthetic control"
 metadata:
   openclaw:
-    emoji: "link"
+    emoji: "🔗"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["difference-in-differences", "DiD", "causal inference", "instrumental variables", "IV estimation", "regression discontinuity"]

package/skills/analysis/econometrics/iv-regression-guide/SKILL.md

@@ -3,7 +3,7 @@ name: iv-regression-guide
 description: "Apply instrumental variables, 2SLS, and address endogeneity issues"
 metadata:
   openclaw:
-    emoji: "wrench"
+    emoji: "🔧"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["instrumental variables", "2SLS", "endogeneity", "IV regression", "causal inference", "econometrics"]

package/skills/analysis/econometrics/mostly-harmless-guide/SKILL.md

@@ -1,20 +1,13 @@
 ---
 name: mostly-harmless-guide
 description: "Replication code and guide for Mostly Harmless Econometrics methods"
-version: 1.0.0
-author: wentor-community
-source: https://github.com/vikjam/mostly-harmless-replication
 metadata:
   openclaw:
+    emoji: "📘"
     category: "analysis"
     subcategory: "econometrics"
-    keywords:
-      - econometrics
-      - causal-inference
-      - replication
-      - regression
-      - instrumental-variables
-      - difference-in-differences
+    keywords: ["econometrics", "causal-inference", "replication", "regression", "instrumental-variables", "difference-in-differences"]
+    source: "https://github.com/vikjam/mostly-harmless-replication"
 ---
 
 # Mostly Harmless Econometrics Guide

package/skills/analysis/econometrics/panel-data-analyst/SKILL.md

@@ -3,7 +3,7 @@ name: panel-data-analyst
 description: "Expert panel data regression analysis with fixed effects and GMM"
 metadata:
   openclaw:
-    emoji: "grid"
+    emoji: "📊"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["panel data", "fixed effects", "random effects", "GMM", "dynamic panel", "Hausman test"]

package/skills/analysis/econometrics/panel-data-guide/SKILL.md

@@ -3,7 +3,7 @@ name: panel-data-guide
 description: "Panel data analysis with fixed and random effects models"
 metadata:
   openclaw:
-    emoji: "table"
+    emoji: "📋"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["panel data", "fixed effects", "random effects", "Stata commands"]

package/skills/analysis/econometrics/stata-accounting-guide/SKILL.md

@@ -3,7 +3,7 @@ name: stata-accounting-guide
 description: "STATA code for empirical accounting and financial economics research"
 metadata:
   openclaw:
-    emoji: "ledger"
+    emoji: "📒"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["Stata", "accounting research", "Compustat", "CRSP", "earnings management", "financial economics"]

package/skills/analysis/econometrics/stata-analyst-guide/SKILL.md

@@ -3,7 +3,7 @@ name: stata-analyst-guide
 description: "Stata workflows for publication-ready sociology and social science research"
 metadata:
   openclaw:
-    emoji: "survey"
+    emoji: "📋"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["Stata", "sociology", "social science", "survey data", "regression", "publication tables"]

package/skills/analysis/econometrics/time-series-guide/SKILL.md

@@ -3,7 +3,7 @@ name: time-series-guide
 description: "Apply ARIMA, VAR, cointegration, and time series econometric methods"
 metadata:
   openclaw:
-    emoji: "chart_with_downwards_trend"
+    emoji: "📉"
     category: "analysis"
     subcategory: "econometrics"
     keywords: ["time series", "ARIMA", "VAR", "cointegration", "stationarity", "forecasting", "econometrics"]

package/skills/analysis/statistics/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: statistics-skills
-description: "10 statistical analysis skills (bayesian-statistics, data-anomaly-detection, hypothesis-testing, meta-analysis...). Trigger: statistical tests, Bayesian analysis, hypothesis testing, sampling. Design: method guides covering assumptions, code, and result interpretation."
+description: "10 statistical analysis skills. Trigger: statistical tests, Bayesian analysis, hypothesis testing, sampling. Design: method guides covering assumptions, code, and result interpretation."
 ---
 
 # Statistical Analysis — 10 Skills
@@ -12,7 +12,7 @@ Select the skill matching the user's need, then `read` its SKILL.md.
 | [bayesian-statistics-guide](./bayesian-statistics-guide/SKILL.md) | Bayesian inference methods including prior selection, MCMC, and model comparison |
 | [data-anomaly-detection](./data-anomaly-detection/SKILL.md) | Detect anomalies and outliers in research data using statistical methods |
 | [hypothesis-testing-guide](./hypothesis-testing-guide/SKILL.md) | Statistical hypothesis testing, power analysis, and significance reporting |
-| [meta-analysis-guide](./meta-analysis-guide/SKILL.md) | Conduct systematic meta-analyses with effect size pooling and heterogeneity a... |
+| [meta-analysis-guide](./meta-analysis-guide/SKILL.md) | Conduct systematic meta-analyses with effect size pooling and heterogeneity |
 | [ml-experiment-tracker](./ml-experiment-tracker/SKILL.md) | Plan reproducible ML experiment runs with parameters and metrics tracking |
 | [modeling-strategy-guide](./modeling-strategy-guide/SKILL.md) | Strategic statistical modeling, experimentation, and causal inference |
 | [nonparametric-tests-guide](./nonparametric-tests-guide/SKILL.md) | Apply Mann-Whitney, Kruskal-Wallis, and other nonparametric methods |

package/skills/analysis/statistics/bayesian-statistics-guide/SKILL.md

@@ -3,7 +3,7 @@ name: bayesian-statistics-guide
 description: "Bayesian inference methods including prior selection, MCMC, and model comparison"
 metadata:
   openclaw:
-    emoji: "triangular_ruler"
+    emoji: "📐"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["Bayesian statistics", "Bayesian inference", "MCMC", "sample size calculation", "prior selection"]

package/skills/analysis/statistics/meta-analysis-guide/SKILL.md

@@ -1,9 +1,9 @@
 ---
 name: meta-analysis-guide
-description: "Conduct systematic meta-analyses with effect size pooling and heterogeneity a..."
+description: "Conduct systematic meta-analyses with effect size pooling and heterogeneity"
 metadata:
   openclaw:
-    emoji: "balance_scale"
+    emoji: "⚖️"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["meta-analysis", "statistical synthesis", "heterogeneity", "effect size", "forest plot"]

package/skills/analysis/statistics/nonparametric-tests-guide/SKILL.md

@@ -3,7 +3,7 @@ name: nonparametric-tests-guide
 description: "Apply Mann-Whitney, Kruskal-Wallis, and other nonparametric methods"
 metadata:
   openclaw:
-    emoji: "chart_with_upwards_trend"
+    emoji: "📈"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["nonparametric tests", "Mann-Whitney", "Kruskal-Wallis", "Wilcoxon", "rank-based tests", "distribution-free"]

package/skills/analysis/statistics/power-analysis-guide/SKILL.md

@@ -3,7 +3,7 @@ name: power-analysis-guide
 description: "Sample size calculation and statistical power analysis guide"
 metadata:
   openclaw:
-    emoji: "target"
+    emoji: "🎯"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["sample size calculation", "power analysis", "effect size", "significance testing"]

package/skills/analysis/statistics/sem-guide/SKILL.md

@@ -3,7 +3,7 @@ name: sem-guide
 description: "Structural equation modeling with latent variables guide"
 metadata:
   openclaw:
-    emoji: "network"
+    emoji: "🌐"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["structural equation modeling", "SEM", "latent variable model", "multilevel model"]

package/skills/analysis/statistics/survival-analysis-guide/SKILL.md

@@ -3,7 +3,7 @@ name: survival-analysis-guide
 description: "Conduct Kaplan-Meier, Cox regression, and time-to-event analyses"
 metadata:
   openclaw:
-    emoji: "hourglass_flowing_sand"
+    emoji: "⏳"
     category: "analysis"
     subcategory: "statistics"
     keywords: ["survival analysis", "Kaplan-Meier", "Cox regression", "time-to-event", "hazard ratio", "censoring"]

package/skills/analysis/wrangling/SKILL.md

@@ -1,6 +1,6 @@
 ---
 name: wrangling-skills
-description: "10 data wrangling skills (csv-data-analyzer, data-cleaning-pipeline, data-cog, missing-data-handling...). Trigger: messy data, format conversion, missing values, data reshaping. Design: pipeline-oriented recipes for common data cleaning and transformation tasks."
+description: "10 data wrangling skills. Trigger: messy data, format conversion, missing values, data reshaping. Design: pipeline-oriented recipes for common data cleaning and transformation tasks."
 ---
 
 # Data Wrangling — 10 Skills

package/skills/analysis/wrangling/data-cleaning-pipeline/SKILL.md

@@ -3,7 +3,7 @@ name: data-cleaning-pipeline
 description: "Systematic data cleaning workflows for research datasets"
 metadata:
   openclaw:
-    emoji: "broom"
+    emoji: "🧹"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["data cleaning", "data quality", "missing values", "outlier detection", "data validation", "preprocessing"]

package/skills/analysis/wrangling/missing-data-handling/SKILL.md

@@ -3,7 +3,7 @@ name: missing-data-handling
 description: "Diagnose missing data patterns and apply appropriate imputation strategies"
 metadata:
   openclaw:
-    emoji: "jigsaw"
+    emoji: "🧩"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["missing value imputation", "missing data handling", "outlier detection", "data cleaning", "multiple imputation"]

package/skills/analysis/wrangling/questionnaire-design-guide/SKILL.md

@@ -3,7 +3,7 @@ name: questionnaire-design-guide
 description: "Questionnaire and survey design with Likert scales and coding"
 metadata:
   openclaw:
-    emoji: "clipboard"
+    emoji: "📋"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["questionnaire design", "survey design", "Likert scale", "data transformation"]

package/skills/analysis/wrangling/stata-data-cleaning/SKILL.md

@@ -3,7 +3,7 @@ name: stata-data-cleaning
 description: "Clean, transform, and validate messy research data using Stata"
 metadata:
   openclaw:
-    emoji: "broom"
+    emoji: "🧹"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["Stata", "data cleaning", "data wrangling", "missing values", "recoding", "validation"]

package/skills/analysis/wrangling/survey-data-processing/SKILL.md

@@ -3,7 +3,7 @@ name: survey-data-processing
 description: "Clean, recode, and prepare survey response data for analysis"
 metadata:
   openclaw:
-    emoji: "clipboard"
+    emoji: "📋"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["survey data", "questionnaire coding", "Likert scale", "response validation", "recoding", "survey analysis"]

package/skills/analysis/wrangling/text-mining-guide/SKILL.md

@@ -3,7 +3,7 @@ name: text-mining-guide
 description: "Apply NLP and text mining techniques to research text data"
 metadata:
   openclaw:
-    emoji: "mag"
+    emoji: "🔍"
     category: "analysis"
     subcategory: "wrangling"
     keywords: ["text mining", "NLP", "topic modeling", "sentiment analysis", "text preprocessing", "natural language processing"]

package/skills/domains/ai-ml/SKILL.md

@@ -1,9 +1,9 @@
 ---
 name: ai-ml-skills
-description: "26 ai & machine learning skills (ai-agent-papers, ai-model-benchmarking, anomaly-detection-papers, autonomous-agents-papers...). Trigger: ML experiments, model training, deep learning, NLP, computer vision. Design: covers frameworks, benchmarks, paper reproduction, and AI research workflows."
+description: "27 ai & machine learning skills. Trigger: ML experiments, model training, deep learning, NLP, computer vision. Design: covers frameworks, benchmarks, paper reproduction, and AI research workflows."
 ---
 
-# AI & Machine Learning — 26 Skills
+# AI & Machine Learning — 27 Skills
 
 Select the skill matching the user's need, then `read` its SKILL.md.
 
@@ -19,6 +19,7 @@ Select the skill matching the user's need, then `read` its SKILL.md.
 | [domain-adaptation-papers-guide](./domain-adaptation-papers-guide/SKILL.md) | Comprehensive collection of domain adaptation research papers |
 | [generative-ai-guide](./generative-ai-guide/SKILL.md) | Curated guide to generative AI covering LLMs and diffusion models |
 | [graph-learning-papers-guide](./graph-learning-papers-guide/SKILL.md) | Conference papers on graph neural networks and graph learning |
+| [huggingface-api](./huggingface-api/SKILL.md) | Search and discover ML models, datasets, and Spaces on Hugging Face |
 | [huggingface-inference-guide](./huggingface-inference-guide/SKILL.md) | Run NLP and CV model inference via Hugging Face free-tier API |
 | [keras-deep-learning](./keras-deep-learning/SKILL.md) | Build and debug deep learning models with Keras and TensorFlow backend |
 | [kolmogorov-arnold-networks-guide](./kolmogorov-arnold-networks-guide/SKILL.md) | Papers and tutorials on KAN learnable activation networks |

package/skills/domains/ai-ml/computer-vision-guide/SKILL.md

@@ -3,7 +3,7 @@ name: computer-vision-guide
 description: "Apply computer vision research methods, models, and evaluation tools"
 metadata:
   openclaw:
-    emoji: "eye"
+    emoji: "👁️"
     category: "domains"
     subcategory: "ai-ml"
     keywords: ["computer vision", "image classification", "object detection", "CNN", "vision transformer", "deep learning"]

package/skills/domains/ai-ml/generative-ai-guide/SKILL.md

@@ -8,6 +8,7 @@ metadata:
   openclaw:
     category: "domains"
     subcategory: "ai-ml"
+    emoji: "🤖"
     keywords:
       - generative-ai
       - large-language-models