@wentorai/research-plugins 1.0.0 → 1.2.0

package/mcp-configs/data-platform/mcp-stata.json

@@ -0,0 +1,21 @@
+{
+  "id": "mcp-stata",
+  "name": "Stata MCP",
+  "description": "Execute Stata commands and inspect data via MCP",
+  "category": "data-platform",
+  "install": {
+    "runtime": "python",
+    "package": "mcp-stata",
+    "command": "pip install mcp-stata"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "execute",
+    "get_data",
+    "describe"
+  ],
+  "verified": false,
+  "source": "https://github.com/hannesrudolph/mcp-stata"
+}

package/mcp-configs/data-platform/mcpstack-jupyter.json

@@ -0,0 +1,21 @@
+{
+  "id": "mcpstack-jupyter",
+  "name": "Jupyter MCP Stack",
+  "description": "Jupyter Notebook reproducible analysis via MCP",
+  "category": "data-platform",
+  "install": {
+    "runtime": "python",
+    "package": "mcpstack-jupyter",
+    "command": "pip install mcpstack-jupyter"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "execute_cell",
+    "create_notebook",
+    "get_output"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/mcpstack-jupyter"
+}

package/mcp-configs/data-platform/ml-mcp.json

@@ -0,0 +1,21 @@
+{
+  "id": "ml-mcp",
+  "name": "ML Training MCP",
+  "description": "ML model training, fine-tuning, and experimentation",
+  "category": "data-platform",
+  "install": {
+    "runtime": "python",
+    "package": "ml-mcp",
+    "command": "pip install ml-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "train",
+    "evaluate",
+    "predict"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/ml-mcp"
+}

package/mcp-configs/data-platform/nasdaq-data-link-mcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "nasdaq-data-link-mcp",
+  "name": "Nasdaq Data Link MCP",
+  "description": "Financial and economic datasets from Nasdaq",
+  "category": "data-platform",
+  "install": {
+    "runtime": "python",
+    "package": "nasdaq-data-link-mcp",
+    "command": "pip install nasdaq-data-link-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "get_dataset",
+    "search"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/nasdaq-data-link-mcp"
+}

package/mcp-configs/data-platform/numpy-mcp.json

@@ -0,0 +1,21 @@
+{
+  "id": "numpy-mcp",
+  "name": "NumPy MCP",
+  "description": "Numerical computations with NumPy via MCP",
+  "category": "data-platform",
+  "install": {
+    "runtime": "python",
+    "package": "numpy-mcp",
+    "command": "pip install numpy-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "compute",
+    "linalg",
+    "stats"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/numpy-mcp"
+}

package/mcp-configs/database/neo4j-mcp.json

@@ -0,0 +1,37 @@
+{
+  "id": "neo4j-mcp",
+  "name": "Neo4j MCP",
+  "description": "Neo4j graph database for knowledge graphs — run Cypher queries, traverse relationships, and build citation or concept graphs for research.",
+  "category": "database",
+  "install": {
+    "runtime": "python",
+    "package": "mcp-neo4j",
+    "command": "pip install mcp-neo4j"
+  },
+  "config": {
+    "env": {
+      "NEO4J_URI": {
+        "description": "Neo4j connection URI (e.g. bolt://localhost:7687)",
+        "required": true
+      },
+      "NEO4J_USERNAME": {
+        "description": "Neo4j database username",
+        "required": true
+      },
+      "NEO4J_PASSWORD": {
+        "description": "Neo4j database password",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "run_cypher_query",
+    "get_node",
+    "get_relationships",
+    "create_node",
+    "create_relationship",
+    "get_schema"
+  ],
+  "verified": false,
+  "source": "https://github.com/neo4j-contrib/mcp-neo4j"
+}

package/mcp-configs/database/postgres-mcp.json

@@ -0,0 +1,28 @@
+{
+  "id": "postgres-mcp",
+  "name": "PostgreSQL MCP",
+  "description": "PostgreSQL database integration — run SQL queries, inspect schemas, and manage tables in PostgreSQL databases for structured research data.",
+  "category": "database",
+  "install": {
+    "runtime": "node",
+    "package": "@anthropic/mcp-server-postgres",
+    "command": "npm install @anthropic/mcp-server-postgres"
+  },
+  "config": {
+    "env": {
+      "POSTGRES_CONNECTION_STRING": {
+        "description": "PostgreSQL connection string (e.g. postgresql://user:pass@host:5432/dbname)",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "execute_query",
+    "list_tables",
+    "describe_table",
+    "list_schemas",
+    "read_query"
+  ],
+  "verified": false,
+  "source": "https://github.com/anthropics/mcp-server-postgres"
+}

package/mcp-configs/database/sqlite-mcp.json

@@ -0,0 +1,29 @@
+{
+  "id": "sqlite-mcp",
+  "name": "SQLite MCP",
+  "description": "SQLite database operations — execute queries, inspect schemas, create tables, and manage local SQLite databases for research data storage.",
+  "category": "database",
+  "install": {
+    "runtime": "python",
+    "package": "mcp-server-sqlite",
+    "command": "pip install mcp-server-sqlite"
+  },
+  "config": {
+    "env": {
+      "SQLITE_DB_PATH": {
+        "description": "Path to the SQLite database file",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "execute_query",
+    "list_tables",
+    "describe_table",
+    "create_table",
+    "insert_data",
+    "read_query"
+  ],
+  "verified": false,
+  "source": "https://github.com/anthropics/mcp-server-sqlite"
+}

package/mcp-configs/dev-platform/geogebra-mcp.json

@@ -0,0 +1,21 @@
+{
+  "id": "geogebra-mcp",
+  "name": "GeoGebra MCP",
+  "description": "GeoGebra geometric construction, plotting, CAS",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "geogebra-mcp-server",
+    "command": "npm install -g geogebra-mcp-server"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "construct",
+    "plot",
+    "compute"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/geogebra-mcp-server"
+}

package/mcp-configs/dev-platform/github-mcp.json

@@ -0,0 +1,31 @@
+{
+  "id": "github-mcp",
+  "name": "GitHub MCP",
+  "description": "GitHub repository and issue management — create issues, manage pull requests, search repositories, and access code for open-source research projects.",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "@anthropic/mcp-server-github",
+    "command": "npm install @anthropic/mcp-server-github"
+  },
+  "config": {
+    "env": {
+      "GITHUB_TOKEN": {
+        "description": "GitHub personal access token (classic or fine-grained)",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "search_repositories",
+    "get_repository",
+    "list_issues",
+    "create_issue",
+    "get_pull_request",
+    "create_pull_request",
+    "get_file_contents",
+    "search_code"
+  ],
+  "verified": false,
+  "source": "https://github.com/anthropics/mcp-server-github"
+}

package/mcp-configs/dev-platform/gitlab-mcp.json

@@ -0,0 +1,34 @@
+{
+  "id": "gitlab-mcp",
+  "name": "GitLab MCP",
+  "description": "GitLab project management — manage repositories, issues, merge requests, and CI/CD pipelines for research software development.",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "mcp-server-gitlab",
+    "command": "npm install mcp-server-gitlab"
+  },
+  "config": {
+    "env": {
+      "GITLAB_TOKEN": {
+        "description": "GitLab personal access token",
+        "required": true
+      },
+      "GITLAB_URL": {
+        "description": "GitLab instance URL (defaults to https://gitlab.com)",
+        "required": false
+      }
+    }
+  },
+  "tools": [
+    "list_projects",
+    "get_project",
+    "list_issues",
+    "create_issue",
+    "list_merge_requests",
+    "get_file_contents",
+    "search_projects"
+  ],
+  "verified": false,
+  "source": "https://github.com/theailanguage/mcp-server-gitlab"
+}

package/mcp-configs/dev-platform/latex-mcp-server.json

@@ -0,0 +1,21 @@
+{
+  "id": "latex-mcp-server",
+  "name": "LaTeX MCP Server",
+  "description": "Compile LaTeX, download cited papers, run viz scripts",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "latex-mcp-server",
+    "command": "pip install latex-mcp-server"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "compile",
+    "download_papers",
+    "run_viz"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/latex-mcp-server"
+}

package/mcp-configs/dev-platform/manim-mcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "manim-mcp",
+  "name": "Manim Animation MCP",
+  "description": "Manim animation generation for math/science presentations",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "manim-mcp-server",
+    "command": "pip install manim-mcp-server"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "create_animation",
+    "render"
+  ],
+  "verified": false,
+  "source": "https://github.com/nicosantos-mcp/manim-mcp-server"
+}

package/mcp-configs/dev-platform/mcp-echarts.json

@@ -0,0 +1,20 @@
+{
+  "id": "mcp-echarts",
+  "name": "ECharts MCP",
+  "description": "Generate visual charts using Apache ECharts",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "mcp-echarts",
+    "command": "npm install -g mcp-echarts"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "create_chart",
+    "render"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/mcp-echarts"
+}

package/mcp-configs/dev-platform/panel-viz-mcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "panel-viz-mcp",
+  "name": "Panel Viz MCP",
+  "description": "Interactive HoloViz visualizations inline in AI chat",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "panel-viz-mcp",
+    "command": "pip install panel-viz-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "create_viz",
+    "render"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/panel-viz-mcp"
+}

package/mcp-configs/dev-platform/paperbanana.json

@@ -0,0 +1,20 @@
+{
+  "id": "paperbanana",
+  "name": "PaperBanana MCP",
+  "description": "Automated academic figures and research visuals",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "paperbanana",
+    "command": "pip install paperbanana"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "generate_figure",
+    "plot"
+  ],
+  "verified": false,
+  "source": "https://github.com/google-research/paperbanana"
+}

package/mcp-configs/dev-platform/texflow-mcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "texflow-mcp",
+  "name": "TeXFlow MCP",
+  "description": "LaTeX document compiler with MCP interface",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "texflow-mcp",
+    "command": "npm install -g texflow-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "compile",
+    "preview"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/texflow-mcp"
+}

package/mcp-configs/dev-platform/texmcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "texmcp",
+  "name": "TexMCP",
+  "description": "FastMCP microservice for LaTeX to PDF rendering",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "texmcp",
+    "command": "pip install texmcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "render",
+    "compile"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/TexMCP"
+}

package/mcp-configs/dev-platform/typst-mcp.json

@@ -0,0 +1,21 @@
+{
+  "id": "typst-mcp",
+  "name": "Typst MCP",
+  "description": "Typst typesetting: convert LaTeX to Typst, validate, render",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "node",
+    "package": "typst-mcp",
+    "command": "npm install -g typst-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "compile",
+    "convert",
+    "validate"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/typst-mcp"
+}

package/mcp-configs/dev-platform/vizro-mcp.json

@@ -0,0 +1,20 @@
+{
+  "id": "vizro-mcp",
+  "name": "Vizro Dashboard MCP",
+  "description": "McKinsey Vizro validated data charts and dashboards",
+  "category": "dev-platform",
+  "install": {
+    "runtime": "python",
+    "package": "vizro-mcp",
+    "command": "pip install vizro-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "create_dashboard",
+    "create_chart"
+  ],
+  "verified": false,
+  "source": "https://github.com/mckinsey/vizro-mcp"
+}

package/mcp-configs/email/email-mcp.json

@@ -0,0 +1,40 @@
+{
+  "id": "imap-smtp-mcp",
+  "name": "IMAP/SMTP Email MCP",
+  "description": "Universal IMAP/SMTP email server — connect to any email provider via standard protocols for reading, searching, and sending emails.",
+  "category": "email",
+  "install": {
+    "runtime": "python",
+    "package": "email-mcp",
+    "command": "pip install email-mcp"
+  },
+  "config": {
+    "env": {
+      "IMAP_HOST": {
+        "description": "IMAP server hostname (e.g. imap.gmail.com)",
+        "required": true
+      },
+      "SMTP_HOST": {
+        "description": "SMTP server hostname (e.g. smtp.gmail.com)",
+        "required": true
+      },
+      "EMAIL_USERNAME": {
+        "description": "Email account username or address",
+        "required": true
+      },
+      "EMAIL_PASSWORD": {
+        "description": "Email account password or app-specific password",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "search_emails",
+    "read_email",
+    "send_email",
+    "list_folders",
+    "move_email"
+  ],
+  "verified": false,
+  "source": "https://github.com/codefuturist/email-mcp"
+}

package/mcp-configs/email/gmail-mcp.json

@@ -0,0 +1,37 @@
+{
+  "id": "gmail-mcp",
+  "name": "Gmail MCP",
+  "description": "Gmail email integration — search, read, send, and manage emails through Gmail for academic correspondence and collaboration.",
+  "category": "email",
+  "install": {
+    "runtime": "node",
+    "package": "@anthropic/mcp-server-gmail",
+    "command": "npm install @anthropic/mcp-server-gmail"
+  },
+  "config": {
+    "env": {
+      "GOOGLE_CLIENT_ID": {
+        "description": "Google OAuth 2.0 client ID",
+        "required": true
+      },
+      "GOOGLE_CLIENT_SECRET": {
+        "description": "Google OAuth 2.0 client secret",
+        "required": true
+      },
+      "GOOGLE_REFRESH_TOKEN": {
+        "description": "Google OAuth 2.0 refresh token with Gmail scope",
+        "required": true
+      }
+    }
+  },
+  "tools": [
+    "search_emails",
+    "read_email",
+    "send_email",
+    "reply_to_email",
+    "list_labels",
+    "list_threads"
+  ],
+  "verified": false,
+  "source": "https://github.com/anthropics/mcp-server-gmail"
+}

package/mcp-configs/note-knowledge/local-faiss-mcp.json

@@ -0,0 +1,21 @@
+{
+  "id": "local-faiss-mcp",
+  "name": "Local FAISS MCP",
+  "description": "Local FAISS vector database for RAG with document ingestion",
+  "category": "note-knowledge",
+  "install": {
+    "runtime": "python",
+    "package": "local-faiss-mcp",
+    "command": "pip install local-faiss-mcp"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "ingest",
+    "search",
+    "delete"
+  ],
+  "verified": false,
+  "source": "https://github.com/jjohare/local_faiss_mcp"
+}

package/mcp-configs/note-knowledge/mcp-memory-service.json

@@ -0,0 +1,21 @@
+{
+  "id": "mcp-memory-service",
+  "name": "Memory Service MCP",
+  "description": "Universal memory with semantic search and autonomous consolidation",
+  "category": "note-knowledge",
+  "install": {
+    "runtime": "node",
+    "package": "mcp-memory-service",
+    "command": "npm install -g mcp-memory-service"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "store",
+    "search",
+    "consolidate"
+  ],
+  "verified": false,
+  "source": "https://github.com/doobidoo/mcp-memory-service"
+}

package/mcp-configs/note-knowledge/mcp-obsidian.json

@@ -0,0 +1,23 @@
+{
+  "id": "mcp-obsidian",
+  "name": "Obsidian Vault MCP",
+  "description": "Read and search Markdown notes in Obsidian vaults",
+  "category": "note-knowledge",
+  "install": {
+    "runtime": "node",
+    "package": "mcp-obsidian",
+    "command": "npm install -g mcp-obsidian"
+  },
+  "config": {
+    "env": {
+      "VAULT_PATH": "~/ObsidianVault"
+    }
+  },
+  "tools": [
+    "search",
+    "read_note",
+    "list_notes"
+  ],
+  "verified": false,
+  "source": "https://github.com/calclavia/mcp-obsidian"
+}

package/mcp-configs/note-knowledge/mcp-ragdocs.json

@@ -0,0 +1,20 @@
+{
+  "id": "mcp-ragdocs",
+  "name": "RAG Docs MCP",
+  "description": "Documentation retrieval through vector search",
+  "category": "note-knowledge",
+  "install": {
+    "runtime": "node",
+    "package": "mcp-ragdocs",
+    "command": "npm install -g mcp-ragdocs"
+  },
+  "config": {
+    "env": {}
+  },
+  "tools": [
+    "ingest",
+    "search"
+  ],
+  "verified": false,
+  "source": "https://github.com/hannesrudolph/mcp-ragdocs"
+}