@sjcrh/proteinpaint-client 2.222.0 → 2.224.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (868) hide show
  1. package/dist/2dmaf-AHG6N6GX.js +1362 -0
  2. package/dist/AggMatrixInput-A4EATVXG.js +402 -0
  3. package/dist/AggregateMatrix-3D36XP7Q.js +37 -0
  4. package/dist/AppHeader-LBFNK6BI.js +826 -0
  5. package/dist/BoxPlot-JNISSUMV.js +1229 -0
  6. package/dist/CorrelationVolcano-BXXFXVHQ.js +613 -0
  7. package/dist/Cuminc-PYG3TJSE.js +1217 -0
  8. package/dist/DE-QGNB5JKB.js +85 -0
  9. package/dist/DEinput-YVXCVTCX.js +479 -0
  10. package/dist/DM-D37YHRJL.js +86 -0
  11. package/dist/DifferentialAnalysis-TFWK7UE7.js +236 -0
  12. package/dist/Disco-PXBROYMP.js +3384 -0
  13. package/dist/Disco.UI-XERJSEDE.js +239 -0
  14. package/dist/DmrPlot-G3QAPQ5I.js +361 -0
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  17. package/dist/GeneExpInput-EYNET6LR.js +38 -0
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  37. package/dist/ProteomeInput-4M2SXSJG.js +610 -0
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  143. package/dist/condition-ZDF5SRLZ.js +323 -0
  144. package/dist/controls-Z4URI2HB.js +30 -0
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  150. package/dist/dictionary-S4MSWVZV.js +109 -0
  151. package/dist/dnaMethylation-QMKO3DXK.js +29 -0
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  153. package/dist/dofetch-4P5F5ZGU.js +49 -0
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  163. package/dist/geneORA-NWJCROO7.js +269 -0
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  216. package/dist/proteinView-ZHNMVSLF.js +1346 -0
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- {
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- "version": 3,
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- "sources": ["../test/testdata/genomes.js"],
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- "sourcesContent": ["export const hg19 = {\n\tspecies: 'human',\n\tname: 'hg19',\n\thasSNP: true,\n\thasIdeogram: false,\n\thasClinvarVCF: true,\n\tfimo_motif: true,\n\tblat: false,\n\tgeneset: [\n\t\t{\n\t\t\tname: 'Signaling',\n\t\t\tlst: [\n\t\t\t\t{\n\t\t\t\t\tname: 'NRAS'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'FLT3'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'KRAS'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'JAK3'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'BRAF'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'NF1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'MAPK1'\n\t\t\t\t}\n\t\t\t]\n\t\t},\n\t\t{\n\t\t\tname: 'Cell cycle',\n\t\t\tlst: [\n\t\t\t\t{\n\t\t\t\t\tname: 'TP53'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'RB1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'CDKN2A'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'CDKN2B'\n\t\t\t\t}\n\t\t\t]\n\t\t},\n\t\t{\n\t\t\tname: 'Epigenetics',\n\t\t\tlst: [\n\t\t\t\t{\n\t\t\t\t\tname: 'ATRX'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'BCOR'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'MYC'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'MYCN'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'WHSC1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'SUZ12'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EED'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EZH2'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'SETD2'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'CREBBP'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EHMT2'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'PRDM1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'NSD1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'KMT2D'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'UBR4'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'ARID1A'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EP300'\n\t\t\t\t}\n\t\t\t]\n\t\t},\n\t\t{\n\t\t\tname: 'Development',\n\t\t\tlst: [\n\t\t\t\t{\n\t\t\t\t\tname: 'RUNX1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'ETV6'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'GATA3'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'IKZF1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EP300'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'IKZF2'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'IKZF3'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'PAX5'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'VPREB1'\n\t\t\t\t},\n\t\t\t\t{\n\t\t\t\t\tname: 'EBF1'\n\t\t\t\t}\n\t\t\t]\n\t\t}\n\t],\n\tdefaultcoord: {\n\t\tchr: 'chr17',\n\t\tstart: 7568451,\n\t\tstop: 7591984,\n\t\tgene: 'TP53'\n\t},\n\tisdefault: true,\n\tmajorchr: {\n\t\tchr1: 249250621,\n\t\tchr2: 243199373,\n\t\tchr3: 198022430,\n\t\tchr4: 191154276,\n\t\tchr5: 180915260,\n\t\tchr6: 171115067,\n\t\tchr7: 159138663,\n\t\tchr8: 146364022,\n\t\tchr9: 141213431,\n\t\tchr10: 135534747,\n\t\tchr11: 135006516,\n\t\tchr12: 133851895,\n\t\tchr13: 115169878,\n\t\tchr14: 107349540,\n\t\tchr15: 102531392,\n\t\tchr16: 90354753,\n\t\tchr17: 81195210,\n\t\tchr18: 78077248,\n\t\tchr19: 59128983,\n\t\tchr20: 63025520,\n\t\tchr21: 48129895,\n\t\tchr22: 51304566,\n\t\tchrX: 155270560,\n\t\tchrY: 59373566,\n\t\tchrM: 16571\n\t},\n\tmajorchrorder: [\n\t\t'chr1',\n\t\t'chr2',\n\t\t'chr3',\n\t\t'chr4',\n\t\t'chr5',\n\t\t'chr6',\n\t\t'chr7',\n\t\t'chr8',\n\t\t'chr9',\n\t\t'chr10',\n\t\t'chr11',\n\t\t'chr12',\n\t\t'chr13',\n\t\t'chr14',\n\t\t'chr15',\n\t\t'chr16',\n\t\t'chr17',\n\t\t'chr18',\n\t\t'chr19',\n\t\t'chr20',\n\t\t'chr21',\n\t\t'chr22',\n\t\t'chrX',\n\t\t'chrY',\n\t\t'chrM'\n\t],\n\tminorchr: {\n\t\tchr6_ssto_hap7: 4928567,\n\t\tchr6_mcf_hap5: 4833398,\n\t\tchr6_cox_hap2: 4795371,\n\t\tchr6_mann_hap4: 4683263,\n\t\tchr6_apd_hap1: 4622290,\n\t\tchr6_qbl_hap6: 4611984,\n\t\tchr6_dbb_hap3: 4610396,\n\t\tchr17_ctg5_hap1: 1680828,\n\t\tchr4_ctg9_hap1: 590426,\n\t\tchr1_gl000192_random: 547496,\n\t\tchrUn_gl000225: 211173,\n\t\tchr4_gl000194_random: 191469,\n\t\tchr4_gl000193_random: 189789,\n\t\tchr9_gl000200_random: 187035,\n\t\tchrUn_gl000222: 186861,\n\t\tchrUn_gl000212: 186858,\n\t\tchr7_gl000195_random: 182896,\n\t\tchrUn_gl000223: 180455,\n\t\tchrUn_gl000224: 179693,\n\t\tchrUn_gl000219: 179198,\n\t\tchr17_gl000205_random: 174588,\n\t\tchrUn_gl000215: 172545,\n\t\tchrUn_gl000216: 172294,\n\t\tchrUn_gl000217: 172149,\n\t\tchr9_gl000199_random: 169874,\n\t\tchrUn_gl000211: 166566,\n\t\tchrUn_gl000213: 164239,\n\t\tchrUn_gl000220: 161802,\n\t\tchrUn_gl000218: 161147,\n\t\tchr19_gl000209_random: 159169,\n\t\tchrUn_gl000221: 155397,\n\t\tchrUn_gl000214: 137718,\n\t\tchrUn_gl000228: 129120,\n\t\tchrUn_gl000227: 128374,\n\t\tchr1_gl000191_random: 106433,\n\t\tchr19_gl000208_random: 92689,\n\t\tchr9_gl000198_random: 90085,\n\t\tchr17_gl000204_random: 81310,\n\t\tchrUn_gl000233: 45941,\n\t\tchrUn_gl000237: 45867,\n\t\tchrUn_gl000230: 43691,\n\t\tchrUn_gl000242: 43523,\n\t\tchrUn_gl000243: 43341,\n\t\tchrUn_gl000241: 42152,\n\t\tchrUn_gl000236: 41934,\n\t\tchrUn_gl000240: 41933,\n\t\tchr17_gl000206_random: 41001,\n\t\tchrUn_gl000232: 40652,\n\t\tchrUn_gl000234: 40531,\n\t\tchr11_gl000202_random: 40103,\n\t\tchrUn_gl000238: 39939,\n\t\tchrUn_gl000244: 39929,\n\t\tchrUn_gl000248: 39786,\n\t\tchr8_gl000196_random: 38914,\n\t\tchrUn_gl000249: 38502,\n\t\tchrUn_gl000246: 38154,\n\t\tchr17_gl000203_random: 37498,\n\t\tchr8_gl000197_random: 37175,\n\t\tchrUn_gl000245: 36651,\n\t\tchrUn_gl000247: 36422,\n\t\tchr9_gl000201_random: 36148,\n\t\tchrUn_gl000235: 34474,\n\t\tchrUn_gl000239: 33824,\n\t\tchr21_gl000210_random: 27682,\n\t\tchrUn_gl000231: 27386,\n\t\tchrUn_gl000229: 19913,\n\t\tchrUn_gl000226: 15008,\n\t\tchr18_gl000207_random: 4262\n\t},\n\ttracks: [\n\t\t{\n\t\t\t__isgene: true,\n\t\t\ttranslatecoding: true,\n\t\t\tfile: 'anno/refGene.hg19.gz',\n\t\t\ttype: 'bedj',\n\t\t\tname: 'RefGene',\n\t\t\tstackheight: 16,\n\t\t\tstackspace: 1,\n\t\t\tvpad: 4,\n\t\t\tcolor: '#1D591D',\n\t\t\ttkid: '0.16057720645373252'\n\t\t},\n\t\t{\n\t\t\t__isgene: true,\n\t\t\ttranslatecoding: true,\n\t\t\tfile: 'anno/gencode.v40.hg19.gz',\n\t\t\ttype: 'bedj',\n\t\t\tname: 'GENCODE v40',\n\t\t\tstackheight: 16,\n\t\t\tstackspace: 1,\n\t\t\tvpad: 4,\n\t\t\tcategories: {\n\t\t\t\tcoding: {\n\t\t\t\t\tcolor: '#004D99',\n\t\t\t\t\tlabel: 'Coding gene'\n\t\t\t\t},\n\t\t\t\tnonCoding: {\n\t\t\t\t\tcolor: '#009933',\n\t\t\t\t\tlabel: 'Noncoding gene'\n\t\t\t\t},\n\t\t\t\tproblem: {\n\t\t\t\t\tcolor: '#FF3300',\n\t\t\t\t\tlabel: 'Problem'\n\t\t\t\t},\n\t\t\t\tpseudo: {\n\t\t\t\t\tcolor: '#FF00CC',\n\t\t\t\t\tlabel: 'Pseudogene'\n\t\t\t\t}\n\t\t\t},\n\t\t\ttkid: '0.7534145999292718'\n\t\t},\n\t\t{\n\t\t\ttype: 'bedj',\n\t\t\tname: 'RepeatMasker',\n\t\t\tstackheight: 14,\n\t\t\tfile: 'anno/rmsk.hg19.gz',\n\t\t\tonerow: true,\n\t\t\tcategories: {\n\t\t\t\tSINE: {\n\t\t\t\t\tcolor: '#ED8C8E',\n\t\t\t\t\tlabel: 'SINE'\n\t\t\t\t},\n\t\t\t\tLINE: {\n\t\t\t\t\tcolor: '#EDCB8C',\n\t\t\t\t\tlabel: 'LINE'\n\t\t\t\t},\n\t\t\t\tLTR: {\n\t\t\t\t\tcolor: '#E38CED',\n\t\t\t\t\tlabel: 'LTR'\n\t\t\t\t},\n\t\t\t\tDNA: {\n\t\t\t\t\tcolor: '#8C8EED',\n\t\t\t\t\tlabel: 'DNA transposon'\n\t\t\t\t},\n\t\t\t\tsimple: {\n\t\t\t\t\tcolor: '#8EB88C',\n\t\t\t\t\tlabel: 'Simple repeats'\n\t\t\t\t},\n\t\t\t\tlow_complexity: {\n\t\t\t\t\tcolor: '#ACEBA9',\n\t\t\t\t\tlabel: 'Low complexity'\n\t\t\t\t},\n\t\t\t\tsatellite: {\n\t\t\t\t\tcolor: '#B59A84',\n\t\t\t\t\tlabel: 'Satellite'\n\t\t\t\t},\n\t\t\t\tRNA: {\n\t\t\t\t\tcolor: '#9DE0E0',\n\t\t\t\t\tlabel: 'RNA repeat'\n\t\t\t\t},\n\t\t\t\tother: {\n\t\t\t\t\tcolor: '#9BADC2',\n\t\t\t\t\tlabel: 'Other'\n\t\t\t\t},\n\t\t\t\tunknown: {\n\t\t\t\t\tcolor: '#858585',\n\t\t\t\t\tlabel: 'Unknown'\n\t\t\t\t}\n\t\t\t},\n\t\t\ttkid: '0.6948092394070597'\n\t\t}\n\t],\n\thicenzymefragment: [\n\t\t{\n\t\t\tenzyme: 'DpnII',\n\t\t\tfile: 'anno/hicFragment/hic.DpnII.hg19.gz'\n\t\t},\n\t\t{\n\t\t\tenzyme: 'EcoRI',\n\t\t\tfile: 'anno/hicFragment/hic.EcoRI.hg19.gz'\n\t\t},\n\t\t{\n\t\t\tenzyme: 'HindIII',\n\t\t\tfile: 'anno/hicFragment/hic.HindIII.hg19.gz'\n\t\t},\n\t\t{\n\t\t\tenzyme: 'MboI',\n\t\t\tfile: 'anno/hicFragment/hic.MboI.hg19.gz'\n\t\t},\n\t\t{\n\t\t\tenzyme: 'NcoI',\n\t\t\tfile: 'anno/hicFragment/hic.NcoI.hg19.gz'\n\t\t}\n\t],\n\tdatasets: {\n\t\tClinVar: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'ClinVar'\n\t\t},\n\t\tPNET: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'PNET'\n\t\t},\n\t\t'SAMD9-SAMD9L': {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'SAMD9-SAMD9L'\n\t\t}\n\t},\n\thicdomain: {\n\t\tgroups: {\n\t\t\tRaoCell2014: {\n\t\t\t\tname: 'Rao SS et al, Cell 2014',\n\t\t\t\treference:\n\t\t\t\t\t'<a href=https://www.ncbi.nlm.nih.gov/pubmed/25497547 target=_blank>A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping</a>',\n\t\t\t\tsets: {\n\t\t\t\t\tGM12878: {\n\t\t\t\t\t\tname: 'GM12878',\n\t\t\t\t\t\tlongname: 'Human B-Lymphoblastoid'\n\t\t\t\t\t},\n\t\t\t\t\tHMEC: {\n\t\t\t\t\t\tname: 'HMEC',\n\t\t\t\t\t\tlongname: 'Human Mammary Epithelial'\n\t\t\t\t\t},\n\t\t\t\t\tIMR90: {\n\t\t\t\t\t\tname: 'IRM90',\n\t\t\t\t\t\tlongname: 'Human Lung Fibroblast'\n\t\t\t\t\t},\n\t\t\t\t\tKBM7: {\n\t\t\t\t\t\tname: 'KBM7',\n\t\t\t\t\t\tlongname: 'Near Haploid Human Myelogenous Leukemia'\n\t\t\t\t\t},\n\t\t\t\t\tHeLa: {\n\t\t\t\t\t\tname: 'HeLa',\n\t\t\t\t\t\tlongname: 'Human Cervical Carcinoma'\n\t\t\t\t\t},\n\t\t\t\t\tHUVEC: {\n\t\t\t\t\t\tname: 'HUVEC',\n\t\t\t\t\t\tlongname: 'Human Umbilical Vein Endothelial'\n\t\t\t\t\t},\n\t\t\t\t\tK562: {\n\t\t\t\t\t\tname: 'K562',\n\t\t\t\t\t\tlongname: 'Human Erythroleukemia'\n\t\t\t\t\t},\n\t\t\t\t\tNHEK: {\n\t\t\t\t\t\tname: 'NHEK',\n\t\t\t\t\t\tlongname: 'Normal Human Epidermal Keratinocytes'\n\t\t\t\t\t}\n\t\t\t\t}\n\t\t\t}\n\t\t}\n\t},\n\ttkset: [],\n\tisoformcache: {},\n\tjunctionframecache: {},\n\tchrlookup: {\n\t\tCHR1: {\n\t\t\tname: 'chr1',\n\t\t\tlen: 249250621,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR2: {\n\t\t\tname: 'chr2',\n\t\t\tlen: 243199373,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR3: {\n\t\t\tname: 'chr3',\n\t\t\tlen: 198022430,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR4: {\n\t\t\tname: 'chr4',\n\t\t\tlen: 191154276,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR5: {\n\t\t\tname: 'chr5',\n\t\t\tlen: 180915260,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR6: {\n\t\t\tname: 'chr6',\n\t\t\tlen: 171115067,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR7: {\n\t\t\tname: 'chr7',\n\t\t\tlen: 159138663,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR8: {\n\t\t\tname: 'chr8',\n\t\t\tlen: 146364022,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR9: {\n\t\t\tname: 'chr9',\n\t\t\tlen: 141213431,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR10: {\n\t\t\tname: 'chr10',\n\t\t\tlen: 135534747,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR11: {\n\t\t\tname: 'chr11',\n\t\t\tlen: 135006516,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR12: {\n\t\t\tname: 'chr12',\n\t\t\tlen: 133851895,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR13: {\n\t\t\tname: 'chr13',\n\t\t\tlen: 115169878,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR14: {\n\t\t\tname: 'chr14',\n\t\t\tlen: 107349540,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR15: {\n\t\t\tname: 'chr15',\n\t\t\tlen: 102531392,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR16: {\n\t\t\tname: 'chr16',\n\t\t\tlen: 90354753,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR17: {\n\t\t\tname: 'chr17',\n\t\t\tlen: 81195210,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR18: {\n\t\t\tname: 'chr18',\n\t\t\tlen: 78077248,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR19: {\n\t\t\tname: 'chr19',\n\t\t\tlen: 59128983,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR20: {\n\t\t\tname: 'chr20',\n\t\t\tlen: 63025520,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR21: {\n\t\t\tname: 'chr21',\n\t\t\tlen: 48129895,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR22: {\n\t\t\tname: 'chr22',\n\t\t\tlen: 51304566,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRX: {\n\t\t\tname: 'chrX',\n\t\t\tlen: 155270560,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRY: {\n\t\t\tname: 'chrY',\n\t\t\tlen: 59373566,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRM: {\n\t\t\tname: 'chrM',\n\t\t\tlen: 16571,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR6_SSTO_HAP7: {\n\t\t\tname: 'chr6_ssto_hap7',\n\t\t\tlen: 4928567\n\t\t},\n\t\tCHR6_MCF_HAP5: {\n\t\t\tname: 'chr6_mcf_hap5',\n\t\t\tlen: 4833398\n\t\t},\n\t\tCHR6_COX_HAP2: {\n\t\t\tname: 'chr6_cox_hap2',\n\t\t\tlen: 4795371\n\t\t},\n\t\tCHR6_MANN_HAP4: {\n\t\t\tname: 'chr6_mann_hap4',\n\t\t\tlen: 4683263\n\t\t},\n\t\tCHR6_APD_HAP1: {\n\t\t\tname: 'chr6_apd_hap1',\n\t\t\tlen: 4622290\n\t\t},\n\t\tCHR6_QBL_HAP6: {\n\t\t\tname: 'chr6_qbl_hap6',\n\t\t\tlen: 4611984\n\t\t},\n\t\tCHR6_DBB_HAP3: {\n\t\t\tname: 'chr6_dbb_hap3',\n\t\t\tlen: 4610396\n\t\t},\n\t\tCHR17_CTG5_HAP1: {\n\t\t\tname: 'chr17_ctg5_hap1',\n\t\t\tlen: 1680828\n\t\t},\n\t\tCHR4_CTG9_HAP1: {\n\t\t\tname: 'chr4_ctg9_hap1',\n\t\t\tlen: 590426\n\t\t},\n\t\tCHR1_GL000192_RANDOM: {\n\t\t\tname: 'chr1_gl000192_random',\n\t\t\tlen: 547496\n\t\t},\n\t\tCHRUN_GL000225: {\n\t\t\tname: 'chrUn_gl000225',\n\t\t\tlen: 211173\n\t\t},\n\t\tCHR4_GL000194_RANDOM: {\n\t\t\tname: 'chr4_gl000194_random',\n\t\t\tlen: 191469\n\t\t},\n\t\tCHR4_GL000193_RANDOM: {\n\t\t\tname: 'chr4_gl000193_random',\n\t\t\tlen: 189789\n\t\t},\n\t\tCHR9_GL000200_RANDOM: {\n\t\t\tname: 'chr9_gl000200_random',\n\t\t\tlen: 187035\n\t\t},\n\t\tCHRUN_GL000222: {\n\t\t\tname: 'chrUn_gl000222',\n\t\t\tlen: 186861\n\t\t},\n\t\tCHRUN_GL000212: {\n\t\t\tname: 'chrUn_gl000212',\n\t\t\tlen: 186858\n\t\t},\n\t\tCHR7_GL000195_RANDOM: {\n\t\t\tname: 'chr7_gl000195_random',\n\t\t\tlen: 182896\n\t\t},\n\t\tCHRUN_GL000223: {\n\t\t\tname: 'chrUn_gl000223',\n\t\t\tlen: 180455\n\t\t},\n\t\tCHRUN_GL000224: {\n\t\t\tname: 'chrUn_gl000224',\n\t\t\tlen: 179693\n\t\t},\n\t\tCHRUN_GL000219: {\n\t\t\tname: 'chrUn_gl000219',\n\t\t\tlen: 179198\n\t\t},\n\t\tCHR17_GL000205_RANDOM: {\n\t\t\tname: 'chr17_gl000205_random',\n\t\t\tlen: 174588\n\t\t},\n\t\tCHRUN_GL000215: {\n\t\t\tname: 'chrUn_gl000215',\n\t\t\tlen: 172545\n\t\t},\n\t\tCHRUN_GL000216: {\n\t\t\tname: 'chrUn_gl000216',\n\t\t\tlen: 172294\n\t\t},\n\t\tCHRUN_GL000217: {\n\t\t\tname: 'chrUn_gl000217',\n\t\t\tlen: 172149\n\t\t},\n\t\tCHR9_GL000199_RANDOM: {\n\t\t\tname: 'chr9_gl000199_random',\n\t\t\tlen: 169874\n\t\t},\n\t\tCHRUN_GL000211: {\n\t\t\tname: 'chrUn_gl000211',\n\t\t\tlen: 166566\n\t\t},\n\t\tCHRUN_GL000213: {\n\t\t\tname: 'chrUn_gl000213',\n\t\t\tlen: 164239\n\t\t},\n\t\tCHRUN_GL000220: {\n\t\t\tname: 'chrUn_gl000220',\n\t\t\tlen: 161802\n\t\t},\n\t\tCHRUN_GL000218: {\n\t\t\tname: 'chrUn_gl000218',\n\t\t\tlen: 161147\n\t\t},\n\t\tCHR19_GL000209_RANDOM: {\n\t\t\tname: 'chr19_gl000209_random',\n\t\t\tlen: 159169\n\t\t},\n\t\tCHRUN_GL000221: {\n\t\t\tname: 'chrUn_gl000221',\n\t\t\tlen: 155397\n\t\t},\n\t\tCHRUN_GL000214: {\n\t\t\tname: 'chrUn_gl000214',\n\t\t\tlen: 137718\n\t\t},\n\t\tCHRUN_GL000228: {\n\t\t\tname: 'chrUn_gl000228',\n\t\t\tlen: 129120\n\t\t},\n\t\tCHRUN_GL000227: {\n\t\t\tname: 'chrUn_gl000227',\n\t\t\tlen: 128374\n\t\t},\n\t\tCHR1_GL000191_RANDOM: {\n\t\t\tname: 'chr1_gl000191_random',\n\t\t\tlen: 106433\n\t\t},\n\t\tCHR19_GL000208_RANDOM: {\n\t\t\tname: 'chr19_gl000208_random',\n\t\t\tlen: 92689\n\t\t},\n\t\tCHR9_GL000198_RANDOM: {\n\t\t\tname: 'chr9_gl000198_random',\n\t\t\tlen: 90085\n\t\t},\n\t\tCHR17_GL000204_RANDOM: {\n\t\t\tname: 'chr17_gl000204_random',\n\t\t\tlen: 81310\n\t\t},\n\t\tCHRUN_GL000233: {\n\t\t\tname: 'chrUn_gl000233',\n\t\t\tlen: 45941\n\t\t},\n\t\tCHRUN_GL000237: {\n\t\t\tname: 'chrUn_gl000237',\n\t\t\tlen: 45867\n\t\t},\n\t\tCHRUN_GL000230: {\n\t\t\tname: 'chrUn_gl000230',\n\t\t\tlen: 43691\n\t\t},\n\t\tCHRUN_GL000242: {\n\t\t\tname: 'chrUn_gl000242',\n\t\t\tlen: 43523\n\t\t},\n\t\tCHRUN_GL000243: {\n\t\t\tname: 'chrUn_gl000243',\n\t\t\tlen: 43341\n\t\t},\n\t\tCHRUN_GL000241: {\n\t\t\tname: 'chrUn_gl000241',\n\t\t\tlen: 42152\n\t\t},\n\t\tCHRUN_GL000236: {\n\t\t\tname: 'chrUn_gl000236',\n\t\t\tlen: 41934\n\t\t},\n\t\tCHRUN_GL000240: {\n\t\t\tname: 'chrUn_gl000240',\n\t\t\tlen: 41933\n\t\t},\n\t\tCHR17_GL000206_RANDOM: {\n\t\t\tname: 'chr17_gl000206_random',\n\t\t\tlen: 41001\n\t\t},\n\t\tCHRUN_GL000232: {\n\t\t\tname: 'chrUn_gl000232',\n\t\t\tlen: 40652\n\t\t},\n\t\tCHRUN_GL000234: {\n\t\t\tname: 'chrUn_gl000234',\n\t\t\tlen: 40531\n\t\t},\n\t\tCHR11_GL000202_RANDOM: {\n\t\t\tname: 'chr11_gl000202_random',\n\t\t\tlen: 40103\n\t\t},\n\t\tCHRUN_GL000238: {\n\t\t\tname: 'chrUn_gl000238',\n\t\t\tlen: 39939\n\t\t},\n\t\tCHRUN_GL000244: {\n\t\t\tname: 'chrUn_gl000244',\n\t\t\tlen: 39929\n\t\t},\n\t\tCHRUN_GL000248: {\n\t\t\tname: 'chrUn_gl000248',\n\t\t\tlen: 39786\n\t\t},\n\t\tCHR8_GL000196_RANDOM: {\n\t\t\tname: 'chr8_gl000196_random',\n\t\t\tlen: 38914\n\t\t},\n\t\tCHRUN_GL000249: {\n\t\t\tname: 'chrUn_gl000249',\n\t\t\tlen: 38502\n\t\t},\n\t\tCHRUN_GL000246: {\n\t\t\tname: 'chrUn_gl000246',\n\t\t\tlen: 38154\n\t\t},\n\t\tCHR17_GL000203_RANDOM: {\n\t\t\tname: 'chr17_gl000203_random',\n\t\t\tlen: 37498\n\t\t},\n\t\tCHR8_GL000197_RANDOM: {\n\t\t\tname: 'chr8_gl000197_random',\n\t\t\tlen: 37175\n\t\t},\n\t\tCHRUN_GL000245: {\n\t\t\tname: 'chrUn_gl000245',\n\t\t\tlen: 36651\n\t\t},\n\t\tCHRUN_GL000247: {\n\t\t\tname: 'chrUn_gl000247',\n\t\t\tlen: 36422\n\t\t},\n\t\tCHR9_GL000201_RANDOM: {\n\t\t\tname: 'chr9_gl000201_random',\n\t\t\tlen: 36148\n\t\t},\n\t\tCHRUN_GL000235: {\n\t\t\tname: 'chrUn_gl000235',\n\t\t\tlen: 34474\n\t\t},\n\t\tCHRUN_GL000239: {\n\t\t\tname: 'chrUn_gl000239',\n\t\t\tlen: 33824\n\t\t},\n\t\tCHR21_GL000210_RANDOM: {\n\t\t\tname: 'chr21_gl000210_random',\n\t\t\tlen: 27682\n\t\t},\n\t\tCHRUN_GL000231: {\n\t\t\tname: 'chrUn_gl000231',\n\t\t\tlen: 27386\n\t\t},\n\t\tCHRUN_GL000229: {\n\t\t\tname: 'chrUn_gl000229',\n\t\t\tlen: 19913\n\t\t},\n\t\tCHRUN_GL000226: {\n\t\t\tname: 'chrUn_gl000226',\n\t\t\tlen: 15008\n\t\t},\n\t\tCHR18_GL000207_RANDOM: {\n\t\t\tname: 'chr18_gl000207_random',\n\t\t\tlen: 4262\n\t\t}\n\t}\n}\n\nexport const hg38 = {\n\tspecies: 'human',\n\tname: 'hg38-test',\n\thasSNP: false,\n\thasIdeogram: false,\n\thasClinvarVCF: true,\n\tfimo_motif: true,\n\tblat: false,\n\tdefaultcoord: {\n\t\tchr: 'chr17',\n\t\tstart: 7666657,\n\t\tstop: 7688274\n\t},\n\tmajorchr: {\n\t\tchr1: 248956422,\n\t\tchr2: 242193529,\n\t\tchr3: 198295559,\n\t\tchr4: 190214555,\n\t\tchr5: 181538259,\n\t\tchr6: 170805979,\n\t\tchr7: 159345973,\n\t\tchr8: 145138636,\n\t\tchr9: 138394717,\n\t\tchr10: 133797422,\n\t\tchr11: 135086622,\n\t\tchr12: 133275309,\n\t\tchr13: 114364328,\n\t\tchr14: 107043718,\n\t\tchr15: 101991189,\n\t\tchr16: 90338345,\n\t\tchr17: 83257441,\n\t\tchr18: 80373285,\n\t\tchr19: 58617616,\n\t\tchr20: 64444167,\n\t\tchr21: 46709983,\n\t\tchr22: 50818468,\n\t\tchrX: 156040895,\n\t\tchrY: 57227415,\n\t\tchrM: 16569\n\t},\n\tmajorchrorder: [\n\t\t'chr1',\n\t\t'chr2',\n\t\t'chr3',\n\t\t'chr4',\n\t\t'chr5',\n\t\t'chr6',\n\t\t'chr7',\n\t\t'chr8',\n\t\t'chr9',\n\t\t'chr10',\n\t\t'chr11',\n\t\t'chr12',\n\t\t'chr13',\n\t\t'chr14',\n\t\t'chr15',\n\t\t'chr16',\n\t\t'chr17',\n\t\t'chr18',\n\t\t'chr19',\n\t\t'chr20',\n\t\t'chr21',\n\t\t'chr22',\n\t\t'chrX',\n\t\t'chrY',\n\t\t'chrM'\n\t],\n\tminorchr: {\n\t\tchr15_KI270905v1_alt: 5161414,\n\t\tchr6_GL000256v2_alt: 4929269,\n\t\tchr6_GL000254v2_alt: 4827813,\n\t\tchr6_GL000251v2_alt: 4795265,\n\t\tchr6_GL000253v2_alt: 4677643,\n\t\tchr6_GL000250v2_alt: 4672374,\n\t\tchr6_GL000255v2_alt: 4606388,\n\t\tchr6_GL000252v2_alt: 4604811,\n\t\tchr17_KI270857v1_alt: 2877074,\n\t\tchr16_KI270853v1_alt: 2659700,\n\t\tchr16_KI270728v1_random: 1872759,\n\t\tchr17_GL000258v2_alt: 1821992,\n\t\tchr5_GL339449v2_alt: 1612928,\n\t\tchr14_KI270847v1_alt: 1511111,\n\t\tchr17_KI270908v1_alt: 1423190,\n\t\tchr14_KI270846v1_alt: 1351393,\n\t\tchr5_KI270897v1_alt: 1144418,\n\t\tchr7_KI270803v1_alt: 1111570,\n\t\tchr19_GL949749v2_alt: 1091841,\n\t\tchr19_KI270938v1_alt: 1066800,\n\t\tchr19_GL949750v2_alt: 1066390,\n\t\tchr19_GL949748v2_alt: 1064304,\n\t\tchr19_GL949751v2_alt: 1002683,\n\t\tchr19_GL949746v1_alt: 987716,\n\t\tchr19_GL949752v1_alt: 987100,\n\t\tchr8_KI270821v1_alt: 985506,\n\t\tchr1_KI270763v1_alt: 911658,\n\t\tchr6_KI270801v1_alt: 870480,\n\t\tchr19_GL949753v2_alt: 796479,\n\t\tchr19_GL949747v2_alt: 729520,\n\t\tchr8_KI270822v1_alt: 624492,\n\t\tchr4_GL000257v2_alt: 586476,\n\t\tchr12_KI270904v1_alt: 572349,\n\t\tchr4_KI270925v1_alt: 555799,\n\t\tchr15_KI270852v1_alt: 478999,\n\t\tchr15_KI270727v1_random: 448248,\n\t\tchr9_KI270823v1_alt: 439082,\n\t\tchr15_KI270850v1_alt: 430880,\n\t\tchr1_KI270759v1_alt: 425601,\n\t\tchr12_GL877876v1_alt: 408271,\n\t\tchrUn_KI270442v1: 392061,\n\t\tchr17_KI270862v1_alt: 391357,\n\t\tchr15_GL383555v2_alt: 388773,\n\t\tchr19_GL383573v1_alt: 385657,\n\t\tchr4_KI270896v1_alt: 378547,\n\t\tchr4_GL383528v1_alt: 376187,\n\t\tchr17_GL383563v3_alt: 375691,\n\t\tchr8_KI270810v1_alt: 374415,\n\t\tchr1_GL383520v2_alt: 366580,\n\t\tchr1_KI270762v1_alt: 354444,\n\t\tchr15_KI270848v1_alt: 327382,\n\t\tchr17_KI270909v1_alt: 325800,\n\t\tchr14_KI270844v1_alt: 322166,\n\t\tchr8_KI270900v1_alt: 318687,\n\t\tchr10_GL383546v1_alt: 309802,\n\t\tchr13_KI270838v1_alt: 306913,\n\t\tchr8_KI270816v1_alt: 305841,\n\t\tchr22_KI270879v1_alt: 304135,\n\t\tchr8_KI270813v1_alt: 300230,\n\t\tchr11_KI270831v1_alt: 296895,\n\t\tchr15_GL383554v1_alt: 296527,\n\t\tchr8_KI270811v1_alt: 292436,\n\t\tchr18_GL383567v1_alt: 289831,\n\t\tchrX_KI270880v1_alt: 284869,\n\t\tchr8_KI270812v1_alt: 282736,\n\t\tchr19_KI270921v1_alt: 282224,\n\t\tchr17_KI270729v1_random: 280839,\n\t\tchr17_JH159146v1_alt: 278131,\n\t\tchrX_KI270913v1_alt: 274009,\n\t\tchr6_KI270798v1_alt: 271782,\n\t\tchr7_KI270808v1_alt: 271455,\n\t\tchr22_KI270876v1_alt: 263666,\n\t\tchr15_KI270851v1_alt: 263054,\n\t\tchr22_KI270875v1_alt: 259914,\n\t\tchr1_KI270766v1_alt: 256271,\n\t\tchr19_KI270882v1_alt: 248807,\n\t\tchr3_KI270778v1_alt: 248252,\n\t\tchr15_KI270849v1_alt: 244917,\n\t\tchr4_KI270786v1_alt: 244096,\n\t\tchr12_KI270835v1_alt: 238139,\n\t\tchr17_KI270858v1_alt: 235827,\n\t\tchr19_KI270867v1_alt: 233762,\n\t\tchr16_KI270855v1_alt: 232857,\n\t\tchr8_KI270926v1_alt: 229282,\n\t\tchr5_GL949742v1_alt: 226852,\n\t\tchr3_KI270780v1_alt: 224108,\n\t\tchr17_GL383565v1_alt: 223995,\n\t\tchr2_KI270774v1_alt: 223625,\n\t\tchr4_KI270790v1_alt: 220246,\n\t\tchr11_KI270927v1_alt: 218612,\n\t\tchr19_KI270932v1_alt: 215732,\n\t\tchr11_KI270903v1_alt: 214625,\n\t\tchr2_KI270894v1_alt: 214158,\n\t\tchr14_GL000225v1_random: 211173,\n\t\tchrUn_KI270743v1: 210658,\n\t\tchr11_KI270832v1_alt: 210133,\n\t\tchr7_KI270805v1_alt: 209988,\n\t\tchr4_GL000008v2_random: 209709,\n\t\tchr7_KI270809v1_alt: 209586,\n\t\tchr19_KI270887v1_alt: 209512,\n\t\tchr4_KI270789v1_alt: 205944,\n\t\tchr3_KI270779v1_alt: 205312,\n\t\tchr19_KI270914v1_alt: 205194,\n\t\tchr19_KI270886v1_alt: 204239,\n\t\tchr11_KI270829v1_alt: 204059,\n\t\tchr14_GL000009v2_random: 201709,\n\t\tchr21_GL383579v2_alt: 201197,\n\t\tchr11_JH159136v1_alt: 200998,\n\t\tchr19_KI270930v1_alt: 200773,\n\t\tchrUn_KI270747v1: 198735,\n\t\tchr18_GL383571v1_alt: 198278,\n\t\tchr19_KI270920v1_alt: 198005,\n\t\tchr6_KI270797v1_alt: 197536,\n\t\tchr3_KI270935v1_alt: 197351,\n\t\tchr17_KI270861v1_alt: 196688,\n\t\tchr15_KI270906v1_alt: 196384,\n\t\tchr5_KI270791v1_alt: 195710,\n\t\tchr14_KI270722v1_random: 194050,\n\t\tchr16_GL383556v1_alt: 192462,\n\t\tchr13_KI270840v1_alt: 191684,\n\t\tchr14_GL000194v1_random: 191469,\n\t\tchr11_JH159137v1_alt: 191409,\n\t\tchr19_KI270917v1_alt: 190932,\n\t\tchr7_KI270899v1_alt: 190869,\n\t\tchr19_KI270923v1_alt: 189352,\n\t\tchr10_KI270825v1_alt: 188315,\n\t\tchr19_GL383576v1_alt: 188024,\n\t\tchr19_KI270922v1_alt: 187935,\n\t\tchrUn_KI270742v1: 186739,\n\t\tchr22_KI270878v1_alt: 186262,\n\t\tchr19_KI270929v1_alt: 186203,\n\t\tchr11_KI270826v1_alt: 186169,\n\t\tchr6_KB021644v2_alt: 185823,\n\t\tchr17_GL000205v2_random: 185591,\n\t\tchr1_KI270765v1_alt: 185285,\n\t\tchr19_KI270916v1_alt: 184516,\n\t\tchr19_KI270890v1_alt: 184499,\n\t\tchr3_KI270784v1_alt: 184404,\n\t\tchr12_GL383551v1_alt: 184319,\n\t\tchr20_KI270870v1_alt: 183433,\n\t\tchrUn_GL000195v1: 182896,\n\t\tchr1_GL383518v1_alt: 182439,\n\t\tchr22_KI270736v1_random: 181920,\n\t\tchr10_KI270824v1_alt: 181496,\n\t\tchr14_KI270845v1_alt: 180703,\n\t\tchr3_GL383526v1_alt: 180671,\n\t\tchr13_KI270839v1_alt: 180306,\n\t\tchr22_KI270733v1_random: 179772,\n\t\tchrUn_GL000224v1: 179693,\n\t\tchr10_GL383545v1_alt: 179254,\n\t\tchrUn_GL000219v1: 179198,\n\t\tchr5_KI270792v1_alt: 179043,\n\t\tchr17_KI270860v1_alt: 178921,\n\t\tchr19_GL000209v2_alt: 177381,\n\t\tchr11_KI270830v1_alt: 177092,\n\t\tchr9_KI270719v1_random: 176845,\n\t\tchrUn_GL000216v2: 176608,\n\t\tchr22_KI270928v1_alt: 176103,\n\t\tchr1_KI270712v1_random: 176043,\n\t\tchr6_KI270800v1_alt: 175808,\n\t\tchr1_KI270706v1_random: 175055,\n\t\tchr2_KI270776v1_alt: 174166,\n\t\tchr18_KI270912v1_alt: 174061,\n\t\tchr3_KI270777v1_alt: 173649,\n\t\tchr5_GL383531v1_alt: 173459,\n\t\tchr3_JH636055v2_alt: 173151,\n\t\tchr14_KI270725v1_random: 172810,\n\t\tchr5_KI270796v1_alt: 172708,\n\t\tchr9_GL383541v1_alt: 171286,\n\t\tchr19_KI270885v1_alt: 171027,\n\t\tchr19_KI270919v1_alt: 170701,\n\t\tchr19_KI270889v1_alt: 170698,\n\t\tchr19_KI270891v1_alt: 170680,\n\t\tchr19_KI270915v1_alt: 170665,\n\t\tchr19_KI270933v1_alt: 170537,\n\t\tchr19_KI270883v1_alt: 170399,\n\t\tchr19_GL383575v2_alt: 170222,\n\t\tchr19_KI270931v1_alt: 170148,\n\t\tchr12_GL383550v2_alt: 169178,\n\t\tchr13_KI270841v1_alt: 169134,\n\t\tchrUn_KI270744v1: 168472,\n\t\tchr18_KI270863v1_alt: 167999,\n\t\tchr18_GL383569v1_alt: 167950,\n\t\tchr12_GL877875v1_alt: 167313,\n\t\tchr21_KI270874v1_alt: 166743,\n\t\tchr3_KI270924v1_alt: 166540,\n\t\tchr1_KI270761v1_alt: 165834,\n\t\tchr3_KI270937v1_alt: 165607,\n\t\tchr22_KI270734v1_random: 165050,\n\t\tchr18_GL383570v1_alt: 164789,\n\t\tchr5_KI270794v1_alt: 164558,\n\t\tchr4_GL383527v1_alt: 164536,\n\t\tchrUn_GL000213v1: 164239,\n\t\tchr3_KI270936v1_alt: 164170,\n\t\tchr3_KI270934v1_alt: 163458,\n\t\tchr9_GL383539v1_alt: 162988,\n\t\tchr3_KI270895v1_alt: 162896,\n\t\tchr22_GL383582v2_alt: 162811,\n\t\tchr3_KI270782v1_alt: 162429,\n\t\tchr1_KI270892v1_alt: 162212,\n\t\tchrUn_GL000220v1: 161802,\n\t\tchr2_KI270767v1_alt: 161578,\n\t\tchr2_KI270715v1_random: 161471,\n\t\tchr2_KI270893v1_alt: 161218,\n\t\tchrUn_GL000218v1: 161147,\n\t\tchr18_GL383572v1_alt: 159547,\n\t\tchr8_KI270817v1_alt: 158983,\n\t\tchr4_KI270788v1_alt: 158965,\n\t\tchrUn_KI270749v1: 158759,\n\t\tchr7_KI270806v1_alt: 158166,\n\t\tchr7_KI270804v1_alt: 157952,\n\t\tchr18_KI270911v1_alt: 157710,\n\t\tchrUn_KI270741v1: 157432,\n\t\tchr17_KI270910v1_alt: 157099,\n\t\tchr19_KI270884v1_alt: 157053,\n\t\tchr19_GL383574v1_alt: 155864,\n\t\tchr19_KI270888v1_alt: 155532,\n\t\tchr3_GL000221v1_random: 155397,\n\t\tchr11_GL383547v1_alt: 154407,\n\t\tchr2_KI270716v1_random: 153799,\n\t\tchr12_GL383553v2_alt: 152874,\n\t\tchr6_KI270799v1_alt: 152148,\n\t\tchr22_KI270731v1_random: 150754,\n\t\tchrUn_KI270751v1: 150742,\n\t\tchrUn_KI270750v1: 148850,\n\t\tchr8_KI270818v1_alt: 145606,\n\t\tchrX_KI270881v1_alt: 144206,\n\t\tchr21_KI270873v1_alt: 143900,\n\t\tchr2_GL383521v1_alt: 143390,\n\t\tchr8_KI270814v1_alt: 141812,\n\t\tchr12_GL383552v1_alt: 138655,\n\t\tchrUn_KI270519v1: 138126,\n\t\tchr2_KI270775v1_alt: 138019,\n\t\tchr17_KI270907v1_alt: 137721,\n\t\tchrUn_GL000214v1: 137718,\n\t\tchr8_KI270901v1_alt: 136959,\n\t\tchr2_KI270770v1_alt: 136240,\n\t\tchr16_KI270854v1_alt: 134193,\n\t\tchr8_KI270819v1_alt: 133535,\n\t\tchr17_GL383564v2_alt: 133151,\n\t\tchr2_KI270772v1_alt: 133041,\n\t\tchr8_KI270815v1_alt: 132244,\n\t\tchr5_KI270795v1_alt: 131892,\n\t\tchr5_KI270898v1_alt: 130957,\n\t\tchr20_GL383577v2_alt: 128386,\n\t\tchr1_KI270708v1_random: 127682,\n\t\tchr7_KI270807v1_alt: 126434,\n\t\tchr5_KI270793v1_alt: 126136,\n\t\tchr6_GL383533v1_alt: 124736,\n\t\tchr2_GL383522v1_alt: 123821,\n\t\tchr19_KI270918v1_alt: 123111,\n\t\tchr12_GL383549v1_alt: 120804,\n\t\tchr2_KI270769v1_alt: 120616,\n\t\tchr4_KI270785v1_alt: 119912,\n\t\tchr12_KI270834v1_alt: 119498,\n\t\tchr7_GL383534v2_alt: 119183,\n\t\tchr20_KI270869v1_alt: 118774,\n\t\tchr21_GL383581v2_alt: 116689,\n\t\tchr3_KI270781v1_alt: 113034,\n\t\tchr17_KI270730v1_random: 112551,\n\t\tchrUn_KI270438v1: 112505,\n\t\tchr4_KI270787v1_alt: 111943,\n\t\tchr18_KI270864v1_alt: 111737,\n\t\tchr2_KI270771v1_alt: 110395,\n\t\tchr1_GL383519v1_alt: 110268,\n\t\tchr2_KI270768v1_alt: 110099,\n\t\tchr1_KI270760v1_alt: 109528,\n\t\tchr3_KI270783v1_alt: 109187,\n\t\tchr17_KI270859v1_alt: 108763,\n\t\tchr11_KI270902v1_alt: 106711,\n\t\tchr18_GL383568v1_alt: 104552,\n\t\tchr22_KI270737v1_random: 103838,\n\t\tchr13_KI270843v1_alt: 103832,\n\t\tchr22_KI270877v1_alt: 101331,\n\t\tchr5_GL383530v1_alt: 101241,\n\t\tchr11_KI270721v1_random: 100316,\n\t\tchr22_KI270738v1_random: 99375,\n\t\tchr22_GL383583v2_alt: 96924,\n\t\tchr2_GL582966v2_alt: 96131,\n\t\tchrUn_KI270748v1: 93321,\n\t\tchrUn_KI270435v1: 92983,\n\t\tchr5_GL000208v1_random: 92689,\n\t\tchrUn_KI270538v1: 91309,\n\t\tchr17_GL383566v1_alt: 90219,\n\t\tchr16_GL383557v1_alt: 89672,\n\t\tchr17_JH159148v1_alt: 88070,\n\t\tchr5_GL383532v1_alt: 82728,\n\t\tchr21_KI270872v1_alt: 82692,\n\t\tchrUn_KI270756v1: 79590,\n\t\tchr6_KI270758v1_alt: 76752,\n\t\tchr12_KI270833v1_alt: 76061,\n\t\tchr6_KI270802v1_alt: 75005,\n\t\tchr21_GL383580v2_alt: 74653,\n\t\tchr22_KB663609v1_alt: 74013,\n\t\tchr22_KI270739v1_random: 73985,\n\t\tchr9_GL383540v1_alt: 71551,\n\t\tchrUn_KI270757v1: 71251,\n\t\tchr2_KI270773v1_alt: 70887,\n\t\tchr17_JH159147v1_alt: 70345,\n\t\tchr11_KI270827v1_alt: 67707,\n\t\tchr1_KI270709v1_random: 66860,\n\t\tchrUn_KI270746v1: 66486,\n\t\tchr16_KI270856v1_alt: 63982,\n\t\tchr21_GL383578v2_alt: 63917,\n\t\tchrUn_KI270753v1: 62944,\n\t\tchr19_KI270868v1_alt: 61734,\n\t\tchr9_GL383542v1_alt: 60032,\n\t\tchr20_KI270871v1_alt: 58661,\n\t\tchr12_KI270836v1_alt: 56134,\n\t\tchr19_KI270865v1_alt: 52969,\n\t\tchr1_KI270764v1_alt: 50258,\n\t\tchrUn_KI270589v1: 44474,\n\t\tchr14_KI270726v1_random: 43739,\n\t\tchr19_KI270866v1_alt: 43156,\n\t\tchr22_KI270735v1_random: 42811,\n\t\tchr1_KI270711v1_random: 42210,\n\t\tchrUn_KI270745v1: 41891,\n\t\tchr1_KI270714v1_random: 41717,\n\t\tchr22_KI270732v1_random: 41543,\n\t\tchr1_KI270713v1_random: 40745,\n\t\tchrUn_KI270754v1: 40191,\n\t\tchr1_KI270710v1_random: 40176,\n\t\tchr12_KI270837v1_alt: 40090,\n\t\tchr9_KI270717v1_random: 40062,\n\t\tchr14_KI270724v1_random: 39555,\n\t\tchr9_KI270720v1_random: 39050,\n\t\tchr14_KI270723v1_random: 38115,\n\t\tchr9_KI270718v1_random: 38054,\n\t\tchrUn_KI270317v1: 37690,\n\t\tchr13_KI270842v1_alt: 37287,\n\t\tchrY_KI270740v1_random: 37240,\n\t\tchrUn_KI270755v1: 36723,\n\t\tchr8_KI270820v1_alt: 36640,\n\t\tchr1_KI270707v1_random: 32032,\n\t\tchrUn_KI270579v1: 31033,\n\t\tchrUn_KI270752v1: 27745,\n\t\tchrUn_KI270512v1: 22689,\n\t\tchrUn_KI270322v1: 21476,\n\t\tchrUn_GL000226v1: 15008,\n\t\tchrUn_KI270311v1: 12399,\n\t\tchrUn_KI270366v1: 8320,\n\t\tchrUn_KI270511v1: 8127,\n\t\tchrUn_KI270448v1: 7992,\n\t\tchrUn_KI270521v1: 7642,\n\t\tchrUn_KI270581v1: 7046,\n\t\tchrUn_KI270582v1: 6504,\n\t\tchrUn_KI270515v1: 6361,\n\t\tchrUn_KI270588v1: 6158,\n\t\tchrUn_KI270591v1: 5796,\n\t\tchrUn_KI270522v1: 5674,\n\t\tchrUn_KI270507v1: 5353,\n\t\tchrUn_KI270590v1: 4685,\n\t\tchrUn_KI270584v1: 4513,\n\t\tchrUn_KI270320v1: 4416,\n\t\tchrUn_KI270382v1: 4215,\n\t\tchrUn_KI270468v1: 4055,\n\t\tchrUn_KI270467v1: 3920,\n\t\tchrUn_KI270362v1: 3530,\n\t\tchrUn_KI270517v1: 3253,\n\t\tchrUn_KI270593v1: 3041,\n\t\tchrUn_KI270528v1: 2983,\n\t\tchrUn_KI270587v1: 2969,\n\t\tchrUn_KI270364v1: 2855,\n\t\tchrUn_KI270371v1: 2805,\n\t\tchrUn_KI270333v1: 2699,\n\t\tchrUn_KI270374v1: 2656,\n\t\tchrUn_KI270411v1: 2646,\n\t\tchrUn_KI270414v1: 2489,\n\t\tchrUn_KI270510v1: 2415,\n\t\tchrUn_KI270390v1: 2387,\n\t\tchrUn_KI270375v1: 2378,\n\t\tchrUn_KI270420v1: 2321,\n\t\tchrUn_KI270509v1: 2318,\n\t\tchrUn_KI270315v1: 2276,\n\t\tchrUn_KI270302v1: 2274,\n\t\tchrUn_KI270518v1: 2186,\n\t\tchrUn_KI270530v1: 2168,\n\t\tchrUn_KI270304v1: 2165,\n\t\tchrUn_KI270418v1: 2145,\n\t\tchrUn_KI270424v1: 2140,\n\t\tchrUn_KI270417v1: 2043,\n\t\tchrUn_KI270508v1: 1951,\n\t\tchrUn_KI270303v1: 1942,\n\t\tchrUn_KI270381v1: 1930,\n\t\tchrUn_KI270529v1: 1899,\n\t\tchrUn_KI270425v1: 1884,\n\t\tchrUn_KI270396v1: 1880,\n\t\tchrUn_KI270363v1: 1803,\n\t\tchrUn_KI270386v1: 1788,\n\t\tchrUn_KI270465v1: 1774,\n\t\tchrUn_KI270383v1: 1750,\n\t\tchrUn_KI270384v1: 1658,\n\t\tchrUn_KI270330v1: 1652,\n\t\tchrUn_KI270372v1: 1650,\n\t\tchrUn_KI270548v1: 1599,\n\t\tchrUn_KI270580v1: 1553,\n\t\tchrUn_KI270387v1: 1537,\n\t\tchrUn_KI270391v1: 1484,\n\t\tchrUn_KI270305v1: 1472,\n\t\tchrUn_KI270373v1: 1451,\n\t\tchrUn_KI270422v1: 1445,\n\t\tchrUn_KI270316v1: 1444,\n\t\tchrUn_KI270338v1: 1428,\n\t\tchrUn_KI270340v1: 1428,\n\t\tchrUn_KI270583v1: 1400,\n\t\tchrUn_KI270334v1: 1368,\n\t\tchrUn_KI270429v1: 1361,\n\t\tchrUn_KI270393v1: 1308,\n\t\tchrUn_KI270516v1: 1300,\n\t\tchrUn_KI270389v1: 1298,\n\t\tchrUn_KI270466v1: 1233,\n\t\tchrUn_KI270388v1: 1216,\n\t\tchrUn_KI270544v1: 1202,\n\t\tchrUn_KI270310v1: 1201,\n\t\tchrUn_KI270412v1: 1179,\n\t\tchrUn_KI270395v1: 1143,\n\t\tchrUn_KI270376v1: 1136,\n\t\tchrUn_KI270337v1: 1121,\n\t\tchrUn_KI270335v1: 1048,\n\t\tchrUn_KI270378v1: 1048,\n\t\tchrUn_KI270379v1: 1045,\n\t\tchrUn_KI270329v1: 1040,\n\t\tchrUn_KI270419v1: 1029,\n\t\tchrUn_KI270336v1: 1026,\n\t\tchrUn_KI270312v1: 998,\n\t\tchrUn_KI270539v1: 993,\n\t\tchrUn_KI270385v1: 990,\n\t\tchrUn_KI270423v1: 981,\n\t\tchrUn_KI270392v1: 971,\n\t\tchrUn_KI270394v1: 970\n\t},\n\ttracks: [\n\t\t{\n\t\t\t__isgene: true,\n\t\t\ttranslatecoding: true,\n\t\t\tfile: 'anno/refGene.hg38.gz',\n\t\t\ttype: 'bedj',\n\t\t\tname: 'RefGene',\n\t\t\tstackheight: 16,\n\t\t\tstackspace: 1,\n\t\t\tvpad: 4,\n\t\t\tcolor: '#1D591D',\n\t\t\ttkid: '0.3849374642211274'\n\t\t},\n\t\t{\n\t\t\t__isgene: true,\n\t\t\tfile: 'anno/gencode.v41.hg38.gz',\n\t\t\ttranslatecoding: true,\n\t\t\tcategories: {\n\t\t\t\tcoding: {\n\t\t\t\t\tcolor: '#004D99',\n\t\t\t\t\tlabel: 'Coding gene'\n\t\t\t\t},\n\t\t\t\tnonCoding: {\n\t\t\t\t\tcolor: '#009933',\n\t\t\t\t\tlabel: 'Noncoding gene'\n\t\t\t\t},\n\t\t\t\tproblem: {\n\t\t\t\t\tcolor: 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'ClinVar'\n\t\t},\n\t\tSJLife: {\n\t\t\tisMds3: true,\n\t\t\tnoHandleOnClient: 1,\n\t\t\tlabel: 'SJLife'\n\t\t},\n\t\tMB_meta_analysis: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'MB_meta_analysis'\n\t\t},\n\t\tASH: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'ASH'\n\t\t},\n\t\t'ALL-pharmacotyping': {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'ALL-pharmacotyping'\n\t\t},\n\t\tGDC: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'GDC'\n\t\t},\n\t\tIHG: {\n\t\t\tisMds3: true,\n\t\t\tlabel: 'IHG'\n\t\t}\n\t},\n\ttermdbs: {\n\t\tmsigdb: {\n\t\t\tlabel: 'MSigDB'\n\t\t}\n\t},\n\ttkset: [],\n\tisoformcache: {},\n\tjunctionframecache: {},\n\tchrlookup: {\n\t\tCHR1: {\n\t\t\tname: 'chr1',\n\t\t\tlen: 248956422,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR2: {\n\t\t\tname: 'chr2',\n\t\t\tlen: 242193529,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR3: {\n\t\t\tname: 'chr3',\n\t\t\tlen: 198295559,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR4: {\n\t\t\tname: 'chr4',\n\t\t\tlen: 190214555,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR5: {\n\t\t\tname: 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true\n\t\t},\n\t\tCHR17: {\n\t\t\tname: 'chr17',\n\t\t\tlen: 83257441,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR18: {\n\t\t\tname: 'chr18',\n\t\t\tlen: 80373285,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR19: {\n\t\t\tname: 'chr19',\n\t\t\tlen: 58617616,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR20: {\n\t\t\tname: 'chr20',\n\t\t\tlen: 64444167,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR21: {\n\t\t\tname: 'chr21',\n\t\t\tlen: 46709983,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR22: {\n\t\t\tname: 'chr22',\n\t\t\tlen: 50818468,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRX: {\n\t\t\tname: 'chrX',\n\t\t\tlen: 156040895,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRY: {\n\t\t\tname: 'chrY',\n\t\t\tlen: 57227415,\n\t\t\tmajor: true\n\t\t},\n\t\tCHRM: {\n\t\t\tname: 'chrM',\n\t\t\tlen: 16569,\n\t\t\tmajor: true\n\t\t},\n\t\tCHR15_KI270905V1_ALT: {\n\t\t\tname: 'chr15_KI270905v1_alt',\n\t\t\tlen: 5161414\n\t\t},\n\t\tCHR6_GL000256V2_ALT: {\n\t\t\tname: 'chr6_GL000256v2_alt',\n\t\t\tlen: 4929269\n\t\t},\n\t\tCHR6_GL000254V2_ALT: {\n\t\t\tname: 'chr6_GL000254v2_alt',\n\t\t\tlen: 4827813\n\t\t},\n\t\tCHR6_GL000251V2_ALT: {\n\t\t\tname: 'chr6_GL000251v2_alt',\n\t\t\tlen: 4795265\n\t\t},\n\t\tCHR6_GL000253V2_ALT: {\n\t\t\tname: 'chr6_GL000253v2_alt',\n\t\t\tlen: 4677643\n\t\t},\n\t\tCHR6_GL000250V2_ALT: {\n\t\t\tname: 'chr6_GL000250v2_alt',\n\t\t\tlen: 4672374\n\t\t},\n\t\tCHR6_GL000255V2_ALT: {\n\t\t\tname: 'chr6_GL000255v2_alt',\n\t\t\tlen: 4606388\n\t\t},\n\t\tCHR6_GL000252V2_ALT: {\n\t\t\tname: 'chr6_GL000252v2_alt',\n\t\t\tlen: 4604811\n\t\t},\n\t\tCHR17_KI270857V1_ALT: {\n\t\t\tname: 'chr17_KI270857v1_alt',\n\t\t\tlen: 2877074\n\t\t},\n\t\tCHR16_KI270853V1_ALT: {\n\t\t\tname: 'chr16_KI270853v1_alt',\n\t\t\tlen: 2659700\n\t\t},\n\t\tCHR16_KI270728V1_RANDOM: {\n\t\t\tname: 'chr16_KI270728v1_random',\n\t\t\tlen: 1872759\n\t\t},\n\t\tCHR17_GL000258V2_ALT: {\n\t\t\tname: 'chr17_GL000258v2_alt',\n\t\t\tlen: 1821992\n\t\t},\n\t\tCHR5_GL339449V2_ALT: {\n\t\t\tname: 'chr5_GL339449v2_alt',\n\t\t\tlen: 1612928\n\t\t},\n\t\tCHR14_KI270847V1_ALT: {\n\t\t\tname: 'chr14_KI270847v1_alt',\n\t\t\tlen: 1511111\n\t\t},\n\t\tCHR17_KI270908V1_ALT: {\n\t\t\tname: 'chr17_KI270908v1_alt',\n\t\t\tlen: 1423190\n\t\t},\n\t\tCHR14_KI270846V1_ALT: {\n\t\t\tname: 'chr14_KI270846v1_alt',\n\t\t\tlen: 1351393\n\t\t},\n\t\tCHR5_KI270897V1_ALT: {\n\t\t\tname: 'chr5_KI270897v1_alt',\n\t\t\tlen: 1144418\n\t\t},\n\t\tCHR7_KI270803V1_ALT: {\n\t\t\tname: 'chr7_KI270803v1_alt',\n\t\t\tlen: 1111570\n\t\t},\n\t\tCHR19_GL949749V2_ALT: {\n\t\t\tname: 'chr19_GL949749v2_alt',\n\t\t\tlen: 1091841\n\t\t},\n\t\tCHR19_KI270938V1_ALT: {\n\t\t\tname: 'chr19_KI270938v1_alt',\n\t\t\tlen: 1066800\n\t\t},\n\t\tCHR19_GL949750V2_ALT: {\n\t\t\tname: 'chr19_GL949750v2_alt',\n\t\t\tlen: 1066390\n\t\t},\n\t\tCHR19_GL949748V2_ALT: {\n\t\t\tname: 'chr19_GL949748v2_alt',\n\t\t\tlen: 1064304\n\t\t},\n\t\tCHR19_GL949751V2_ALT: {\n\t\t\tname: 'chr19_GL949751v2_alt',\n\t\t\tlen: 1002683\n\t\t},\n\t\tCHR19_GL949746V1_ALT: {\n\t\t\tname: 'chr19_GL949746v1_alt',\n\t\t\tlen: 987716\n\t\t},\n\t\tCHR19_GL949752V1_ALT: {\n\t\t\tname: 'chr19_GL949752v1_alt',\n\t\t\tlen: 987100\n\t\t},\n\t\tCHR8_KI270821V1_ALT: {\n\t\t\tname: 'chr8_KI270821v1_alt',\n\t\t\tlen: 985506\n\t\t},\n\t\tCHR1_KI270763V1_ALT: {\n\t\t\tname: 'chr1_KI270763v1_alt',\n\t\t\tlen: 911658\n\t\t},\n\t\tCHR6_KI270801V1_ALT: {\n\t\t\tname: 'chr6_KI270801v1_alt',\n\t\t\tlen: 870480\n\t\t},\n\t\tCHR19_GL949753V2_ALT: {\n\t\t\tname: 'chr19_GL949753v2_alt',\n\t\t\tlen: 796479\n\t\t},\n\t\tCHR19_GL949747V2_ALT: {\n\t\t\tname: 'chr19_GL949747v2_alt',\n\t\t\tlen: 729520\n\t\t},\n\t\tCHR8_KI270822V1_ALT: {\n\t\t\tname: 'chr8_KI270822v1_alt',\n\t\t\tlen: 624492\n\t\t},\n\t\tCHR4_GL000257V2_ALT: {\n\t\t\tname: 'chr4_GL000257v2_alt',\n\t\t\tlen: 586476\n\t\t},\n\t\tCHR12_KI270904V1_ALT: {\n\t\t\tname: 'chr12_KI270904v1_alt',\n\t\t\tlen: 572349\n\t\t},\n\t\tCHR4_KI270925V1_ALT: {\n\t\t\tname: 'chr4_KI270925v1_alt',\n\t\t\tlen: 555799\n\t\t},\n\t\tCHR15_KI270852V1_ALT: {\n\t\t\tname: 'chr15_KI270852v1_alt',\n\t\t\tlen: 478999\n\t\t},\n\t\tCHR15_KI270727V1_RANDOM: {\n\t\t\tname: 'chr15_KI270727v1_random',\n\t\t\tlen: 448248\n\t\t},\n\t\tCHR9_KI270823V1_ALT: {\n\t\t\tname: 'chr9_KI270823v1_alt',\n\t\t\tlen: 439082\n\t\t},\n\t\tCHR15_KI270850V1_ALT: {\n\t\t\tname: 'chr15_KI270850v1_alt',\n\t\t\tlen: 430880\n\t\t},\n\t\tCHR1_KI270759V1_ALT: {\n\t\t\tname: 'chr1_KI270759v1_alt',\n\t\t\tlen: 425601\n\t\t},\n\t\tCHR12_GL877876V1_ALT: {\n\t\t\tname: 'chr12_GL877876v1_alt',\n\t\t\tlen: 408271\n\t\t},\n\t\tCHRUN_KI270442V1: {\n\t\t\tname: 'chrUn_KI270442v1',\n\t\t\tlen: 392061\n\t\t},\n\t\tCHR17_KI270862V1_ALT: {\n\t\t\tname: 'chr17_KI270862v1_alt',\n\t\t\tlen: 391357\n\t\t},\n\t\tCHR15_GL383555V2_ALT: {\n\t\t\tname: 'chr15_GL383555v2_alt',\n\t\t\tlen: 388773\n\t\t},\n\t\tCHR19_GL383573V1_ALT: {\n\t\t\tname: 'chr19_GL383573v1_alt',\n\t\t\tlen: 385657\n\t\t},\n\t\tCHR4_KI270896V1_ALT: {\n\t\t\tname: 'chr4_KI270896v1_alt',\n\t\t\tlen: 378547\n\t\t},\n\t\tCHR4_GL383528V1_ALT: {\n\t\t\tname: 'chr4_GL383528v1_alt',\n\t\t\tlen: 376187\n\t\t},\n\t\tCHR17_GL383563V3_ALT: {\n\t\t\tname: 'chr17_GL383563v3_alt',\n\t\t\tlen: 375691\n\t\t},\n\t\tCHR8_KI270810V1_ALT: {\n\t\t\tname: 'chr8_KI270810v1_alt',\n\t\t\tlen: 374415\n\t\t},\n\t\tCHR1_GL383520V2_ALT: {\n\t\t\tname: 'chr1_GL383520v2_alt',\n\t\t\tlen: 366580\n\t\t},\n\t\tCHR1_KI270762V1_ALT: {\n\t\t\tname: 'chr1_KI270762v1_alt',\n\t\t\tlen: 354444\n\t\t},\n\t\tCHR15_KI270848V1_ALT: {\n\t\t\tname: 'chr15_KI270848v1_alt',\n\t\t\tlen: 327382\n\t\t},\n\t\tCHR17_KI270909V1_ALT: {\n\t\t\tname: 'chr17_KI270909v1_alt',\n\t\t\tlen: 325800\n\t\t},\n\t\tCHR14_KI270844V1_ALT: {\n\t\t\tname: 'chr14_KI270844v1_alt',\n\t\t\tlen: 322166\n\t\t},\n\t\tCHR8_KI270900V1_ALT: {\n\t\t\tname: 'chr8_KI270900v1_alt',\n\t\t\tlen: 318687\n\t\t},\n\t\tCHR10_GL383546V1_ALT: {\n\t\t\tname: 'chr10_GL383546v1_alt',\n\t\t\tlen: 309802\n\t\t},\n\t\tCHR13_KI270838V1_ALT: {\n\t\t\tname: 'chr13_KI270838v1_alt',\n\t\t\tlen: 306913\n\t\t},\n\t\tCHR8_KI270816V1_ALT: {\n\t\t\tname: 'chr8_KI270816v1_alt',\n\t\t\tlen: 305841\n\t\t},\n\t\tCHR22_KI270879V1_ALT: {\n\t\t\tname: 'chr22_KI270879v1_alt',\n\t\t\tlen: 304135\n\t\t},\n\t\tCHR8_KI270813V1_ALT: {\n\t\t\tname: 'chr8_KI270813v1_alt',\n\t\t\tlen: 300230\n\t\t},\n\t\tCHR11_KI270831V1_ALT: {\n\t\t\tname: 'chr11_KI270831v1_alt',\n\t\t\tlen: 296895\n\t\t},\n\t\tCHR15_GL383554V1_ALT: {\n\t\t\tname: 'chr15_GL383554v1_alt',\n\t\t\tlen: 296527\n\t\t},\n\t\tCHR8_KI270811V1_ALT: {\n\t\t\tname: 'chr8_KI270811v1_alt',\n\t\t\tlen: 292436\n\t\t},\n\t\tCHR18_GL383567V1_ALT: {\n\t\t\tname: 'chr18_GL383567v1_alt',\n\t\t\tlen: 289831\n\t\t},\n\t\tCHRX_KI270880V1_ALT: {\n\t\t\tname: 'chrX_KI270880v1_alt',\n\t\t\tlen: 284869\n\t\t},\n\t\tCHR8_KI270812V1_ALT: {\n\t\t\tname: 'chr8_KI270812v1_alt',\n\t\t\tlen: 282736\n\t\t},\n\t\tCHR19_KI270921V1_ALT: {\n\t\t\tname: 'chr19_KI270921v1_alt',\n\t\t\tlen: 282224\n\t\t},\n\t\tCHR17_KI270729V1_RANDOM: {\n\t\t\tname: 'chr17_KI270729v1_random',\n\t\t\tlen: 280839\n\t\t},\n\t\tCHR17_JH159146V1_ALT: {\n\t\t\tname: 'chr17_JH159146v1_alt',\n\t\t\tlen: 278131\n\t\t},\n\t\tCHRX_KI270913V1_ALT: {\n\t\t\tname: 'chrX_KI270913v1_alt',\n\t\t\tlen: 274009\n\t\t},\n\t\tCHR6_KI270798V1_ALT: {\n\t\t\tname: 'chr6_KI270798v1_alt',\n\t\t\tlen: 271782\n\t\t},\n\t\tCHR7_KI270808V1_ALT: {\n\t\t\tname: 'chr7_KI270808v1_alt',\n\t\t\tlen: 271455\n\t\t},\n\t\tCHR22_KI270876V1_ALT: {\n\t\t\tname: 'chr22_KI270876v1_alt',\n\t\t\tlen: 263666\n\t\t},\n\t\tCHR15_KI270851V1_ALT: {\n\t\t\tname: 'chr15_KI270851v1_alt',\n\t\t\tlen: 263054\n\t\t},\n\t\tCHR22_KI270875V1_ALT: {\n\t\t\tname: 'chr22_KI270875v1_alt',\n\t\t\tlen: 259914\n\t\t},\n\t\tCHR1_KI270766V1_ALT: {\n\t\t\tname: 'chr1_KI270766v1_alt',\n\t\t\tlen: 256271\n\t\t},\n\t\tCHR19_KI270882V1_ALT: {\n\t\t\tname: 'chr19_KI270882v1_alt',\n\t\t\tlen: 248807\n\t\t},\n\t\tCHR3_KI270778V1_ALT: {\n\t\t\tname: 'chr3_KI270778v1_alt',\n\t\t\tlen: 248252\n\t\t},\n\t\tCHR15_KI270849V1_ALT: {\n\t\t\tname: 'chr15_KI270849v1_alt',\n\t\t\tlen: 244917\n\t\t},\n\t\tCHR4_KI270786V1_ALT: {\n\t\t\tname: 'chr4_KI270786v1_alt',\n\t\t\tlen: 244096\n\t\t},\n\t\tCHR12_KI270835V1_ALT: {\n\t\t\tname: 'chr12_KI270835v1_alt',\n\t\t\tlen: 238139\n\t\t},\n\t\tCHR17_KI270858V1_ALT: {\n\t\t\tname: 'chr17_KI270858v1_alt',\n\t\t\tlen: 235827\n\t\t},\n\t\tCHR19_KI270867V1_ALT: {\n\t\t\tname: 'chr19_KI270867v1_alt',\n\t\t\tlen: 233762\n\t\t},\n\t\tCHR16_KI270855V1_ALT: {\n\t\t\tname: 'chr16_KI270855v1_alt',\n\t\t\tlen: 232857\n\t\t},\n\t\tCHR8_KI270926V1_ALT: {\n\t\t\tname: 'chr8_KI270926v1_alt',\n\t\t\tlen: 229282\n\t\t},\n\t\tCHR5_GL949742V1_ALT: {\n\t\t\tname: 'chr5_GL949742v1_alt',\n\t\t\tlen: 226852\n\t\t},\n\t\tCHR3_KI270780V1_ALT: {\n\t\t\tname: 'chr3_KI270780v1_alt',\n\t\t\tlen: 224108\n\t\t},\n\t\tCHR17_GL383565V1_ALT: {\n\t\t\tname: 'chr17_GL383565v1_alt',\n\t\t\tlen: 223995\n\t\t},\n\t\tCHR2_KI270774V1_ALT: {\n\t\t\tname: 'chr2_KI270774v1_alt',\n\t\t\tlen: 223625\n\t\t},\n\t\tCHR4_KI270790V1_ALT: {\n\t\t\tname: 'chr4_KI270790v1_alt',\n\t\t\tlen: 220246\n\t\t},\n\t\tCHR11_KI270927V1_ALT: {\n\t\t\tname: 'chr11_KI270927v1_alt',\n\t\t\tlen: 218612\n\t\t},\n\t\tCHR19_KI270932V1_ALT: {\n\t\t\tname: 'chr19_KI270932v1_alt',\n\t\t\tlen: 215732\n\t\t},\n\t\tCHR11_KI270903V1_ALT: {\n\t\t\tname: 'chr11_KI270903v1_alt',\n\t\t\tlen: 214625\n\t\t},\n\t\tCHR2_KI270894V1_ALT: {\n\t\t\tname: 'chr2_KI270894v1_alt',\n\t\t\tlen: 214158\n\t\t},\n\t\tCHR14_GL000225V1_RANDOM: {\n\t\t\tname: 'chr14_GL000225v1_random',\n\t\t\tlen: 211173\n\t\t},\n\t\tCHRUN_KI270743V1: {\n\t\t\tname: 'chrUn_KI270743v1',\n\t\t\tlen: 210658\n\t\t},\n\t\tCHR11_KI270832V1_ALT: {\n\t\t\tname: 'chr11_KI270832v1_alt',\n\t\t\tlen: 210133\n\t\t},\n\t\tCHR7_KI270805V1_ALT: {\n\t\t\tname: 'chr7_KI270805v1_alt',\n\t\t\tlen: 209988\n\t\t},\n\t\tCHR4_GL000008V2_RANDOM: {\n\t\t\tname: 'chr4_GL000008v2_random',\n\t\t\tlen: 209709\n\t\t},\n\t\tCHR7_KI270809V1_ALT: {\n\t\t\tname: 'chr7_KI270809v1_alt',\n\t\t\tlen: 209586\n\t\t},\n\t\tCHR19_KI270887V1_ALT: {\n\t\t\tname: 'chr19_KI270887v1_alt',\n\t\t\tlen: 209512\n\t\t},\n\t\tCHR4_KI270789V1_ALT: {\n\t\t\tname: 'chr4_KI270789v1_alt',\n\t\t\tlen: 205944\n\t\t},\n\t\tCHR3_KI270779V1_ALT: {\n\t\t\tname: 'chr3_KI270779v1_alt',\n\t\t\tlen: 205312\n\t\t},\n\t\tCHR19_KI270914V1_ALT: {\n\t\t\tname: 'chr19_KI270914v1_alt',\n\t\t\tlen: 205194\n\t\t},\n\t\tCHR19_KI270886V1_ALT: {\n\t\t\tname: 'chr19_KI270886v1_alt',\n\t\t\tlen: 204239\n\t\t},\n\t\tCHR11_KI270829V1_ALT: {\n\t\t\tname: 'chr11_KI270829v1_alt',\n\t\t\tlen: 204059\n\t\t},\n\t\tCHR14_GL000009V2_RANDOM: {\n\t\t\tname: 'chr14_GL000009v2_random',\n\t\t\tlen: 201709\n\t\t},\n\t\tCHR21_GL383579V2_ALT: {\n\t\t\tname: 'chr21_GL383579v2_alt',\n\t\t\tlen: 201197\n\t\t},\n\t\tCHR11_JH159136V1_ALT: {\n\t\t\tname: 'chr11_JH159136v1_alt',\n\t\t\tlen: 200998\n\t\t},\n\t\tCHR19_KI270930V1_ALT: {\n\t\t\tname: 'chr19_KI270930v1_alt',\n\t\t\tlen: 200773\n\t\t},\n\t\tCHRUN_KI270747V1: {\n\t\t\tname: 'chrUn_KI270747v1',\n\t\t\tlen: 198735\n\t\t},\n\t\tCHR18_GL383571V1_ALT: {\n\t\t\tname: 'chr18_GL383571v1_alt',\n\t\t\tlen: 198278\n\t\t},\n\t\tCHR19_KI270920V1_ALT: {\n\t\t\tname: 'chr19_KI270920v1_alt',\n\t\t\tlen: 198005\n\t\t},\n\t\tCHR6_KI270797V1_ALT: {\n\t\t\tname: 'chr6_KI270797v1_alt',\n\t\t\tlen: 197536\n\t\t},\n\t\tCHR3_KI270935V1_ALT: {\n\t\t\tname: 'chr3_KI270935v1_alt',\n\t\t\tlen: 197351\n\t\t},\n\t\tCHR17_KI270861V1_ALT: {\n\t\t\tname: 'chr17_KI270861v1_alt',\n\t\t\tlen: 196688\n\t\t},\n\t\tCHR15_KI270906V1_ALT: {\n\t\t\tname: 'chr15_KI270906v1_alt',\n\t\t\tlen: 196384\n\t\t},\n\t\tCHR5_KI270791V1_ALT: {\n\t\t\tname: 'chr5_KI270791v1_alt',\n\t\t\tlen: 195710\n\t\t},\n\t\tCHR14_KI270722V1_RANDOM: {\n\t\t\tname: 'chr14_KI270722v1_random',\n\t\t\tlen: 194050\n\t\t},\n\t\tCHR16_GL383556V1_ALT: {\n\t\t\tname: 'chr16_GL383556v1_alt',\n\t\t\tlen: 192462\n\t\t},\n\t\tCHR13_KI270840V1_ALT: {\n\t\t\tname: 'chr13_KI270840v1_alt',\n\t\t\tlen: 191684\n\t\t},\n\t\tCHR14_GL000194V1_RANDOM: {\n\t\t\tname: 'chr14_GL000194v1_random',\n\t\t\tlen: 191469\n\t\t},\n\t\tCHR11_JH159137V1_ALT: {\n\t\t\tname: 'chr11_JH159137v1_alt',\n\t\t\tlen: 191409\n\t\t},\n\t\tCHR19_KI270917V1_ALT: {\n\t\t\tname: 'chr19_KI270917v1_alt',\n\t\t\tlen: 190932\n\t\t},\n\t\tCHR7_KI270899V1_ALT: {\n\t\t\tname: 'chr7_KI270899v1_alt',\n\t\t\tlen: 190869\n\t\t},\n\t\tCHR19_KI270923V1_ALT: {\n\t\t\tname: 'chr19_KI270923v1_alt',\n\t\t\tlen: 189352\n\t\t},\n\t\tCHR10_KI270825V1_ALT: {\n\t\t\tname: 'chr10_KI270825v1_alt',\n\t\t\tlen: 188315\n\t\t},\n\t\tCHR19_GL383576V1_ALT: {\n\t\t\tname: 'chr19_GL383576v1_alt',\n\t\t\tlen: 188024\n\t\t},\n\t\tCHR19_KI270922V1_ALT: {\n\t\t\tname: 'chr19_KI270922v1_alt',\n\t\t\tlen: 187935\n\t\t},\n\t\tCHRUN_KI270742V1: {\n\t\t\tname: 'chrUn_KI270742v1',\n\t\t\tlen: 186739\n\t\t},\n\t\tCHR22_KI270878V1_ALT: {\n\t\t\tname: 'chr22_KI270878v1_alt',\n\t\t\tlen: 186262\n\t\t},\n\t\tCHR19_KI270929V1_ALT: {\n\t\t\tname: 'chr19_KI270929v1_alt',\n\t\t\tlen: 186203\n\t\t},\n\t\tCHR11_KI270826V1_ALT: {\n\t\t\tname: 'chr11_KI270826v1_alt',\n\t\t\tlen: 186169\n\t\t},\n\t\tCHR6_KB021644V2_ALT: {\n\t\t\tname: 'chr6_KB021644v2_alt',\n\t\t\tlen: 185823\n\t\t},\n\t\tCHR17_GL000205V2_RANDOM: {\n\t\t\tname: 'chr17_GL000205v2_random',\n\t\t\tlen: 185591\n\t\t},\n\t\tCHR1_KI270765V1_ALT: {\n\t\t\tname: 'chr1_KI270765v1_alt',\n\t\t\tlen: 185285\n\t\t},\n\t\tCHR19_KI270916V1_ALT: {\n\t\t\tname: 'chr19_KI270916v1_alt',\n\t\t\tlen: 184516\n\t\t},\n\t\tCHR19_KI270890V1_ALT: {\n\t\t\tname: 'chr19_KI270890v1_alt',\n\t\t\tlen: 184499\n\t\t},\n\t\tCHR3_KI270784V1_ALT: {\n\t\t\tname: 'chr3_KI270784v1_alt',\n\t\t\tlen: 184404\n\t\t},\n\t\tCHR12_GL383551V1_ALT: {\n\t\t\tname: 'chr12_GL383551v1_alt',\n\t\t\tlen: 184319\n\t\t},\n\t\tCHR20_KI270870V1_ALT: {\n\t\t\tname: 'chr20_KI270870v1_alt',\n\t\t\tlen: 183433\n\t\t},\n\t\tCHRUN_GL000195V1: {\n\t\t\tname: 'chrUn_GL000195v1',\n\t\t\tlen: 182896\n\t\t},\n\t\tCHR1_GL383518V1_ALT: {\n\t\t\tname: 'chr1_GL383518v1_alt',\n\t\t\tlen: 182439\n\t\t},\n\t\tCHR22_KI270736V1_RANDOM: {\n\t\t\tname: 'chr22_KI270736v1_random',\n\t\t\tlen: 181920\n\t\t},\n\t\tCHR10_KI270824V1_ALT: {\n\t\t\tname: 'chr10_KI270824v1_alt',\n\t\t\tlen: 181496\n\t\t},\n\t\tCHR14_KI270845V1_ALT: {\n\t\t\tname: 'chr14_KI270845v1_alt',\n\t\t\tlen: 180703\n\t\t},\n\t\tCHR3_GL383526V1_ALT: {\n\t\t\tname: 'chr3_GL383526v1_alt',\n\t\t\tlen: 180671\n\t\t},\n\t\tCHR13_KI270839V1_ALT: {\n\t\t\tname: 'chr13_KI270839v1_alt',\n\t\t\tlen: 180306\n\t\t},\n\t\tCHR22_KI270733V1_RANDOM: {\n\t\t\tname: 'chr22_KI270733v1_random',\n\t\t\tlen: 179772\n\t\t},\n\t\tCHRUN_GL000224V1: {\n\t\t\tname: 'chrUn_GL000224v1',\n\t\t\tlen: 179693\n\t\t},\n\t\tCHR10_GL383545V1_ALT: {\n\t\t\tname: 'chr10_GL383545v1_alt',\n\t\t\tlen: 179254\n\t\t},\n\t\tCHRUN_GL000219V1: {\n\t\t\tname: 'chrUn_GL000219v1',\n\t\t\tlen: 179198\n\t\t},\n\t\tCHR5_KI270792V1_ALT: {\n\t\t\tname: 'chr5_KI270792v1_alt',\n\t\t\tlen: 179043\n\t\t},\n\t\tCHR17_KI270860V1_ALT: {\n\t\t\tname: 'chr17_KI270860v1_alt',\n\t\t\tlen: 178921\n\t\t},\n\t\tCHR19_GL000209V2_ALT: {\n\t\t\tname: 'chr19_GL000209v2_alt',\n\t\t\tlen: 177381\n\t\t},\n\t\tCHR11_KI270830V1_ALT: {\n\t\t\tname: 'chr11_KI270830v1_alt',\n\t\t\tlen: 177092\n\t\t},\n\t\tCHR9_KI270719V1_RANDOM: {\n\t\t\tname: 'chr9_KI270719v1_random',\n\t\t\tlen: 176845\n\t\t},\n\t\tCHRUN_GL000216V2: {\n\t\t\tname: 'chrUn_GL000216v2',\n\t\t\tlen: 176608\n\t\t},\n\t\tCHR22_KI270928V1_ALT: {\n\t\t\tname: 'chr22_KI270928v1_alt',\n\t\t\tlen: 176103\n\t\t},\n\t\tCHR1_KI270712V1_RANDOM: {\n\t\t\tname: 'chr1_KI270712v1_random',\n\t\t\tlen: 176043\n\t\t},\n\t\tCHR6_KI270800V1_ALT: {\n\t\t\tname: 'chr6_KI270800v1_alt',\n\t\t\tlen: 175808\n\t\t},\n\t\tCHR1_KI270706V1_RANDOM: {\n\t\t\tname: 'chr1_KI270706v1_random',\n\t\t\tlen: 175055\n\t\t},\n\t\tCHR2_KI270776V1_ALT: {\n\t\t\tname: 'chr2_KI270776v1_alt',\n\t\t\tlen: 174166\n\t\t},\n\t\tCHR18_KI270912V1_ALT: {\n\t\t\tname: 'chr18_KI270912v1_alt',\n\t\t\tlen: 174061\n\t\t},\n\t\tCHR3_KI270777V1_ALT: {\n\t\t\tname: 'chr3_KI270777v1_alt',\n\t\t\tlen: 173649\n\t\t},\n\t\tCHR5_GL383531V1_ALT: {\n\t\t\tname: 'chr5_GL383531v1_alt',\n\t\t\tlen: 173459\n\t\t},\n\t\tCHR3_JH636055V2_ALT: {\n\t\t\tname: 'chr3_JH636055v2_alt',\n\t\t\tlen: 173151\n\t\t},\n\t\tCHR14_KI270725V1_RANDOM: {\n\t\t\tname: 'chr14_KI270725v1_random',\n\t\t\tlen: 172810\n\t\t},\n\t\tCHR5_KI270796V1_ALT: {\n\t\t\tname: 'chr5_KI270796v1_alt',\n\t\t\tlen: 172708\n\t\t},\n\t\tCHR9_GL383541V1_ALT: {\n\t\t\tname: 'chr9_GL383541v1_alt',\n\t\t\tlen: 171286\n\t\t},\n\t\tCHR19_KI270885V1_ALT: {\n\t\t\tname: 'chr19_KI270885v1_alt',\n\t\t\tlen: 171027\n\t\t},\n\t\tCHR19_KI270919V1_ALT: {\n\t\t\tname: 'chr19_KI270919v1_alt',\n\t\t\tlen: 170701\n\t\t},\n\t\tCHR19_KI270889V1_ALT: {\n\t\t\tname: 'chr19_KI270889v1_alt',\n\t\t\tlen: 170698\n\t\t},\n\t\tCHR19_KI270891V1_ALT: {\n\t\t\tname: 'chr19_KI270891v1_alt',\n\t\t\tlen: 170680\n\t\t},\n\t\tCHR19_KI270915V1_ALT: {\n\t\t\tname: 'chr19_KI270915v1_alt',\n\t\t\tlen: 170665\n\t\t},\n\t\tCHR19_KI270933V1_ALT: {\n\t\t\tname: 'chr19_KI270933v1_alt',\n\t\t\tlen: 170537\n\t\t},\n\t\tCHR19_KI270883V1_ALT: {\n\t\t\tname: 'chr19_KI270883v1_alt',\n\t\t\tlen: 170399\n\t\t},\n\t\tCHR19_GL383575V2_ALT: {\n\t\t\tname: 'chr19_GL383575v2_alt',\n\t\t\tlen: 170222\n\t\t},\n\t\tCHR19_KI270931V1_ALT: {\n\t\t\tname: 'chr19_KI270931v1_alt',\n\t\t\tlen: 170148\n\t\t},\n\t\tCHR12_GL383550V2_ALT: {\n\t\t\tname: 'chr12_GL383550v2_alt',\n\t\t\tlen: 169178\n\t\t},\n\t\tCHR13_KI270841V1_ALT: {\n\t\t\tname: 'chr13_KI270841v1_alt',\n\t\t\tlen: 169134\n\t\t},\n\t\tCHRUN_KI270744V1: {\n\t\t\tname: 'chrUn_KI270744v1',\n\t\t\tlen: 168472\n\t\t},\n\t\tCHR18_KI270863V1_ALT: {\n\t\t\tname: 'chr18_KI270863v1_alt',\n\t\t\tlen: 167999\n\t\t},\n\t\tCHR18_GL383569V1_ALT: {\n\t\t\tname: 'chr18_GL383569v1_alt',\n\t\t\tlen: 167950\n\t\t},\n\t\tCHR12_GL877875V1_ALT: {\n\t\t\tname: 'chr12_GL877875v1_alt',\n\t\t\tlen: 167313\n\t\t},\n\t\tCHR21_KI270874V1_ALT: {\n\t\t\tname: 'chr21_KI270874v1_alt',\n\t\t\tlen: 166743\n\t\t},\n\t\tCHR3_KI270924V1_ALT: {\n\t\t\tname: 'chr3_KI270924v1_alt',\n\t\t\tlen: 166540\n\t\t},\n\t\tCHR1_KI270761V1_ALT: {\n\t\t\tname: 'chr1_KI270761v1_alt',\n\t\t\tlen: 165834\n\t\t},\n\t\tCHR3_KI270937V1_ALT: {\n\t\t\tname: 'chr3_KI270937v1_alt',\n\t\t\tlen: 165607\n\t\t},\n\t\tCHR22_KI270734V1_RANDOM: {\n\t\t\tname: 'chr22_KI270734v1_random',\n\t\t\tlen: 165050\n\t\t},\n\t\tCHR18_GL383570V1_ALT: {\n\t\t\tname: 'chr18_GL383570v1_alt',\n\t\t\tlen: 164789\n\t\t},\n\t\tCHR5_KI270794V1_ALT: {\n\t\t\tname: 'chr5_KI270794v1_alt',\n\t\t\tlen: 164558\n\t\t},\n\t\tCHR4_GL383527V1_ALT: {\n\t\t\tname: 'chr4_GL383527v1_alt',\n\t\t\tlen: 164536\n\t\t},\n\t\tCHRUN_GL000213V1: {\n\t\t\tname: 'chrUn_GL000213v1',\n\t\t\tlen: 164239\n\t\t},\n\t\tCHR3_KI270936V1_ALT: {\n\t\t\tname: 'chr3_KI270936v1_alt',\n\t\t\tlen: 164170\n\t\t},\n\t\tCHR3_KI270934V1_ALT: {\n\t\t\tname: 'chr3_KI270934v1_alt',\n\t\t\tlen: 163458\n\t\t},\n\t\tCHR9_GL383539V1_ALT: {\n\t\t\tname: 'chr9_GL383539v1_alt',\n\t\t\tlen: 162988\n\t\t},\n\t\tCHR3_KI270895V1_ALT: {\n\t\t\tname: 'chr3_KI270895v1_alt',\n\t\t\tlen: 162896\n\t\t},\n\t\tCHR22_GL383582V2_ALT: {\n\t\t\tname: 'chr22_GL383582v2_alt',\n\t\t\tlen: 162811\n\t\t},\n\t\tCHR3_KI270782V1_ALT: {\n\t\t\tname: 'chr3_KI270782v1_alt',\n\t\t\tlen: 162429\n\t\t},\n\t\tCHR1_KI270892V1_ALT: {\n\t\t\tname: 'chr1_KI270892v1_alt',\n\t\t\tlen: 162212\n\t\t},\n\t\tCHRUN_GL000220V1: {\n\t\t\tname: 'chrUn_GL000220v1',\n\t\t\tlen: 161802\n\t\t},\n\t\tCHR2_KI270767V1_ALT: {\n\t\t\tname: 'chr2_KI270767v1_alt',\n\t\t\tlen: 161578\n\t\t},\n\t\tCHR2_KI270715V1_RANDOM: {\n\t\t\tname: 'chr2_KI270715v1_random',\n\t\t\tlen: 161471\n\t\t},\n\t\tCHR2_KI270893V1_ALT: {\n\t\t\tname: 'chr2_KI270893v1_alt',\n\t\t\tlen: 161218\n\t\t},\n\t\tCHRUN_GL000218V1: {\n\t\t\tname: 'chrUn_GL000218v1',\n\t\t\tlen: 161147\n\t\t},\n\t\tCHR18_GL383572V1_ALT: {\n\t\t\tname: 'chr18_GL383572v1_alt',\n\t\t\tlen: 159547\n\t\t},\n\t\tCHR8_KI270817V1_ALT: {\n\t\t\tname: 'chr8_KI270817v1_alt',\n\t\t\tlen: 158983\n\t\t},\n\t\tCHR4_KI270788V1_ALT: {\n\t\t\tname: 'chr4_KI270788v1_alt',\n\t\t\tlen: 158965\n\t\t},\n\t\tCHRUN_KI270749V1: {\n\t\t\tname: 'chrUn_KI270749v1',\n\t\t\tlen: 158759\n\t\t},\n\t\tCHR7_KI270806V1_ALT: {\n\t\t\tname: 'chr7_KI270806v1_alt',\n\t\t\tlen: 158166\n\t\t},\n\t\tCHR7_KI270804V1_ALT: {\n\t\t\tname: 'chr7_KI270804v1_alt',\n\t\t\tlen: 157952\n\t\t},\n\t\tCHR18_KI270911V1_ALT: {\n\t\t\tname: 'chr18_KI270911v1_alt',\n\t\t\tlen: 157710\n\t\t},\n\t\tCHRUN_KI270741V1: {\n\t\t\tname: 'chrUn_KI270741v1',\n\t\t\tlen: 157432\n\t\t},\n\t\tCHR17_KI270910V1_ALT: {\n\t\t\tname: 'chr17_KI270910v1_alt',\n\t\t\tlen: 157099\n\t\t},\n\t\tCHR19_KI270884V1_ALT: {\n\t\t\tname: 'chr19_KI270884v1_alt',\n\t\t\tlen: 157053\n\t\t},\n\t\tCHR19_GL383574V1_ALT: {\n\t\t\tname: 'chr19_GL383574v1_alt',\n\t\t\tlen: 155864\n\t\t},\n\t\tCHR19_KI270888V1_ALT: {\n\t\t\tname: 'chr19_KI270888v1_alt',\n\t\t\tlen: 155532\n\t\t},\n\t\tCHR3_GL000221V1_RANDOM: {\n\t\t\tname: 'chr3_GL000221v1_random',\n\t\t\tlen: 155397\n\t\t},\n\t\tCHR11_GL383547V1_ALT: {\n\t\t\tname: 'chr11_GL383547v1_alt',\n\t\t\tlen: 154407\n\t\t},\n\t\tCHR2_KI270716V1_RANDOM: {\n\t\t\tname: 'chr2_KI270716v1_random',\n\t\t\tlen: 153799\n\t\t},\n\t\tCHR12_GL383553V2_ALT: {\n\t\t\tname: 'chr12_GL383553v2_alt',\n\t\t\tlen: 152874\n\t\t},\n\t\tCHR6_KI270799V1_ALT: {\n\t\t\tname: 'chr6_KI270799v1_alt',\n\t\t\tlen: 152148\n\t\t},\n\t\tCHR22_KI270731V1_RANDOM: {\n\t\t\tname: 'chr22_KI270731v1_random',\n\t\t\tlen: 150754\n\t\t},\n\t\tCHRUN_KI270751V1: {\n\t\t\tname: 'chrUn_KI270751v1',\n\t\t\tlen: 150742\n\t\t},\n\t\tCHRUN_KI270750V1: {\n\t\t\tname: 'chrUn_KI270750v1',\n\t\t\tlen: 148850\n\t\t},\n\t\tCHR8_KI270818V1_ALT: {\n\t\t\tname: 'chr8_KI270818v1_alt',\n\t\t\tlen: 145606\n\t\t},\n\t\tCHRX_KI270881V1_ALT: {\n\t\t\tname: 'chrX_KI270881v1_alt',\n\t\t\tlen: 144206\n\t\t},\n\t\tCHR21_KI270873V1_ALT: {\n\t\t\tname: 'chr21_KI270873v1_alt',\n\t\t\tlen: 143900\n\t\t},\n\t\tCHR2_GL383521V1_ALT: {\n\t\t\tname: 'chr2_GL383521v1_alt',\n\t\t\tlen: 143390\n\t\t},\n\t\tCHR8_KI270814V1_ALT: {\n\t\t\tname: 'chr8_KI270814v1_alt',\n\t\t\tlen: 141812\n\t\t},\n\t\tCHR12_GL383552V1_ALT: {\n\t\t\tname: 'chr12_GL383552v1_alt',\n\t\t\tlen: 138655\n\t\t},\n\t\tCHRUN_KI270519V1: {\n\t\t\tname: 'chrUn_KI270519v1',\n\t\t\tlen: 138126\n\t\t},\n\t\tCHR2_KI270775V1_ALT: {\n\t\t\tname: 'chr2_KI270775v1_alt',\n\t\t\tlen: 138019\n\t\t},\n\t\tCHR17_KI270907V1_ALT: {\n\t\t\tname: 'chr17_KI270907v1_alt',\n\t\t\tlen: 137721\n\t\t},\n\t\tCHRUN_GL000214V1: {\n\t\t\tname: 'chrUn_GL000214v1',\n\t\t\tlen: 137718\n\t\t},\n\t\tCHR8_KI270901V1_ALT: {\n\t\t\tname: 'chr8_KI270901v1_alt',\n\t\t\tlen: 136959\n\t\t},\n\t\tCHR2_KI270770V1_ALT: {\n\t\t\tname: 'chr2_KI270770v1_alt',\n\t\t\tlen: 136240\n\t\t},\n\t\tCHR16_KI270854V1_ALT: {\n\t\t\tname: 'chr16_KI270854v1_alt',\n\t\t\tlen: 134193\n\t\t},\n\t\tCHR8_KI270819V1_ALT: {\n\t\t\tname: 'chr8_KI270819v1_alt',\n\t\t\tlen: 133535\n\t\t},\n\t\tCHR17_GL383564V2_ALT: {\n\t\t\tname: 'chr17_GL383564v2_alt',\n\t\t\tlen: 133151\n\t\t},\n\t\tCHR2_KI270772V1_ALT: {\n\t\t\tname: 'chr2_KI270772v1_alt',\n\t\t\tlen: 133041\n\t\t},\n\t\tCHR8_KI270815V1_ALT: {\n\t\t\tname: 'chr8_KI270815v1_alt',\n\t\t\tlen: 132244\n\t\t},\n\t\tCHR5_KI270795V1_ALT: {\n\t\t\tname: 'chr5_KI270795v1_alt',\n\t\t\tlen: 131892\n\t\t},\n\t\tCHR5_KI270898V1_ALT: {\n\t\t\tname: 'chr5_KI270898v1_alt',\n\t\t\tlen: 130957\n\t\t},\n\t\tCHR20_GL383577V2_ALT: {\n\t\t\tname: 'chr20_GL383577v2_alt',\n\t\t\tlen: 128386\n\t\t},\n\t\tCHR1_KI270708V1_RANDOM: {\n\t\t\tname: 'chr1_KI270708v1_random',\n\t\t\tlen: 127682\n\t\t},\n\t\tCHR7_KI270807V1_ALT: {\n\t\t\tname: 'chr7_KI270807v1_alt',\n\t\t\tlen: 126434\n\t\t},\n\t\tCHR5_KI270793V1_ALT: {\n\t\t\tname: 'chr5_KI270793v1_alt',\n\t\t\tlen: 126136\n\t\t},\n\t\tCHR6_GL383533V1_ALT: {\n\t\t\tname: 'chr6_GL383533v1_alt',\n\t\t\tlen: 124736\n\t\t},\n\t\tCHR2_GL383522V1_ALT: {\n\t\t\tname: 'chr2_GL383522v1_alt',\n\t\t\tlen: 123821\n\t\t},\n\t\tCHR19_KI270918V1_ALT: {\n\t\t\tname: 'chr19_KI270918v1_alt',\n\t\t\tlen: 123111\n\t\t},\n\t\tCHR12_GL383549V1_ALT: {\n\t\t\tname: 'chr12_GL383549v1_alt',\n\t\t\tlen: 120804\n\t\t},\n\t\tCHR2_KI270769V1_ALT: {\n\t\t\tname: 'chr2_KI270769v1_alt',\n\t\t\tlen: 120616\n\t\t},\n\t\tCHR4_KI270785V1_ALT: {\n\t\t\tname: 'chr4_KI270785v1_alt',\n\t\t\tlen: 119912\n\t\t},\n\t\tCHR12_KI270834V1_ALT: {\n\t\t\tname: 'chr12_KI270834v1_alt',\n\t\t\tlen: 119498\n\t\t},\n\t\tCHR7_GL383534V2_ALT: {\n\t\t\tname: 'chr7_GL383534v2_alt',\n\t\t\tlen: 119183\n\t\t},\n\t\tCHR20_KI270869V1_ALT: {\n\t\t\tname: 'chr20_KI270869v1_alt',\n\t\t\tlen: 118774\n\t\t},\n\t\tCHR21_GL383581V2_ALT: {\n\t\t\tname: 'chr21_GL383581v2_alt',\n\t\t\tlen: 116689\n\t\t},\n\t\tCHR3_KI270781V1_ALT: {\n\t\t\tname: 'chr3_KI270781v1_alt',\n\t\t\tlen: 113034\n\t\t},\n\t\tCHR17_KI270730V1_RANDOM: {\n\t\t\tname: 'chr17_KI270730v1_random',\n\t\t\tlen: 112551\n\t\t},\n\t\tCHRUN_KI270438V1: {\n\t\t\tname: 'chrUn_KI270438v1',\n\t\t\tlen: 112505\n\t\t},\n\t\tCHR4_KI270787V1_ALT: {\n\t\t\tname: 'chr4_KI270787v1_alt',\n\t\t\tlen: 111943\n\t\t},\n\t\tCHR18_KI270864V1_ALT: {\n\t\t\tname: 'chr18_KI270864v1_alt',\n\t\t\tlen: 111737\n\t\t},\n\t\tCHR2_KI270771V1_ALT: {\n\t\t\tname: 'chr2_KI270771v1_alt',\n\t\t\tlen: 110395\n\t\t},\n\t\tCHR1_GL383519V1_ALT: {\n\t\t\tname: 'chr1_GL383519v1_alt',\n\t\t\tlen: 110268\n\t\t},\n\t\tCHR2_KI270768V1_ALT: {\n\t\t\tname: 'chr2_KI270768v1_alt',\n\t\t\tlen: 110099\n\t\t},\n\t\tCHR1_KI270760V1_ALT: {\n\t\t\tname: 'chr1_KI270760v1_alt',\n\t\t\tlen: 109528\n\t\t},\n\t\tCHR3_KI270783V1_ALT: {\n\t\t\tname: 'chr3_KI270783v1_alt',\n\t\t\tlen: 109187\n\t\t},\n\t\tCHR17_KI270859V1_ALT: {\n\t\t\tname: 'chr17_KI270859v1_alt',\n\t\t\tlen: 108763\n\t\t},\n\t\tCHR11_KI270902V1_ALT: {\n\t\t\tname: 'chr11_KI270902v1_alt',\n\t\t\tlen: 106711\n\t\t},\n\t\tCHR18_GL383568V1_ALT: {\n\t\t\tname: 'chr18_GL383568v1_alt',\n\t\t\tlen: 104552\n\t\t},\n\t\tCHR22_KI270737V1_RANDOM: {\n\t\t\tname: 'chr22_KI270737v1_random',\n\t\t\tlen: 103838\n\t\t},\n\t\tCHR13_KI270843V1_ALT: {\n\t\t\tname: 'chr13_KI270843v1_alt',\n\t\t\tlen: 103832\n\t\t},\n\t\tCHR22_KI270877V1_ALT: {\n\t\t\tname: 'chr22_KI270877v1_alt',\n\t\t\tlen: 101331\n\t\t},\n\t\tCHR5_GL383530V1_ALT: {\n\t\t\tname: 'chr5_GL383530v1_alt',\n\t\t\tlen: 101241\n\t\t},\n\t\tCHR11_KI270721V1_RANDOM: {\n\t\t\tname: 'chr11_KI270721v1_random',\n\t\t\tlen: 100316\n\t\t},\n\t\tCHR22_KI270738V1_RANDOM: {\n\t\t\tname: 'chr22_KI270738v1_random',\n\t\t\tlen: 99375\n\t\t},\n\t\tCHR22_GL383583V2_ALT: {\n\t\t\tname: 'chr22_GL383583v2_alt',\n\t\t\tlen: 96924\n\t\t},\n\t\tCHR2_GL582966V2_ALT: {\n\t\t\tname: 'chr2_GL582966v2_alt',\n\t\t\tlen: 96131\n\t\t},\n\t\tCHRUN_KI270748V1: {\n\t\t\tname: 'chrUn_KI270748v1',\n\t\t\tlen: 93321\n\t\t},\n\t\tCHRUN_KI270435V1: {\n\t\t\tname: 'chrUn_KI270435v1',\n\t\t\tlen: 92983\n\t\t},\n\t\tCHR5_GL000208V1_RANDOM: {\n\t\t\tname: 'chr5_GL000208v1_random',\n\t\t\tlen: 92689\n\t\t},\n\t\tCHRUN_KI270538V1: {\n\t\t\tname: 'chrUn_KI270538v1',\n\t\t\tlen: 91309\n\t\t},\n\t\tCHR17_GL383566V1_ALT: {\n\t\t\tname: 'chr17_GL383566v1_alt',\n\t\t\tlen: 90219\n\t\t},\n\t\tCHR16_GL383557V1_ALT: {\n\t\t\tname: 'chr16_GL383557v1_alt',\n\t\t\tlen: 89672\n\t\t},\n\t\tCHR17_JH159148V1_ALT: {\n\t\t\tname: 'chr17_JH159148v1_alt',\n\t\t\tlen: 88070\n\t\t},\n\t\tCHR5_GL383532V1_ALT: {\n\t\t\tname: 'chr5_GL383532v1_alt',\n\t\t\tlen: 82728\n\t\t},\n\t\tCHR21_KI270872V1_ALT: {\n\t\t\tname: 'chr21_KI270872v1_alt',\n\t\t\tlen: 82692\n\t\t},\n\t\tCHRUN_KI270756V1: {\n\t\t\tname: 'chrUn_KI270756v1',\n\t\t\tlen: 79590\n\t\t},\n\t\tCHR6_KI270758V1_ALT: {\n\t\t\tname: 'chr6_KI270758v1_alt',\n\t\t\tlen: 76752\n\t\t},\n\t\tCHR12_KI270833V1_ALT: {\n\t\t\tname: 'chr12_KI270833v1_alt',\n\t\t\tlen: 76061\n\t\t},\n\t\tCHR6_KI270802V1_ALT: {\n\t\t\tname: 'chr6_KI270802v1_alt',\n\t\t\tlen: 75005\n\t\t},\n\t\tCHR21_GL383580V2_ALT: {\n\t\t\tname: 'chr21_GL383580v2_alt',\n\t\t\tlen: 74653\n\t\t},\n\t\tCHR22_KB663609V1_ALT: {\n\t\t\tname: 'chr22_KB663609v1_alt',\n\t\t\tlen: 74013\n\t\t},\n\t\tCHR22_KI270739V1_RANDOM: {\n\t\t\tname: 'chr22_KI270739v1_random',\n\t\t\tlen: 73985\n\t\t},\n\t\tCHR9_GL383540V1_ALT: {\n\t\t\tname: 'chr9_GL383540v1_alt',\n\t\t\tlen: 71551\n\t\t},\n\t\tCHRUN_KI270757V1: {\n\t\t\tname: 'chrUn_KI270757v1',\n\t\t\tlen: 71251\n\t\t},\n\t\tCHR2_KI270773V1_ALT: {\n\t\t\tname: 'chr2_KI270773v1_alt',\n\t\t\tlen: 70887\n\t\t},\n\t\tCHR17_JH159147V1_ALT: {\n\t\t\tname: 'chr17_JH159147v1_alt',\n\t\t\tlen: 70345\n\t\t},\n\t\tCHR11_KI270827V1_ALT: {\n\t\t\tname: 'chr11_KI270827v1_alt',\n\t\t\tlen: 67707\n\t\t},\n\t\tCHR1_KI270709V1_RANDOM: {\n\t\t\tname: 'chr1_KI270709v1_random',\n\t\t\tlen: 66860\n\t\t},\n\t\tCHRUN_KI270746V1: {\n\t\t\tname: 'chrUn_KI270746v1',\n\t\t\tlen: 66486\n\t\t},\n\t\tCHR16_KI270856V1_ALT: {\n\t\t\tname: 'chr16_KI270856v1_alt',\n\t\t\tlen: 63982\n\t\t},\n\t\tCHR21_GL383578V2_ALT: {\n\t\t\tname: 'chr21_GL383578v2_alt',\n\t\t\tlen: 63917\n\t\t},\n\t\tCHRUN_KI270753V1: {\n\t\t\tname: 'chrUn_KI270753v1',\n\t\t\tlen: 62944\n\t\t},\n\t\tCHR19_KI270868V1_ALT: {\n\t\t\tname: 'chr19_KI270868v1_alt',\n\t\t\tlen: 61734\n\t\t},\n\t\tCHR9_GL383542V1_ALT: {\n\t\t\tname: 'chr9_GL383542v1_alt',\n\t\t\tlen: 60032\n\t\t},\n\t\tCHR20_KI270871V1_ALT: {\n\t\t\tname: 'chr20_KI270871v1_alt',\n\t\t\tlen: 58661\n\t\t},\n\t\tCHR12_KI270836V1_ALT: {\n\t\t\tname: 'chr12_KI270836v1_alt',\n\t\t\tlen: 56134\n\t\t},\n\t\tCHR19_KI270865V1_ALT: {\n\t\t\tname: 'chr19_KI270865v1_alt',\n\t\t\tlen: 52969\n\t\t},\n\t\tCHR1_KI270764V1_ALT: {\n\t\t\tname: 'chr1_KI270764v1_alt',\n\t\t\tlen: 50258\n\t\t},\n\t\tCHRUN_KI270589V1: {\n\t\t\tname: 'chrUn_KI270589v1',\n\t\t\tlen: 44474\n\t\t},\n\t\tCHR14_KI270726V1_RANDOM: {\n\t\t\tname: 'chr14_KI270726v1_random',\n\t\t\tlen: 43739\n\t\t},\n\t\tCHR19_KI270866V1_ALT: {\n\t\t\tname: 'chr19_KI270866v1_alt',\n\t\t\tlen: 43156\n\t\t},\n\t\tCHR22_KI270735V1_RANDOM: {\n\t\t\tname: 'chr22_KI270735v1_random',\n\t\t\tlen: 42811\n\t\t},\n\t\tCHR1_KI270711V1_RANDOM: {\n\t\t\tname: 'chr1_KI270711v1_random',\n\t\t\tlen: 42210\n\t\t},\n\t\tCHRUN_KI270745V1: {\n\t\t\tname: 'chrUn_KI270745v1',\n\t\t\tlen: 41891\n\t\t},\n\t\tCHR1_KI270714V1_RANDOM: {\n\t\t\tname: 'chr1_KI270714v1_random',\n\t\t\tlen: 41717\n\t\t},\n\t\tCHR22_KI270732V1_RANDOM: {\n\t\t\tname: 'chr22_KI270732v1_random',\n\t\t\tlen: 41543\n\t\t},\n\t\tCHR1_KI270713V1_RANDOM: {\n\t\t\tname: 'chr1_KI270713v1_random',\n\t\t\tlen: 40745\n\t\t},\n\t\tCHRUN_KI270754V1: {\n\t\t\tname: 'chrUn_KI270754v1',\n\t\t\tlen: 40191\n\t\t},\n\t\tCHR1_KI270710V1_RANDOM: {\n\t\t\tname: 'chr1_KI270710v1_random',\n\t\t\tlen: 40176\n\t\t},\n\t\tCHR12_KI270837V1_ALT: {\n\t\t\tname: 'chr12_KI270837v1_alt',\n\t\t\tlen: 40090\n\t\t},\n\t\tCHR9_KI270717V1_RANDOM: {\n\t\t\tname: 'chr9_KI270717v1_random',\n\t\t\tlen: 40062\n\t\t},\n\t\tCHR14_KI270724V1_RANDOM: {\n\t\t\tname: 'chr14_KI270724v1_random',\n\t\t\tlen: 39555\n\t\t},\n\t\tCHR9_KI270720V1_RANDOM: {\n\t\t\tname: 'chr9_KI270720v1_random',\n\t\t\tlen: 39050\n\t\t},\n\t\tCHR14_KI270723V1_RANDOM: {\n\t\t\tname: 'chr14_KI270723v1_random',\n\t\t\tlen: 38115\n\t\t},\n\t\tCHR9_KI270718V1_RANDOM: {\n\t\t\tname: 'chr9_KI270718v1_random',\n\t\t\tlen: 38054\n\t\t},\n\t\tCHRUN_KI270317V1: {\n\t\t\tname: 'chrUn_KI270317v1',\n\t\t\tlen: 37690\n\t\t},\n\t\tCHR13_KI270842V1_ALT: {\n\t\t\tname: 'chr13_KI270842v1_alt',\n\t\t\tlen: 37287\n\t\t},\n\t\tCHRY_KI270740V1_RANDOM: {\n\t\t\tname: 'chrY_KI270740v1_random',\n\t\t\tlen: 37240\n\t\t},\n\t\tCHRUN_KI270755V1: {\n\t\t\tname: 'chrUn_KI270755v1',\n\t\t\tlen: 36723\n\t\t},\n\t\tCHR8_KI270820V1_ALT: {\n\t\t\tname: 'chr8_KI270820v1_alt',\n\t\t\tlen: 36640\n\t\t},\n\t\tCHR1_KI270707V1_RANDOM: {\n\t\t\tname: 'chr1_KI270707v1_random',\n\t\t\tlen: 32032\n\t\t},\n\t\tCHRUN_KI270579V1: {\n\t\t\tname: 'chrUn_KI270579v1',\n\t\t\tlen: 31033\n\t\t},\n\t\tCHRUN_KI270752V1: {\n\t\t\tname: 'chrUn_KI270752v1',\n\t\t\tlen: 27745\n\t\t},\n\t\tCHRUN_KI270512V1: {\n\t\t\tname: 'chrUn_KI270512v1',\n\t\t\tlen: 22689\n\t\t},\n\t\tCHRUN_KI270322V1: {\n\t\t\tname: 'chrUn_KI270322v1',\n\t\t\tlen: 21476\n\t\t},\n\t\tCHRUN_GL000226V1: {\n\t\t\tname: 'chrUn_GL000226v1',\n\t\t\tlen: 15008\n\t\t},\n\t\tCHRUN_KI270311V1: {\n\t\t\tname: 'chrUn_KI270311v1',\n\t\t\tlen: 12399\n\t\t},\n\t\tCHRUN_KI270366V1: {\n\t\t\tname: 'chrUn_KI270366v1',\n\t\t\tlen: 8320\n\t\t},\n\t\tCHRUN_KI270511V1: {\n\t\t\tname: 'chrUn_KI270511v1',\n\t\t\tlen: 8127\n\t\t},\n\t\tCHRUN_KI270448V1: {\n\t\t\tname: 'chrUn_KI270448v1',\n\t\t\tlen: 7992\n\t\t},\n\t\tCHRUN_KI270521V1: {\n\t\t\tname: 'chrUn_KI270521v1',\n\t\t\tlen: 7642\n\t\t},\n\t\tCHRUN_KI270581V1: {\n\t\t\tname: 'chrUn_KI270581v1',\n\t\t\tlen: 7046\n\t\t},\n\t\tCHRUN_KI270582V1: {\n\t\t\tname: 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6
- "names": []
7
- }
package/dist/chunk-AG2PISH4.js DELETED
@@ -1,257 +0,0 @@
1
- import {
2
- make_table_2col
3
- } from "./chunk-4ASBDE27.js";
4
-
5
- // src/block.mds.expressionstat.js
6
- var color_noinfo = "#858585";
7
- function init_config(cfg) {
8
- if (!cfg.datatype) cfg.datatype = "FPKM";
9
- if (!cfg.itemcolor) cfg.itemcolor = "green";
10
- if (!cfg.ase) cfg.ase = {};
11
- if (cfg.ase.qvalue == void 0) cfg.ase.qvalue = 0.05;
12
- if (cfg.ase.meandelta_monoallelic == void 0) cfg.ase.meandelta_monoallelic = 0.3;
13
- if (cfg.ase.asemarkernumber_biallelic == void 0) cfg.ase.asemarkernumber_biallelic = 0;
14
- if (!cfg.ase.color_noinfo) cfg.ase.color_noinfo = color_noinfo;
15
- if (!cfg.ase.color_uncertain) cfg.ase.color_uncertain = "#A8E0B5";
16
- if (!cfg.ase.color_biallelic) cfg.ase.color_biallelic = "#40859C";
17
- if (!cfg.ase.color_monoallelic) cfg.ase.color_monoallelic = "#d95f02";
18
- if (!cfg.outlier) cfg.outlier = {};
19
- if (cfg.outlier.pvalue_cutoff == void 0) cfg.outlier.pvalue_cutoff = 0.05;
20
- if (cfg.outlier.rank_asehigh_cutoff == void 0) cfg.outlier.rank_asehigh_cutoff = 0.1;
21
- if (!cfg.outlier.color_outlier) cfg.outlier.color_outlier = "#FF8875";
22
- if (!cfg.outlier.color_outlier_asehigh) cfg.outlier.color_outlier_asehigh = "blue";
23
- }
24
- function measure(v, cfg) {
25
- if (!cfg) return;
26
- v.estat = {};
27
- if (v.ase && cfg.ase) {
28
- const qvalue = v.ase.qvalue || v.ase.geometricmean;
29
- if (qvalue == void 0) {
30
- v.estat.ase_noinfo = true;
31
- } else if (qvalue <= cfg.ase.qvalue) {
32
- if (v.ase.mean_delta >= cfg.ase.meandelta_monoallelic) {
33
- v.estat.ase_monoallelic = true;
34
- } else {
35
- v.estat.ase_uncertain = true;
36
- }
37
- } else {
38
- if (v.ase.ase_markers == cfg.ase.asemarkernumber_biallelic) {
39
- v.estat.ase_biallelic = true;
40
- } else {
41
- v.estat.ase_uncertain = true;
42
- }
43
- }
44
- } else {
45
- v.estat.ase_noinfo = true;
46
- }
47
- if (v.outlier && cfg.outlier) {
48
- if (v.outlier.test_whitelist) {
49
- if (v.outlier.test_whitelist.pvalue <= cfg.outlier.pvalue_cutoff) {
50
- v.estat.outlier = true;
51
- } else {
52
- if (v.estat.ase_monoallelic) {
53
- if (Number.isInteger(v.outlier.test_whitelist.rank) && Number.isInteger(v.outlier.test_whitelist.size) && v.outlier.test_whitelist.rank / v.outlier.test_whitelist.size <= cfg.outlier.rank_asehigh_cutoff) {
54
- v.estat.outlier_asehigh = true;
55
- v.outlier.test_whitelist.asehigh = true;
56
- }
57
- }
58
- }
59
- } else if (v.outlier.test_biallelic) {
60
- if (v.outlier.test_biallelic.pvalue <= cfg.outlier.pvalue_cutoff) {
61
- v.estat.outlier = true;
62
- } else {
63
- if (v.estat.ase_monoallelic) {
64
- if (Number.isInteger(v.outlier.test_biallelic.rank) && Number.isInteger(v.outlier.test_biallelic.size) && v.outlier.test_biallelic.rank / v.outlier.test_biallelic.size <= cfg.outlier.rank_asehigh_cutoff) {
65
- v.estat.outlier_asehigh = true;
66
- v.outlier.test_biallelic.asehigh = true;
67
- }
68
- }
69
- }
70
- } else if (v.outlier.test_entirecohort) {
71
- if (v.outlier.test_entirecohort.pvalue <= cfg.outlier.pvalue_cutoff) {
72
- v.estat.outlier = true;
73
- } else {
74
- if (v.estat.ase_monoallelic) {
75
- if (Number.isInteger(v.outlier.test_entirecohort.rank) && Number.isInteger(v.outlier.test_entirecohort.size) && v.outlier.test_entirecohort.rank / v.outlier.test_entirecohort.size <= cfg.outlier.rank_asehigh_cutoff) {
76
- v.estat.outlier_asehigh = true;
77
- v.outlier.test_entirecohort.asehigh = true;
78
- }
79
- }
80
- }
81
- }
82
- }
83
- }
84
- function showsingleitem_table(v, cfg, table) {
85
- if (!v.estat) return;
86
- if (cfg.no_ase) return;
87
- if (v.ase) {
88
- const tr = table.append("tr");
89
- tr.append("td").attr("colspan", 2).style("background", ase_color(v, cfg)).style("color", "white").html(
90
- (v.estat.ase_monoallelic ? "Mono-allelic" : v.estat.ase_biallelic ? "Bi-allelic" : "ASE uncertain") + "<br>(allele-specific expression)"
91
- );
92
- const lst = [
93
- {
94
- k: "#SNPs heterozygous in DNA",
95
- v: v.ase.markers
96
- },
97
- {
98
- k: "#SNPs showing ASE in RNA",
99
- v: v.ase.ase_markers
100
- },
101
- {
102
- k: "Mean delta of ASE SNPs",
103
- v: v.ase.mean_delta
104
- }
105
- ];
106
- if (v.ase.qvalue) {
107
- lst.push({
108
- k: "Q-value",
109
- v: v.ase.qvalue
110
- });
111
- } else if (v.ase.geometricmean) {
112
- lst.push({
113
- k: "Geometric mean of binomial P-values of ASE SNPs",
114
- v: v.ase.geometricmean
115
- });
116
- }
117
- const td = tr.append("td");
118
- make_table_2col(td, lst);
119
- } else {
120
- const tr = table.append("tr");
121
- tr.append("td").attr("colspan", 3).style("background", cfg.ase.color_noinfo).style("color", "white").text("No info on allele-specific expression");
122
- }
123
- if (v.outlier) {
124
- if (v.outlier.test_whitelist) {
125
- const tr = table.append("tr");
126
- tr.append("td").attr("colspan", 2).text("Outlier (white list)");
127
- const lst = [];
128
- for (const k in v.outlier.test_whitelist) {
129
- lst.push({ k, v: v.outlier.test_whitelist[k] });
130
- }
131
- const td = tr.append("td");
132
- make_table_2col(td, lst);
133
- if (v.outlier.test_whitelist.asehigh) {
134
- td.append("div").style("background", cfg.outlier.color_outlier_asehigh).style("padding", "2px 10px").style("color", "white").text("ASE high");
135
- }
136
- }
137
- if (v.outlier.test_biallelic) {
138
- const tr = table.append("tr");
139
- tr.append("td").attr("colspan", 2).text("Outlier (biallelic)");
140
- const lst = [];
141
- for (const k in v.outlier.test_biallelic) {
142
- lst.push({ k, v: v.outlier.test_biallelic[k] });
143
- }
144
- const td = tr.append("td");
145
- make_table_2col(td, lst);
146
- if (v.outlier.test_biallelic.asehigh) {
147
- td.append("div").style("background", cfg.outlier.color_outlier_asehigh).style("padding", "2px 10px").style("color", "white").text("ASE high");
148
- }
149
- }
150
- if (v.outlier.test_entirecohort) {
151
- const tr = table.append("tr");
152
- tr.append("td").attr("colspan", 2).text("Outlier (all samples)");
153
- const lst = [];
154
- for (const k in v.outlier.test_entirecohort) {
155
- lst.push({ k, v: v.outlier.test_entirecohort[k] });
156
- }
157
- const td = tr.append("td");
158
- make_table_2col(td, lst);
159
- if (v.outlier.test_entirecohort.asehigh) {
160
- td.append("div").style("background", cfg.outlier.color_outlier_asehigh).style("padding", "2px 10px").style("color", "white").text("ASE high");
161
- }
162
- }
163
- }
164
- }
165
- function ase_color(v, cfg) {
166
- if (cfg.no_ase) return color_noinfo;
167
- if (!cfg.ase) return color_noinfo;
168
- if (!v.estat) return cfg.ase.color_noinfo;
169
- if (v.estat.ase_monoallelic) return cfg.ase.color_monoallelic;
170
- if (v.estat.ase_biallelic) return cfg.ase.color_biallelic;
171
- if (v.estat.ase_uncertain) return cfg.ase.color_uncertain;
172
- return cfg.ase.color_noinfo;
173
- }
174
- function ui_config(holder, cfg, tk, call) {
175
- const indent = 30;
176
- {
177
- const row = holder.append("div").style("margin-bottom", "5px");
178
- row.append("span").html("If Q-VALUE &le;&nbsp;");
179
- row.append("input").attr("type", "number").style("width", "50px").property("value", cfg.ase.qvalue).on("keyup", (event) => {
180
- if (event.code != "Enter" && event.code != "NumpadEnter") return;
181
- let v = Number.parseFloat(event.target.value);
182
- if (!v || v <= 0) {
183
- return;
184
- }
185
- if (cfg.ase.qvalue == v) {
186
- return;
187
- }
188
- cfg.ase.qvalue = v;
189
- call();
190
- });
191
- row.append("span").html("&nbsp;:");
192
- }
193
- {
194
- const row = holder.append("div").style("margin", "0px 5px 5px " + indent + "px");
195
- row.append("span").html("If MEAN_DELTA &ge;&nbsp;");
196
- row.append("input").attr("type", "number").style("width", "50px").property("value", cfg.ase.meandelta_monoallelic).on("keyup", (event) => {
197
- if (event.code != "Enter" && event.code != "NumpadEnter") return;
198
- let v = Number.parseFloat(event.target.value);
199
- if (!v || v <= 0) {
200
- return;
201
- }
202
- if (cfg.ase.meandelta_monoallelic == v) {
203
- return;
204
- }
205
- cfg.ase.meandelta_monoallelic = v;
206
- call();
207
- });
208
- row.append("span").html("&nbsp;:&nbsp;");
209
- }
210
- holder.append("div").style("margin", "0px 5px 5px " + indent * 2 + "px").html(
211
- 'Is <span style="background:' + cfg.ase.color_monoallelic + ';padding:1px 5px;color:white;">mono-allelic expression</span>'
212
- );
213
- holder.append("div").style("margin", "0px 5px 5px " + indent + "px").html("Else:");
214
- holder.append("div").style("margin", "0px 5px 5px " + indent * 2 + "px").html(
215
- 'Is <span style="background:' + cfg.ase.color_uncertain + ';padding:1px 5px;color:white;">ASE uncertain</span>'
216
- );
217
- holder.append("div").style("margin", "0px 5px 5px 0px").html("Else:");
218
- {
219
- const row = holder.append("div").style("margin", "0px 5px 5px " + indent + "px");
220
- row.append("span").html("If number of ASE markers &le;&nbsp;");
221
- row.append("input").attr("type", "number").style("width", "50px").property("value", cfg.ase.asemarkernumber_biallelic).on("keyup", (event) => {
222
- if (event.code != "Enter" && event.code != "NumpadEnter") return;
223
- let v = Number.parseInt(event.target.value);
224
- if (v < 0) {
225
- return;
226
- }
227
- if (cfg.ase.asemarkernumber_biallelic == v) {
228
- return;
229
- }
230
- cfg.ase.asemarkernumber_biallelic = v;
231
- call();
232
- });
233
- row.append("span").html("&nbsp;:&nbsp;");
234
- }
235
- holder.append("div").style("margin", "0px 5px 5px " + indent * 2 + "px").html(
236
- 'Is <span style="background:' + cfg.ase.color_biallelic + ';padding:1px 5px;color:white;">bi-allelic expression</span>'
237
- );
238
- holder.append("div").style("margin", "0px 5px 5px " + indent + "px").html("Else:");
239
- holder.append("div").style("margin", "0px 5px 5px " + indent * 2 + "px").html(
240
- 'Is <span style="background:' + cfg.ase.color_uncertain + ';padding:1px 5px;color:white;">ASE uncertain</span>'
241
- );
242
- holder.append("div").style("margin", "10px").append("button").text("Default ASE parameters").on("click", () => {
243
- cfg.ase.qvalue = 0.05;
244
- cfg.ase.meandelta_monoallelic = 0.3;
245
- cfg.ase.asemarkernumber_biallelic = 0;
246
- call();
247
- });
248
- }
249
-
250
- export {
251
- init_config,
252
- measure,
253
- showsingleitem_table,
254
- ase_color,
255
- ui_config
256
- };
257
- //# sourceMappingURL=chunk-AG2PISH4.js.map