@sjcrh/proteinpaint-client 2.208.0 → 2.210.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/2dmaf-43QBND66.js +1367 -0
- package/dist/AggMatrixInput-X7NGFUHH.js +406 -0
- package/dist/AggregateMatrix-M4HRI4PX.js +41 -0
- package/dist/AppHeader-QBRQN6PM.js +830 -0
- package/dist/BoxPlot-V6SPSEQ2.js +1211 -0
- package/dist/CorrelationVolcano-UFPCYC77.js +617 -0
- package/dist/Cuminc-KXGXGLKZ.js +1219 -0
- package/dist/DE-K2YXHOOW.js +89 -0
- package/dist/DEinput-O6LBFAAH.js +501 -0
- package/dist/DEinput-O6LBFAAH.js.map +7 -0
- package/dist/DM-C7VN3RWB.js +90 -0
- package/dist/DifferentialAnalysis-A2BU4WB3.js +239 -0
- package/dist/DifferentialAnalysis-A2BU4WB3.js.map +7 -0
- package/dist/Disco-HECQVKXG.js +3389 -0
- package/dist/Disco.UI-XF2GEKRW.js +243 -0
- package/dist/DmrPlot-TVXVXOHL.js +362 -0
- package/dist/DmrPlot-TVXVXOHL.js.map +7 -0
- package/dist/GB-66ZGJ5ST.js +1428 -0
- package/dist/GB-66ZGJ5ST.js.map +7 -0
- package/dist/GSEA-Z4YPI4HY.js +875 -0
- package/dist/GSEA-Z4YPI4HY.js.map +7 -0
- package/dist/GeneExpInput-VBIZZV27.js +42 -0
- package/dist/Geomap-UIIOLRFA.js +84 -0
- package/dist/HicApp-73ESVNBA.js +2245 -0
- package/dist/IDCViewer-RBYN5A4P.js +10812 -0
- package/dist/NumBinaryEditor-DJLSNSLE.js +279 -0
- package/dist/NumBinaryEditor.unit.spec-LCJHL3XM.js +312 -0
- package/dist/NumContEditor-SVLDJ2ML.js +105 -0
- package/dist/NumContEditor.unit.spec-JDMSK4HY.js +164 -0
- package/dist/NumCustomBinEditor-BI63AH3R.js +33 -0
- package/dist/NumCustomBinEditor.unit.spec-5433G7Y2.js +397 -0
- package/dist/NumDiscreteEditor-LEZTGXAV.js +170 -0
- package/dist/NumDiscreteEditor.unit.spec-5OEORHJ4.js +233 -0
- package/dist/NumRegularBinEditor-EXWHIWPM.js +33 -0
- package/dist/NumRegularBinEditor.unit.spec-QY25Z2TT.js +278 -0
- package/dist/NumSplineEditor-XPPMYYAD.js +210 -0
- package/dist/NumSplineEditor.unit.spec-GOGBKWMN.js +224 -0
- package/dist/NumericDensity-RKY2IQ72.js +33 -0
- package/dist/NumericDensity.unit.spec-5ZM6ICXM.js +418 -0
- package/dist/NumericHandler-FXF3M5M3.js +34 -0
- package/dist/NumericHandler.unit.spec-M2OQTBJX.js +214 -0
- package/dist/ProteomeInput-TMZ3THRL.js +388 -0
- package/dist/Regression-GQGAATHG.js +1416 -0
- package/dist/Regression-GQGAATHG.js.map +7 -0
- package/dist/RunChart2-7GNDWRKC.js +749 -0
- package/dist/SC-R2I2EMHA.js +1183 -0
- package/dist/SC-R2I2EMHA.js.map +7 -0
- package/dist/Violin-GKKEB55L.js +1081 -0
- package/dist/Violin-GKKEB55L.js.map +7 -0
- package/dist/Volcano-HRG5EFWH.js +2443 -0
- package/dist/Volcano-HRG5EFWH.js.map +7 -0
- package/dist/Wsi-OHRCGYYD.js +629 -0
- package/dist/adSandbox-H56B25WR.js +33 -0
- package/dist/animatedBubbleChart-7SXFHU4J.js +547 -0
- package/dist/app-22JCSULA.js +42 -0
- package/dist/app-RGZJB6LN.js +32 -0
- package/dist/app.js +14 -14
- package/dist/bam-HA65TRGX.js +876 -0
- package/dist/barchart-6XO75OMA.js +42 -0
- package/dist/barchart2-6E5BIRHD.js +309 -0
- package/dist/block-43KNTXZ5.js +6250 -0
- package/dist/block-43KNTXZ5.js.map +7 -0
- package/dist/block.init-TPU5QIPA.js +33 -0
- package/dist/block.mds.expressionrank-QZDRFXCH.js +354 -0
- package/dist/block.mds.geneboxplot-64QVBK5Q.js +823 -0
- package/dist/block.mds.junction-I4J6VXNT.js +1539 -0
- package/dist/block.mds.svcnv-GDQMSQFF.js +6796 -0
- package/dist/block.svg-2MZFT5QP.js +159 -0
- package/dist/block.tk.aicheck-2MKHF6LX.js +278 -0
- package/dist/block.tk.ase-CLYGKFTS.js +360 -0
- package/dist/block.tk.bam-XTR4QA5Z.js +1901 -0
- package/dist/block.tk.bedgraphdot-A2P2CXRU.js +379 -0
- package/dist/block.tk.bigwig.ui-YZH6JXEO.js +206 -0
- package/dist/block.tk.hicstraw-QBK5VWGU.js +818 -0
- package/dist/block.tk.junction-5DEVBA7G.js +2358 -0
- package/dist/block.tk.junction.textmatrixui-7TTQMO6W.js +194 -0
- package/dist/block.tk.ld-PRIVUPKL.js +94 -0
- package/dist/block.tk.menu-JGBRFSS3.js +1024 -0
- package/dist/block.tk.pgv-KQJCJMVD.js +938 -0
- package/dist/brainImaging-4SLVJ2HV.js +555 -0
- package/dist/brainRegions-BDIVM2SG.js +217 -0
- package/dist/bubbleHeatmap-ORKFJNEQ.js +378 -0
- package/dist/cellTypeBubbleHeatmap-VOHLI4P7.js +278 -0
- package/dist/chunk-26N3B2JO.js +194 -0
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- package/dist/chunk-EDZJ3VNZ.js +54 -0
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- package/dist/chunk-FSLOUTTK.js.map +7 -0
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- package/dist/chunk-IAB2PRIH.js.map +7 -0
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- package/dist/chunk-IJ7AIDEO.js +302 -0
- package/dist/chunk-JBFVJHZN.js +1233 -0
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- package/dist/chunk-KIAMLQ7S.js.map +7 -0
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- package/dist/chunk-VA57CUC7.js.map +7 -0
- package/dist/chunk-VH5W6ODW.js +294 -0
- package/dist/chunk-VROF55EH.js +255 -0
- package/dist/chunk-VROF55EH.js.map +7 -0
- package/dist/chunk-VWA7BYSV.js +217 -0
- package/dist/chunk-X37BRSGS.js +102 -0
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- package/dist/chunk-XXPUZVS4.js +237 -0
- package/dist/chunk-XXPUZVS4.js.map +7 -0
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- package/dist/chunk-ZZN7ZD7J.js +54 -0
- package/dist/cohort-6OCRQQ2S.js +70 -0
- package/dist/condition-SZVXH3VU.js +327 -0
- package/dist/controls-MO6ZND76.js +34 -0
- package/dist/controls.config-P4MSTGL4.js +34 -0
- package/dist/correlation-NMI3CM3T.js +95 -0
- package/dist/customdata.inputui-VCHSCA65.js +284 -0
- package/dist/dataDownload-VQHOTQ5D.js +329 -0
- package/dist/databrowser.ui-ZFOCAG32.js +425 -0
- package/dist/dictionary-S5YCFUWH.js +113 -0
- package/dist/dnaMethylation-MQZLZRGT.js +33 -0
- package/dist/dnaMethylation.integration.spec-H546EBUO.js +198 -0
- package/dist/dofetch-QZIYSC7H.js +48 -0
- package/dist/e2pca-XOXOS3PN.js +344 -0
- package/dist/ep-U6KRL7FR.js +1249 -0
- package/dist/expclust.gdc.spec-HCK65C63.js +302 -0
- package/dist/facet-DCC25KJO.js +519 -0
- package/dist/gb-TIFWFD4Y.js +81 -0
- package/dist/geneExpClustering-6DQEOTOY.js +244 -0
- package/dist/geneExpression-EASRAN6B.js +310 -0
- package/dist/geneExpression-G4YMDCBH.js +33 -0
- package/dist/geneExpression.unit.spec-XVEJYMPX.js +128 -0
- package/dist/geneExpression.unit.spec-XVEJYMPX.js.map +7 -0
- package/dist/geneORA-6UBS5GSC.js +273 -0
- package/dist/geneRanking-UXXYWHNB.js +548 -0
- package/dist/geneVariant-SZRJOXVC.js +289 -0
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- package/dist/genefusion.ui-TJLYXSVL.js +303 -0
- package/dist/geneset-YTBDLEIH.js +203 -0
- package/dist/genomeBrowser.spec-ZO4LFIXE.js +276 -0
- package/dist/grin2-FC4VYU54.js +949 -0
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- package/dist/hierCluster-56EGAPOR.js +59 -0
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- package/dist/profileForms-GD7BIOOD.js +941 -0
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import {
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make_one_checkbox
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get_bin_range_equation
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toStoredUnit,
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toUserUnit
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// termsetting/handlers/NumBinaryEditor.ts
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var NumBinaryEditor = class extends HandlerBase {
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constructor(opts, handler) {
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super(opts);
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/* the cutoff is stored in the term's own unit but entered and shown in its user-facing one.
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toDisplay(v) {
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toStored(v) {
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async showEditMenu(div) {
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this.dom.density_div = div.append("div");
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await this.handler.density.showViolin(this.dom.density_div);
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await this.handler.density.setBinLines(this.getBoundaryOpts());
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this.dom.boundaryInclusionDiv = div.append("div").style("padding", "5px");
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getDefaultQ() {
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const { min, max } = this.handler.density_data;
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const defaultCustomBoundary = (
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minvalue and maxvalue are both null
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setting defaultCustomBoundary to arbitrary "0" will allow existing UI to work
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*/
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const firstBin = {
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const lastBin = {
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};
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return {
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mode: "binary",
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type: "custom-bin",
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lst: [
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{
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...firstBin,
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label: get_bin_label(firstBin, this.tw.q, this.tw.term.valueConversion),
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range: get_bin_range_equation(firstBin, this.tw.q, this.tw.term.valueConversion)
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},
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{
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...lastBin,
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label: get_bin_label(lastBin, this.tw.q, this.tw.term.valueConversion),
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range: get_bin_range_equation(lastBin, this.tw.q, this.tw.term.valueConversion)
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}
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//satisfies StopUnboundedBin
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],
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cutoffType: "normal"
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};
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}
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getBoundaryOpts() {
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return {
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values: [
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{
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//this.q.lst[0].map(bin => ({ x: bin.startunbounded ? bin.stop : bin.start, isDraggable: true })),
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isDraggable: true
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}
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],
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// the dragged value arrives in display units, matching what the cutoff <input> shows
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callback: (d, value) => {
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this.q.lst[0].stop = this.toStored(value);
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this.q.lst[1].start = this.toStored(value);
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this.dom.cutoffInput.property("value", value);
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this.q.lst = this.processBinaryBinInputs();
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this.dom.customBinRanges.data(this.q.lst).html((d2) => d2.range);
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this.dom.customBinLabelInput.data(this.q.lst).property("value", (d2) => d2.label);
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}
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};
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}
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getBoundaryInclusion() {
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return this.q.lst[0].startinclusive ? "startinclusive" : "stopinclusive";
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}
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renderBoundaryInclusionSelect() {
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this.dom.boundaryInclusionDiv.selectAll("*").remove();
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this.dom.boundaryInclusionDiv.append("span").style("padding", "5px").style("color", "rgb(136, 136, 136)").html("Boundary Inclusion");
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const x = '<span style="font-family:Times;font-style:italic">x</span>';
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this.dom.boundaryInclusionSelect = this.dom.boundaryInclusionDiv.append("select").style("margin-left", "10px").on("change", () => {
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this.renderBoundaryInputDivs();
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});
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this.dom.boundaryInclusionSelect.selectAll("option").data([
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{ value: "stopinclusive", html: `start < ${x} ≤ end` },
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{ value: "startinclusive", html: `start ≤ ${x} < end` }
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]).enter().append("option").property("value", (d) => d.value).property("selected", (d) => this.tw.q.lst?.[0]?.[d.value] == true).html((d) => d.html);
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}
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async renderCutoffInput() {
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this.dom.cutoff_div.append("span").style("margin-right", "5px").style("opacity", 0.5).text("Boundary value");
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const q = this.q;
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this.dom.cutoffInput = this.dom.cutoff_div.append("input").style("width", "100px").attr("type", "number").style("margin-right", "10px").attr("value", this.toDisplay(q.lst[0].stop)).on("change", () => this.renderBoundaryInputDivs());
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this.dom.cutoffPercentileCheckbox = make_one_checkbox({
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holder: this.dom.cutoff_div,
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labeltext: "Use percentile",
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checked: false,
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divstyle: { display: "inline-block" },
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callback: async (checked) => {
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this.dom.cutoffInput.property("disabled", checked == true);
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this.dom.cutoffInputPercentile.style("display", checked ? "" : "none");
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this.handlePercentileChange();
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}
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});
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this.dom.cutoffInputPercentile = this.dom.cutoff_div.append("input").attr("type", "number").attr("value", this.cutoffPercentile).style("display", "none").style("width", "100px").style("margin-right", "10px").on("change", () => this.handlePercentileChange());
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}
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async handlePercentileChange() {
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try {
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const cutoffPercentile = Number(this.dom.cutoffInputPercentile.property("value"));
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this.q.cutoffPercentile = cutoffPercentile;
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const data = await this.termsetting.vocabApi.getPercentile(
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this.tw.term,
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[cutoffPercentile],
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this.termsetting.vocabApi.state?.termfilter
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);
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this.dom.cutoffInput.property("value", this.toDisplay(data.values[0]));
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this.renderBoundaryInputDivs();
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} catch (e) {
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|
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console.error(e);
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}
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|
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}
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renderBoundaryInputDivs() {
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const cutoff = this.toStored(this.dom.cutoffInput.property("value"));
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this.q.lst[0].stop = cutoff;
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this.q.lst[1].start = cutoff;
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this.q.lst = this.processBinaryBinInputs();
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const data = this.q.lst;
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const holder = this.dom.inputsDiv;
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|
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holder.selectAll("*").remove();
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|
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const grid = holder.append("div").style("display", "grid").style("grid-template-columns", "auto auto").style("column-gap", "20px").style("align-items", "center");
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|
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grid.append("div").style("margin-bottom", "3px").style("color", "rgb(136, 136, 136)").text("Range");
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grid.append("div").style("margin-bottom", "3px").style("color", "rgb(136, 136, 136)").text("Bin label");
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for (const d of data) {
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grid.append("div").datum(d).attr("name", "range").html(d.range);
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|
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grid.append("div").append("input").datum(d).attr("type", "text").style("margin", "2px 0px").property("value", d.label).on("change", function() {
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d.label = this.value;
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|
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});
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}
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this.dom.customBinRanges = this.dom.inputsDiv.selectAll('div[name="range"]');
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|
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this.dom.customBinLabelInput = this.dom.inputsDiv.selectAll("input");
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|
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this.handler.density.setBinLines(this.getBoundaryOpts());
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}
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processBinaryBinInputs() {
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const inclusive = this.dom.boundaryInclusionSelect.property("value");
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const startinclusive = inclusive == "startinclusive";
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const stopinclusive = inclusive == "stopinclusive";
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const val = this.q.lst[0].stop;
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if (!val && val !== 0) throw "val is undefined";
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const firstBin = {
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startunbounded: true,
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stop: Number(val),
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startinclusive: false,
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stopinclusive
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};
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const lastBin = {
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start: Number(val),
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startinclusive,
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stopunbounded: true
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};
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const bins = [
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{
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...firstBin,
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label: get_bin_label(firstBin, this.q, this.tw.term.valueConversion),
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range: get_bin_range_equation(firstBin, this.tw.q, this.tw.term.valueConversion)
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},
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{
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...lastBin,
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label: get_bin_label(lastBin, this.q, this.tw.term.valueConversion),
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range: get_bin_range_equation(lastBin, this.tw.q, this.tw.term.valueConversion)
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}
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|
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];
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return bins;
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|
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}
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getEditedQ(destroyDom = true) {
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const lst = this.processBinaryBinInputs();
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if (destroyDom) {
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for (const name of Object.keys(this.dom)) {
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this.dom[name].remove();
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delete this.dom[name];
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}
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}
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return {
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mode: "binary",
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type: "custom-bin",
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lst
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};
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}
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|
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async undoEdits() {
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|
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this.q = this.getDefaultQ();
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|
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await this.handler.density.setBinLines(this.getBoundaryOpts());
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|
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this.dom.inputsDiv.selectAll("*").remove();
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|
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this.renderBoundaryInclusionSelect();
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|
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this.renderCutoffInput();
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|
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this.renderBoundaryInputDivs();
|
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|
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}
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|
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};
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|
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export {
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NumBinaryEditor
|
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|
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};
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|
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//# sourceMappingURL=NumBinaryEditor-NEL727DX.js.map
|
|
@@ -1,312 +0,0 @@
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import {
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|
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agedx
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|
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} from "./chunk-32AI7I4C.js";
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import {
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NumericHandler
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} from "./chunk-4C7MA5Q3.js";
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import "./chunk-F4DM3WS4.js";
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import {
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termjson
|
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|
-
} from "./chunk-FQYXNCZI.js";
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import {
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sleep
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} from "./chunk-FYXIK6Y6.js";
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import {
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require_tape
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} from "./chunk-PJYCTAMC.js";
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import {
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TwRouter
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} from "./chunk-QJ3HYZH3.js";
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|
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import "./chunk-TLT4YIG3.js";
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|
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import "./chunk-5R63Q5KH.js";
|
|
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|
-
import {
|
|
42
|
-
select_default
|
|
43
|
-
} from "./chunk-I6Y4O3RR.js";
|
|
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|
-
import "./chunk-Q5RDQNIT.js";
|
|
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|
-
import "./chunk-DQC5FFGV.js";
|
|
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|
-
import {
|
|
47
|
-
__toESM
|
|
48
|
-
} from "./chunk-HS5PO5ZQ.js";
|
|
49
|
-
|
|
50
|
-
// termsetting/handlers/test/NumBinaryEditor.unit.spec.ts
|
|
51
|
-
var import_tape = __toESM(require_tape(), 1);
|
|
52
|
-
var pct50 = 6.3475409836;
|
|
53
|
-
var pct70 = 1000.36986301355;
|
|
54
|
-
var DAY_TO_YEAR = 1 / 365.25;
|
|
55
|
-
function getConvertedTerm() {
|
|
56
|
-
const term = JSON.parse(JSON.stringify(termjson.agedx));
|
|
57
|
-
term.valueConversion = { fromUnit: "day", toUnit: "year", scaleFactor: DAY_TO_YEAR };
|
|
58
|
-
return term;
|
|
59
|
-
}
|
|
60
|
-
async function getNumericHandler(opts = {}) {
|
|
61
|
-
const term = opts.term || JSON.parse(JSON.stringify(termjson.agedx));
|
|
62
|
-
const rawTw = {
|
|
63
|
-
term,
|
|
64
|
-
q: {
|
|
65
|
-
mode: "binary"
|
|
66
|
-
}
|
|
67
|
-
};
|
|
68
|
-
let handler = {};
|
|
69
|
-
const vocabApi = {
|
|
70
|
-
state: {
|
|
71
|
-
termfilter: { filter: { type: "tvslst", in: "", lst: [] } }
|
|
72
|
-
},
|
|
73
|
-
getViolinBox() {
|
|
74
|
-
return agedx;
|
|
75
|
-
},
|
|
76
|
-
getPercentile() {
|
|
77
|
-
return {
|
|
78
|
-
values: handler?.editHandler?.q.cutoffPercentile === 70 ? [pct70] : [pct50]
|
|
79
|
-
};
|
|
80
|
-
}
|
|
81
|
-
};
|
|
82
|
-
const tw = await TwRouter.initRaw(rawTw, { vocabApi });
|
|
83
|
-
handler = new NumericHandler({
|
|
84
|
-
termsetting: {
|
|
85
|
-
tw,
|
|
86
|
-
term: rawTw.term,
|
|
87
|
-
q: rawTw.q,
|
|
88
|
-
opts: {
|
|
89
|
-
numericEditMenuVersion: ["binary"],
|
|
90
|
-
usecase: opts.usecase
|
|
91
|
-
},
|
|
92
|
-
api: {
|
|
93
|
-
runCallback() {
|
|
94
|
-
}
|
|
95
|
-
},
|
|
96
|
-
dom: {
|
|
97
|
-
tip: {
|
|
98
|
-
hide() {
|
|
99
|
-
}
|
|
100
|
-
}
|
|
101
|
-
},
|
|
102
|
-
vocabApi
|
|
103
|
-
}
|
|
104
|
-
});
|
|
105
|
-
handler.density_data = { min: 0, max: 100 };
|
|
106
|
-
const holder = select_default("body").append("div").style("position", "relative").style("width", "fit-content").style("margin", "20px").style("padding", "5px").style("border", "1px solid #000");
|
|
107
|
-
handler.dom.editDiv = holder;
|
|
108
|
-
await handler.setEditHandler(handler.tabs[0]);
|
|
109
|
-
return {
|
|
110
|
-
rawTw,
|
|
111
|
-
tw,
|
|
112
|
-
handler,
|
|
113
|
-
editHandler: handler.editHandler,
|
|
114
|
-
holder,
|
|
115
|
-
destroy: () => {
|
|
116
|
-
if ("destroy" in handler.editHandler) handler.editHandler.destroy();
|
|
117
|
-
if (typeof handler.destroy == "function") handler.destroy();
|
|
118
|
-
holder.remove();
|
|
119
|
-
}
|
|
120
|
-
};
|
|
121
|
-
}
|
|
122
|
-
(0, import_tape.default)("\n", (test) => {
|
|
123
|
-
test.comment("-***- NumBinaryEditor.unit.spec -***-");
|
|
124
|
-
test.end();
|
|
125
|
-
});
|
|
126
|
-
(0, import_tape.default)("handler methods", async (test) => {
|
|
127
|
-
const { editHandler, destroy } = await getNumericHandler();
|
|
128
|
-
editHandler.termsetting.tw.q = { mode: "continuous" };
|
|
129
|
-
test.deepEqual(
|
|
130
|
-
await editHandler.getDefaultQ(),
|
|
131
|
-
{
|
|
132
|
-
mode: "binary",
|
|
133
|
-
type: "custom-bin",
|
|
134
|
-
lst: [
|
|
135
|
-
{
|
|
136
|
-
startunbounded: true,
|
|
137
|
-
startinclusive: false,
|
|
138
|
-
stopinclusive: false,
|
|
139
|
-
stop: 50,
|
|
140
|
-
label: "<50",
|
|
141
|
-
range: '<span style="font-family:Times;font-style:italic;">x</span> <50'
|
|
142
|
-
},
|
|
143
|
-
{
|
|
144
|
-
stopunbounded: true,
|
|
145
|
-
startinclusive: true,
|
|
146
|
-
stopinclusive: false,
|
|
147
|
-
start: 50,
|
|
148
|
-
label: "\u226550",
|
|
149
|
-
range: '<span style="font-family:Times;font-style:italic;">x</span> \u226550'
|
|
150
|
-
}
|
|
151
|
-
],
|
|
152
|
-
cutoffType: "normal"
|
|
153
|
-
},
|
|
154
|
-
"should give the expected defaultQ"
|
|
155
|
-
);
|
|
156
|
-
if (test._ok) destroy();
|
|
157
|
-
test.end();
|
|
158
|
-
});
|
|
159
|
-
(0, import_tape.default)("initial rendered UI", async (test) => {
|
|
160
|
-
const { editHandler, holder, destroy } = await getNumericHandler();
|
|
161
|
-
await editHandler.showEditMenu(holder);
|
|
162
|
-
test.equal(editHandler.dom?.density_div.selectAll("svg").size(), 1, `should render a density plot svg`);
|
|
163
|
-
test.equal(
|
|
164
|
-
editHandler.dom.boundaryInclusionDiv.selectAll("option").size(),
|
|
165
|
-
2,
|
|
166
|
-
`should render a boundary inclusion dropdown with 2 options`
|
|
167
|
-
);
|
|
168
|
-
test.equal(
|
|
169
|
-
editHandler.dom.cutoff_div.selectAll(`input[type='number']`).size(),
|
|
170
|
-
2,
|
|
171
|
-
`should render cutoff inputs, absolute and in percentile`
|
|
172
|
-
);
|
|
173
|
-
test.equal(
|
|
174
|
-
editHandler.dom.cutoff_div.selectAll(`input[type='checkbox']`).size(),
|
|
175
|
-
1,
|
|
176
|
-
`should render cutoff option for percentile`
|
|
177
|
-
);
|
|
178
|
-
test.equal(editHandler.dom.cutoffInputPercentile.style("display"), "none", `should hide percentile input by default`);
|
|
179
|
-
editHandler.dom.cutoffPercentileCheckbox.property("checked", true);
|
|
180
|
-
editHandler.dom.cutoffPercentileCheckbox.node().dispatchEvent(new Event("input", { bubbles: true }));
|
|
181
|
-
await sleep(0);
|
|
182
|
-
test.equal(
|
|
183
|
-
editHandler.dom.cutoffInputPercentile.style("display"),
|
|
184
|
-
"inline-block",
|
|
185
|
-
`should show the percentile input when the checkbox is checked`
|
|
186
|
-
);
|
|
187
|
-
test.equal(
|
|
188
|
-
editHandler.dom.cutoffInputPercentile.property("value"),
|
|
189
|
-
"50",
|
|
190
|
-
`should default to 50% percentile input value`
|
|
191
|
-
);
|
|
192
|
-
const newCutoff = 6.3475409836;
|
|
193
|
-
const ranges = editHandler.dom.inputsDiv.node().querySelectorAll('div[name="range"]');
|
|
194
|
-
test.equal(ranges[0].innerText, `x \u2264${newCutoff}`, `should render the expected first bin range`);
|
|
195
|
-
test.equal(ranges[1].innerText, `x >${newCutoff}`, `should render the expected last bin range`);
|
|
196
|
-
const binInputs = editHandler.dom.inputsDiv.node().querySelectorAll("input");
|
|
197
|
-
test.equal(binInputs[0].value, `\u2264${newCutoff}`, `should render the expected first bin input value`);
|
|
198
|
-
test.equal(binInputs[1].value, `>${newCutoff}`, `should render the expected last bin input value`);
|
|
199
|
-
if (test._ok) destroy();
|
|
200
|
-
test.end();
|
|
201
|
-
});
|
|
202
|
-
(0, import_tape.default)("cutoff interactivity", async (test) => {
|
|
203
|
-
const { editHandler, holder, destroy } = await getNumericHandler();
|
|
204
|
-
await editHandler.showEditMenu(holder);
|
|
205
|
-
const lines = editHandler.handler.density.dom.binsize_g.selectAll("line");
|
|
206
|
-
test.equal(lines.size(), 1, `should render only one draggable line in the density plot`);
|
|
207
|
-
const line = lines.node();
|
|
208
|
-
const x1 = Number(line.getAttribute("x1"));
|
|
209
|
-
editHandler.dom.boundaryInclusionSelect.property("value", "startinclusive");
|
|
210
|
-
editHandler.dom.boundaryInclusionSelect.node().dispatchEvent(new Event("change", { bubbles: true }));
|
|
211
|
-
const newCutoff = 500;
|
|
212
|
-
editHandler.dom.cutoffInput.property("value", newCutoff);
|
|
213
|
-
editHandler.dom.cutoffInput.node().dispatchEvent(new Event("change", { bubbles: true }));
|
|
214
|
-
const ranges = editHandler.dom.inputsDiv.node().querySelectorAll('div[name="range"]');
|
|
215
|
-
test.equal(ranges[0].innerText, `x <${newCutoff}`, `should render the expected first bin range`);
|
|
216
|
-
test.equal(ranges[1].innerText, `x \u2265${newCutoff}`, `should render the expected last bin range`);
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const binInputs = editHandler.dom.inputsDiv.node().querySelectorAll("input");
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test.equal(binInputs[0].value, `<${newCutoff}`, `should render the expected first bin input value`);
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|
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test.equal(binInputs[1].value, `\u2265${newCutoff}`, `should render the expected last bin input value`);
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|
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const line2 = editHandler.handler.density.dom.binsize_g.select("line").node();
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test.true(x1 <= Number(line2.getAttribute("x1")), "should trigger the density line to move to the right");
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|
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editHandler.dom.cutoffPercentileCheckbox.property("checked", true);
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editHandler.dom.cutoffPercentileCheckbox.node().dispatchEvent(new Event("input", { bubbles: true }));
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editHandler.dom.cutoffInputPercentile.property("value", 70);
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editHandler.dom.cutoffInputPercentile.node().dispatchEvent(new Event("change", { bubbles: true }));
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await sleep(0);
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|
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{
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|
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const lines2 = [...editHandler.handler.density.dom.binsize_g.node().querySelectorAll("line")];
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|
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test.deepEqual(
|
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|
-
lines2.map((l) => l.getAttribute("x1")),
|
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231
|
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["116"],
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232
|
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`should re-render a draggable line in the updated x-position`
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|
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);
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|
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const ranges2 = editHandler.dom.inputsDiv.node().querySelectorAll('div[name="range"]');
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|
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test.equal(ranges2[0].innerText, `x <${pct70}`, `should render the expected first bin range`);
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|
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test.equal(ranges2[1].innerText, `x \u2265${pct70}`, `should render the expected last bin range`);
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|
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const binInputs2 = editHandler.dom.inputsDiv.node().querySelectorAll("input");
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|
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test.equal(binInputs2[0].value, `<${pct70}`, `should render the expected first bin input value`);
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|
239
|
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test.equal(binInputs2[1].value, `\u2265${pct70}`, `should render the expected last bin input value`);
|
|
240
|
-
}
|
|
241
|
-
test.deepEqual(
|
|
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|
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editHandler.getEditedQ(false),
|
|
243
|
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{
|
|
244
|
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mode: "binary",
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|
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type: "custom-bin",
|
|
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|
-
lst: [
|
|
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|
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{
|
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248
|
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startunbounded: true,
|
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249
|
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stop: pct70,
|
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250
|
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startinclusive: false,
|
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|
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stopinclusive: false,
|
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|
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label: `<${pct70}`,
|
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253
|
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range: `<span style="font-family:Times;font-style:italic;">x</span> <${pct70}`
|
|
254
|
-
},
|
|
255
|
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{
|
|
256
|
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start: pct70,
|
|
257
|
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startinclusive: true,
|
|
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|
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stopinclusive: false,
|
|
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|
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stopunbounded: true,
|
|
260
|
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label: `\u2265${pct70}`,
|
|
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|
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range: `<span style="font-family:Times;font-style:italic;">x</span> \u2265${pct70}`
|
|
262
|
-
}
|
|
263
|
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]
|
|
264
|
-
},
|
|
265
|
-
`should give the expected edited q object`
|
|
266
|
-
);
|
|
267
|
-
const density_div = editHandler.dom.density_div.node();
|
|
268
|
-
await editHandler.showEditMenu(holder);
|
|
269
|
-
test.equal(
|
|
270
|
-
density_div,
|
|
271
|
-
editHandler.dom.density_div.node(),
|
|
272
|
-
`should not re-render the menu when the holder has not changed`
|
|
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|
-
);
|
|
274
|
-
await editHandler.undoEdits();
|
|
275
|
-
await sleep(0);
|
|
276
|
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{
|
|
277
|
-
const lines2 = [...editHandler.handler.density.dom.binsize_g.node().querySelectorAll("line")];
|
|
278
|
-
test.deepEqual(
|
|
279
|
-
lines2.map((l) => l.getAttribute("x1")),
|
|
280
|
-
["11"],
|
|
281
|
-
`should render a draggable line in the expected x-position`
|
|
282
|
-
);
|
|
283
|
-
}
|
|
284
|
-
if (test._ok) destroy();
|
|
285
|
-
test.end();
|
|
286
|
-
});
|
|
287
|
-
(0, import_tape.default)("converted term", async (test) => {
|
|
288
|
-
const { editHandler, holder, destroy } = await getNumericHandler({ term: getConvertedTerm() });
|
|
289
|
-
await editHandler.showEditMenu(holder);
|
|
290
|
-
test.equal(
|
|
291
|
-
editHandler.dom.cutoffInput.property("value"),
|
|
292
|
-
String(Number((pct50 * DAY_TO_YEAR).toFixed(2))),
|
|
293
|
-
`should fill the cutoff input in years`
|
|
294
|
-
);
|
|
295
|
-
editHandler.dom.cutoffInput.property("value", 5);
|
|
296
|
-
editHandler.dom.cutoffInput.node().dispatchEvent(new Event("change", { bubbles: true }));
|
|
297
|
-
const editedQ = editHandler.getEditedQ(false);
|
|
298
|
-
test.deepEqual(
|
|
299
|
-
[editedQ.lst[0].stop, editedQ.lst[1].start],
|
|
300
|
-
[1826.25, 1826.25],
|
|
301
|
-
`should store a cutoff typed in years as days`
|
|
302
|
-
);
|
|
303
|
-
test.deepEqual(
|
|
304
|
-
editedQ.lst.map((bin) => bin.label),
|
|
305
|
-
// the default boundary inclusion is stopinclusive
|
|
306
|
-
["\u22645y", ">5y"],
|
|
307
|
-
`should label the two bins in years`
|
|
308
|
-
);
|
|
309
|
-
if (test._ok) destroy();
|
|
310
|
-
test.end();
|
|
311
|
-
});
|
|
312
|
-
//# sourceMappingURL=NumBinaryEditor.unit.spec-GCGZMJYF.js.map
|
|
@@ -1,105 +0,0 @@
|
|
|
1
|
-
import {
|
|
2
|
-
make_one_checkbox
|
|
3
|
-
} from "./chunk-QJ3HYZH3.js";
|
|
4
|
-
import "./chunk-HJ6L54YS.js";
|
|
5
|
-
import {
|
|
6
|
-
HandlerBase
|
|
7
|
-
} from "./chunk-KV4W2ACA.js";
|
|
8
|
-
import "./chunk-DMWOK4DS.js";
|
|
9
|
-
import "./chunk-ELJX3QIQ.js";
|
|
10
|
-
import "./chunk-5IMFPVGT.js";
|
|
11
|
-
import "./chunk-EEB5VE2A.js";
|
|
12
|
-
import "./chunk-6RRZRISL.js";
|
|
13
|
-
import "./chunk-2KM4PRQM.js";
|
|
14
|
-
import "./chunk-VMRO6DMC.js";
|
|
15
|
-
import "./chunk-HKKTNIMX.js";
|
|
16
|
-
import "./chunk-GMRIEUBW.js";
|
|
17
|
-
import "./chunk-4EZLVENZ.js";
|
|
18
|
-
import "./chunk-WINIL2KN.js";
|
|
19
|
-
import "./chunk-PF4DSFDR.js";
|
|
20
|
-
import "./chunk-7X6NF7NI.js";
|
|
21
|
-
import "./chunk-W5J3LTYS.js";
|
|
22
|
-
import "./chunk-Z2ZITHT4.js";
|
|
23
|
-
import "./chunk-4OLM3KSB.js";
|
|
24
|
-
import "./chunk-FXQXCOII.js";
|
|
25
|
-
import "./chunk-TLT4YIG3.js";
|
|
26
|
-
import "./chunk-5R63Q5KH.js";
|
|
27
|
-
import "./chunk-I6Y4O3RR.js";
|
|
28
|
-
import "./chunk-Q5RDQNIT.js";
|
|
29
|
-
import "./chunk-DQC5FFGV.js";
|
|
30
|
-
import "./chunk-HS5PO5ZQ.js";
|
|
31
|
-
|
|
32
|
-
// termsetting/handlers/NumContEditor.ts
|
|
33
|
-
var NumContEditor = class extends HandlerBase {
|
|
34
|
-
constructor(opts, handler) {
|
|
35
|
-
super(opts);
|
|
36
|
-
this.dom = {};
|
|
37
|
-
this.termsetting = opts.termsetting;
|
|
38
|
-
this.tw = opts.termsetting.tw;
|
|
39
|
-
this.handler = handler;
|
|
40
|
-
this.q = this.setDefaultQ();
|
|
41
|
-
}
|
|
42
|
-
setDefaultQ() {
|
|
43
|
-
if (this.tw.q.mode == "continuous") return JSON.parse(JSON.stringify(this.tw.q));
|
|
44
|
-
return { mode: "continuous" };
|
|
45
|
-
}
|
|
46
|
-
async showEditMenu(div) {
|
|
47
|
-
this.tw = this.handler.tw;
|
|
48
|
-
this.q = this.setDefaultQ();
|
|
49
|
-
if (this.dom.inputsDiv) {
|
|
50
|
-
if (div.node().contains(this.dom.inputsDiv.node())) return;
|
|
51
|
-
else delete this.dom.inputsDiv;
|
|
52
|
-
}
|
|
53
|
-
this.dom.density_div = div.append("div");
|
|
54
|
-
await this.handler.density.showViolin(this.dom.density_div);
|
|
55
|
-
this.dom.inputsDiv = div.append("div");
|
|
56
|
-
this.mayShowValueconversionMsg(this.dom.inputsDiv);
|
|
57
|
-
if (this.termsetting.opts.usecase?.target == "matrix") {
|
|
58
|
-
this.dom.convert2ZCheckbox = await make_one_checkbox({
|
|
59
|
-
holder: this.dom.inputsDiv.append("div"),
|
|
60
|
-
labeltext: "Convert to Z-score",
|
|
61
|
-
checked: this.q.convert2ZScore ? true : false,
|
|
62
|
-
divstyle: { display: "inline-block", padding: "3px 10px" },
|
|
63
|
-
callback: (checked) => {
|
|
64
|
-
this.q.convert2ZScore = checked;
|
|
65
|
-
if (checked) {
|
|
66
|
-
this.dom.scaleSelect.property("value", 1);
|
|
67
|
-
delete this.q.scale;
|
|
68
|
-
}
|
|
69
|
-
}
|
|
70
|
-
});
|
|
71
|
-
}
|
|
72
|
-
const selectDiv = this.dom.inputsDiv.append("div").style("display", "inline-block");
|
|
73
|
-
selectDiv.append("div").style("display", "inline-block").style("padding", "3px 10px").html("Scale values");
|
|
74
|
-
this.dom.scaleSelect = selectDiv.append("select").on("change", (event) => {
|
|
75
|
-
if (event.target.value == "1") delete this.q.scale;
|
|
76
|
-
else {
|
|
77
|
-
if (this.dom.convert2ZCheckbox) this.dom.convert2ZCheckbox.property("checked", false);
|
|
78
|
-
this.q.scale = Number(event.target.value);
|
|
79
|
-
}
|
|
80
|
-
});
|
|
81
|
-
this.dom.scaleSelect.selectAll("option").data([
|
|
82
|
-
{ html: "No Scaling", value: 1 },
|
|
83
|
-
{ html: "Per 10", value: 10 },
|
|
84
|
-
{ html: "Per 100", value: 100 },
|
|
85
|
-
{ html: "Per 1000", value: 1e3 }
|
|
86
|
-
]).enter().append("option").attr("value", (d) => d.value).html((d) => d.html).property("selected", (d) => "scale" in this.q && d.value == this.q.scale);
|
|
87
|
-
}
|
|
88
|
-
getEditedQ() {
|
|
89
|
-
const scaleValue = this.dom.scaleSelect.property("value");
|
|
90
|
-
if (scaleValue == "1") delete this.q.scale;
|
|
91
|
-
else this.q.scale = Number(scaleValue);
|
|
92
|
-
if (this.dom.convert2ZCheckbox) this.q.convert2ZScore = this.dom.convert2ZCheckbox.property("checked");
|
|
93
|
-
return this.q;
|
|
94
|
-
}
|
|
95
|
-
destroy() {
|
|
96
|
-
for (const name of Object.keys(this.dom)) {
|
|
97
|
-
this.dom[name].remove();
|
|
98
|
-
delete this.dom[name];
|
|
99
|
-
}
|
|
100
|
-
}
|
|
101
|
-
};
|
|
102
|
-
export {
|
|
103
|
-
NumContEditor
|
|
104
|
-
};
|
|
105
|
-
//# sourceMappingURL=NumContEditor-IM6RRDGU.js.map
|