@sjcrh/proteinpaint-client 2.184.0 → 2.185.0

package/dist/singleCellGeneExpression.unit.spec-36E4SRKB.js

@@ -1,151 +0,0 @@
-import {
-  SearchHandler
-} from "./chunk-LJS24D4U.js";
-import {
-  require_tape
-} from "./chunk-QWOE5YTB.js";
-import "./chunk-KBYRXJ6Y.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-Y7S3EY6T.js";
-import "./chunk-RCYTUKAJ.js";
-import "./chunk-A6TQGNDQ.js";
-import "./chunk-HYZG6OPC.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-LSEFWW72.js";
-import "./chunk-B2F23ESD.js";
-import "./chunk-IQIXGTQV.js";
-import "./chunk-UCLS2SVB.js";
-import "./chunk-MVTCBVSX.js";
-import "./chunk-F6V4AYWP.js";
-import "./chunk-5OHXYXLD.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-JOT4WDJE.js";
-import "./chunk-OTCYJP7G.js";
-import "./chunk-GXINX3WK.js";
-import {
-  SINGLECELL_GENE_EXPRESSION
-} from "./chunk-SOED2SLH.js";
-import "./chunk-XRVBHNCW.js";
-import "./chunk-BEWDIM6H.js";
-import "./chunk-IH7ILDJS.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-TOU7EVFQ.js";
-import "./chunk-OAWQ6LOO.js";
-import "./chunk-SEEYV6P2.js";
-import {
-  select_default
-} from "./chunk-NDWTN4U5.js";
-import "./chunk-OMR2DT66.js";
-import {
-  __toESM
-} from "./chunk-HFNDKYVF.js";
-
-// termdb/handlers/test/singleCellGeneExpression.unit.spec.ts
-var import_tape = __toESM(require_tape(), 1);
-function getHolder() {
-  return select_default("body").append("div");
-}
-function getUsecase(sample = { id: "sample-A" }) {
-  return {
-    target: "sampleScatter",
-    detail: "term",
-    specialCase: {
-      config: { sample }
-    }
-  };
-}
-(0, import_tape.default)("\n", function(test) {
-  test.comment("-***- termdb/handlers/singleCellGeneExpression -***-");
-  test.end();
-});
-(0, import_tape.default)("validateOpts() should require callback, app, holder, genomeObj, and usecase.specialCase.config.sample", (test) => {
-  const handler = new SearchHandler();
-  const holder = getHolder();
-  test.throws(
-    () => handler.validateOpts({
-      holder,
-      app: { vocabApi: { termdbConfig: { queries: { singleCell: { geneExpression: {} } } } } },
-      genomeObj: {},
-      usecase: getUsecase()
-    }),
-    /callback is required/,
-    "Should throw when callback is missing"
-  );
-  test.throws(
-    () => handler.validateOpts({
-      holder,
-      callback: () => {
-      },
-      genomeObj: {},
-      usecase: getUsecase()
-    }),
-    /app is required/,
-    "Should throw when app is missing"
-  );
-  test.throws(
-    () => handler.validateOpts({
-      callback: () => {
-      },
-      app: { vocabApi: { termdbConfig: {} } },
-      genomeObj: {},
-      usecase: getUsecase()
-    }),
-    /holder is required/,
-    "Should throw when holder is missing"
-  );
-  test.throws(
-    () => handler.validateOpts({
-      holder,
-      callback: () => {
-      },
-      app: { vocabApi: { termdbConfig: {} } },
-      usecase: getUsecase()
-    }),
-    /genomeObj is required/,
-    "Should throw when genomeObj is missing"
-  );
-  if (test["_ok"]) holder.remove();
-  test.end();
-});
-(0, import_tape.default)("selectGene() should throw when no gene is selected", async (test) => {
-  const handler = new SearchHandler();
-  handler.app = { vocabApi: { termdbConfig: {} } };
-  handler.callback = () => {
-  };
-  try {
-    await handler.selectGene(void 0, { id: "sample-A" });
-    test.fail("Should throw when no gene is selected");
-  } catch (e) {
-    test.match(String(e), /No gene selected/, "Should throw expected message when gene is missing");
-  }
-  test.end();
-});
-(0, import_tape.default)("selectGene() should call callback with configured unit and default unit fallback", async (test) => {
-  const handler = new SearchHandler();
-  const sample = { id: "sample-A", type: "tumor" };
-  let selected;
-  handler.callback = (t) => {
-    selected = t;
-  };
-  handler.app = {
-    vocabApi: {
-      termdbConfig: {
-        queries: {
-          singleCell: {
-            geneExpression: { unit: "log2 CPM" }
-          }
-        }
-      }
-    }
-  };
-  await handler.selectGene("TP53", sample);
-  test.equal(selected?.gene, "TP53", "Should pass selected gene");
-  test.equal(selected?.name, "TP53 log2 CPM", "Should include configured unit in term name");
-  test.equal(selected?.type, SINGLECELL_GENE_EXPRESSION, "Should set type to singleCellGeneExpression");
-  test.deepEqual(selected?.sample, sample, "Should pass through selected sample");
-  handler.app = { vocabApi: { termdbConfig: { queries: { singleCell: { geneExpression: {} } } } } };
-  await handler.selectGene("GATA3", sample);
-  test.equal(selected?.name, "GATA3 Gene Expression", "Should use default unit when config unit is not provided");
-  test.end();
-});
-//# sourceMappingURL=singleCellGeneExpression.unit.spec-36E4SRKB.js.map

package/dist/singleCellPlot-FI6IDYGC.js

@@ -1,51 +0,0 @@
-import {
-  componentInit,
-  getContourImage,
-  getDefaultSingleCellSettings,
-  getMouseNDC,
-  getPlotConfig,
-  scatterInit
-} from "./chunk-6NAYFS4V.js";
-import "./chunk-5UG7ZKPU.js";
-import "./chunk-72PLI3GC.js";
-import "./chunk-IBZGIOXS.js";
-import "./chunk-HZETQJGD.js";
-import "./chunk-PRZWSBMA.js";
-import "./chunk-KBYRXJ6Y.js";
-import "./chunk-HJ6L54YS.js";
-import "./chunk-Y7S3EY6T.js";
-import "./chunk-RCYTUKAJ.js";
-import "./chunk-A6TQGNDQ.js";
-import "./chunk-HYZG6OPC.js";
-import "./chunk-FN5XPUPH.js";
-import "./chunk-LSEFWW72.js";
-import "./chunk-B2F23ESD.js";
-import "./chunk-IQIXGTQV.js";
-import "./chunk-UCLS2SVB.js";
-import "./chunk-MVTCBVSX.js";
-import "./chunk-F6V4AYWP.js";
-import "./chunk-5OHXYXLD.js";
-import "./chunk-DQC5FFGV.js";
-import "./chunk-JOT4WDJE.js";
-import "./chunk-OTCYJP7G.js";
-import "./chunk-GXINX3WK.js";
-import "./chunk-SOED2SLH.js";
-import "./chunk-XRVBHNCW.js";
-import "./chunk-BEWDIM6H.js";
-import "./chunk-IH7ILDJS.js";
-import "./chunk-LOZEKOES.js";
-import "./chunk-TOU7EVFQ.js";
-import "./chunk-OAWQ6LOO.js";
-import "./chunk-SEEYV6P2.js";
-import "./chunk-NDWTN4U5.js";
-import "./chunk-OMR2DT66.js";
-import "./chunk-HFNDKYVF.js";
-export {
-  componentInit,
-  getContourImage,
-  getDefaultSingleCellSettings,
-  getMouseNDC,
-  getPlotConfig,
-  scatterInit
-};
-//# sourceMappingURL=singleCellPlot-FI6IDYGC.js.map