@research-copilot/plugin 1.1.17 → 1.1.19

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (800) hide show
  1. package/README.md +18 -9
  2. package/dist/.claude-plugin/plugin.json +1 -1
  3. package/dist/.codex-plugin/plugin.toml +1 -1
  4. package/dist/.cursor-plugin/plugin.json +1 -1
  5. package/dist/.gemini-plugin/plugin.json +1 -1
  6. package/dist/.opencode-plugin/plugin.json +1 -1
  7. package/dist/.windsurf-plugin/plugin.json +1 -1
  8. package/dist/skills/ablation-planner/SKILL.md +126 -0
  9. package/dist/skills/alphaxiv/SKILL.md +186 -0
  10. package/dist/skills/analyze-results/SKILL.md +45 -0
  11. package/dist/skills/arxiv/SKILL.md +210 -0
  12. package/dist/skills/auto-paper-improvement-loop/SKILL.md +574 -0
  13. package/dist/skills/auto-review-loop/SKILL.md +370 -0
  14. package/dist/skills/auto-review-loop-llm/SKILL.md +247 -0
  15. package/dist/skills/auto-review-loop-minimax/SKILL.md +290 -0
  16. package/dist/skills/benchmark-paper-template/SKILL.md +142 -0
  17. package/dist/skills/benchmark-paper-template/references/benchmark-design.md +180 -0
  18. package/dist/skills/benchmark-paper-template/references/checklist.md +113 -0
  19. package/dist/skills/benchmark-paper-template/references/construction-pipeline.md +127 -0
  20. package/dist/skills/benchmark-paper-template/references/experiments.md +159 -0
  21. package/dist/skills/benchmark-paper-template/references/gap-analysis.md +86 -0
  22. package/dist/skills/benchmark-paper-template/references/instantiation-template.md +194 -0
  23. package/dist/skills/benchmark-paper-template/references/orchestrator-notes.md +96 -0
  24. package/dist/skills/benchmark-paper-template/references/paper-structure.md +209 -0
  25. package/dist/skills/citation-audit/SKILL.md +494 -0
  26. package/dist/skills/claims-drafting/SKILL.md +239 -0
  27. package/dist/skills/comm-lit-review/SKILL.md +299 -0
  28. package/dist/skills/comm-lit-review/references/domain-taxonomy.md +57 -0
  29. package/dist/skills/comm-lit-review/references/output-template.md +37 -0
  30. package/dist/skills/comm-lit-review/references/source-policy.md +99 -0
  31. package/dist/skills/comm-lit-review/references/venue-tiering.md +112 -0
  32. package/dist/skills/composer/SKILL.md +840 -0
  33. package/dist/skills/composer/references/section_guides.md +675 -0
  34. package/dist/skills/composer/references/writing_standards.md +629 -0
  35. package/dist/skills/composer/scripts/chapter_quality_check.py +470 -0
  36. package/dist/skills/composer/scripts/final_evaluation.py +550 -0
  37. package/dist/skills/deepxiv/SKILL.md +142 -0
  38. package/dist/skills/dse-loop/SKILL.md +277 -0
  39. package/dist/skills/embodiment-description/SKILL.md +129 -0
  40. package/dist/skills/exa-search/SKILL.md +192 -0
  41. package/dist/skills/experiment-audit/SKILL.md +262 -0
  42. package/dist/skills/experiment-bridge/SKILL.md +316 -0
  43. package/dist/skills/experiment-plan/SKILL.md +249 -0
  44. package/dist/skills/experiment-queue/SKILL.md +380 -0
  45. package/dist/skills/experiment-queue/scripts/build_manifest.py +142 -0
  46. package/dist/skills/experiment-queue/scripts/queue_manager.py +426 -0
  47. package/dist/skills/feishu-notify/SKILL.md +155 -0
  48. package/dist/skills/figure-description/SKILL.md +138 -0
  49. package/dist/skills/figure-designer/SKILL.md +207 -0
  50. package/dist/skills/figure-designer/references/design-rules.md +99 -0
  51. package/dist/skills/figure-designer/references/experimental-results.md +127 -0
  52. package/dist/skills/figure-designer/references/motivated-example.md +138 -0
  53. package/dist/skills/figure-designer/references/solution-overview.md +145 -0
  54. package/dist/skills/figure-designer/references/tools.md +124 -0
  55. package/dist/skills/figure-spec/SKILL.md +252 -0
  56. package/dist/skills/figure-spec/scripts/figure_renderer.py +799 -0
  57. package/dist/skills/formula-derivation/SKILL.md +280 -0
  58. package/dist/skills/gemini-search/SKILL.md +205 -0
  59. package/dist/skills/grant-proposal/SKILL.md +625 -0
  60. package/dist/skills/humanizer/AGENTS.md +25 -0
  61. package/dist/skills/humanizer/SKILL.md +621 -0
  62. package/dist/skills/idea-creator/SKILL.md +311 -0
  63. package/dist/skills/idea-discovery/SKILL.md +340 -0
  64. package/dist/skills/idea-discovery-robot/SKILL.md +362 -0
  65. package/dist/skills/idea-evaluator/SKILL.md +265 -0
  66. package/dist/skills/idea-evaluator/references/fatal-flaws.md +192 -0
  67. package/dist/skills/idea-evaluator/references/five-dimensions.md +251 -0
  68. package/dist/skills/idea-evaluator/references/lifecycle-capability-matching.md +177 -0
  69. package/dist/skills/idea-evaluator/references/paradigm-elephant.md +112 -0
  70. package/dist/skills/idea-evaluator/references/paradigm-examples.md +107 -0
  71. package/dist/skills/idea-evaluator/references/paradigm-first-principles.md +115 -0
  72. package/dist/skills/idea-evaluator/references/paradigm-hamming.md +137 -0
  73. package/dist/skills/idea-evaluator/references/paradigm-shift-probe.md +160 -0
  74. package/dist/skills/idea-evaluator/references/paradigm-technology-cycle.md +116 -0
  75. package/dist/skills/idea-evaluator/references/worked-examples.md +206 -0
  76. package/dist/skills/interview-cheatsheet/SKILL.md +245 -0
  77. package/dist/skills/intro-drafter/SKILL.md +250 -0
  78. package/dist/skills/intro-drafter/references/contribution-patterns.md +116 -0
  79. package/dist/skills/intro-drafter/references/flowchart.md +204 -0
  80. package/dist/skills/intro-drafter/references/paper-types.md +155 -0
  81. package/dist/skills/intro-drafter/references/running-example.md +133 -0
  82. package/dist/skills/intro-drafter/references/worked-examples.md +161 -0
  83. package/dist/skills/invention-structuring/SKILL.md +188 -0
  84. package/dist/skills/jurisdiction-format/SKILL.md +192 -0
  85. package/dist/skills/kill-argument/SKILL.md +384 -0
  86. package/dist/skills/llm-wiki/.mise.toml +2 -0
  87. package/dist/skills/llm-wiki/.nvmrc +1 -0
  88. package/dist/skills/llm-wiki/AGENTS.md +132 -0
  89. package/dist/skills/llm-wiki/CHANGELOG.md +459 -0
  90. package/dist/skills/llm-wiki/CLAUDE.md +109 -0
  91. package/dist/skills/llm-wiki/HERMES.md +44 -0
  92. package/dist/skills/llm-wiki/SKILL.md +1133 -0
  93. package/dist/skills/llm-wiki/assets/graph-demo.gif +0 -0
  94. package/dist/skills/llm-wiki/assets/graph-preview.png +0 -0
  95. package/dist/skills/llm-wiki/deps/LICENSE-d3.txt +13 -0
  96. package/dist/skills/llm-wiki/deps/LICENSE-marked.txt +44 -0
  97. package/dist/skills/llm-wiki/deps/LICENSE-purify.txt +568 -0
  98. package/{LICENSE → dist/skills/llm-wiki/deps/LICENSE-roughjs.txt} +1 -1
  99. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/SKILL.md +261 -0
  100. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/references/config/first-time-setup.md +106 -0
  101. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/cdp.ts +179 -0
  102. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/constants.ts +13 -0
  103. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/defuddle-converter.ts +58 -0
  104. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/html-to-markdown.ts +135 -0
  105. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/legacy-converter.ts +629 -0
  106. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/main.ts +314 -0
  107. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/markdown-conversion-shared.ts +305 -0
  108. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/media-localizer.ts +317 -0
  109. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/package.json +14 -0
  110. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/paths.ts +29 -0
  111. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/package.json +9 -0
  112. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/src/index.test.ts +307 -0
  113. package/dist/skills/llm-wiki/deps/baoyu-url-to-markdown/scripts/vendor/baoyu-chrome-cdp/src/index.ts +523 -0
  114. package/dist/skills/llm-wiki/deps/d3.min.js +2 -0
  115. package/dist/skills/llm-wiki/deps/marked.min.js +6 -0
  116. package/dist/skills/llm-wiki/deps/purify.min.js +3 -0
  117. package/dist/skills/llm-wiki/deps/rough.min.js +7 -0
  118. package/dist/skills/llm-wiki/deps/youtube-transcript/SKILL.md +47 -0
  119. package/dist/skills/llm-wiki/deps/youtube-transcript/scripts/get_transcript.py +72 -0
  120. package/dist/skills/llm-wiki/docs/design/oriental-atlas/DESIGN.md +183 -0
  121. package/dist/skills/llm-wiki/docs/design/oriental-atlas/design-brief.md +170 -0
  122. package/dist/skills/llm-wiki/docs/design/oriental-atlas/oriental-editorial-atlas.html +1908 -0
  123. package/dist/skills/llm-wiki/docs/design/oriental-atlas/reviews/result-review.md +68 -0
  124. package/dist/skills/llm-wiki/docs/plans/2026-06-15-omp-tool-status-events-phased-plan.md +655 -0
  125. package/dist/skills/llm-wiki/docs/plans/2026-06-15-omp-tool-status-events-progress.json +913 -0
  126. package/dist/skills/llm-wiki/docs/spark/2026-06-15-omp-tool-status-events-design.md +174 -0
  127. package/dist/skills/llm-wiki/install.ps1 +87 -0
  128. package/dist/skills/llm-wiki/install.sh +722 -0
  129. package/dist/skills/llm-wiki/package-lock.json +10309 -0
  130. package/dist/skills/llm-wiki/package.json +24 -0
  131. package/dist/skills/llm-wiki/packages/graph-engine/package.json +33 -0
  132. package/dist/skills/llm-wiki/packages/graph-engine/src/anim/.gitkeep +1 -0
  133. package/dist/skills/llm-wiki/packages/graph-engine/src/anim/index.ts +179 -0
  134. package/dist/skills/llm-wiki/packages/graph-engine/src/diff.ts +121 -0
  135. package/dist/skills/llm-wiki/packages/graph-engine/src/graph-node.ts +37 -0
  136. package/dist/skills/llm-wiki/packages/graph-engine/src/index.ts +140 -0
  137. package/dist/skills/llm-wiki/packages/graph-engine/src/model/atlas.ts +18 -0
  138. package/dist/skills/llm-wiki/packages/graph-engine/src/model/index.ts +6 -0
  139. package/dist/skills/llm-wiki/packages/graph-engine/src/model/labels.ts +11 -0
  140. package/dist/skills/llm-wiki/packages/graph-engine/src/model/learning.ts +8 -0
  141. package/dist/skills/llm-wiki/packages/graph-engine/src/model/legacy-helpers.ts +1373 -0
  142. package/dist/skills/llm-wiki/packages/graph-engine/src/model/queue.ts +7 -0
  143. package/dist/skills/llm-wiki/packages/graph-engine/src/model/storage.ts +4 -0
  144. package/dist/skills/llm-wiki/packages/graph-engine/src/model/visibility.ts +9 -0
  145. package/dist/skills/llm-wiki/packages/graph-engine/src/render/.gitkeep +1 -0
  146. package/dist/skills/llm-wiki/packages/graph-engine/src/render/index.ts +59 -0
  147. package/dist/skills/llm-wiki/packages/graph-engine/src/render/legend.ts +25 -0
  148. package/dist/skills/llm-wiki/packages/graph-engine/src/render/model.ts +593 -0
  149. package/dist/skills/llm-wiki/packages/graph-engine/src/render/preview.ts +65 -0
  150. package/dist/skills/llm-wiki/packages/graph-engine/src/render/search.ts +48 -0
  151. package/dist/skills/llm-wiki/packages/graph-engine/src/render/static-renderer.ts +2783 -0
  152. package/dist/skills/llm-wiki/packages/graph-engine/src/render/toolbar.ts +40 -0
  153. package/dist/skills/llm-wiki/packages/graph-engine/src/render/viewport.ts +272 -0
  154. package/dist/skills/llm-wiki/packages/graph-engine/src/select/.gitkeep +1 -0
  155. package/dist/skills/llm-wiki/packages/graph-engine/src/select/index.ts +189 -0
  156. package/dist/skills/llm-wiki/packages/graph-engine/src/sim/index.ts +298 -0
  157. package/dist/skills/llm-wiki/packages/graph-engine/src/sim/pins.ts +96 -0
  158. package/dist/skills/llm-wiki/packages/graph-engine/src/themes/.gitkeep +1 -0
  159. package/dist/skills/llm-wiki/packages/graph-engine/src/themes/index.ts +8 -0
  160. package/dist/skills/llm-wiki/packages/graph-engine/src/themes/tokens.ts +107 -0
  161. package/dist/skills/llm-wiki/packages/graph-engine/src/types.ts +313 -0
  162. package/dist/skills/llm-wiki/packages/graph-engine/test/anim.test.ts +100 -0
  163. package/dist/skills/llm-wiki/packages/graph-engine/test/diff.test.ts +133 -0
  164. package/dist/skills/llm-wiki/packages/graph-engine/test/helpers.test.ts +275 -0
  165. package/dist/skills/llm-wiki/packages/graph-engine/test/learning.test.ts +259 -0
  166. package/dist/skills/llm-wiki/packages/graph-engine/test/preview.test.ts +56 -0
  167. package/dist/skills/llm-wiki/packages/graph-engine/test/queue.test.ts +114 -0
  168. package/dist/skills/llm-wiki/packages/graph-engine/test/render-model.test.ts +322 -0
  169. package/dist/skills/llm-wiki/packages/graph-engine/test/runtime-state.test.ts +281 -0
  170. package/dist/skills/llm-wiki/packages/graph-engine/test/search-and-legend.test.ts +111 -0
  171. package/dist/skills/llm-wiki/packages/graph-engine/test/select.test.ts +168 -0
  172. package/dist/skills/llm-wiki/packages/graph-engine/test/sim.test.ts +123 -0
  173. package/dist/skills/llm-wiki/packages/graph-engine/test/themes.test.ts +62 -0
  174. package/dist/skills/llm-wiki/packages/graph-engine/test/toolbar.test.ts +64 -0
  175. package/dist/skills/llm-wiki/packages/graph-engine/test/viewport.test.ts +167 -0
  176. package/dist/skills/llm-wiki/packages/graph-engine/tsconfig.json +17 -0
  177. package/dist/skills/llm-wiki/packages/graph-engine/vite.config.ts +15 -0
  178. package/dist/skills/llm-wiki/platforms/claude/CLAUDE.md +37 -0
  179. package/dist/skills/llm-wiki/platforms/claude/companions/llm-wiki-upgrade/SKILL.md +95 -0
  180. package/dist/skills/llm-wiki/platforms/codex/AGENTS.md +23 -0
  181. package/dist/skills/llm-wiki/scripts/adapter-state.sh +424 -0
  182. package/dist/skills/llm-wiki/scripts/build-graph-data.sh +395 -0
  183. package/dist/skills/llm-wiki/scripts/build-graph-html.sh +453 -0
  184. package/dist/skills/llm-wiki/scripts/cache.sh +352 -0
  185. package/dist/skills/llm-wiki/scripts/create-source-page.sh +100 -0
  186. package/dist/skills/llm-wiki/scripts/delete-helper.sh +68 -0
  187. package/dist/skills/llm-wiki/scripts/graph-analysis.js +732 -0
  188. package/dist/skills/llm-wiki/scripts/hook-session-start.sh +46 -0
  189. package/dist/skills/llm-wiki/scripts/init-wiki.sh +95 -0
  190. package/dist/skills/llm-wiki/scripts/lib/source-signal-eligibility.js +158 -0
  191. package/dist/skills/llm-wiki/scripts/lint-fix.sh +114 -0
  192. package/dist/skills/llm-wiki/scripts/lint-runner.sh +217 -0
  193. package/dist/skills/llm-wiki/scripts/runtime-context.sh +77 -0
  194. package/dist/skills/llm-wiki/scripts/shared-config.sh +83 -0
  195. package/dist/skills/llm-wiki/scripts/source-record-contract.tsv +10 -0
  196. package/dist/skills/llm-wiki/scripts/source-registry.sh +349 -0
  197. package/dist/skills/llm-wiki/scripts/source-registry.tsv +10 -0
  198. package/dist/skills/llm-wiki/scripts/source-signal-coverage.js +83 -0
  199. package/dist/skills/llm-wiki/scripts/validate-step1.sh +144 -0
  200. package/dist/skills/llm-wiki/scripts/wiki-compat.sh +267 -0
  201. package/dist/skills/llm-wiki/setup.sh +8 -0
  202. package/dist/skills/llm-wiki/templates/entity-template.md +30 -0
  203. package/dist/skills/llm-wiki/templates/graph-styles/wash/footer.html +27 -0
  204. package/dist/skills/llm-wiki/templates/graph-styles/wash/graph-wash-helpers.js +1326 -0
  205. package/dist/skills/llm-wiki/templates/graph-styles/wash/graph-wash.js +1009 -0
  206. package/dist/skills/llm-wiki/templates/graph-styles/wash/header.html +2002 -0
  207. package/dist/skills/llm-wiki/templates/index-en-template.md +51 -0
  208. package/dist/skills/llm-wiki/templates/index-template.md +51 -0
  209. package/dist/skills/llm-wiki/templates/log-en-template.md +11 -0
  210. package/dist/skills/llm-wiki/templates/log-template.md +11 -0
  211. package/dist/skills/llm-wiki/templates/overview-en-template.md +41 -0
  212. package/dist/skills/llm-wiki/templates/overview-template.md +41 -0
  213. package/dist/skills/llm-wiki/templates/purpose-en-template.md +16 -0
  214. package/dist/skills/llm-wiki/templates/purpose-template.md +16 -0
  215. package/dist/skills/llm-wiki/templates/query-template.md +19 -0
  216. package/dist/skills/llm-wiki/templates/schema-template.md +185 -0
  217. package/dist/skills/llm-wiki/templates/source-template.md +51 -0
  218. package/dist/skills/llm-wiki/templates/synthesis-template.md +25 -0
  219. package/dist/skills/llm-wiki/templates/topic-template.md +35 -0
  220. package/dist/skills/llm-wiki/tests/adapter-state.sh +338 -0
  221. package/dist/skills/llm-wiki/tests/browser/graph-density-preview.mjs +53 -0
  222. package/dist/skills/llm-wiki/tests/browser/graph-html-insights.mjs +41 -0
  223. package/dist/skills/llm-wiki/tests/browser/graph-node-slim.mjs +71 -0
  224. package/dist/skills/llm-wiki/tests/browser/graph-stage-4-5.mjs +717 -0
  225. package/dist/skills/llm-wiki/tests/expected/graph-data-empty.json +60 -0
  226. package/dist/skills/llm-wiki/tests/expected/graph-data-sample.json +396 -0
  227. package/dist/skills/llm-wiki/tests/expected/graph-interactive-basic.html +1736 -0
  228. package/dist/skills/llm-wiki/tests/expected/lint-output.txt +44 -0
  229. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/index.md +1 -0
  230. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/entities/Alpha.md +10 -0
  231. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/entities/Beta.md +7 -0
  232. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/entities/Delta.md +8 -0
  233. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/entities/Gamma.md +8 -0
  234. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/queries/20260422-abc.md +10 -0
  235. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/synthesis/Crystal.md +8 -0
  236. package/dist/skills/llm-wiki/tests/fixtures/coverage-sample-wiki/wiki/topics/Overview.md +9 -0
  237. package/dist/skills/llm-wiki/tests/fixtures/graph-data-empty-wiki/wiki/entities/.gitkeep +0 -0
  238. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/purpose.md +3 -0
  239. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/entities/Attention.md +7 -0
  240. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/entities/Decoder.md +7 -0
  241. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/entities/Encoder.md +7 -0
  242. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/entities/GPT.md +7 -0
  243. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/entities/Transformer.md +13 -0
  244. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/sources/paper.md +9 -0
  245. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/topics/arch.md +12 -0
  246. package/dist/skills/llm-wiki/tests/fixtures/graph-data-sample-wiki/wiki/topics/finetune.md +9 -0
  247. package/dist/skills/llm-wiki/tests/fixtures/graph-interactive-basic/wiki/graph-data.json +40 -0
  248. package/dist/skills/llm-wiki/tests/fixtures/graph-interactive-dense/wiki/graph-data.json +3965 -0
  249. package/dist/skills/llm-wiki/tests/fixtures/graph-interactive-multicomm/wiki/graph-data.json +212 -0
  250. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/index.md +14 -0
  251. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/entities/C++.md +6 -0
  252. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/entities/Lonely.md +4 -0
  253. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/entities/Other.md +8 -0
  254. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/entities/Real.md +7 -0
  255. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/sources/2026-01-01-test-source.md +15 -0
  256. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/sources/2026-02-01-inline-img.md +12 -0
  257. package/dist/skills/llm-wiki/tests/fixtures/lint-sample-wiki/wiki/topics/AIbasic.md +3 -0
  258. package/dist/skills/llm-wiki/tests/graph-analysis-helper.regression-1.sh +237 -0
  259. package/dist/skills/llm-wiki/tests/graph-browser-stage-4-5.regression-1.sh +157 -0
  260. package/dist/skills/llm-wiki/tests/graph-build-failures.regression-1.sh +91 -0
  261. package/dist/skills/llm-wiki/tests/graph-data-confidence-merge.regression-1.sh +309 -0
  262. package/dist/skills/llm-wiki/tests/graph-data-source-paths.regression-1.sh +49 -0
  263. package/dist/skills/llm-wiki/tests/graph-html-a11y.regression-1.sh +47 -0
  264. package/dist/skills/llm-wiki/tests/graph-html-brand-link.regression-1.sh +47 -0
  265. package/dist/skills/llm-wiki/tests/graph-html-density.regression-1.sh +228 -0
  266. package/dist/skills/llm-wiki/tests/graph-html-drawer-neighbors.regression-1.sh +47 -0
  267. package/dist/skills/llm-wiki/tests/graph-html-insights.regression-1.sh +80 -0
  268. package/dist/skills/llm-wiki/tests/graph-html-long-label.regression-1.sh +92 -0
  269. package/dist/skills/llm-wiki/tests/graph-html-minimap.regression-1.sh +51 -0
  270. package/dist/skills/llm-wiki/tests/graph-html-mobile.regression-1.sh +48 -0
  271. package/dist/skills/llm-wiki/tests/graph-html-oriental-atlas-contract.regression-1.sh +94 -0
  272. package/dist/skills/llm-wiki/tests/graph-html-oriental-design-contract.regression-1.sh +82 -0
  273. package/dist/skills/llm-wiki/tests/graph-html-search.regression-1.sh +52 -0
  274. package/dist/skills/llm-wiki/tests/graph-html-styles.regression-1.sh +66 -0
  275. package/dist/skills/llm-wiki/tests/graph-html-toolbar.regression-1.sh +62 -0
  276. package/dist/skills/llm-wiki/tests/js/graph-wash-bootstrap.test.js +110 -0
  277. package/dist/skills/llm-wiki/tests/js/graph-wash-helpers.test.js +296 -0
  278. package/dist/skills/llm-wiki/tests/js/graph-wash-learning.test.js +260 -0
  279. package/dist/skills/llm-wiki/tests/js/graph-wash-queue.test.js +115 -0
  280. package/dist/skills/llm-wiki/tests/js/graph-wash-runtime-state.test.js +282 -0
  281. package/dist/skills/llm-wiki/tests/js/source-signal-coverage.test.js +48 -0
  282. package/dist/skills/llm-wiki/tests/js/source-signal-eligibility.test.js +202 -0
  283. package/dist/skills/llm-wiki/tests/lib/graph-html-engine-helpers.sh +110 -0
  284. package/dist/skills/llm-wiki/tests/lint-output.regression-1.sh +32 -0
  285. package/dist/skills/llm-wiki/tests/regression.sh +1754 -0
  286. package/dist/skills/llm-wiki/workbench/.claude/skills/.gitkeep +0 -0
  287. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/SKILL.md +590 -0
  288. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/__init__.py +1 -0
  289. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/accept_changes.py +135 -0
  290. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/comment.py +318 -0
  291. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/helpers/__init__.py +0 -0
  292. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/helpers/merge_runs.py +199 -0
  293. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/helpers/simplify_redlines.py +197 -0
  294. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/pack.py +159 -0
  295. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  296. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  297. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  298. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  299. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  300. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  301. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  302. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  303. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  304. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  305. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  306. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  307. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  308. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  309. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  310. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  311. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  312. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  313. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  314. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  315. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  316. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  317. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  318. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  319. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  320. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  321. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  322. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  323. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  324. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  325. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  326. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/mce/mc.xsd +75 -0
  327. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-2010.xsd +560 -0
  328. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-2012.xsd +67 -0
  329. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-2018.xsd +14 -0
  330. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-cex-2018.xsd +20 -0
  331. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-cid-2016.xsd +13 -0
  332. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  333. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/schemas/microsoft/wml-symex-2015.xsd +8 -0
  334. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/soffice.py +183 -0
  335. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/unpack.py +132 -0
  336. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validate.py +111 -0
  337. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validators/__init__.py +15 -0
  338. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validators/base.py +847 -0
  339. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validators/docx.py +446 -0
  340. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validators/pptx.py +275 -0
  341. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/office/validators/redlining.py +247 -0
  342. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/templates/comments.xml +3 -0
  343. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/templates/commentsExtended.xml +3 -0
  344. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/templates/commentsExtensible.xml +3 -0
  345. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/templates/commentsIds.xml +3 -0
  346. package/dist/skills/llm-wiki/workbench/.claude/skills/docx/scripts/templates/people.xml +3 -0
  347. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/SKILL.md +314 -0
  348. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/forms.md +294 -0
  349. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/reference.md +612 -0
  350. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/check_bounding_boxes.py +65 -0
  351. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/check_fillable_fields.py +11 -0
  352. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/convert_pdf_to_images.py +33 -0
  353. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/create_validation_image.py +37 -0
  354. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/extract_form_field_info.py +122 -0
  355. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/extract_form_structure.py +115 -0
  356. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/fill_fillable_fields.py +98 -0
  357. package/dist/skills/llm-wiki/workbench/.claude/skills/pdf/scripts/fill_pdf_form_with_annotations.py +107 -0
  358. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/SKILL.md +232 -0
  359. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/editing.md +205 -0
  360. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/pptxgenjs.md +420 -0
  361. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/__init__.py +0 -0
  362. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/add_slide.py +195 -0
  363. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/clean.py +286 -0
  364. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/helpers/__init__.py +0 -0
  365. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/helpers/merge_runs.py +199 -0
  366. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/helpers/simplify_redlines.py +197 -0
  367. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/pack.py +159 -0
  368. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  369. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  370. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  371. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  372. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  373. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  374. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  375. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  376. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  377. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  378. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  379. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  380. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  381. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  382. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  383. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  384. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  385. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  386. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  387. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  388. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  389. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  390. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  391. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  392. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  393. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  394. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  395. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  396. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  397. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  398. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  399. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/mce/mc.xsd +75 -0
  400. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-2010.xsd +560 -0
  401. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-2012.xsd +67 -0
  402. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-2018.xsd +14 -0
  403. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-cex-2018.xsd +20 -0
  404. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-cid-2016.xsd +13 -0
  405. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  406. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/schemas/microsoft/wml-symex-2015.xsd +8 -0
  407. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/soffice.py +183 -0
  408. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/unpack.py +132 -0
  409. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validate.py +111 -0
  410. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validators/__init__.py +15 -0
  411. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validators/base.py +847 -0
  412. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validators/docx.py +446 -0
  413. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validators/pptx.py +275 -0
  414. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/office/validators/redlining.py +247 -0
  415. package/dist/skills/llm-wiki/workbench/.claude/skills/pptx/scripts/thumbnail.py +289 -0
  416. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/SKILL.md +292 -0
  417. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/helpers/__init__.py +0 -0
  418. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/helpers/merge_runs.py +199 -0
  419. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/helpers/simplify_redlines.py +197 -0
  420. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/pack.py +159 -0
  421. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chart.xsd +1499 -0
  422. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-chartDrawing.xsd +146 -0
  423. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-diagram.xsd +1085 -0
  424. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-lockedCanvas.xsd +11 -0
  425. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-main.xsd +3081 -0
  426. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-picture.xsd +23 -0
  427. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-spreadsheetDrawing.xsd +185 -0
  428. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/dml-wordprocessingDrawing.xsd +287 -0
  429. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/pml.xsd +1676 -0
  430. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-additionalCharacteristics.xsd +28 -0
  431. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-bibliography.xsd +144 -0
  432. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-commonSimpleTypes.xsd +174 -0
  433. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlDataProperties.xsd +25 -0
  434. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-customXmlSchemaProperties.xsd +18 -0
  435. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesCustom.xsd +59 -0
  436. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesExtended.xsd +56 -0
  437. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-documentPropertiesVariantTypes.xsd +195 -0
  438. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-math.xsd +582 -0
  439. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/shared-relationshipReference.xsd +25 -0
  440. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/sml.xsd +4439 -0
  441. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-main.xsd +570 -0
  442. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-officeDrawing.xsd +509 -0
  443. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-presentationDrawing.xsd +12 -0
  444. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-spreadsheetDrawing.xsd +108 -0
  445. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/vml-wordprocessingDrawing.xsd +96 -0
  446. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/wml.xsd +3646 -0
  447. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ISO-IEC29500-4_2016/xml.xsd +116 -0
  448. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-contentTypes.xsd +42 -0
  449. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-coreProperties.xsd +50 -0
  450. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-digSig.xsd +49 -0
  451. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/ecma/fouth-edition/opc-relationships.xsd +33 -0
  452. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/mce/mc.xsd +75 -0
  453. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-2010.xsd +560 -0
  454. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-2012.xsd +67 -0
  455. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-2018.xsd +14 -0
  456. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-cex-2018.xsd +20 -0
  457. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-cid-2016.xsd +13 -0
  458. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-sdtdatahash-2020.xsd +4 -0
  459. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/schemas/microsoft/wml-symex-2015.xsd +8 -0
  460. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/soffice.py +183 -0
  461. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/unpack.py +132 -0
  462. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validate.py +111 -0
  463. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validators/__init__.py +15 -0
  464. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validators/base.py +847 -0
  465. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validators/docx.py +446 -0
  466. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validators/pptx.py +275 -0
  467. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/office/validators/redlining.py +247 -0
  468. package/dist/skills/llm-wiki/workbench/.claude/skills/xlsx/scripts/recalc.py +184 -0
  469. package/dist/skills/llm-wiki/workbench/AGENTS.md +110 -0
  470. package/dist/skills/llm-wiki/workbench/CLAUDE.md +54 -0
  471. package/dist/skills/llm-wiki/workbench/PRODUCT.md +1268 -0
  472. package/dist/skills/llm-wiki/workbench/docs/current-kb-retrieval-design.md +587 -0
  473. package/dist/skills/llm-wiki/workbench/docs/graph-evolution-1-design.md +210 -0
  474. package/dist/skills/llm-wiki/workbench/docs/stage-2-design.md +1139 -0
  475. package/dist/skills/llm-wiki/workbench/docs/stage-3-design.md +1269 -0
  476. package/dist/skills/llm-wiki/workbench/docs/stage-3.5-design.md +1164 -0
  477. package/dist/skills/llm-wiki/workbench/docs/stage-4-design.md +504 -0
  478. package/dist/skills/llm-wiki/workbench/docs/stage-4.5-design.md +195 -0
  479. package/dist/skills/llm-wiki/workbench/docs/superpowers/specs/2026-05-28-resizable-preview-layout-design.md +165 -0
  480. package/dist/skills/llm-wiki/workbench/docs/superpowers/specs/2026-05-28-settings-panel-scroll-fix.md +50 -0
  481. package/dist/skills/llm-wiki/workbench/server/package.json +29 -0
  482. package/dist/skills/llm-wiki/workbench/server/src/agent.ts +457 -0
  483. package/dist/skills/llm-wiki/workbench/server/src/artifacts.ts +248 -0
  484. package/dist/skills/llm-wiki/workbench/server/src/auth.ts +164 -0
  485. package/dist/skills/llm-wiki/workbench/server/src/config.ts +130 -0
  486. package/dist/skills/llm-wiki/workbench/server/src/conversations.test.ts +121 -0
  487. package/dist/skills/llm-wiki/workbench/server/src/conversations.ts +255 -0
  488. package/dist/skills/llm-wiki/workbench/server/src/digest/batch.ts +189 -0
  489. package/dist/skills/llm-wiki/workbench/server/src/digest/concurrency.test.ts +36 -0
  490. package/dist/skills/llm-wiki/workbench/server/src/digest/concurrency.ts +31 -0
  491. package/dist/skills/llm-wiki/workbench/server/src/digest/subagent.ts +91 -0
  492. package/dist/skills/llm-wiki/workbench/server/src/extensions/artifacts.ts +81 -0
  493. package/dist/skills/llm-wiki/workbench/server/src/extensions/knowledge-base.ts +263 -0
  494. package/dist/skills/llm-wiki/workbench/server/src/extensions/new-wiki.ts +42 -0
  495. package/dist/skills/llm-wiki/workbench/server/src/extensions/synthesis.ts +172 -0
  496. package/dist/skills/llm-wiki/workbench/server/src/graph-watcher.test.ts +196 -0
  497. package/dist/skills/llm-wiki/workbench/server/src/graph.test.ts +84 -0
  498. package/dist/skills/llm-wiki/workbench/server/src/graph.ts +379 -0
  499. package/dist/skills/llm-wiki/workbench/server/src/index.ts +1148 -0
  500. package/dist/skills/llm-wiki/workbench/server/src/knowledge-bases.test.ts +30 -0
  501. package/dist/skills/llm-wiki/workbench/server/src/knowledge-bases.ts +321 -0
  502. package/dist/skills/llm-wiki/workbench/server/src/pages.test.ts +16 -0
  503. package/dist/skills/llm-wiki/workbench/server/src/pages.ts +158 -0
  504. package/dist/skills/llm-wiki/workbench/server/src/retrieval.test.ts +151 -0
  505. package/dist/skills/llm-wiki/workbench/server/src/retrieval.ts +427 -0
  506. package/dist/skills/llm-wiki/workbench/server/src/tool-status-events.test.ts +363 -0
  507. package/dist/skills/llm-wiki/workbench/server/src/tool-status-events.ts +616 -0
  508. package/dist/skills/llm-wiki/workbench/server/src/wiki-init.test.ts +19 -0
  509. package/dist/skills/llm-wiki/workbench/server/src/wiki-init.ts +188 -0
  510. package/dist/skills/llm-wiki/workbench/server/tsconfig.json +10 -0
  511. package/dist/skills/llm-wiki/workbench/tsconfig.json +20 -0
  512. package/dist/skills/llm-wiki/workbench/web/components.json +21 -0
  513. package/dist/skills/llm-wiki/workbench/web/eslint.config.js +22 -0
  514. package/dist/skills/llm-wiki/workbench/web/index.html +13 -0
  515. package/dist/skills/llm-wiki/workbench/web/package.json +48 -0
  516. package/dist/skills/llm-wiki/workbench/web/src/App.tsx +749 -0
  517. package/dist/skills/llm-wiki/workbench/web/src/components/AddExternalDialog.tsx +373 -0
  518. package/dist/skills/llm-wiki/workbench/web/src/components/ArtifactView.tsx +15 -0
  519. package/dist/skills/llm-wiki/workbench/web/src/components/BatchDigestPanel.tsx +106 -0
  520. package/dist/skills/llm-wiki/workbench/web/src/components/ChatPanel.tsx +821 -0
  521. package/dist/skills/llm-wiki/workbench/web/src/components/CommandMenu.tsx +65 -0
  522. package/dist/skills/llm-wiki/workbench/web/src/components/ExportButtons.tsx +54 -0
  523. package/dist/skills/llm-wiki/workbench/web/src/components/GraphPanel.tsx +516 -0
  524. package/dist/skills/llm-wiki/workbench/web/src/components/GraphReader.tsx +48 -0
  525. package/dist/skills/llm-wiki/workbench/web/src/components/GraphSelection.tsx +100 -0
  526. package/dist/skills/llm-wiki/workbench/web/src/components/MarkdownView.tsx +56 -0
  527. package/dist/skills/llm-wiki/workbench/web/src/components/NewWikiDialog.tsx +101 -0
  528. package/dist/skills/llm-wiki/workbench/web/src/components/RefMenu.tsx +40 -0
  529. package/dist/skills/llm-wiki/workbench/web/src/components/RightDrawer.tsx +227 -0
  530. package/dist/skills/llm-wiki/workbench/web/src/components/SettingsPanel.tsx +331 -0
  531. package/dist/skills/llm-wiki/workbench/web/src/components/Sidebar.tsx +436 -0
  532. package/dist/skills/llm-wiki/workbench/web/src/components/ToolHistorySummary.tsx +123 -0
  533. package/dist/skills/llm-wiki/workbench/web/src/components/ToolStatusRunway.tsx +90 -0
  534. package/dist/skills/llm-wiki/workbench/web/src/components/renderers/DownloadOnlyRenderer.tsx +88 -0
  535. package/dist/skills/llm-wiki/workbench/web/src/components/renderers/HtmlRenderer.tsx +92 -0
  536. package/dist/skills/llm-wiki/workbench/web/src/components/ui/button.tsx +52 -0
  537. package/dist/skills/llm-wiki/workbench/web/src/components/ui/command.tsx +50 -0
  538. package/dist/skills/llm-wiki/workbench/web/src/components/ui/dialog.tsx +156 -0
  539. package/dist/skills/llm-wiki/workbench/web/src/components/ui/input.tsx +21 -0
  540. package/dist/skills/llm-wiki/workbench/web/src/components/ui/tooltip.tsx +57 -0
  541. package/dist/skills/llm-wiki/workbench/web/src/index.css +1737 -0
  542. package/dist/skills/llm-wiki/workbench/web/src/lib/api.ts +648 -0
  543. package/dist/skills/llm-wiki/workbench/web/src/lib/drawer-state.ts +79 -0
  544. package/dist/skills/llm-wiki/workbench/web/src/lib/graph-reader.ts +25 -0
  545. package/dist/skills/llm-wiki/workbench/web/src/lib/graph-selection-drawer.ts +35 -0
  546. package/dist/skills/llm-wiki/workbench/web/src/lib/graph-selection.ts +96 -0
  547. package/dist/skills/llm-wiki/workbench/web/src/lib/legacy-tool-status.ts +113 -0
  548. package/dist/skills/llm-wiki/workbench/web/src/lib/sse.ts +72 -0
  549. package/dist/skills/llm-wiki/workbench/web/src/lib/tool-status-format.ts +170 -0
  550. package/dist/skills/llm-wiki/workbench/web/src/lib/tool-status-model.ts +392 -0
  551. package/dist/skills/llm-wiki/workbench/web/src/lib/utils.ts +10 -0
  552. package/dist/skills/llm-wiki/workbench/web/src/lib/wiki-links.ts +32 -0
  553. package/dist/skills/llm-wiki/workbench/web/src/main.tsx +10 -0
  554. package/dist/skills/llm-wiki/workbench/web/test/api.test.ts +61 -0
  555. package/dist/skills/llm-wiki/workbench/web/test/chat-panel-tool-status.test.tsx +26 -0
  556. package/dist/skills/llm-wiki/workbench/web/test/graph-drawer-state.test.ts +78 -0
  557. package/dist/skills/llm-wiki/workbench/web/test/graph-reader-request.test.ts +32 -0
  558. package/dist/skills/llm-wiki/workbench/web/test/graph-reader.test.ts +62 -0
  559. package/dist/skills/llm-wiki/workbench/web/test/graph-selection-drawer.test.ts +56 -0
  560. package/dist/skills/llm-wiki/workbench/web/test/graph-selection.test.ts +83 -0
  561. package/dist/skills/llm-wiki/workbench/web/test/tool-history-summary.test.tsx +124 -0
  562. package/dist/skills/llm-wiki/workbench/web/test/tool-status-format.test.ts +107 -0
  563. package/dist/skills/llm-wiki/workbench/web/test/tool-status-model.test.ts +324 -0
  564. package/dist/skills/llm-wiki/workbench/web/test/tool-status-runway.test.ts +134 -0
  565. package/dist/skills/llm-wiki/workbench/web/test/wiki-links.test.ts +23 -0
  566. package/dist/skills/llm-wiki/workbench/web/tsconfig.app.json +30 -0
  567. package/dist/skills/llm-wiki/workbench/web/tsconfig.json +7 -0
  568. package/dist/skills/llm-wiki/workbench/web/tsconfig.node.json +24 -0
  569. package/dist/skills/llm-wiki/workbench/web/vite.config.ts +26 -0
  570. package/dist/skills/mean-reviewer/SECURITY.md +23 -0
  571. package/dist/skills/mean-reviewer/SKILL.md +203 -0
  572. package/dist/skills/mean-reviewer/examples/13446_1000_Layer_Networks_for_.pdf +0 -0
  573. package/dist/skills/mean-reviewer/examples/13446_mean_reviewer.md +116 -0
  574. package/dist/skills/mean-reviewer/examples/13446_mean_reviewer_author_rebuttal_simulated.md +282 -0
  575. package/dist/skills/mean-reviewer/examples/13446_mean_reviewer_reply.md +91 -0
  576. package/dist/skills/mean-reviewer/examples/13446_official_review.json +973 -0
  577. package/dist/skills/mean-reviewer/examples/ChatGPT_AC_Roleplay.jpeg +0 -0
  578. package/dist/skills/medical-imaging-review/SKILL.md +295 -0
  579. package/dist/skills/medical-imaging-review/references/CITATION_INTEGRITY.md +233 -0
  580. package/dist/skills/medical-imaging-review/references/DOMAINS.md +302 -0
  581. package/dist/skills/medical-imaging-review/references/HALLUCINATION_PATTERNS.md +211 -0
  582. package/dist/skills/medical-imaging-review/references/MCP_SETUP.md +216 -0
  583. package/dist/skills/medical-imaging-review/references/PARADIGM.md +221 -0
  584. package/dist/skills/medical-imaging-review/references/QUALITY_CHECKLIST.md +169 -0
  585. package/dist/skills/medical-imaging-review/references/TEMPLATES.md +291 -0
  586. package/dist/skills/medical-imaging-review/references/WORKFLOW.md +289 -0
  587. package/dist/skills/mermaid-diagram/SKILL.md +379 -0
  588. package/dist/skills/meta-apply/SKILL.md +137 -0
  589. package/dist/skills/meta-optimize/SKILL.md +253 -0
  590. package/dist/skills/monitor-experiment/SKILL.md +98 -0
  591. package/dist/skills/novelty-check/SKILL.md +89 -0
  592. package/dist/skills/openalex/SKILL.md +228 -0
  593. package/dist/skills/overleaf-sync/SKILL.md +220 -0
  594. package/dist/skills/paper-claim-audit/SKILL.md +340 -0
  595. package/dist/skills/paper-compile/SKILL.md +253 -0
  596. package/dist/skills/paper-figure/SKILL.md +279 -0
  597. package/dist/skills/paper-illustration/SKILL.md +690 -0
  598. package/dist/skills/paper-illustration-image2/SKILL.md +383 -0
  599. package/dist/skills/paper-illustration-image2/scripts/paper_illustration_image2.py +255 -0
  600. package/dist/skills/paper-plan/SKILL.md +278 -0
  601. package/dist/skills/paper-poster/SKILL.md +19 -0
  602. package/dist/skills/paper-poster-html/DESIGN_FINAL.md +176 -0
  603. package/dist/skills/paper-poster-html/IMPLEMENTATION_CONVENTIONS.md +161 -0
  604. package/dist/skills/paper-poster-html/LICENSES/posterly-MIT.txt +21 -0
  605. package/dist/skills/paper-poster-html/NOTICE.md +57 -0
  606. package/dist/skills/paper-poster-html/SKILL.md +357 -0
  607. package/dist/skills/paper-poster-html/scripts/_posterly/__init__.py +0 -0
  608. package/dist/skills/paper-poster-html/scripts/_posterly/canvas.py +200 -0
  609. package/dist/skills/paper-poster-html/scripts/_posterly/measure.py +588 -0
  610. package/dist/skills/paper-poster-html/scripts/_posterly/polish.py +498 -0
  611. package/dist/skills/paper-poster-html/scripts/_posterly/preflight.py +489 -0
  612. package/dist/skills/paper-poster-html/scripts/_posterly/render.py +215 -0
  613. package/dist/skills/paper-poster-html/scripts/_posterly/textutil.py +16 -0
  614. package/dist/skills/paper-poster-html/scripts/_posterly/verify_final.py +171 -0
  615. package/dist/skills/paper-poster-html/scripts/asset_check.py +897 -0
  616. package/dist/skills/paper-poster-html/scripts/extract_pdf_figures.py +666 -0
  617. package/dist/skills/paper-poster-html/scripts/poster_check.py +251 -0
  618. package/dist/skills/paper-poster-html/scripts/preprocess_figures.py +238 -0
  619. package/dist/skills/paper-poster-html/scripts/render_preview.py +217 -0
  620. package/dist/skills/paper-poster-html/scripts/run_gates.py +556 -0
  621. package/dist/skills/paper-poster-html/scripts/style_check.py +1324 -0
  622. package/dist/skills/paper-poster-html/templates/COMPONENTS.md +462 -0
  623. package/dist/skills/paper-poster-html/templates/landscape_4col.html +1032 -0
  624. package/dist/skills/paper-poster-html/templates/landscape_hero.html +1046 -0
  625. package/dist/skills/paper-poster-html/templates/portrait_2col.html +947 -0
  626. package/dist/skills/paper-poster-html/templates/tokens/acl.json +9 -0
  627. package/dist/skills/paper-poster-html/templates/tokens/cvpr.json +9 -0
  628. package/dist/skills/paper-poster-html/templates/tokens/generic.json +9 -0
  629. package/dist/skills/paper-poster-html/templates/tokens/iclr.json +9 -0
  630. package/dist/skills/paper-poster-html/templates/tokens/icml.json +9 -0
  631. package/dist/skills/paper-poster-html/templates/tokens/neurips.json +9 -0
  632. package/dist/skills/paper-slide-deck/SKILL.md +464 -0
  633. package/dist/skills/paper-slide-deck/references/analysis-framework.md +392 -0
  634. package/dist/skills/paper-slide-deck/references/base-prompt.md +70 -0
  635. package/dist/skills/paper-slide-deck/references/content-rules.md +95 -0
  636. package/dist/skills/paper-slide-deck/references/figure-container-template.md +177 -0
  637. package/dist/skills/paper-slide-deck/references/modification-guide.md +85 -0
  638. package/dist/skills/paper-slide-deck/references/outline-template.md +437 -0
  639. package/dist/skills/paper-slide-deck/references/styles/academic-paper.md +109 -0
  640. package/dist/skills/paper-slide-deck/references/styles/blueprint.md +67 -0
  641. package/dist/skills/paper-slide-deck/references/styles/bold-editorial.md +70 -0
  642. package/dist/skills/paper-slide-deck/references/styles/chalkboard.md +68 -0
  643. package/dist/skills/paper-slide-deck/references/styles/corporate.md +69 -0
  644. package/dist/skills/paper-slide-deck/references/styles/dark-atmospheric.md +69 -0
  645. package/dist/skills/paper-slide-deck/references/styles/editorial-infographic.md +73 -0
  646. package/dist/skills/paper-slide-deck/references/styles/fantasy-animation.md +69 -0
  647. package/dist/skills/paper-slide-deck/references/styles/intuition-machine.md +72 -0
  648. package/dist/skills/paper-slide-deck/references/styles/minimal.md +64 -0
  649. package/dist/skills/paper-slide-deck/references/styles/notion.md +69 -0
  650. package/dist/skills/paper-slide-deck/references/styles/pixel-art.md +67 -0
  651. package/dist/skills/paper-slide-deck/references/styles/scientific.md +73 -0
  652. package/dist/skills/paper-slide-deck/references/styles/sketch-notes.md +66 -0
  653. package/dist/skills/paper-slide-deck/references/styles/vector-illustration.md +72 -0
  654. package/dist/skills/paper-slide-deck/references/styles/vintage.md +73 -0
  655. package/dist/skills/paper-slide-deck/references/styles/watercolor.md +68 -0
  656. package/dist/skills/paper-slide-deck/scripts/apply-template.ts +282 -0
  657. package/dist/skills/paper-slide-deck/scripts/detect-figures.ts +283 -0
  658. package/dist/skills/paper-slide-deck/scripts/extract-figure.ts +140 -0
  659. package/dist/skills/paper-slide-deck/scripts/generate-slides.py +182 -0
  660. package/dist/skills/paper-slide-deck/scripts/merge-to-pdf.ts +116 -0
  661. package/dist/skills/paper-slide-deck/scripts/merge-to-pptx.ts +137 -0
  662. package/dist/skills/paper-slide-deck/scripts/package-lock.json +899 -0
  663. package/dist/skills/paper-slide-deck/scripts/package.json +8 -0
  664. package/dist/skills/paper-slides/SKILL.md +571 -0
  665. package/dist/skills/paper-talk/SKILL.md +381 -0
  666. package/dist/skills/paper-write/SKILL.md +411 -0
  667. package/dist/skills/paper-write/templates/IEEEtran.bst +2409 -0
  668. package/dist/skills/paper-write/templates/IEEEtran.cls +6347 -0
  669. package/dist/skills/paper-write/templates/aaai2026.bst +1493 -0
  670. package/dist/skills/paper-write/templates/aaai2026.sty +315 -0
  671. package/dist/skills/paper-write/templates/aaai2026.tex +952 -0
  672. package/dist/skills/paper-write/templates/acl.sty +312 -0
  673. package/dist/skills/paper-write/templates/acl2026.tex +377 -0
  674. package/dist/skills/paper-write/templates/acl_natbib.bst +1940 -0
  675. package/dist/skills/paper-write/templates/acm.bst +3081 -0
  676. package/dist/skills/paper-write/templates/acm_mm2026.tex +204 -0
  677. package/dist/skills/paper-write/templates/acmart.cls +3520 -0
  678. package/dist/skills/paper-write/templates/cvpr.bst +1448 -0
  679. package/dist/skills/paper-write/templates/cvpr.sty +508 -0
  680. package/dist/skills/paper-write/templates/cvpr2026.tex +63 -0
  681. package/dist/skills/paper-write/templates/iclr2026.tex +84 -0
  682. package/dist/skills/paper-write/templates/iclr2026_conference.bst +1440 -0
  683. package/dist/skills/paper-write/templates/iclr2026_conference.sty +246 -0
  684. package/dist/skills/paper-write/templates/icml2025.tex +87 -0
  685. package/dist/skills/paper-write/templates/icml2026.sty +767 -0
  686. package/dist/skills/paper-write/templates/icml2026.tex +662 -0
  687. package/dist/skills/paper-write/templates/ieee_conference.tex +89 -0
  688. package/dist/skills/paper-write/templates/ieee_journal.tex +93 -0
  689. package/dist/skills/paper-write/templates/math_commands.tex +48 -0
  690. package/dist/skills/paper-write/templates/neurips2025.tex +80 -0
  691. package/dist/skills/paper-write/templates/neurips2026.tex +493 -0
  692. package/dist/skills/paper-write/templates/neurips_2026.sty +437 -0
  693. package/dist/skills/paper-writing/SKILL.md +632 -0
  694. package/dist/skills/patent-novelty-check/SKILL.md +153 -0
  695. package/dist/skills/patent-pipeline/SKILL.md +344 -0
  696. package/dist/skills/patent-review/SKILL.md +202 -0
  697. package/dist/skills/pixel-art/SKILL.md +139 -0
  698. package/dist/skills/pre-submission-reviewer/SKILL.md +247 -0
  699. package/dist/skills/pre-submission-reviewer/references/forbidden-patterns.md +163 -0
  700. package/dist/skills/pre-submission-reviewer/references/grammar-rules.md +135 -0
  701. package/dist/skills/pre-submission-reviewer/references/latex-rules.md +158 -0
  702. package/dist/skills/pre-submission-reviewer/references/logic-and-structure.md +125 -0
  703. package/dist/skills/pre-submission-reviewer/references/section-guides.md +169 -0
  704. package/dist/skills/prior-art-search/SKILL.md +146 -0
  705. package/dist/skills/proof-checker/SKILL.md +499 -0
  706. package/dist/skills/proof-writer/SKILL.md +222 -0
  707. package/dist/skills/qzcli/SKILL.md +316 -0
  708. package/dist/skills/rebuttal/SKILL.md +304 -0
  709. package/dist/skills/render-html/SKILL.md +299 -0
  710. package/dist/skills/render-html/scripts/render_html.py +905 -0
  711. package/dist/skills/render-html/scripts/templates/academic.html +342 -0
  712. package/dist/skills/render-html/scripts/templates/dashboard.html +333 -0
  713. package/dist/skills/research-lit/SKILL.md +353 -0
  714. package/dist/skills/research-paper-writing/SKILL.md +99 -0
  715. package/dist/skills/research-paper-writing/agents/openai.yaml +4 -0
  716. package/dist/skills/research-paper-writing/references/abstract.md +102 -0
  717. package/dist/skills/research-paper-writing/references/conclusion.md +35 -0
  718. package/dist/skills/research-paper-writing/references/does-my-writing-flow-source.md +45 -0
  719. package/dist/skills/research-paper-writing/references/examples/abstract/template-a.md +21 -0
  720. package/dist/skills/research-paper-writing/references/examples/abstract/template-b.md +34 -0
  721. package/dist/skills/research-paper-writing/references/examples/abstract/template-c.md +28 -0
  722. package/dist/skills/research-paper-writing/references/examples/abstract-examples.md +13 -0
  723. package/dist/skills/research-paper-writing/references/examples/index.md +21 -0
  724. package/dist/skills/research-paper-writing/references/examples/introduction/novel-task-challenge-decomposition.md +18 -0
  725. package/dist/skills/research-paper-writing/references/examples/introduction/pipeline-not-recommended-abstract-only.md +30 -0
  726. package/dist/skills/research-paper-writing/references/examples/introduction/pipeline-version-1-one-contribution-multi-advantages.md +30 -0
  727. package/dist/skills/research-paper-writing/references/examples/introduction/pipeline-version-2-two-contributions.md +34 -0
  728. package/dist/skills/research-paper-writing/references/examples/introduction/pipeline-version-3-new-module-on-existing-pipeline.md +18 -0
  729. package/dist/skills/research-paper-writing/references/examples/introduction/pipeline-version-4-observation-driven.md +16 -0
  730. package/dist/skills/research-paper-writing/references/examples/introduction/technical-challenge-version-1-existing-task.md +32 -0
  731. package/dist/skills/research-paper-writing/references/examples/introduction/technical-challenge-version-2-existing-task-insight-backed-by-traditional.md +33 -0
  732. package/dist/skills/research-paper-writing/references/examples/introduction/technical-challenge-version-3-novel-task.md +21 -0
  733. package/dist/skills/research-paper-writing/references/examples/introduction/version-1-task-then-application.md +14 -0
  734. package/dist/skills/research-paper-writing/references/examples/introduction/version-2-application-first.md +10 -0
  735. package/dist/skills/research-paper-writing/references/examples/introduction/version-3-general-to-specific-setting.md +14 -0
  736. package/dist/skills/research-paper-writing/references/examples/introduction/version-4-open-with-challenge.md +20 -0
  737. package/dist/skills/research-paper-writing/references/examples/introduction-examples.md +25 -0
  738. package/dist/skills/research-paper-writing/references/examples/method/example-of-the-three-elements.md +67 -0
  739. package/dist/skills/research-paper-writing/references/examples/method/method-writing-common-issues-note.md +10 -0
  740. package/dist/skills/research-paper-writing/references/examples/method/module-design-instant-ngp.md +55 -0
  741. package/dist/skills/research-paper-writing/references/examples/method/module-motivation-patterns.md +15 -0
  742. package/dist/skills/research-paper-writing/references/examples/method/module-triad-neural-body.md +19 -0
  743. package/dist/skills/research-paper-writing/references/examples/method/neural-body-annotated-figure-text.md +66 -0
  744. package/dist/skills/research-paper-writing/references/examples/method/overview-template.md +30 -0
  745. package/dist/skills/research-paper-writing/references/examples/method/pre-writing-questions.md +17 -0
  746. package/dist/skills/research-paper-writing/references/examples/method/section-skeleton.md +9 -0
  747. package/dist/skills/research-paper-writing/references/examples/method-examples.md +24 -0
  748. package/dist/skills/research-paper-writing/references/experiments.md +102 -0
  749. package/dist/skills/research-paper-writing/references/introduction.md +408 -0
  750. package/dist/skills/research-paper-writing/references/method.md +196 -0
  751. package/dist/skills/research-paper-writing/references/paper-review.md +86 -0
  752. package/dist/skills/research-paper-writing/references/related-work.md +41 -0
  753. package/dist/skills/research-pipeline/SKILL.md +257 -0
  754. package/dist/skills/research-proposal/SKILL.md +573 -0
  755. package/dist/skills/research-proposal/assets/proposal_scaffold_en.md +323 -0
  756. package/dist/skills/research-proposal/assets/proposal_scaffold_zh.md +346 -0
  757. package/dist/skills/research-proposal/references/DOMAIN_TEMPLATES.md +518 -0
  758. package/dist/skills/research-proposal/references/LITERATURE_WORKFLOW.md +529 -0
  759. package/dist/skills/research-proposal/references/QUALITY_CHECKLIST.md +325 -0
  760. package/dist/skills/research-proposal/references/STRUCTURE_GUIDE.md +398 -0
  761. package/dist/skills/research-proposal/references/WRITING_STYLE_GUIDE.md +661 -0
  762. package/dist/skills/research-refine/SKILL.md +716 -0
  763. package/dist/skills/research-refine-pipeline/SKILL.md +186 -0
  764. package/dist/skills/research-review/SKILL.md +119 -0
  765. package/dist/skills/research-wiki/SKILL.md +373 -0
  766. package/dist/skills/resubmit-pipeline/SKILL.md +427 -0
  767. package/dist/skills/result-to-claim/SKILL.md +190 -0
  768. package/dist/skills/run-experiment/SKILL.md +227 -0
  769. package/dist/skills/scientific-figure-making/SKILL.md +38 -0
  770. package/dist/skills/scientific-figure-making/references/api.md +152 -0
  771. package/dist/skills/scientific-figure-making/references/common-patterns.md +74 -0
  772. package/dist/skills/scientific-figure-making/references/demos.md +30 -0
  773. package/dist/skills/scientific-figure-making/references/design-theory.md +138 -0
  774. package/dist/skills/scientific-figure-making/references/tutorials.md +135 -0
  775. package/dist/skills/semantic-scholar/SKILL.md +219 -0
  776. package/dist/skills/serverless-modal/SKILL.md +324 -0
  777. package/dist/skills/slides-polish/SKILL.md +563 -0
  778. package/dist/skills/specification-writing/SKILL.md +211 -0
  779. package/dist/skills/strategist/SKILL.md +670 -0
  780. package/dist/skills/strategist/references/quality_standards.md +336 -0
  781. package/dist/skills/strategist/references/search_strategy.md +459 -0
  782. package/dist/skills/strategist/scripts/evaluate_samples.py +300 -0
  783. package/dist/skills/strategist/scripts/gap_analysis.py +399 -0
  784. package/dist/skills/system-profile/SKILL.md +103 -0
  785. package/dist/skills/tech-paper-template/SKILL.md +192 -0
  786. package/dist/skills/tech-paper-template/references/consistency-checks.md +166 -0
  787. package/dist/skills/tech-paper-template/references/paper-types.md +127 -0
  788. package/dist/skills/tech-paper-template/references/thinking-template.md +194 -0
  789. package/dist/skills/tech-paper-template/references/worked-examples.md +124 -0
  790. package/dist/skills/training-check/SKILL.md +83 -0
  791. package/dist/skills/vast-gpu/SKILL.md +380 -0
  792. package/dist/skills/vibe-research-workflow/SKILL.md +189 -0
  793. package/dist/skills/vibe-research-workflow/references/behavior-guidelines.md +149 -0
  794. package/dist/skills/vibe-research-workflow/references/tool-selection.md +144 -0
  795. package/dist/skills/vibe-research-workflow/references/vibe-coding.md +154 -0
  796. package/dist/skills/vibe-research-workflow/references/vibe-figure.md +131 -0
  797. package/dist/skills/vibe-research-workflow/references/vibe-writing.md +181 -0
  798. package/dist/skills/wiki-enrich/SKILL.md +254 -0
  799. package/dist/skills/writing-systems-papers/SKILL.md +184 -0
  800. package/package.json +1 -1
@@ -0,0 +1,629 @@
1
+ # Writing Quality Standards for Academic Papers
2
+
3
+ This document defines quality evaluation criteria for systematic academic paper writing.
4
+
5
+ ## Overview
6
+
7
+ Quality evaluation occurs at two levels:
8
+ 1. **Chapter-level quality checks** (after each chapter is written)
9
+ 2. **Final quality assessment** (before submission)
10
+
11
+ ---
12
+
13
+ ## Chapter-Level Quality Standards
14
+
15
+ ### 5-Dimension Assessment (4 points each, 20 total)
16
+
17
+ After writing each chapter, evaluate against these 5 dimensions:
18
+
19
+ #### 1. Argument Quality (1-4 points)
20
+
21
+ **4 points - Excellent**:
22
+ - Thesis/claim crystal clear
23
+ - All supporting arguments logically connected
24
+ - Premises fully justified
25
+ - No logical gaps or unsupported assertions
26
+ - Counter-arguments addressed where appropriate
27
+
28
+ **3 points - Good**:
29
+ - Clear main argument
30
+ - Most support adequate
31
+ - Minor gaps that could be strengthened
32
+ - Some premises could use more justification
33
+
34
+ **2 points - Acceptable**:
35
+ - Argument identifiable but could be clearer
36
+ - Multiple gaps in reasoning
37
+ - Several premises need justification
38
+ - Logical flow interrupted
39
+
40
+ **1 point - Needs Major Revision**:
41
+ - Unclear argument
42
+ - Major logical gaps
43
+ - Many unsupported claims
44
+ - Disjointed reasoning
45
+
46
+ #### 2. Citation Quality (1-4 points)
47
+
48
+ **4 points - Excellent**:
49
+ - All claims properly cited
50
+ - Citations accurate and relevant
51
+ - Key literature well-integrated
52
+ - Citation density appropriate for section type
53
+ - Format consistent throughout
54
+
55
+ **3 points - Good**:
56
+ - Most claims cited
57
+ - Citations generally relevant
58
+ - Minor formatting inconsistencies
59
+ - Could integrate 1-2 more key sources
60
+
61
+ **2 points - Acceptable**:
62
+ - Some claims lack citations
63
+ - Several citations not optimally relevant
64
+ - Format inconsistencies present
65
+ - Missing some key literature
66
+
67
+ **1 point - Needs Major Revision**:
68
+ - Many uncited claims
69
+ - Citations poorly integrated
70
+ - Major format issues
71
+ - Key literature missing
72
+
73
+ #### 3. Clarity & Readability (1-4 points)
74
+
75
+ **4 points - Excellent**:
76
+ - Prose clear and precise
77
+ - Technical terms defined when introduced
78
+ - Sentence structure varied and effective
79
+ - Transitions smooth between ideas
80
+ - No ambiguity in meaning
81
+
82
+ **3 points - Good**:
83
+ - Generally clear prose
84
+ - Most terms adequately explained
85
+ - Occasional awkward phrasing
86
+ - Mostly good transitions
87
+
88
+ **2 points - Acceptable**:
89
+ - Some unclear passages
90
+ - Several terms need better explanation
91
+ - Multiple awkward sentences
92
+ - Transitions need improvement
93
+
94
+ **1 point - Needs Major Revision**:
95
+ - Frequently unclear
96
+ - Many unexplained terms
97
+ - Poor sentence structure
98
+ - Weak or missing transitions
99
+
100
+ #### 4. Structure & Flow (1-4 points)
101
+
102
+ **4 points - Excellent**:
103
+ - Perfect logical progression
104
+ - Each paragraph serves clear purpose
105
+ - Subsections well-organized
106
+ - Chapter fits outline specification exactly
107
+ - Word count within ±5% of target
108
+
109
+ **3 points - Good**:
110
+ - Good overall flow
111
+ - Most paragraphs purposeful
112
+ - Organization generally clear
113
+ - Minor deviations from outline
114
+ - Word count within ±10%
115
+
116
+ **2 points - Acceptable**:
117
+ - Flow interrupted in places
118
+ - Some paragraphs unfocused
119
+ - Organization could be improved
120
+ - Notable deviations from outline
121
+ - Word count off by 11-20%
122
+
123
+ **1 point - Needs Major Revision**:
124
+ - Poor flow
125
+ - Many unfocused paragraphs
126
+ - Disorganized
127
+ - Major deviations from outline
128
+ - Word count off by >20%
129
+
130
+ #### 5. Platform Style Conformity (1-4 points)
131
+
132
+ **4 points - Excellent**:
133
+ - Perfect match to platform writing style
134
+ - Voice consistent with sample papers
135
+ - Terminology appropriate
136
+ - Format conventions followed exactly
137
+ - Citation style matches platform
138
+
139
+ **3 points - Good**:
140
+ - Good style match
141
+ - Minor voice inconsistencies
142
+ - Terminology mostly appropriate
143
+ - Format mostly correct
144
+
145
+ **2 points - Acceptable**:
146
+ - Recognizable platform style but inconsistent
147
+ - Several voice/terminology issues
148
+ - Format needs adjustment in places
149
+
150
+ **1 point - Needs Major Revision**:
151
+ - Poor style match
152
+ - Wrong voice or terminology
153
+ - Format significantly different from platform norms
154
+
155
+ ### Chapter Quality Gate
156
+
157
+ **Passing Threshold**: ≥16/20 (80%)
158
+
159
+ **If chapter scores <16/20**:
160
+ - Identify specific dimension(s) scoring <3
161
+ - Implement targeted revisions
162
+ - Re-evaluate before proceeding to next chapter
163
+
164
+ **Why This Matters**: Each chapter builds on previous ones. Low-quality chapters create cascading problems that are harder to fix later.
165
+
166
+ ---
167
+
168
+ ## Section-Specific Quality Standards
169
+
170
+ ### Abstract Quality (250-300 words)
171
+
172
+ **Required Elements**:
173
+ - ✓ Problem/puzzle statement (1-2 sentences)
174
+ - ✓ Existing approach limitations (1-2 sentences)
175
+ - ✓ This paper's contribution (2-3 sentences)
176
+ - ✓ Main argument/findings (2-3 sentences)
177
+ - ✓ Significance/implications (1-2 sentences)
178
+
179
+ **Quality Checklist**:
180
+ - [ ] Can be understood without reading paper
181
+ - [ ] No citations in abstract (platform-dependent)
182
+ - [ ] Avoids jargon or defines essential terms
183
+ - [ ] Accurately represents paper content
184
+ - [ ] Compelling to target audience
185
+
186
+ ### Introduction Quality (typically 15-20% of paper)
187
+
188
+ **Required Elements**:
189
+ - ✓ Opening puzzle/problem (hooks reader)
190
+ - ✓ Background context (enough to understand problem)
191
+ - ✓ Literature review (what's been tried, what's missing)
192
+ - ✓ This paper's approach (clear statement)
193
+ - ✓ Contribution summary (what's new)
194
+ - ✓ Roadmap (chapter-by-chapter preview)
195
+
196
+ **Quality Checklist**:
197
+ - [ ] Problem significance clearly established
198
+ - [ ] Gap in literature explicitly identified
199
+ - [ ] Originality clearly articulated
200
+ - [ ] Roadmap matches actual chapter structure
201
+ - [ ] Appropriate citation density (15-25 citations typical for philosophy)
202
+
203
+ ### Main Body Chapters (60-70% of paper)
204
+
205
+ **Quality Varies by Chapter Type**:
206
+
207
+ **Conceptual/Theoretical Chapters**:
208
+ - [ ] Key concepts clearly defined
209
+ - [ ] Distinctions drawn where needed
210
+ - [ ] Examples provided for abstract concepts
211
+ - [ ] Connections to literature explicit
212
+
213
+ **Argument Chapters**:
214
+ - [ ] Premises clearly stated
215
+ - [ ] Inference steps explicit
216
+ - [ ] Objections anticipated and addressed
217
+ - [ ] Conclusion follows logically
218
+
219
+ **Case Study/Analysis Chapters**:
220
+ - [ ] Case described in sufficient detail
221
+ - [ ] Analysis systematically applied
222
+ - [ ] Findings clearly presented
223
+ - [ ] Implications drawn
224
+
225
+ **Critical Review Chapters**:
226
+ - [ ] Target position accurately represented
227
+ - [ ] Criticism fair and well-supported
228
+ - [ ] Charitable interpretation maintained
229
+ - [ ] Alternative considered
230
+
231
+ ### Conclusion Quality (10-15% of paper)
232
+
233
+ **Required Elements**:
234
+ - ✓ Thesis restatement (in light of arguments)
235
+ - ✓ Main findings summary
236
+ - ✓ Significance reiteration (why this matters)
237
+ - ✓ Limitations acknowledgment (honest assessment)
238
+ - ✓ Future work directions (2-3 concrete suggestions)
239
+
240
+ **Quality Checklist**:
241
+ - [ ] No new information introduced
242
+ - [ ] Addresses introduction promises
243
+ - [ ] Acknowledges limitations without undermining contribution
244
+ - [ ] Future work suggestions are specific and feasible
245
+ - [ ] Strong closing statement
246
+
247
+ ---
248
+
249
+ ## Final Quality Assessment
250
+
251
+ ### 7-Dimension Evaluation (10 points each, 70 total)
252
+
253
+ Before submission, evaluate complete paper on 7 dimensions:
254
+
255
+ #### 1. Overall Argument Quality (1-10)
256
+
257
+ **9-10 - Excellent**:
258
+ - Thesis perfectly clear throughout
259
+ - All chapters contribute to central argument
260
+ - Premises fully justified
261
+ - No logical gaps
262
+ - Counter-arguments thoroughly addressed
263
+ - Conclusion strongly supported
264
+
265
+ **7-8 - Good**:
266
+ - Clear thesis
267
+ - Good chapter integration
268
+ - Minor logical gaps
269
+ - Most objections addressed
270
+
271
+ **5-6 - Acceptable**:
272
+ - Thesis identifiable but could be clearer
273
+ - Some chapter disconnects
274
+ - Several logical gaps
275
+ - Some objections unaddressed
276
+
277
+ **3-4 - Needs Revision**:
278
+ - Unclear thesis
279
+ - Poor chapter integration
280
+ - Major logical gaps
281
+
282
+ **1-2 - Major Revision Required**:
283
+ - No clear thesis
284
+ - Chapters poorly connected
285
+ - Pervasive logical problems
286
+
287
+ #### 2. Literature Integration (1-10)
288
+
289
+ **9-10 - Excellent**:
290
+ - 40-60 sources (typical for philosophy)
291
+ - All key literature covered
292
+ - Citations well-integrated
293
+ - Literature critically engaged
294
+ - Gap clearly positioned
295
+
296
+ **7-8 - Good**:
297
+ - 30-40 sources
298
+ - Most key works included
299
+ - Good integration
300
+ - Critical engagement present
301
+
302
+ **5-6 - Acceptable**:
303
+ - 20-30 sources
304
+ - Some key works missing
305
+ - Adequate integration
306
+ - Limited critical engagement
307
+
308
+ **3-4 - Needs Revision**:
309
+ - <20 sources
310
+ - Major gaps in literature
311
+ - Poor integration
312
+
313
+ **1-2 - Major Revision Required**:
314
+ - Insufficient sources
315
+ - Key literature ignored
316
+ - Citations merely decorative
317
+
318
+ #### 3. Clarity & Accessibility (1-10)
319
+
320
+ **9-10 - Excellent**:
321
+ - Consistently clear prose
322
+ - Complex ideas well-explained
323
+ - Appropriate for target audience
324
+ - No ambiguity
325
+ - Technical terms defined
326
+
327
+ **7-8 - Good**:
328
+ - Generally clear
329
+ - Most ideas accessible
330
+ - Minor unclear passages
331
+
332
+ **5-6 - Acceptable**:
333
+ - Clarity inconsistent
334
+ - Several unclear sections
335
+ - Some inaccessible passages
336
+
337
+ **3-4 - Needs Revision**:
338
+ - Frequently unclear
339
+ - Many inaccessible passages
340
+
341
+ **1-2 - Major Revision Required**:
342
+ - Pervasively unclear
343
+ - Inaccessible to target audience
344
+
345
+ #### 4. Originality & Contribution (1-10)
346
+
347
+ **9-10 - Excellent**:
348
+ - Major original contribution
349
+ - Clear advance over literature
350
+ - Significance well-established
351
+ - Multiple innovative elements
352
+
353
+ **7-8 - Good**:
354
+ - Clear original contribution
355
+ - Solid advance over literature
356
+ - Significance demonstrated
357
+
358
+ **5-6 - Acceptable**:
359
+ - Identifiable contribution
360
+ - Incremental advance
361
+ - Significance could be stronger
362
+
363
+ **3-4 - Needs Revision**:
364
+ - Unclear contribution
365
+ - Minimal advance
366
+
367
+ **1-2 - Major Revision Required**:
368
+ - No clear contribution
369
+ - Replicates existing work
370
+
371
+ #### 5. Methodological Rigor (1-10)
372
+
373
+ **9-10 - Excellent**:
374
+ - Method explicitly stated and justified
375
+ - Consistently applied
376
+ - Appropriate for research question
377
+ - Limitations acknowledged
378
+ - Alternative methods considered
379
+
380
+ **7-8 - Good**:
381
+ - Method clear and appropriate
382
+ - Generally consistent application
383
+ - Limitations noted
384
+
385
+ **5-6 - Acceptable**:
386
+ - Method identifiable
387
+ - Some inconsistency
388
+ - Limitations minimally addressed
389
+
390
+ **3-4 - Needs Revision**:
391
+ - Method unclear
392
+ - Inconsistent application
393
+
394
+ **1-2 - Major Revision Required**:
395
+ - No clear method
396
+ - Inappropriate approach
397
+
398
+ #### 6. Structure & Organization (1-10)
399
+
400
+ **9-10 - Excellent**:
401
+ - Perfect logical flow
402
+ - Optimal chapter organization
403
+ - Proportions balanced
404
+ - Transitions seamless
405
+ - Roadmap followed exactly
406
+
407
+ **7-8 - Good**:
408
+ - Good flow
409
+ - Sensible organization
410
+ - Proportions generally balanced
411
+ - Good transitions
412
+
413
+ **5-6 - Acceptable**:
414
+ - Flow adequate
415
+ - Organization acceptable
416
+ - Some proportion issues
417
+ - Transitions need work
418
+
419
+ **3-4 - Needs Revision**:
420
+ - Poor flow
421
+ - Questionable organization
422
+ - Imbalanced proportions
423
+
424
+ **1-2 - Major Revision Required**:
425
+ - No clear flow
426
+ - Disorganized
427
+ - Severely imbalanced
428
+
429
+ #### 7. Platform & Style Conformity (1-10)
430
+
431
+ **9-10 - Excellent**:
432
+ - Perfect platform style match
433
+ - Format exactly correct
434
+ - Voice consistent throughout
435
+ - Citation format perfect
436
+ - Length optimal
437
+
438
+ **7-8 - Good**:
439
+ - Good style match
440
+ - Format mostly correct
441
+ - Voice generally consistent
442
+ - Minor format issues
443
+
444
+ **5-6 - Acceptable**:
445
+ - Recognizable platform style
446
+ - Format needs adjustment
447
+ - Voice inconsistencies
448
+
449
+ **3-4 - Needs Revision**:
450
+ - Poor style match
451
+ - Format problems
452
+
453
+ **1-2 - Major Revision Required**:
454
+ - Wrong platform style
455
+ - Format significantly incorrect
456
+
457
+ ### Final Quality Gate
458
+
459
+ **Passing Threshold**: ≥56/70 (80%)
460
+
461
+ **Score Interpretation**:
462
+ - 63-70 (90-100%): Excellent, ready for submission
463
+ - 56-62 (80-89%): Good, minor revisions recommended
464
+ - 49-55 (70-79%): Acceptable, moderate revisions needed
465
+ - <49 (<70%): Major revisions required
466
+
467
+ ---
468
+
469
+ ## Content Completeness Checklist
470
+
471
+ Before final submission, verify all required elements present:
472
+
473
+ ### Structural Completeness
474
+ - [ ] Abstract (250-300 words)
475
+ - [ ] Introduction with all required elements
476
+ - [ ] All outlined main chapters present
477
+ - [ ] Conclusion with all required elements
478
+ - [ ] References section formatted correctly
479
+
480
+ ### Content Completeness
481
+ - [ ] All promises from introduction fulfilled
482
+ - [ ] All claims supported by evidence or argument
483
+ - [ ] All technical terms defined
484
+ - [ ] All objections addressed
485
+ - [ ] All limitations acknowledged
486
+
487
+ ### Citation Completeness
488
+ - [ ] Every citation in text has bibliography entry
489
+ - [ ] Every bibliography entry is cited in text
490
+ - [ ] Citation format consistent throughout
491
+ - [ ] All citations include necessary information (author, year, page if direct quote)
492
+
493
+ ### Format Completeness
494
+ - [ ] Title page (if required by platform)
495
+ - [ ] Section numbering consistent
496
+ - [ ] Heading hierarchy logical
497
+ - [ ] Figure/table captions (if applicable)
498
+ - [ ] Appendices (if needed)
499
+
500
+ ### Submission Checklist (Platform-Specific)
501
+
502
+ **PhilArchive/PhilPapers**:
503
+ - [ ] PDF format
504
+ - [ ] Abstract <500 words
505
+ - [ ] Proper metadata (title, keywords, AMS classification)
506
+ - [ ] Author information complete
507
+
508
+ **arXiv**:
509
+ - [ ] LaTeX or PDF format
510
+ - [ ] Abstract <1920 characters
511
+ - [ ] Proper category selection (cs.AI, q-bio.NC, etc.)
512
+ - [ ] No embedded fonts issues
513
+
514
+ **PhilSci-Archive**:
515
+ - [ ] PDF format
516
+ - [ ] Proper subject classification
517
+ - [ ] Keywords provided
518
+ - [ ] No copywritten material without permission
519
+
520
+ ---
521
+
522
+ ## Common Quality Issues and Fixes
523
+
524
+ ### Issue 1: Argument Gaps
525
+
526
+ **Symptom**: Chapter scores low on "Argument Quality"
527
+ **Diagnosis**: Logical leaps, unsupported premises, or missing steps
528
+ **Fix**:
529
+ 1. Identify specific gap (which premise or inference?)
530
+ 2. Add explicit justification for that step
531
+ 3. Consider if additional sub-argument needed
532
+ 4. Re-evaluate argument flow
533
+
534
+ ### Issue 2: Insufficient Citations
535
+
536
+ **Symptom**: Chapter scores low on "Citation Quality"
537
+ **Diagnosis**: Claims without support, missing key literature
538
+ **Fix**:
539
+ 1. Review each paragraph - which claims need citations?
540
+ 2. Search for supporting literature for uncited claims
541
+ 3. Check if key works from literature review are actually cited
542
+ 4. Aim for 10-15 citations per 1000 words (adjust by field)
543
+
544
+ ### Issue 3: Unclear Prose
545
+
546
+ **Symptom**: Chapter scores low on "Clarity & Readability"
547
+ **Diagnosis**: Complex sentences, undefined terms, weak transitions
548
+ **Fix**:
549
+ 1. Break complex sentences into simpler ones
550
+ 2. Add definitions for technical terms at first use
551
+ 3. Add transition sentences between paragraphs
552
+ 4. Read aloud to identify awkward phrasing
553
+
554
+ ### Issue 4: Structural Problems
555
+
556
+ **Symptom**: Chapter scores low on "Structure & Flow"
557
+ **Diagnosis**: Poor organization, wrong proportions, deviates from outline
558
+ **Fix**:
559
+ 1. Create reverse outline (what does each paragraph actually do?)
560
+ 2. Reorganize paragraphs for better flow
561
+ 3. Cut or expand sections to match target proportions
562
+ 4. Ensure chapter follows outline specification
563
+
564
+ ### Issue 5: Style Mismatch
565
+
566
+ **Symptom**: Chapter scores low on "Platform Style Conformity"
567
+ **Diagnosis**: Wrong voice, inappropriate terminology, format issues
568
+ **Fix**:
569
+ 1. Review platform writing standards guide
570
+ 2. Check sample papers for voice and terminology
571
+ 3. Adjust sentence structure to match platform norms
572
+ 4. Verify citation format matches platform requirements
573
+
574
+ ---
575
+
576
+ ## Quality Improvement Strategies
577
+
578
+ ### Strategy 1: Iterative Refinement
579
+
580
+ For chapters scoring 14-15/20:
581
+ - Identify the single lowest-scoring dimension
582
+ - Focus revision effort on that dimension only
583
+ - Re-evaluate
584
+ - If still <16/20, address next-lowest dimension
585
+
586
+ ### Strategy 2: Peer Review Simulation
587
+
588
+ After writing each chapter:
589
+ 1. Read as if you're a skeptical reviewer
590
+ 2. List every question or objection that arises
591
+ 3. Address each in revision
592
+ 4. Re-evaluate
593
+
594
+ ### Strategy 3: Cross-Chapter Coherence
595
+
596
+ After completing all main chapters:
597
+ 1. Create concept map across chapters
598
+ 2. Verify terminology consistent throughout
599
+ 3. Check that chapter N builds on chapter N-1
600
+ 4. Ensure conclusion addresses introduction promises
601
+
602
+ ### Strategy 4: Platform Benchmarking
603
+
604
+ Before final evaluation:
605
+ 1. Re-read 2-3 sample papers from target platform
606
+ 2. Note their structural and stylistic patterns
607
+ 3. Compare your paper to these patterns
608
+ 4. Adjust to match where needed
609
+
610
+ ---
611
+
612
+ ## Summary
613
+
614
+ **Chapter-Level Quality**:
615
+ - 5 dimensions, 4 points each (20 total)
616
+ - Passing threshold: ≥16/20 (80%)
617
+ - Evaluate after each chapter before proceeding
618
+
619
+ **Final Quality**:
620
+ - 7 dimensions, 10 points each (70 total)
621
+ - Passing threshold: ≥56/70 (80%)
622
+ - Evaluate complete paper before submission
623
+
624
+ **Iterative Improvement**:
625
+ - Low-scoring chapters must be revised before proceeding
626
+ - Final paper must meet threshold before submission
627
+ - Use targeted revision strategies for specific issues
628
+
629
+ This ensures systematic quality control throughout the writing process.