@rcsb/rcsb-saguaro-app 6.3.2 → 6.3.4

package/lib/RcsbFvWeb/RcsbFvBuilder.js

@@ -1,78 +0,0 @@
-import { RcsbFvCoreBuilder } from "./RcsbFvBuilder/RcsbFvCoreBuilder";
-import { RcsbFvChromosomeBuilder } from "./RcsbFvBuilder/RcsbFvChromosomeBuilder";
-import { RcsbFvPairwiseAligmentBuilder } from "./RcsbFvBuilder/RcsbFvPairwiseAligmentBuilder";
-import { RcsbFvUniprotBuilder } from "./RcsbFvBuilder/RcsbFvUniprotBuilder";
-import { RcsbFvEntityBuilder } from "./RcsbFvBuilder/RcsbFvEntityBuilder";
-import { RcsbFvInstanceBuilder } from "./RcsbFvBuilder/RcsbFvInstanceBuilder";
-import { RcsbFvProteinSequenceBuilder } from "./RcsbFvBuilder/RcsbFvProteinSequenceBuilder";
-import { RcsbFvAssemblyBuilder } from "./RcsbFvBuilder/RcsbFvAssemblyBuilder";
-import { GroupProvenanceId } from "@rcsb/rcsb-api-tools/build/RcsbDw/Types/DwEnums";
-import { RcsbFvGroupTabsBuilder } from "./RcsbFvGroup/RcsbFvGroupTabsBuilder";
-import { RcsbFvGroupAlignmentBuilder } from "./RcsbFvBuilder/RcsbFvGroupAlignmentBuilder";
-import { RcsbFvDataProviderBuilder } from "./RcsbFvBuilder/RcsbFvDataProviderBuilder";
-export function unmount(elementId) {
-    RcsbFvCoreBuilder.unmount(elementId);
-}
-export function buildMultipleAlignmentSequenceFv(elementFvId, elementSelectId, upAcc, config = {}, additionalConfig) {
-    return RcsbFvUniprotBuilder.buildUniprotMultipleEntitySequenceFv(elementFvId, elementSelectId, upAcc, config, additionalConfig);
-}
-export function buildEntitySummaryFv(elementFvId, elementSelectId, entityId, additionalConfig) {
-    return RcsbFvEntityBuilder.buildEntitySummaryFv(elementFvId, elementSelectId, entityId);
-}
-export function buildSingleEntitySummaryFv(elementId, entityId) {
-    return RcsbFvEntityBuilder.buildSingleEntitySummaryFv(elementId, entityId);
-}
-export function buildInstanceSequenceFv(elementFvId, elementSelectId, entryId, config = {}, additionalConfig) {
-    return RcsbFvInstanceBuilder.buildInstanceSequenceFv(elementFvId, elementSelectId, entryId, config, additionalConfig);
-}
-export function buildMultipleInstanceSequenceFv(elementFvId, elementEntrySelectId, elementInstanceSelectId, entryIdList, config = {}, additionalConfig) {
-    return RcsbFvInstanceBuilder.buildMultipleInstanceSequenceFv(elementFvId, elementEntrySelectId, elementInstanceSelectId, entryIdList, config, additionalConfig);
-}
-export function buildAssemblySequenceFv(elementFvId, elementSelectAssemblyId, elementSelectInstanceId, entryId, onAsseblyChangeCallback, onInstanceChangeCallback) {
-    return RcsbFvAssemblyBuilder.buildAssemblySequenceFv(elementFvId, elementSelectAssemblyId, elementSelectInstanceId, entryId, onAsseblyChangeCallback, onInstanceChangeCallback);
-}
-export function buildUniprotFv(elementId, upAcc, additionalConfig) {
-    return RcsbFvUniprotBuilder.buildUniprotFv(elementId, upAcc, additionalConfig);
-}
-export function buildEntityFv(elementId, entityId, additionalConfig) {
-    return RcsbFvEntityBuilder.buildEntityFv(elementId, entityId, additionalConfig);
-}
-export function buildInstanceFv(elementId, instanceId, additionalConfig) {
-    return RcsbFvInstanceBuilder.buildInstanceFv(elementId, instanceId, additionalConfig);
-}
-export function buildUniprotEntityFv(elementId, upAcc, entityId, additionalConfig) {
-    return RcsbFvUniprotBuilder.buildUniprotEntityFv(elementId, upAcc, entityId, additionalConfig);
-}
-export function buildUniprotEntityInstanceFv(elementId, upAcc, entityId, instanceId, additionalConfig) {
-    return RcsbFvUniprotBuilder.buildUniprotEntityInstanceFv(elementId, upAcc, entityId, instanceId, additionalConfig);
-}
-export function buildPfv(elementId, config) {
-    return RcsbFvProteinSequenceBuilder.buildPfv(elementId, config);
-}
-export function buildPairwiseAlignment(elementId, psa, additionalConfig) {
-    return RcsbFvPairwiseAligmentBuilder.buildPairwiseAlignment(elementId, psa, additionalConfig);
-}
-export function buildFullChromosome(elementFvId, chrId) {
-    return RcsbFvChromosomeBuilder.buildFullChromosome(elementFvId, chrId);
-}
-export function buildEntryChromosome(elementFvId, entitySelectId, chromosomeSelectId, entryId) {
-    return RcsbFvChromosomeBuilder.buildEntryChromosome(elementFvId, entitySelectId, chromosomeSelectId, entryId);
-}
-export function buildEntityChromosome(elementFvId, elementSelectId, entityId) {
-    return RcsbFvChromosomeBuilder.buildEntityChromosome(elementFvId, elementSelectId, entityId);
-}
-export function buildChromosome(elementFvId, entityId, chrId, elementSelectId) {
-    return RcsbFvChromosomeBuilder.buildChromosome(elementFvId, chrId, elementSelectId);
-}
-export function buildGroupFv(elementId, groupProvenanceId, groupId, query, additionalConfig) {
-    RcsbFvGroupTabsBuilder.buildGroupTabs(elementId, groupProvenanceId, groupId, query, additionalConfig);
-}
-export function buildSequenceIdentityAlignmentFv(elementId, groupId, query, additionalConfig) {
-    return RcsbFvGroupAlignmentBuilder.buildGroupAlignmentFv(elementId, GroupProvenanceId.ProvenanceSequenceIdentity, groupId, query, additionalConfig);
-}
-export function buildUniprotAlignmentFv(elementId, upAcc, query, additionalConfig) {
-    return RcsbFvGroupAlignmentBuilder.buildGroupAlignmentFv(elementId, GroupProvenanceId.ProvenanceMatchingUniprotAccession, upAcc, query, additionalConfig);
-}
-export function buildDataProviderFv(elementId, dataProvider, additionalConfig) {
-    return RcsbFvDataProviderBuilder.buildFv(elementId, Object.assign(Object.assign({}, additionalConfig), { dataProvider: Object.assign({}, dataProvider) }));
-}

package/lib/RcsbFvWeb/RcsbFvComponents/ComponentsManager.d.ts

@@ -1,22 +0,0 @@
-import { GroupedOptionsInterface, SelectOptionInterface, SelectOptionProps } from "./SelectButton";
-export interface SelectButtonConfigInterface {
-    addTitle?: boolean;
-    defaultValue?: string | undefined | null;
-    width?: number;
-    dropdownTitle?: string;
-    optionProps?: (props: SelectOptionProps) => JSX.Element;
-    isAdditionalButton?: boolean;
-}
-export declare class ComponentsManager {
-    private static readonly loaderSpinner;
-    private static readonly selectButtonMap;
-    private static readonly nodeMap;
-    static buildSelectButton(elementId: string, options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
-    static addSelectButton(elementId: string, options: Array<SelectOptionInterface>, config?: SelectButtonConfigInterface): void;
-    static clearSelectButton(elementId: string): void;
-    static clearAdditionalSelectButton(elementId: string): void;
-    static buildLoaderSpinner(elementId: string): void;
-    static unmountLoaderSpinner(elementId: string): void;
-    private static hideElement;
-    private static showElement;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/ComponentsManager.js

@@ -1,63 +0,0 @@
-import { jsx as _jsx } from "react/jsx-runtime";
-import { LoaderSpinner } from "./LoaderSpinner";
-import { createRoot } from "react-dom/client";
-import { SelectButtonManager } from "./SelectButtonManager";
-export class ComponentsManager {
-    static buildSelectButton(elementId, options, config) {
-        var _a;
-        ComponentsManager.selectButtonMap.set(elementId, new SelectButtonManager(elementId));
-        (_a = ComponentsManager.selectButtonMap.get(elementId)) === null || _a === void 0 ? void 0 : _a.createButton(options, config);
-    }
-    static addSelectButton(elementId, options, config) {
-        var _a;
-        (_a = ComponentsManager.selectButtonMap.get(elementId)) === null || _a === void 0 ? void 0 : _a.addButton(options, config);
-    }
-    static clearSelectButton(elementId) {
-        var _a;
-        if (ComponentsManager.selectButtonMap.has(elementId)) {
-            (_a = ComponentsManager.selectButtonMap.get(elementId)) === null || _a === void 0 ? void 0 : _a.unmountButton();
-            ComponentsManager.selectButtonMap.delete(elementId);
-        }
-    }
-    static clearAdditionalSelectButton(elementId) {
-        var _a;
-        (_a = ComponentsManager.selectButtonMap.get(elementId)) === null || _a === void 0 ? void 0 : _a.unmountAdditionalButton();
-    }
-    static buildLoaderSpinner(elementId) {
-        var _a, _b;
-        const id = elementId + ComponentsManager.loaderSpinner;
-        if (!ComponentsManager.nodeMap.has(id)) {
-            ComponentsManager.hideElement(elementId);
-            const div = document.createElement("div");
-            div.setAttribute("id", id);
-            (_a = document.getElementById(elementId)) === null || _a === void 0 ? void 0 : _a.prepend(div);
-            ComponentsManager.nodeMap.set(id, { reactRoot: createRoot(div), htmlElement: div });
-            (_b = ComponentsManager.nodeMap.get(id)) === null || _b === void 0 ? void 0 : _b.reactRoot.render(_jsx(LoaderSpinner, {}));
-        }
-    }
-    static unmountLoaderSpinner(elementId) {
-        var _a, _b;
-        const id = elementId + ComponentsManager.loaderSpinner;
-        if (ComponentsManager.nodeMap.has(id)) {
-            (_a = ComponentsManager.nodeMap.get(id)) === null || _a === void 0 ? void 0 : _a.reactRoot.unmount();
-            (_b = ComponentsManager.nodeMap.get(id)) === null || _b === void 0 ? void 0 : _b.htmlElement.remove();
-            ComponentsManager.nodeMap.delete(id);
-            ComponentsManager.showElement(elementId);
-        }
-    }
-    static hideElement(elementId) {
-        var _a, _b, _c;
-        for (let i = 0; i < ((_b = (_a = document.getElementById(elementId)) === null || _a === void 0 ? void 0 : _a.children.length) !== null && _b !== void 0 ? _b : 0); i++) {
-            ((_c = document.getElementById(elementId)) === null || _c === void 0 ? void 0 : _c.children.item(i)).style.visibility = "hidden";
-        }
-    }
-    static showElement(elementId) {
-        var _a, _b, _c;
-        for (let i = 0; i < ((_b = (_a = document.getElementById(elementId)) === null || _a === void 0 ? void 0 : _a.children.length) !== null && _b !== void 0 ? _b : 0); i++) {
-            ((_c = document.getElementById(elementId)) === null || _c === void 0 ? void 0 : _c.children.item(i)).style.visibility = "visible";
-        }
-    }
-}
-ComponentsManager.loaderSpinner = "_loaderSpinner";
-ComponentsManager.selectButtonMap = new Map();
-ComponentsManager.nodeMap = new Map();

package/lib/RcsbFvWeb/RcsbFvComponents/LoaderSpinner.d.ts

@@ -1,4 +0,0 @@
-import React from "react";
-export declare class LoaderSpinner extends React.Component<{}, {}> {
-    render(): JSX.Element;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/LoaderSpinner.js

@@ -1,8 +0,0 @@
-import { jsx as _jsx } from "react/jsx-runtime";
-import React from "react";
-import * as classes from "../../scss/load-spinner.scss";
-export class LoaderSpinner extends React.Component {
-    render() {
-        return (_jsx("div", { style: { position: "absolute", left: 0, right: 0, marginLeft: "auto", zIndex: Number.MAX_SAFE_INTEGER, marginRight: "auto" }, children: _jsx("div", { className: classes.loadSpinnerComponentScope, children: _jsx("div", { className: "loader" }) }) }));
-    }
-}

package/lib/RcsbFvWeb/RcsbFvComponents/MountableComponent.d.ts

@@ -1,8 +0,0 @@
-import { ReactNode } from "react";
-export declare class MountableComponent {
-    private static readonly ROOT;
-    private root;
-    constructor(element: HTMLElement);
-    render(node: ReactNode): void;
-    unmount(): void;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/MountableComponent.js

@@ -1,19 +0,0 @@
-import { createRoot } from "react-dom/client";
-export class MountableComponent {
-    constructor(element) {
-        var _a;
-        if (MountableComponent.ROOT.has(element.id)) {
-            (_a = MountableComponent.ROOT.get(element.id)) === null || _a === void 0 ? void 0 : _a.unmount();
-        }
-        this.root = createRoot(element);
-        MountableComponent.ROOT.set(element.id, this.root);
-    }
-    render(node) {
-        this.unmount();
-        this.root.render(node);
-    }
-    unmount() {
-        this.root.render(undefined);
-    }
-}
-MountableComponent.ROOT = new Map();

package/lib/RcsbFvWeb/RcsbFvComponents/RcsbTabs.d.ts

@@ -1,19 +0,0 @@
-import React from "react";
-export interface RcsbTabsInterface<T extends string> {
-    tabList: Array<{
-        key: T;
-        title: string;
-        additionalComponent?: JSX.Element;
-    }>;
-    default: T;
-    id: string;
-    onSelect(t: T): void;
-    onMount(t: T): void;
-}
-export declare class RcsbTabs<T extends string> extends React.Component<RcsbTabsInterface<T>, {}> {
-    static readonly UI_SUFFIX: string;
-    static readonly SELECT_SUFFIX: string;
-    constructor(props: RcsbTabsInterface<T>);
-    render(): JSX.Element;
-    componentDidMount(): void;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/RcsbTabs.js

@@ -1,20 +0,0 @@
-import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
-import React from "react";
-import { Tab, Tabs } from "react-bootstrap";
-import * as classes from "../../scss/bootstrap-fv-display.module.scss";
-import uniqid from "uniqid";
-export class RcsbTabs extends React.Component {
-    constructor(props) {
-        super(props);
-    }
-    render() {
-        return (_jsx("div", { className: classes.bootstrapFvComponentScope, children: _jsx(Tabs, { id: this.props.id, defaultActiveKey: this.props.default, onSelect: (eventKey) => {
-                    this.props.onSelect(eventKey);
-                }, children: this.props.tabList.map((tab, n) => (_jsxs(Tab, { eventKey: tab.key, title: tab.title, children: [tab.additionalComponent, _jsx("div", { id: tab.key + RcsbTabs.UI_SUFFIX, style: { height: 20 } }), _jsx("div", { id: tab.key })] }, uniqid(`${tab.key}_`)))) }) }));
-    }
-    componentDidMount() {
-        this.props.onMount(this.props.default);
-    }
-}
-RcsbTabs.UI_SUFFIX = "_" + uniqid() + "_UI_DIV";
-RcsbTabs.SELECT_SUFFIX = "_" + uniqid() + "_SELECT_DIV";

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButton.d.ts

@@ -1,54 +0,0 @@
-import React from "react";
-import { OptionProps } from "react-select";
-export interface GroupedOptionsInterface {
-    options: Array<SelectOptionInterface>;
-    label: string;
-}
-export type SelectOptionProps = OptionProps<OptionPropsInterface, false, GroupOptionPropsInterface>;
-interface SelectButtonInterface {
-    elementId: string;
-    options?: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>;
-    addTitle: boolean;
-    renderTitle: (title: string) => void;
-    defaultValue?: string | undefined | null;
-    width?: number;
-    dropdownTitle?: string;
-    optionProps?: (props: SelectOptionProps) => JSX.Element;
-    isAdditionalButton?: boolean;
-}
-export interface SelectOptionInterface {
-    optId?: string;
-    groupLabel?: string;
-    name?: string;
-    shortLabel?: string;
-    label: string;
-    onChange: () => void;
-}
-export interface OptionPropsInterface extends SelectOptionInterface {
-    value: number;
-}
-export interface GroupOptionPropsInterface {
-    label: string;
-    options: OptionPropsInterface[];
-}
-interface SelectButtonState {
-    selectedOption: OptionPropsInterface;
-}
-export declare class SelectButton extends React.Component<SelectButtonInterface, SelectButtonState> {
-    private static readonly BUTTON_CONTAINER_DIV_SUFFIX;
-    private defaultValue;
-    private currentOption;
-    readonly state: SelectButtonState;
-    constructor(props: SelectButtonInterface);
-    private change;
-    componentDidUpdate(prevProps: Readonly<SelectButtonInterface>, prevState: Readonly<SelectButtonState>): void;
-    componentDidMount(): void;
-    render(): JSX.Element;
-    private selectRender;
-    private selectButtonRender;
-    private innerSelectButtonRender;
-    private configStyle;
-    private getSelectOpt;
-    private renderTitle;
-}
-export {};

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButton.js

@@ -1,116 +0,0 @@
-import { jsx as _jsx, Fragment as _Fragment, jsxs as _jsxs } from "react/jsx-runtime";
-import React from "react";
-import Select, { components } from 'react-select';
-import { Assertions } from "../../RcsbUtils/Helpers/Assertions";
-var assertDefined = Assertions.assertDefined;
-export class SelectButton extends React.Component {
-    constructor(props) {
-        super(props);
-        this.state = {
-            selectedOption: (this.props.options[0].options) == null ? Object.assign(Object.assign({}, (this.props.options[0])), { value: 0 }) : Object.assign(Object.assign({}, (this.props.options[0].options[0])), { value: 0 })
-        };
-        this.defaultValue = props.defaultValue;
-    }
-    change(option) {
-        this.setState({ selectedOption: option });
-    }
-    componentDidUpdate(prevProps, prevState) {
-        this.renderTitle();
-        this.state.selectedOption.onChange();
-    }
-    componentDidMount() {
-        this.renderTitle();
-        this.defaultValue = null;
-    }
-    render() {
-        return (_jsx("div", { children: this.selectRender() }));
-    }
-    selectRender() {
-        this.currentOption = this.getSelectOpt();
-        return (_jsx("div", { children: _jsx("div", { style: { display: "inline-block" }, children: this.selectButtonRender(this.currentOption.selectOpt, this.currentOption.index) }) }));
-    }
-    selectButtonRender(defaultValue, index) {
-        return (_jsx("div", { id: this.props.elementId + SelectButton.BUTTON_CONTAINER_DIV_SUFFIX, children: this.innerSelectButtonRender(defaultValue, index) }));
-    }
-    innerSelectButtonRender(defaultValue, index) {
-        const SingleValue = (props) => {
-            const label = typeof props.data.shortLabel === "string" ? props.data.shortLabel : props.data.label;
-            return (_jsx(components.SingleValue, Object.assign({}, props, { children: label })));
-        };
-        let options;
-        if (this.props.options[0].options == null) {
-            options = this.props.options.map((opt, index) => {
-                const props = Object.assign(Object.assign({}, opt), { value: index });
-                return props;
-            });
-        }
-        else {
-            let i = 0;
-            options = this.props.options.map((group, n) => ({
-                label: group.label,
-                options: group.options.map(opt => (Object.assign(Object.assign({}, opt), { value: i++ })))
-            }));
-        }
-        const title = typeof this.props.dropdownTitle === "string" ? _jsx("div", { style: { color: "grey", fontWeight: "bold", fontSize: 12 }, children: this.props.dropdownTitle }) : _jsx(_Fragment, {});
-        return (_jsxs("div", { style: { display: "inline-block" }, children: [title, _jsx("div", { children: _jsx(Select, { options: options, isSearchable: false, onChange: this.change.bind(this), styles: this.configStyle(), components: { SingleValue, Option: this.props.optionProps ? (props) => {
-                                var _a, _b, _c;
-                                return (_c = (_b = (_a = this.props).optionProps) === null || _b === void 0 ? void 0 : _b.call(_a, Object.assign(Object.assign({}, props), { children: _jsx(components.Option, Object.assign({}, props, { children: props.children })) }))) !== null && _c !== void 0 ? _c : _jsx(_Fragment, {});
-                            } : ((props) => (_jsx(components.Option, Object.assign({}, props, { children: props.children })))) }, defaultValue: Object.assign(Object.assign({}, defaultValue), { value: index }) }) })] }));
-    }
-    configStyle() {
-        return {
-            control: (base) => {
-                var _a;
-                return (Object.assign(Object.assign({}, base), { width: (_a = this.props.width) !== null && _a !== void 0 ? _a : 120, border: '1px solid #ddd', boxShadow: 'none', '&:hover': {
-                        border: '1px solid #ddd',
-                    } }));
-            },
-            menu: (base) => (Object.assign(Object.assign({}, base), { width: 500 })),
-            option: (base) => (Object.assign({}, base))
-        };
-    }
-    getSelectOpt() {
-        let index = 0;
-        let selectOpt = undefined;
-        if (this.defaultValue != null) {
-            if (this.props.options[0].options == null) {
-                const n = this.props.options.findIndex(a => {
-                    return a.optId === this.defaultValue;
-                });
-                if (n >= 0) {
-                    index = n;
-                    selectOpt = this.props.options[n];
-                }
-            }
-            else if (this.props.options[0].options != null) {
-                let flag = false;
-                for (const group of this.props.options) {
-                    for (const opt of group.options) {
-                        if (opt.optId === this.defaultValue) {
-                            selectOpt = opt;
-                            flag = true;
-                            break;
-                        }
-                        index++;
-                    }
-                    if (flag) {
-                        break;
-                    }
-                }
-            }
-        }
-        else {
-            selectOpt = this.state.selectedOption;
-            index = this.props.options.findIndex(a => {
-                return a.optId === this.state.selectedOption.optId;
-            });
-        }
-        assertDefined(selectOpt);
-        return { selectOpt: selectOpt, index: index };
-    }
-    renderTitle() {
-        if (this.props.addTitle && this.currentOption.selectOpt.name)
-            this.props.renderTitle(this.currentOption.selectOpt.name);
-    }
-}
-SelectButton.BUTTON_CONTAINER_DIV_SUFFIX = "_buttonContainerDiv";

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonManager.d.ts

@@ -1,17 +0,0 @@
-import { GroupedOptionsInterface, SelectOptionInterface } from "./SelectButton";
-import { SelectButtonConfigInterface } from "./ComponentsManager";
-export declare class SelectButtonManager {
-    private readonly elementId;
-    private static readonly MAIN_BUTTON_SUFFIX;
-    private static readonly ADDITIONAL_BUTTON_SUFFIX;
-    private static readonly SELECT_TITLE_DIV;
-    private readonly selectComponent;
-    constructor(elementId: string);
-    createButton(options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
-    addButton(options: Array<SelectOptionInterface> | Array<GroupedOptionsInterface>, config?: SelectButtonConfigInterface): void;
-    unmountButton(): void;
-    unmountAdditionalButton(): void;
-    private button;
-    private renderTitle;
-    private createDiv;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonManager.js

@@ -1,54 +0,0 @@
-import { jsx as _jsx } from "react/jsx-runtime";
-import { SelectButton } from "./SelectButton";
-import { SelectButtonTitle } from "./SelectButtonTitle";
-import { MountableComponent } from "./MountableComponent";
-export class SelectButtonManager {
-    constructor(elementId) {
-        var _a, _b, _c;
-        this.elementId = elementId;
-        const selectDiv = this.createDiv(SelectButtonManager.MAIN_BUTTON_SUFFIX);
-        const additionalDiv = this.createDiv(SelectButtonManager.ADDITIONAL_BUTTON_SUFFIX);
-        const titleDiv = this.createDiv(SelectButtonManager.SELECT_TITLE_DIV);
-        (_a = document.getElementById(this.elementId)) === null || _a === void 0 ? void 0 : _a.append(selectDiv);
-        (_b = document.getElementById(this.elementId)) === null || _b === void 0 ? void 0 : _b.append(additionalDiv);
-        (_c = document.getElementById(this.elementId)) === null || _c === void 0 ? void 0 : _c.append(titleDiv);
-        this.selectComponent = {
-            mainButton: new MountableComponent(selectDiv),
-            additionalButton: new MountableComponent(additionalDiv),
-            selectTitleButton: new MountableComponent(titleDiv)
-        };
-    }
-    createButton(options, config) {
-        this.button(this.selectComponent.mainButton, options, config);
-    }
-    addButton(options, config) {
-        this.button(this.selectComponent.additionalButton, options, config);
-    }
-    unmountButton() {
-        this.selectComponent.mainButton.unmount();
-        this.selectComponent.additionalButton.unmount();
-        this.selectComponent.selectTitleButton.unmount();
-    }
-    unmountAdditionalButton() {
-        this.selectComponent.additionalButton.unmount();
-        this.selectComponent.selectTitleButton.unmount();
-    }
-    button(button, options, config) {
-        var _a;
-        button.render(_jsx(SelectButton, { elementId: this.elementId, options: options, optionProps: config === null || config === void 0 ? void 0 : config.optionProps, addTitle: (_a = config === null || config === void 0 ? void 0 : config.addTitle) !== null && _a !== void 0 ? _a : false, defaultValue: config === null || config === void 0 ? void 0 : config.defaultValue, width: config === null || config === void 0 ? void 0 : config.width, dropdownTitle: config === null || config === void 0 ? void 0 : config.dropdownTitle, isAdditionalButton: config === null || config === void 0 ? void 0 : config.isAdditionalButton, renderTitle: this.renderTitle.bind(this) }));
-    }
-    renderTitle(title) {
-        this.selectComponent.selectTitleButton.render(_jsx(SelectButtonTitle, { title: title }));
-    }
-    createDiv(suffix) {
-        var _a;
-        const div = (_a = document.getElementById(this.elementId + suffix)) !== null && _a !== void 0 ? _a : document.createElement("div");
-        const id = this.elementId + suffix;
-        div.setAttribute("id", id);
-        div.style.display = "inline-block";
-        return div;
-    }
-}
-SelectButtonManager.MAIN_BUTTON_SUFFIX = "_buttonDiv";
-SelectButtonManager.ADDITIONAL_BUTTON_SUFFIX = "_additionalButtonDiv";
-SelectButtonManager.SELECT_TITLE_DIV = "_selectButtonTitleDiv";

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonTitle.d.ts

@@ -1,6 +0,0 @@
-import React from "react";
-export declare class SelectButtonTitle extends React.Component<{
-    title: string;
-}> {
-    render(): JSX.Element;
-}

package/lib/RcsbFvWeb/RcsbFvComponents/SelectButtonTitle.js

@@ -1,7 +0,0 @@
-import { jsx as _jsx } from "react/jsx-runtime";
-import React from "react";
-export class SelectButtonTitle extends React.Component {
-    render() {
-        return (_jsx("div", { style: { marginLeft: 20 }, children: this.props.title }));
-    }
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.d.ts

@@ -1,11 +0,0 @@
-import { AlignmentResponse, TargetAlignment } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { AlignmentRequestContextType } from "../RcsbFvTrackFactory/TrackFactoryImpl/AlignmentTrackFactory";
-import { BlockFactoryInterface } from "./BlockFactoryInterface";
-import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
-export declare class AlignmentBlockFactory implements BlockFactoryInterface<[AlignmentRequestContextType, AlignmentResponse], [AlignmentRequestContextType, TargetAlignment, AlignmentResponse, number]> {
-    readonly trackFactory: TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]>;
-    readonly trackConfigModifier?: (alignmentContext: AlignmentRequestContextType, targetAlignment: TargetAlignment, alignmentResponse: AlignmentResponse, indexResponse: number) => Promise<Partial<RcsbFvRowConfigInterface>>;
-    constructor(alignmentTrackFactory: TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignment]>, trackModifier?: (alignmentContext: AlignmentRequestContextType, targetAlignment: TargetAlignment, alignmentResponse: AlignmentResponse, indexResponse: number) => Promise<Partial<RcsbFvRowConfigInterface>>);
-    getBlock(alignmentRequestContext: AlignmentRequestContextType, alignmentData: AlignmentResponse): Promise<RcsbFvRowConfigInterface[]>;
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AlignmentBlockFactory.js

@@ -1,23 +0,0 @@
-import { __awaiter } from "tslib";
-export class AlignmentBlockFactory {
-    constructor(alignmentTrackFactory, trackModifier) {
-        this.trackFactory = alignmentTrackFactory;
-        this.trackConfigModifier = trackModifier;
-    }
-    getBlock(alignmentRequestContext, alignmentData) {
-        return __awaiter(this, void 0, void 0, function* () {
-            var _a;
-            alignmentRequestContext = Object.assign(Object.assign({}, alignmentRequestContext), { querySequence: (_a = alignmentData.query_sequence) !== null && _a !== void 0 ? _a : undefined });
-            if (!alignmentData.target_alignment)
-                return [];
-            return (yield Promise.all(alignmentData.target_alignment.map((alignment, index) => __awaiter(this, void 0, void 0, function* () {
-                var _a, _b;
-                if (alignmentRequestContext.filterByTargetContains != null && !((_a = alignment === null || alignment === void 0 ? void 0 : alignment.target_id) === null || _a === void 0 ? void 0 : _a.includes(alignmentRequestContext.filterByTargetContains)))
-                    return;
-                if ((alignment === null || alignment === void 0 ? void 0 : alignment.target_sequence) == null)
-                    return;
-                return Object.assign(Object.assign({}, yield this.trackFactory.getTrack(alignmentRequestContext, alignment)), yield ((_b = this.trackConfigModifier) === null || _b === void 0 ? void 0 : _b.call(this, alignmentRequestContext, alignment, alignmentData, index)));
-            })))).filter((x) => x != undefined);
-        });
-    }
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.d.ts

@@ -1,15 +0,0 @@
-import { AnnotationFeatures } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { AnnotationRequestContext } from "../../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
-import { BlockFactoryInterface } from "./BlockFactoryInterface";
-import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
-import { BlockManagerInterface } from "./BlockManager/BlockManagerInterface";
-import { TrackManagerInterface } from "./BlockManager/TrackManagerInterface";
-export declare class AnnotationsBlockFactory implements BlockFactoryInterface<[AnnotationRequestContext, AnnotationFeatures[]], [TrackManagerInterface]> {
-    private readonly annotationBlockManager;
-    private readonly annotationsBlockData;
-    readonly trackFactory: TrackFactoryInterface<[TrackManagerInterface]>;
-    readonly trackConfigModifier?: (trackManager: TrackManagerInterface) => Promise<Partial<RcsbFvRowConfigInterface>>;
-    constructor(annotationBlockManager: BlockManagerInterface<[AnnotationRequestContext, AnnotationFeatures[]]>, annotationTrackFactory: TrackFactoryInterface<[TrackManagerInterface]>, trackModifier?: (trackManager: TrackManagerInterface) => Promise<Partial<RcsbFvRowConfigInterface>>);
-    getBlock(annotationsRequestContext: AnnotationRequestContext, annotations: AnnotationFeatures[]): Promise<RcsbFvRowConfigInterface[]>;
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/AnnotationsBlockFactory.js

@@ -1,19 +0,0 @@
-import { __awaiter } from "tslib";
-export class AnnotationsBlockFactory {
-    constructor(annotationBlockManager, annotationTrackFactory, trackModifier) {
-        this.annotationsBlockData = new Array();
-        this.annotationBlockManager = annotationBlockManager;
-        this.trackFactory = annotationTrackFactory;
-        this.trackConfigModifier = trackModifier;
-    }
-    getBlock(annotationsRequestContext, annotations) {
-        return __awaiter(this, void 0, void 0, function* () {
-            yield this.annotationBlockManager.setData(annotationsRequestContext, annotations);
-            yield Promise.all(this.annotationBlockManager.getTracks().map((track) => __awaiter(this, void 0, void 0, function* () {
-                var _a;
-                this.annotationsBlockData.push(Object.assign(Object.assign({}, yield this.trackFactory.getTrack(track)), yield ((_a = this.trackConfigModifier) === null || _a === void 0 ? void 0 : _a.call(this, track))));
-            })));
-            return this.annotationsBlockData;
-        });
-    }
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockFactoryInterface.d.ts

@@ -1,7 +0,0 @@
-import { RcsbFvRowConfigInterface } from "@rcsb/rcsb-saguaro/lib/RcsbFv/RcsbFvConfig/RcsbFvConfigInterface";
-import { TrackFactoryInterface } from "../RcsbFvTrackFactory/TrackFactoryInterface";
-export interface BlockFactoryInterface<T extends any[], S extends any[]> {
-    readonly trackFactory: TrackFactoryInterface<S>;
-    readonly trackConfigModifier?: (...args: S) => Promise<Partial<RcsbFvRowConfigInterface>>;
-    getBlock(...args: T): Promise<RcsbFvRowConfigInterface[]>;
-}

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockFactoryInterface.js

@@ -1 +0,0 @@
-export {};

package/lib/RcsbFvWeb/RcsbFvFactories/RcsbFvBlockFactory/BlockManager/AnnotationBlockManager.d.ts

@@ -1,21 +0,0 @@
-import { AnnotationFeatures } from "@rcsb/rcsb-api-tools/build/RcsbGraphQL/Types/Borrego/GqlTypes";
-import { RcsbAnnotationConfig } from "../../../../RcsbAnnotationConfig/RcsbAnnotationConfig";
-import { PolymerEntityInstanceTranslate } from "../../../../RcsbUtils/Translators/PolymerEntityInstanceTranslate";
-import { AnnotationRequestContext } from "../../../../RcsbCollectTools/AnnotationCollector/AnnotationCollectorInterface";
-import { BlockManagerInterface } from "./BlockManagerInterface";
-import { TrackManagerFactoryInterface, TrackManagerInterface } from "./TrackManagerInterface";
-import { RcsbAnnotationConfigInterface } from "../../../../RcsbAnnotationConfig/AnnotationConfigInterface";
-export declare class AnnotationBlockManager implements BlockManagerInterface<[AnnotationRequestContext, AnnotationFeatures[]]> {
-    private readonly rcsbAnnotationConfig;
-    private readonly annotationTracks;
-    private readonly polymerEntityInstanceTranslator?;
-    private readonly trackManagerFactory;
-    constructor(trackManagerFactory: TrackManagerFactoryInterface<[string, RcsbAnnotationConfigInterface, PolymerEntityInstanceTranslate]>, rcsbAnnotationConfig: RcsbAnnotationConfig, polymerEntityInstanceTranslator?: PolymerEntityInstanceTranslate);
-    setData(requestConfig: AnnotationRequestContext, data: Array<AnnotationFeatures>): Promise<void>;
-    getTracks(): Array<TrackManagerInterface>;
-    private has;
-    private orderedTypes;
-    private processAnnotations;
-    private addFeature;
-    private mergeTracks;
-}