@optave/codegraph 3.7.0 → 3.8.1

package/dist/domain/parser.js

@@ -6,8 +6,8 @@ import { debug, warn } from '../infrastructure/logger.js';
 import { getNative, getNativePackageVersion, loadNative } from '../infrastructure/native.js';
 import { toErrorMessage } from '../shared/errors.js';
 // Re-export all extractors for backward compatibility
-export { extractBashSymbols, extractCppSymbols, extractCSharpSymbols, extractCSymbols, extractDartSymbols, extractElixirSymbols, extractGoSymbols, extractHaskellSymbols, extractHCLSymbols, extractJavaSymbols, extractKotlinSymbols, extractLuaSymbols, extractOCamlSymbols, extractPHPSymbols, extractPythonSymbols, extractRubySymbols, extractRustSymbols, extractScalaSymbols, extractSwiftSymbols, extractSymbols, extractZigSymbols, } from '../extractors/index.js';
-import { extractBashSymbols, extractCppSymbols, extractCSharpSymbols, extractCSymbols, extractDartSymbols, extractElixirSymbols, extractGoSymbols, extractHaskellSymbols, extractHCLSymbols, extractJavaSymbols, extractKotlinSymbols, extractLuaSymbols, extractOCamlSymbols, extractPHPSymbols, extractPythonSymbols, extractRubySymbols, extractRustSymbols, extractScalaSymbols, extractSwiftSymbols, extractSymbols, extractZigSymbols, } from '../extractors/index.js';
+export { extractBashSymbols, extractClojureSymbols, extractCppSymbols, extractCSharpSymbols, extractCSymbols, extractCudaSymbols, extractDartSymbols, extractElixirSymbols, extractErlangSymbols, extractFSharpSymbols, extractGleamSymbols, extractGoSymbols, extractGroovySymbols, extractHaskellSymbols, extractHCLSymbols, extractJavaSymbols, extractJuliaSymbols, extractKotlinSymbols, extractLuaSymbols, extractObjCSymbols, extractOCamlSymbols, extractPHPSymbols, extractPythonSymbols, extractRSymbols, extractRubySymbols, extractRustSymbols, extractScalaSymbols, extractSoliditySymbols, extractSwiftSymbols, extractSymbols, extractVerilogSymbols, extractZigSymbols, } from '../extractors/index.js';
+import { extractBashSymbols, extractClojureSymbols, extractCppSymbols, extractCSharpSymbols, extractCSymbols, extractCudaSymbols, extractDartSymbols, extractElixirSymbols, extractErlangSymbols, extractFSharpSymbols, extractGleamSymbols, extractGoSymbols, extractGroovySymbols, extractHaskellSymbols, extractHCLSymbols, extractJavaSymbols, extractJuliaSymbols, extractKotlinSymbols, extractLuaSymbols, extractObjCSymbols, extractOCamlSymbols, extractPHPSymbols, extractPythonSymbols, extractRSymbols, extractRubySymbols, extractRustSymbols, extractScalaSymbols, extractSoliditySymbols, extractSwiftSymbols, extractSymbols, extractVerilogSymbols, extractZigSymbols, } from '../extractors/index.js';
 const __dirname = path.dirname(fileURLToPath(import.meta.url));
 function grammarPath(name) {
     return path.join(__dirname, '..', '..', 'grammars', name);
@@ -84,42 +84,27 @@ export async function createParsers() {
  * Call this between repeated builds in the same process (e.g. benchmarks)
  * to prevent memory accumulation that can cause segfaults.
  */
-export function disposeParsers() {
-    if (_cachedParsers) {
-        for (const [id, parser] of _cachedParsers) {
-            if (parser && typeof parser.delete === 'function') {
-                try {
-                    parser.delete();
-                }
-                catch (e) {
-                    debug(`Failed to dispose parser ${id}: ${e.message}`);
-                }
-            }
-        }
-        _cachedParsers = null;
-    }
-    for (const [id, query] of _queryCache) {
-        if (query && typeof query.delete === 'function') {
+function disposeMapEntries(entries, label) {
+    for (const [id, item] of entries) {
+        if (item && typeof item.delete === 'function') {
             try {
-                query.delete();
+                item.delete();
             }
             catch (e) {
-                debug(`Failed to dispose query ${id}: ${e.message}`);
+                debug(`Failed to dispose ${label} ${id}: ${e.message}`);
             }
         }
     }
+}
+export function disposeParsers() {
+    if (_cachedParsers) {
+        disposeMapEntries(_cachedParsers, 'parser');
+        _cachedParsers = null;
+    }
+    disposeMapEntries(_queryCache, 'query');
     _queryCache.clear();
     if (_cachedLanguages) {
-        for (const [id, lang] of _cachedLanguages) {
-            if (lang && typeof lang.delete === 'function') {
-                try {
-                    lang.delete();
-                }
-                catch (e) {
-                    debug(`Failed to dispose language ${id}: ${e.message}`);
-                }
-            }
-        }
+        disposeMapEntries(_cachedLanguages, 'language');
         _cachedLanguages = null;
     }
     _initialized = false;
@@ -450,11 +435,95 @@ export const LANGUAGE_REGISTRY = [
     },
     {
         id: 'ocaml',
-        extensions: ['.ml', '.mli'],
+        extensions: ['.ml'],
         grammarFile: 'tree-sitter-ocaml.wasm',
         extractor: extractOCamlSymbols,
         required: false,
     },
+    {
+        id: 'ocaml-interface',
+        extensions: ['.mli'],
+        grammarFile: 'tree-sitter-ocaml_interface.wasm',
+        extractor: extractOCamlSymbols,
+        required: false,
+    },
+    {
+        id: 'fsharp',
+        extensions: ['.fs', '.fsx', '.fsi'],
+        grammarFile: 'tree-sitter-fsharp.wasm',
+        extractor: extractFSharpSymbols,
+        required: false,
+    },
+    {
+        id: 'gleam',
+        extensions: ['.gleam'],
+        grammarFile: 'tree-sitter-gleam.wasm',
+        extractor: extractGleamSymbols,
+        required: false,
+    },
+    {
+        id: 'clojure',
+        extensions: ['.clj', '.cljs', '.cljc'],
+        grammarFile: 'tree-sitter-clojure.wasm',
+        extractor: extractClojureSymbols,
+        required: false,
+    },
+    {
+        id: 'julia',
+        extensions: ['.jl'],
+        grammarFile: 'tree-sitter-julia.wasm',
+        extractor: extractJuliaSymbols,
+        required: false,
+    },
+    {
+        id: 'r',
+        extensions: ['.r', '.R'],
+        grammarFile: 'tree-sitter-r.wasm',
+        extractor: extractRSymbols,
+        required: false,
+    },
+    {
+        id: 'erlang',
+        extensions: ['.erl', '.hrl'],
+        grammarFile: 'tree-sitter-erlang.wasm',
+        extractor: extractErlangSymbols,
+        required: false,
+    },
+    {
+        id: 'solidity',
+        extensions: ['.sol'],
+        grammarFile: 'tree-sitter-solidity.wasm',
+        extractor: extractSoliditySymbols,
+        required: false,
+    },
+    {
+        id: 'objc',
+        extensions: ['.m'],
+        grammarFile: 'tree-sitter-objc.wasm',
+        extractor: extractObjCSymbols,
+        required: false,
+    },
+    {
+        id: 'cuda',
+        extensions: ['.cu', '.cuh'],
+        grammarFile: 'tree-sitter-cuda.wasm',
+        extractor: extractCudaSymbols,
+        required: false,
+    },
+    {
+        id: 'groovy',
+        extensions: ['.groovy', '.gvy'],
+        grammarFile: 'tree-sitter-groovy.wasm',
+        extractor: extractGroovySymbols,
+        required: false,
+    },
+    {
+        id: 'verilog',
+        extensions: ['.v', '.sv'],
+        grammarFile: 'tree-sitter-verilog.wasm',
+        extractor: extractVerilogSymbols,
+        required: false,
+    },
 ];
 const _extToLang = new Map();
 for (const entry of LANGUAGE_REGISTRY) {
@@ -662,7 +731,7 @@ export function getActiveEngine(opts = {}) {
  */
 export function createParseTreeCache() {
     const native = loadNative();
-    if (!native || !native.ParseTreeCache)
+    if (!native?.ParseTreeCache)
         return null;
     return new native.ParseTreeCache();
 }

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package/dist/domain/search/generator.js

@@ -74,7 +74,7 @@ export async function buildEmbeddings(rootDir, modelKey, customDbPath, options =
     const contextWindow = config.contextWindow;
     let overflowCount = 0;
     for (const [file, fileNodes] of byFile) {
-        const fullPath = path.join(rootDir, file);
+        const fullPath = path.isAbsolute(file) ? file : path.join(rootDir, file);
         let lines;
         try {
             lines = fs.readFileSync(fullPath, 'utf-8').split('\n');

package/dist/domain/search/generator.js.map

@@ -1 +1 @@
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package/dist/domain/search/models.d.ts

@@ -11,16 +11,17 @@ export declare const DEFAULT_MODEL: string;
 /** @internal Used by generator.js — not part of the public barrel. */
 export declare function getModelConfig(modelKey?: string): ModelConfig;
 /**
- * Prompt the user to install a missing package interactively.
+ * Attempt to install a missing package.
+ * In TTY environments, prompts the user for confirmation first.
+ * In non-TTY environments (CI, piped stdin), installs automatically with a log message.
  * Returns true if the package was installed, false otherwise.
- * Skips the prompt entirely in non-TTY environments (CI, piped stdin).
  * @internal Not part of the public barrel.
  */
 export declare function promptInstall(packageName: string): Promise<boolean>;
 /**
  * Lazy-load @huggingface/transformers.
  * If the package is missing, prompts the user to install it interactively.
- * In non-TTY environments, prints an error and exits.
+ * In non-TTY environments, attempts automatic installation.
  * @internal Not part of the public barrel.
  */
 export declare function loadTransformers(): Promise<unknown>;

package/dist/domain/search/models.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"models.d.ts","sourceRoot":"","sources":["../../../src/domain/search/models.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,aAAa,EAAE,MAAM,CAAC;IACtB,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,OAAO,CAAC;CACpB;AAUD,eAAO,MAAM,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,WAAW,CAkD9C,CAAC;AAEF,eAAO,MAAM,oBAAoB,EAAE,SAAS,MAAM,EAA6B,CAAC;AAEhF,eAAO,MAAM,aAAa,EAAE,MAAqB,CAAC;AAYlD,sEAAsE;AACtE,wBAAgB,cAAc,CAAC,QAAQ,CAAC,EAAE,MAAM,GAAG,WAAW,CAO7D;AAED;;;;;GAKG;AACH,wBAAgB,aAAa,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAsBnE;AAED;;;;;GAKG;AACH,wBAAsB,gBAAgB,IAAI,OAAO,CAAC,OAAO,CAAC,CAkBzD;AAED;;;GAGG;AACH,wBAAsB,YAAY,IAAI,OAAO,CAAC,IAAI,CAAC,CAMlD;AA2CD;;GAEG;AACH,wBAAsB,KAAK,CACzB,KAAK,EAAE,MAAM,EAAE,EACf,QAAQ,CAAC,EAAE,MAAM,GAChB,OAAO,CAAC;IAAE,OAAO,EAAE,YAAY,EAAE,CAAC;IAAC,GAAG,EAAE,MAAM,CAAA;CAAE,CAAC,CA6BnD"}
+{"version":3,"file":"models.d.ts","sourceRoot":"","sources":["../../../src/domain/search/models.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,WAAW;IAC1B,IAAI,EAAE,MAAM,CAAC;IACb,GAAG,EAAE,MAAM,CAAC;IACZ,aAAa,EAAE,MAAM,CAAC;IACtB,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,OAAO,CAAC;CACpB;AAUD,eAAO,MAAM,MAAM,EAAE,MAAM,CAAC,MAAM,EAAE,WAAW,CAkD9C,CAAC;AAEF,eAAO,MAAM,oBAAoB,EAAE,SAAS,MAAM,EAA6B,CAAC;AAEhF,eAAO,MAAM,aAAa,EAAE,MAAqB,CAAC;AAYlD,sEAAsE;AACtE,wBAAgB,cAAc,CAAC,QAAQ,CAAC,EAAE,MAAM,GAAG,WAAW,CAO7D;AAED;;;;;;GAMG;AACH,wBAAgB,aAAa,CAAC,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAkCnE;AAED;;;;;GAKG;AACH,wBAAsB,gBAAgB,IAAI,OAAO,CAAC,OAAO,CAAC,CAkBzD;AAED;;;GAGG;AACH,wBAAsB,YAAY,IAAI,OAAO,CAAC,IAAI,CAAC,CAMlD;AA2CD;;GAEG;AACH,wBAAsB,KAAK,CACzB,KAAK,EAAE,MAAM,EAAE,EACf,QAAQ,CAAC,EAAE,MAAM,GAChB,OAAO,CAAC;IAAE,OAAO,EAAE,YAAY,EAAE,CAAC;IAAC,GAAG,EAAE,MAAM,CAAA;CAAE,CAAC,CA6BnD"}

package/dist/domain/search/models.js

@@ -79,14 +79,27 @@ export function getModelConfig(modelKey) {
     return config;
 }
 /**
- * Prompt the user to install a missing package interactively.
+ * Attempt to install a missing package.
+ * In TTY environments, prompts the user for confirmation first.
+ * In non-TTY environments (CI, piped stdin), installs automatically with a log message.
  * Returns true if the package was installed, false otherwise.
- * Skips the prompt entirely in non-TTY environments (CI, piped stdin).
  * @internal Not part of the public barrel.
  */
 export function promptInstall(packageName) {
-    if (!process.stdin.isTTY)
-        return Promise.resolve(false);
+    if (!process.stdin.isTTY) {
+        info(`Installing ${packageName} (optional dependency for semantic search)…`);
+        try {
+            execFileSync('npm', ['install', '--no-save', packageName], {
+                stdio: 'inherit',
+                timeout: 300_000,
+            });
+            return Promise.resolve(true);
+        }
+        catch (err) {
+            info(`Auto-install failed: ${err instanceof Error ? err.message : String(err)}`);
+            return Promise.resolve(false);
+        }
+    }
     return new Promise((resolve) => {
         const rl = createInterface({ input: process.stdin, output: process.stderr });
         rl.question(`Semantic search requires ${packageName}. Install it now? [y/N] `, (answer) => {
@@ -109,7 +122,7 @@ export function promptInstall(packageName) {
 /**
  * Lazy-load @huggingface/transformers.
  * If the package is missing, prompts the user to install it interactively.
- * In non-TTY environments, prints an error and exits.
+ * In non-TTY environments, attempts automatic installation.
  * @internal Not part of the public barrel.
  */
 export async function loadTransformers() {

package/dist/domain/search/models.js.map

@@ -1 +1 @@
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package/dist/domain/search/search/hybrid.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"hybrid.d.ts","sourceRoot":"","sources":["../../../../src/domain/search/search/hybrid.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAC;AAGxD,UAAU,YAAY;IACpB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,GAAG,EAAE,MAAM,CAAC;IACZ,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,YAAY,EAAE,MAAM,GAAG,IAAI,CAAC;CAC7B;AAED,MAAM,WAAW,kBAAkB;IACjC,OAAO,EAAE,YAAY,EAAE,CAAC;CACzB;AAED,wBAAsB,gBAAgB,CACpC,KAAK,EAAE,MAAM,EACb,YAAY,EAAE,MAAM,GAAG,SAAS,EAChC,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAwIpC"}
+{"version":3,"file":"hybrid.d.ts","sourceRoot":"","sources":["../../../../src/domain/search/search/hybrid.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAC;AAGxD,UAAU,YAAY;IACpB,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,IAAI,EAAE,MAAM,GAAG,IAAI,CAAC;IACpB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,GAAG,EAAE,MAAM,CAAC;IACZ,SAAS,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,QAAQ,EAAE,MAAM,GAAG,IAAI,CAAC;IACxB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;IAC1B,YAAY,EAAE,MAAM,GAAG,IAAI,CAAC;CAC7B;AAED,MAAM,WAAW,kBAAkB;IACjC,OAAO,EAAE,YAAY,EAAE,CAAC;CACzB;AA2ID,wBAAsB,gBAAgB,CACpC,KAAK,EAAE,MAAM,EACb,YAAY,EAAE,MAAM,GAAG,SAAS,EAChC,IAAI,GAAE,kBAAuB,GAC5B,OAAO,CAAC,kBAAkB,GAAG,IAAI,CAAC,CAiBpC"}

package/dist/domain/search/search/hybrid.js

@@ -3,23 +3,15 @@ import { loadConfig } from '../../../infrastructure/config.js';
 import { hasFtsIndex } from '../stores/fts5.js';
 import { ftsSearchData } from './keyword.js';
 import { searchData } from './semantic.js';
-export async function hybridSearchData(query, customDbPath, opts = {}) {
-    const config = opts.config || loadConfig();
-    const searchCfg = config.search || {};
-    const limit = opts.limit ?? searchCfg.topK ?? 15;
-    const k = opts.rrfK ?? searchCfg.rrfK ?? 60;
-    const topK = (opts.limit ?? searchCfg.topK ?? 15) * 5;
-    const queries = typeof query === 'string'
-        ? query
-            .split(';')
-            .map((q) => q.trim())
-            .filter((q) => q.length > 0)
-        : [query];
-    const checkDb = openReadonlyOrFail(customDbPath);
-    const ftsAvailable = hasFtsIndex(checkDb);
-    checkDb.close();
-    if (!ftsAvailable)
-        return null;
+/** Parse a semicolon-delimited query string into individual queries. */
+function parseQueries(query) {
+    return query
+        .split(';')
+        .map((q) => q.trim())
+        .filter((q) => q.length > 0);
+}
+/** Collect BM25 and semantic ranked lists for each query. */
+async function collectRankedLists(queries, customDbPath, opts, topK) {
     const rankedLists = [];
     for (const q of queries) {
         const bm25Data = ftsSearchData(q, customDbPath, { ...opts, limit: topK });
@@ -45,6 +37,10 @@ export async function hybridSearchData(query, customDbPath, opts = {}) {
             })));
         }
     }
+    return rankedLists;
+}
+/** Reciprocal Rank Fusion: merge ranked lists into a single scored result set. */
+function fuseResults(rankedLists, k, limit) {
     const fusionMap = new Map();
     for (const list of rankedLists) {
         for (const item of list) {
@@ -80,7 +76,7 @@ export async function hybridSearchData(query, customDbPath, opts = {}) {
             }
         }
     }
-    const results = [...fusionMap.values()]
+    return [...fusionMap.values()]
         .sort((a, b) => b.rrfScore - a.rrfScore)
         .slice(0, limit)
         .map((e) => ({
@@ -97,6 +93,21 @@ export async function hybridSearchData(query, customDbPath, opts = {}) {
         similarity: e.similarity,
         semanticRank: e.semanticRank,
     }));
+}
+export async function hybridSearchData(query, customDbPath, opts = {}) {
+    const config = opts.config || loadConfig();
+    const searchCfg = config.search || {};
+    const limit = opts.limit ?? searchCfg.topK ?? 15;
+    const k = opts.rrfK ?? searchCfg.rrfK ?? 60;
+    const topK = (opts.limit ?? searchCfg.topK ?? 15) * 5;
+    const checkDb = openReadonlyOrFail(customDbPath);
+    const ftsAvailable = hasFtsIndex(checkDb);
+    checkDb.close();
+    if (!ftsAvailable)
+        return null;
+    const queries = parseQueries(query);
+    const rankedLists = await collectRankedLists(queries, customDbPath, opts, topK);
+    const results = fuseResults(rankedLists, k, limit);
     return { results };
 }
 //# sourceMappingURL=hybrid.js.map

package/dist/domain/search/search/hybrid.js.map

@@ -1 +1 @@
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package/dist/extractors/clojure.d.ts

@@ -0,0 +1,12 @@
+import type { ExtractorOutput, TreeSitterTree } from '../types.js';
+/**
+ * Extract symbols from Clojure files.
+ *
+ * Clojure tree-sitter grammar (sogaiu/tree-sitter-clojure) notes:
+ * - The grammar is minimal: everything is a list/vector/map/symbol
+ * - We detect definitions by the first symbol in a list: defn, def, defprotocol, etc.
+ * - Namespace: (ns name ...)
+ * - Imports: (:require ...) inside ns, or (require ...)
+ */
+export declare function extractClojureSymbols(tree: TreeSitterTree, _filePath: string): ExtractorOutput;
+//# sourceMappingURL=clojure.d.ts.map

package/dist/extractors/clojure.d.ts.map

@@ -0,0 +1 @@
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