@optave/codegraph 3.7.0 → 3.8.1

package/README.md

@@ -80,7 +80,7 @@ No config files, no Docker, no JVM, no API keys, no accounts. Point your agent a
 
 | Capability | codegraph | [joern](https://github.com/joernio/joern) | [narsil-mcp](https://github.com/postrv/narsil-mcp) | [cpg](https://github.com/Fraunhofer-AISEC/cpg) | [axon](https://github.com/harshkedia177/axon) | [GitNexus](https://github.com/abhigyanpatwari/GitNexus) |
 |---|:---:|:---:|:---:|:---:|:---:|:---:|
-| Languages | **23** | ~12 | **32** | ~10 | 3 | 13 |
+| Languages | **34** | ~12 | **32** | ~10 | 3 | 13 |
 | MCP server | **Yes** | — | **Yes** | **Yes** | **Yes** | **Yes** |
 | Dataflow + CFG + AST querying | **Yes** | **Yes** | **Yes**¹ | **Yes** | — | — |
 | Hybrid search (BM25 + semantic) | **Yes** | — | — | — | **Yes** | **Yes** |
@@ -104,9 +104,9 @@ No config files, no Docker, no JVM, no API keys, no accounts. Point your agent a
 | **🔬** | **Function-level, not just files** | Traces `handleAuth()` → `validateToken()` → `decryptJWT()` and shows 14 callers across 9 files break if `decryptJWT` changes |
 | **⚡** | **Always-fresh graph** | Three-tier change detection: journal (O(changed)) → mtime+size (O(n) stats) → hash (O(changed) reads). Sub-second rebuilds — agents work with current data |
 | **💥** | **Git diff impact** | `codegraph diff-impact` shows changed functions, their callers, and full blast radius — enriched with historically coupled files from git co-change analysis. Ships with a GitHub Actions workflow |
-| **🌐** | **Multi-language, one graph** | JS/TS + Python + Go + Rust + Java + C# + PHP + Ruby + C + C++ + Kotlin + Swift + Scala + Bash + HCL + Elixir + Lua + Dart + Zig + Haskell + OCaml in a single graph — agents don't need per-language tools |
+| **🌐** | **Multi-language, one graph** | 34 languages in a single graph — JS/TS, Python, Go, Rust, Java, C#, PHP, Ruby, C/C++, Kotlin, Swift, Scala, Bash, HCL, Elixir, Lua, Dart, Zig, Haskell, OCaml, F#, Gleam, Clojure, Julia, R, Erlang, Solidity, Objective-C, CUDA, Groovy, Verilog — agents don't need per-language tools |
 | **🧠** | **Hybrid search** | BM25 keyword + semantic embeddings fused via RRF — `hybrid` (default), `semantic`, or `keyword` mode; multi-query via `"auth; token; JWT"` |
-| **🔬** | **Dataflow + CFG** | Track how data flows through functions (`flows_to`, `returns`, `mutates`) and visualize intraprocedural control flow graphs for all 23 languages |
+| **🔬** | **Dataflow + CFG** | Track how data flows through functions (`flows_to`, `returns`, `mutates`) and visualize intraprocedural control flow graphs for all 34 languages |
 | **🔓** | **Fully local, zero cost** | No API keys, no accounts, no network calls. Optionally bring your own LLM provider — your code only goes where you choose |
 
 ---
@@ -186,7 +186,7 @@ cd codegraph && npm install && npm link
 | 🧠 | **Semantic search** | Embeddings-powered natural language search with multi-query RRF ranking |
 | 👀 | **Watch mode** | Incrementally update the graph as files change |
 | ⚡ | **Always fresh** | Three-tier incremental detection — sub-second rebuilds even on large codebases |
-| 🔬 | **Data flow analysis** | Intraprocedural parameter tracking, return consumers, argument flows, and mutation detection — all 23 languages |
+| 🔬 | **Data flow analysis** | Intraprocedural parameter tracking, return consumers, argument flows, and mutation detection — all 34 languages |
 | 🧮 | **Complexity metrics** | Cognitive, cyclomatic, nesting depth, Halstead, and Maintainability Index per function |
 | 🏘️ | **Community detection** | Leiden clustering to discover natural module boundaries and architectural drift |
 | 📜 | **Manifesto rule engine** | Configurable pass/fail rules with warn/fail thresholds for CI gates via `check` (exit code 1 on fail) |
@@ -199,8 +199,8 @@ cd codegraph && npm install && npm link
 | ✅ | **CI validation predicates** | `check` command with configurable gates: complexity, blast radius, cycles, boundary violations — exit code 0/1 for CI |
 | 📋 | **Composite audit** | Single `audit` command combining explain + impact + health metrics per function — one call instead of 3-4 |
 | 🚦 | **Triage queue** | `triage` merges connectivity, hotspots, roles, and complexity into a ranked audit priority queue |
-| 🔬 | **Dataflow analysis** | Track how data moves through functions with `flows_to`, `returns`, and `mutates` edges — all 23 languages, included by default, skip with `--no-dataflow` |
-| 🧩 | **Control flow graph** | Intraprocedural CFG construction for all 23 languages — `cfg` command with text/DOT/Mermaid output, included by default, skip with `--no-cfg` |
+| 🔬 | **Dataflow analysis** | Track how data moves through functions with `flows_to`, `returns`, and `mutates` edges — all 34 languages, included by default, skip with `--no-dataflow` |
+| 🧩 | **Control flow graph** | Intraprocedural CFG construction for all 34 languages — `cfg` command with text/DOT/Mermaid output, included by default, skip with `--no-cfg` |
 | 🔎 | **AST node querying** | Stored queryable AST nodes (calls, `new`, string, regex, throw, await) — `ast` command with SQL GLOB pattern matching |
 | 🧬 | **Expanded node/edge types** | `parameter`, `property`, `constant` node kinds with `parent_id` for sub-declaration queries; `contains`, `parameter_of`, `receiver` edge kinds |
 | 📊 | **Exports analysis** | `exports <file>` shows all exported symbols with per-symbol consumers, re-export detection, and counts |
@@ -320,7 +320,7 @@ codegraph ast -k call                 # Filter by kind: call, new, string, regex
 codegraph ast -k throw --file src/    # Combine kind and file filters
 ```
 
-> **Note:** Dataflow and CFG are included by default for all 23 languages. Use `--no-dataflow` / `--no-cfg` for faster builds.
+> **Note:** Dataflow and CFG are included by default for all 34 languages. Use `--no-dataflow` / `--no-cfg` for faster builds.
 
 
 ### Audit, Triage & Batch
@@ -494,6 +494,17 @@ codegraph registry remove <name>  # Unregister
 | ![Zig](https://img.shields.io/badge/-Zig-F7A41D?style=flat-square&logo=zig&logoColor=white) | `.zig` | ✓ | ✓ | ✓ | — | — | ✓ |
 | ![Haskell](https://img.shields.io/badge/-Haskell-5D4F85?style=flat-square&logo=haskell&logoColor=white) | `.hs` | ✓ | ✓ | ✓ | — | — | ✓ |
 | ![OCaml](https://img.shields.io/badge/-OCaml-EC6813?style=flat-square&logo=ocaml&logoColor=white) | `.ml`, `.mli` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![F#](https://img.shields.io/badge/-F%23-378BBA?style=flat-square&logo=fsharp&logoColor=white) | `.fs`, `.fsx`, `.fsi` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![Gleam](https://img.shields.io/badge/-Gleam-FFAFF3?style=flat-square&logoColor=black) | `.gleam` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![Clojure](https://img.shields.io/badge/-Clojure-5881D8?style=flat-square&logo=clojure&logoColor=white) | `.clj`, `.cljs`, `.cljc` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![Julia](https://img.shields.io/badge/-Julia-9558B2?style=flat-square&logo=julia&logoColor=white) | `.jl` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![R](https://img.shields.io/badge/-R-276DC3?style=flat-square&logo=r&logoColor=white) | `.r`, `.R` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![Erlang](https://img.shields.io/badge/-Erlang-A90533?style=flat-square&logo=erlang&logoColor=white) | `.erl`, `.hrl` | ✓ | ✓ | ✓ | — | — | ✓ |
+| ![Solidity](https://img.shields.io/badge/-Solidity-363636?style=flat-square&logo=solidity&logoColor=white) | `.sol` | ✓ | ✓ | ✓ | ✓ | — | ✓ |
+| ![Objective-C](https://img.shields.io/badge/-Objective--C-438EFF?style=flat-square&logoColor=white) | `.m` | ✓ | ✓ | ✓ | ✓ | — | ✓ |
+| ![CUDA](https://img.shields.io/badge/-CUDA-76B900?style=flat-square&logo=nvidia&logoColor=white) | `.cu`, `.cuh` | ✓ | ✓ | ✓ | ✓ | — | ✓ |
+| ![Groovy](https://img.shields.io/badge/-Groovy-4298B8?style=flat-square&logo=apachegroovy&logoColor=white) | `.groovy`, `.gvy` | ✓ | ✓ | ✓ | ✓ | — | ✓ |
+| ![Verilog](https://img.shields.io/badge/-Verilog-848484?style=flat-square&logoColor=white) | `.v`, `.sv` | ✓ | ✓ | ✓ | — | — | ✓ |
 | ![Terraform](https://img.shields.io/badge/-Terraform-844FBA?style=flat-square&logo=terraform&logoColor=white) | `.tf`, `.hcl` | ✓ | —³ | —³ | —³ | —³ | —³ |
 
 > ¹ **Heritage** = `extends`, `implements`, `include`/`extend` (Ruby), trait `impl` (Rust), receiver methods (Go).
@@ -577,15 +588,16 @@ Codegraph also extracts symbols from common callback patterns: Commander `.comma
 
 Self-measured on every release via CI ([build benchmarks](generated/benchmarks/BUILD-BENCHMARKS.md) | [embedding benchmarks](generated/benchmarks/EMBEDDING-BENCHMARKS.md) | [query benchmarks](generated/benchmarks/QUERY-BENCHMARKS.md) | [incremental benchmarks](generated/benchmarks/INCREMENTAL-BENCHMARKS.md) | [resolution precision/recall](tests/benchmarks/resolution/)):
 
-| Metric | Latest (WASM) |
+| Metric | Latest |
 |---|---|
-| Build speed | **13.3 ms/file** |
-| Query time | **12ms** |
-| No-op rebuild | **14ms** |
-| 1-file rebuild | **547ms** |
-| Query: fn-deps | **2.1ms** |
-| Query: path | **1.9ms** |
-| ~50,000 files (est.) | **~665.0s build** |
+| Build speed (native) | **2.1 ms/file** |
+| Build speed (WASM) | **2.2 ms/file** |
+| Query time | **14ms** |
+| No-op rebuild (native) | **8ms** |
+| 1-file rebuild (native) | **33ms** |
+| Query: fn-deps | **2.5ms** |
+| Query: path | **2.1ms** |
+| ~50,000 files (est.) | **~105.0s build** |
 
 Metrics are normalized per file for cross-version comparability. Times above are for a full initial build — incremental rebuilds only re-parse changed files.
 
@@ -798,7 +810,7 @@ See **[ROADMAP.md](docs/roadmap/ROADMAP.md)** for the full development roadmap a
 6. ~~**Resolution Accuracy**~~ — **Complete** (v3.3.1) — type inference, receiver type tracking, dead role sub-categories, resolution benchmarks, `package.json` exports, monorepo workspace resolution
 7. ~~**TypeScript Migration**~~ — **Complete** (v3.4.0) — all 271 source files migrated from JS to TS, zero `.js` remaining
 8. ~~**Native Analysis Acceleration**~~ — **Complete** (v3.5.0) — all build phases in Rust/rusqlite, sub-100ms incremental rebuilds, better-sqlite3 lazy-loaded as fallback only
-9. **Expanded Language Support** — **In Progress** (v3.7.0) — Batch 1 shipped (C, C++, Kotlin, Swift, Scala, Bash), Batch 2 shipped (Elixir, Lua, Dart, Zig, Haskell, OCaml); 11 remaining in 2 batches (23 → 34)
+9. ~~**Expanded Language Support**~~ — **Complete** (v3.8.0) — 23 new languages in 4 batches (11 → 34), dual-engine WASM + Rust support for all
 10. **Analysis Depth** — TypeScript-native resolution, inter-procedural type propagation, field-based points-to analysis
 11. **Runtime & Extensibility** — event-driven pipeline, plugin system, query caching, pagination
 12. **Quality, Security & Technical Debt** — supply-chain security (SBOM, SLSA), CI coverage gates, timer cleanup, tech debt kill list

package/dist/ast-analysis/engine.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../../src/ast-analysis/engine.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AAMH,OAAO,KAAK,EACV,YAAY,EACZ,cAAc,EAEd,qBAAqB,EAKrB,UAAU,EACV,eAAe,EAKhB,MAAM,aAAa,CAAC;AAyXrB,wBAAsB,WAAW,CAC/B,EAAE,EAAE,qBAAqB,EACzB,WAAW,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAAC,EACzC,OAAO,EAAE,MAAM,EACf,IAAI,EAAE,YAAY,EAClB,UAAU,CAAC,EAAE,UAAU,GACtB,OAAO,CAAC,cAAc,CAAC,CAiDzB"}
+{"version":3,"file":"engine.d.ts","sourceRoot":"","sources":["../../src/ast-analysis/engine.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;;;GAeG;AASH,OAAO,KAAK,EACV,YAAY,EACZ,cAAc,EAEd,qBAAqB,EAKrB,UAAU,EACV,eAAe,EAQhB,MAAM,aAAa,CAAC;AAojBrB,wBAAsB,WAAW,CAC/B,EAAE,EAAE,qBAAqB,EACzB,WAAW,EAAE,GAAG,CAAC,MAAM,EAAE,eAAe,CAAC,EACzC,OAAO,EAAE,MAAM,EACf,IAAI,EAAE,YAAY,EAClB,UAAU,CAAC,EAAE,UAAU,GACtB,OAAO,CAAC,cAAc,CAAC,CA2DzB"}

package/dist/ast-analysis/engine.js

@@ -14,10 +14,13 @@
  * functions already expect as pre-computed data (same fields as native engine
  * output). This eliminates redundant tree traversals per file.
  */
+import fs from 'node:fs';
 import path from 'node:path';
 import { performance } from 'node:perf_hooks';
 import { bulkNodeIdsByFile } from '../db/index.js';
 import { debug } from '../infrastructure/logger.js';
+import { loadNative } from '../infrastructure/native.js';
+import { toErrorMessage } from '../shared/errors.js';
 import { computeLOCMetrics, computeMaintainabilityIndex } from './metrics.js';
 import { AST_TYPE_MAPS, CFG_RULES, COMPLEXITY_RULES, DATAFLOW_RULES, HALSTEAD_RULES, } from './rules/index.js';
 import { buildExtensionSet, buildExtToLangMap } from './shared.js';
@@ -39,6 +42,170 @@ async function getParserModule() {
         _parserModule = await import('../domain/parser.js');
     return _parserModule;
 }
+/**
+ * Try native Rust analysis for files missing complexity/CFG/dataflow data.
+ * Reads source from disk, calls the native standalone functions, and stores
+ * results directly on definitions/symbols.
+ */
+/** Determine which native analyses a file still needs. */
+function detectNativeNeeds(symbols, ext, langId, opts) {
+    const defs = symbols.definitions || [];
+    const langSupportsComplexity = COMPLEXITY_EXTENSIONS.has(ext) || COMPLEXITY_RULES.has(langId);
+    const langSupportsCfg = CFG_EXTENSIONS.has(ext) || CFG_RULES.has(langId);
+    const langSupportsDataflow = DATAFLOW_EXTENSIONS.has(ext) || DATAFLOW_RULES.has(langId);
+    return {
+        complexity: opts.doComplexity &&
+            langSupportsComplexity &&
+            defs.some((d) => hasFuncBody(d) && !d.complexity),
+        cfg: opts.doCfg &&
+            langSupportsCfg &&
+            defs.some((d) => hasFuncBody(d) && d.cfg !== null && !Array.isArray(d.cfg?.blocks)),
+        dataflow: opts.doDataflow && !symbols.dataflow && langSupportsDataflow,
+    };
+}
+/** Run native analysis passes for a single file. */
+function runNativeFileAnalysis(native, source, absPath, relPath, langId, symbols, needs) {
+    const defs = symbols.definitions || [];
+    if (needs.complexity && native.analyzeComplexity) {
+        try {
+            const results = native.analyzeComplexity(source, absPath, langId);
+            storeNativeComplexityResults(results, defs);
+        }
+        catch (err) {
+            debug(`native analyzeComplexity failed for ${relPath}: ${toErrorMessage(err)}`);
+        }
+    }
+    if (needs.cfg && native.buildCfgAnalysis) {
+        try {
+            const results = native.buildCfgAnalysis(source, absPath, langId);
+            storeNativeCfgResults(results, defs);
+        }
+        catch (err) {
+            debug(`native buildCfgAnalysis failed for ${relPath}: ${toErrorMessage(err)}`);
+        }
+    }
+    if (needs.dataflow && native.extractDataflowAnalysis) {
+        try {
+            const result = native.extractDataflowAnalysis(source, absPath, langId);
+            if (result)
+                symbols.dataflow = result;
+        }
+        catch (err) {
+            debug(`native extractDataflowAnalysis failed for ${relPath}: ${toErrorMessage(err)}`);
+        }
+    }
+}
+function runNativeAnalysis(native, fileSymbols, rootDir, opts, extToLang) {
+    const optsFlags = {
+        doComplexity: opts.complexity !== false,
+        doCfg: opts.cfg !== false,
+        doDataflow: opts.dataflow !== false,
+    };
+    for (const [relPath, symbols] of fileSymbols) {
+        if (symbols._tree)
+            continue;
+        const ext = path.extname(relPath).toLowerCase();
+        const langId = symbols._langId || extToLang.get(ext);
+        if (!langId)
+            continue;
+        const needs = detectNativeNeeds(symbols, ext, langId, optsFlags);
+        if (!needs.complexity && !needs.cfg && !needs.dataflow)
+            continue;
+        const absPath = path.join(rootDir, relPath);
+        let source;
+        try {
+            source = fs.readFileSync(absPath, 'utf-8');
+        }
+        catch (e) {
+            debug(`runNativeAnalysis: failed to read ${relPath}: ${toErrorMessage(e)}`);
+            continue;
+        }
+        runNativeFileAnalysis(native, source, absPath, relPath, langId, symbols, needs);
+    }
+}
+/** Store native complexity results on definitions, matched by line number. */
+function storeNativeComplexityResults(results, defs) {
+    const byLine = new Map();
+    for (const r of results) {
+        if (!byLine.has(r.line))
+            byLine.set(r.line, []);
+        byLine.get(r.line).push(r);
+    }
+    for (const def of defs) {
+        if ((def.kind === 'function' || def.kind === 'method') && def.line && !def.complexity) {
+            const candidates = byLine.get(def.line);
+            if (!candidates)
+                continue;
+            const match = candidates.length === 1
+                ? candidates[0]
+                : (candidates.find((r) => r.name === def.name) ?? candidates[0]);
+            if (!match)
+                continue;
+            const { complexity: c } = match;
+            def.complexity = {
+                cognitive: c.cognitive,
+                cyclomatic: c.cyclomatic,
+                maxNesting: c.maxNesting,
+                halstead: c.halstead
+                    ? {
+                        volume: c.halstead.volume,
+                        difficulty: c.halstead.difficulty,
+                        effort: c.halstead.effort,
+                        bugs: c.halstead.bugs,
+                    }
+                    : undefined,
+                loc: c.loc
+                    ? { loc: c.loc.loc, sloc: c.loc.sloc, commentLines: c.loc.commentLines }
+                    : undefined,
+                maintainabilityIndex: c.maintainabilityIndex ?? undefined,
+            };
+        }
+    }
+}
+/** Override a definition's cyclomatic complexity with a CFG-derived value and recompute MI. */
+function overrideCyclomaticFromCfg(def, cfgCyclomatic) {
+    if (!def.complexity)
+        return;
+    if (cfgCyclomatic <= 0) {
+        debug(`overrideCyclomaticFromCfg: skipping ${def.name} — cfgCyclomatic=${cfgCyclomatic}`);
+        return;
+    }
+    def.complexity.cyclomatic = cfgCyclomatic;
+    const { loc, halstead } = def.complexity;
+    const volume = halstead ? halstead.volume : 0;
+    const commentRatio = loc && loc.loc > 0 ? loc.commentLines / loc.loc : 0;
+    def.complexity.maintainabilityIndex = computeMaintainabilityIndex(volume, cfgCyclomatic, loc?.sloc ?? 0, commentRatio);
+}
+/** Store native CFG results on definitions, matched by line number. */
+function storeNativeCfgResults(results, defs) {
+    const byLine = new Map();
+    for (const r of results) {
+        if (!byLine.has(r.line))
+            byLine.set(r.line, []);
+        byLine.get(r.line).push(r);
+    }
+    for (const def of defs) {
+        if ((def.kind === 'function' || def.kind === 'method') &&
+            def.line &&
+            def.cfg !== null &&
+            !def.cfg?.blocks?.length) {
+            const candidates = byLine.get(def.line);
+            if (!candidates)
+                continue;
+            const match = candidates.length === 1
+                ? candidates[0]
+                : (candidates.find((r) => r.name === def.name) ?? candidates[0]);
+            if (!match)
+                continue;
+            def.cfg = match.cfg;
+            // Override complexity cyclomatic with CFG-derived value
+            const { edges, blocks } = match.cfg;
+            if (edges && blocks) {
+                overrideCyclomaticFromCfg(def, edges.length - blocks.length + 2);
+            }
+        }
+    }
+}
 // ─── WASM pre-parse ─────────────────────────────────────────────────────
 async function ensureWasmTreesIfNeeded(fileSymbols, opts, rootDir) {
     const doAst = opts.ast !== false;
@@ -53,25 +220,18 @@ async function ensureWasmTreesIfNeeded(fileSymbols, opts, rootDir) {
             continue;
         const ext = path.extname(relPath).toLowerCase();
         const defs = symbols.definitions || [];
-        // Only consider definitions with a real function body.
-        // Interface/type property signatures are extracted as methods but correctly
-        // lack complexity/CFG data from the native engine. Exclude them by:
-        // 1. Single-line span (endLine === line) — type property on one line
-        // 2. Dotted names (e.g. "Interface.prop") — child definitions of types
-        const hasFuncBody = (d) => (d.kind === 'function' || d.kind === 'method') &&
-            d.line > 0 &&
-            d.endLine != null &&
-            d.endLine > d.line &&
-            !d.name.includes('.');
         // AST: need tree when native didn't provide non-call astNodes
-        const needsAst = doAst && !Array.isArray(symbols.astNodes) && WALK_EXTENSIONS.has(ext);
+        const lid = symbols._langId || '';
+        const needsAst = doAst &&
+            !Array.isArray(symbols.astNodes) &&
+            (WALK_EXTENSIONS.has(ext) || AST_TYPE_MAPS.has(lid));
         const needsComplexity = doComplexity &&
-            COMPLEXITY_EXTENSIONS.has(ext) &&
+            (COMPLEXITY_EXTENSIONS.has(ext) || COMPLEXITY_RULES.has(lid)) &&
             defs.some((d) => hasFuncBody(d) && !d.complexity);
         const needsCfg = doCfg &&
-            CFG_EXTENSIONS.has(ext) &&
+            (CFG_EXTENSIONS.has(ext) || CFG_RULES.has(lid)) &&
             defs.some((d) => hasFuncBody(d) && d.cfg !== null && !Array.isArray(d.cfg?.blocks));
-        const needsDataflow = doDataflow && !symbols.dataflow && DATAFLOW_EXTENSIONS.has(ext);
+        const needsDataflow = doDataflow && !symbols.dataflow && (DATAFLOW_EXTENSIONS.has(ext) || DATAFLOW_RULES.has(lid));
         if (needsAst || needsComplexity || needsCfg || needsDataflow) {
             needsWasmTrees = true;
             break;
@@ -83,7 +243,7 @@ async function ensureWasmTreesIfNeeded(fileSymbols, opts, rootDir) {
             await ensureWasmTrees(fileSymbols, rootDir);
         }
         catch (err) {
-            debug(`ensureWasmTrees failed: ${err.message}`);
+            debug(`ensureWasmTrees failed: ${toErrorMessage(err)}`);
         }
     }
 }
@@ -131,9 +291,9 @@ function setupComplexityVisitorForFile(defs, langId, walkerOpts) {
     return visitor;
 }
 /** Set up CFG visitor if any definitions need WASM CFG analysis. */
-function setupCfgVisitorForFile(defs, langId, ext) {
+function setupCfgVisitorForFile(defs, langId) {
     const cfgRulesForLang = CFG_RULES.get(langId);
-    if (!cfgRulesForLang || !CFG_EXTENSIONS.has(ext))
+    if (!cfgRulesForLang)
         return null;
     const needsWasmCfg = defs.some((d) => hasFuncBody(d) && d.cfg !== null && !Array.isArray(d.cfg?.blocks));
     if (!needsWasmCfg)
@@ -155,12 +315,12 @@ function setupVisitors(db, relPath, symbols, langId, opts) {
     const complexityVisitor = opts.complexity !== false ? setupComplexityVisitorForFile(defs, langId, walkerOpts) : null;
     if (complexityVisitor)
         visitors.push(complexityVisitor);
-    const cfgVisitor = opts.cfg !== false ? setupCfgVisitorForFile(defs, langId, ext) : null;
+    const cfgVisitor = opts.cfg !== false ? setupCfgVisitorForFile(defs, langId) : null;
     if (cfgVisitor)
         visitors.push(cfgVisitor);
     let dataflowVisitor = null;
     const dfRules = DATAFLOW_RULES.get(langId);
-    if (opts.dataflow !== false && dfRules && DATAFLOW_EXTENSIONS.has(ext) && !symbols.dataflow) {
+    if (opts.dataflow !== false && dfRules && !symbols.dataflow) {
         dataflowVisitor = createDataflowVisitor(dfRules);
         visitors.push(dataflowVisitor);
     }
@@ -225,12 +385,8 @@ function storeCfgResults(results, defs) {
                 continue;
             def.cfg = { blocks: cfgResult.blocks, edges: cfgResult.edges };
             // Override complexity's cyclomatic with CFG-derived value (single source of truth)
-            if (def.complexity && cfgResult.cyclomatic != null) {
-                def.complexity.cyclomatic = cfgResult.cyclomatic;
-                const { loc, halstead } = def.complexity;
-                const volume = halstead ? halstead.volume : 0;
-                const commentRatio = loc && loc.loc > 0 ? loc.commentLines / loc.loc : 0;
-                def.complexity.maintainabilityIndex = computeMaintainabilityIndex(volume, cfgResult.cyclomatic, loc?.sloc ?? 0, commentRatio);
+            if (cfgResult.cyclomatic != null) {
+                overrideCyclomaticFromCfg(def, cfgResult.cyclomatic);
             }
         }
     }
@@ -244,7 +400,7 @@ async function delegateToBuildFunctions(db, fileSymbols, rootDir, opts, engineOp
             await buildAstNodes(db, fileSymbols, rootDir, engineOpts);
         }
         catch (err) {
-            debug(`buildAstNodes failed: ${err.message}`);
+            debug(`buildAstNodes failed: ${toErrorMessage(err)}`);
         }
         timing.astMs = performance.now() - t0;
     }
@@ -255,7 +411,7 @@ async function delegateToBuildFunctions(db, fileSymbols, rootDir, opts, engineOp
             await buildComplexityMetrics(db, fileSymbols, rootDir, engineOpts);
         }
         catch (err) {
-            debug(`buildComplexityMetrics failed: ${err.message}`);
+            debug(`buildComplexityMetrics failed: ${toErrorMessage(err)}`);
         }
         timing.complexityMs = performance.now() - t0;
     }
@@ -266,7 +422,7 @@ async function delegateToBuildFunctions(db, fileSymbols, rootDir, opts, engineOp
             await buildCFGData(db, fileSymbols, rootDir, engineOpts);
         }
         catch (err) {
-            debug(`buildCFGData failed: ${err.message}`);
+            debug(`buildCFGData failed: ${toErrorMessage(err)}`);
         }
         timing.cfgMs = performance.now() - t0;
     }
@@ -277,7 +433,7 @@ async function delegateToBuildFunctions(db, fileSymbols, rootDir, opts, engineOp
             await buildDataflowEdges(db, fileSymbols, rootDir, engineOpts);
         }
         catch (err) {
-            debug(`buildDataflowEdges failed: ${err.message}`);
+            debug(`buildDataflowEdges failed: ${toErrorMessage(err)}`);
         }
         timing.dataflowMs = performance.now() - t0;
     }
@@ -292,7 +448,16 @@ export async function runAnalyses(db, fileSymbols, rootDir, opts, engineOpts) {
     if (!doAst && !doComplexity && !doCfg && !doDataflow)
         return timing;
     const extToLang = buildExtToLangMap();
-    // WASM pre-parse for files that need it
+    // Native analysis pass: try Rust standalone functions before WASM fallback.
+    // This fills in complexity/CFG/dataflow for files that the native parse pipeline
+    // missed, avoiding the need to parse with WASM + run JS visitors.
+    const native = loadNative();
+    if (native?.analyzeComplexity ?? native?.buildCfgAnalysis ?? native?.extractDataflowAnalysis) {
+        const t0native = performance.now();
+        runNativeAnalysis(native, fileSymbols, rootDir, opts, extToLang);
+        debug(`native standalone analysis: ${(performance.now() - t0native).toFixed(1)}ms`);
+    }
+    // WASM pre-parse for files that still need it (AST store, or native gaps)
     await ensureWasmTreesIfNeeded(fileSymbols, opts, rootDir);
     // Unified pre-walk: run all applicable visitors in a single DFS per file
     const t0walk = performance.now();

package/dist/ast-analysis/engine.js.map

@@ -1 +1 @@
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package/dist/ast-analysis/metrics.d.ts

@@ -24,9 +24,6 @@ export declare function computeLOCMetrics(functionNode: TreeSitterNode, language
 /**
  * Compute normalized Maintainability Index (0-100 scale).
  *
- * Original SEI formula: MI = 171 - 5.2*ln(V) - 0.23*G - 16.2*ln(LOC) + 50*sin(sqrt(2.4*CM))
- * Microsoft normalization: max(0, min(100, MI * 100/171))
- *
  * @param {number} volume - Halstead volume
  * @param {number} cyclomatic - Cyclomatic complexity
  * @param {number} sloc - Source lines of code

package/dist/ast-analysis/metrics.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"metrics.d.ts","sourceRoot":"","sources":["../../src/ast-analysis/metrics.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,sBAAsB,EAAE,UAAU,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AAItF;;;;;;GAMG;AACH,wBAAgB,sBAAsB,CACpC,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC9B,QAAQ,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAC5B,sBAAsB,CA2BxB;AAmBD;;;;;;GAMG;AACH,wBAAgB,iBAAiB,CAAC,YAAY,EAAE,cAAc,EAAE,QAAQ,CAAC,EAAE,MAAM,GAAG,UAAU,CAoB7F;AAID;;;;;;;;;;;GAWG;AACH,wBAAgB,2BAA2B,CACzC,MAAM,EAAE,MAAM,EACd,UAAU,EAAE,MAAM,EAClB,IAAI,EAAE,MAAM,EACZ,YAAY,CAAC,EAAE,MAAM,GACpB,MAAM,CAYR"}
+{"version":3,"file":"metrics.d.ts","sourceRoot":"","sources":["../../src/ast-analysis/metrics.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,sBAAsB,EAAE,UAAU,EAAE,cAAc,EAAE,MAAM,aAAa,CAAC;AActF;;;;;;GAMG;AACH,wBAAgB,sBAAsB,CACpC,SAAS,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,EAC9B,QAAQ,EAAE,GAAG,CAAC,MAAM,EAAE,MAAM,CAAC,GAC5B,sBAAsB,CAyBxB;AAmBD;;;;;;GAMG;AACH,wBAAgB,iBAAiB,CAAC,YAAY,EAAE,cAAc,EAAE,QAAQ,CAAC,EAAE,MAAM,GAAG,UAAU,CAoB7F;AAiBD;;;;;;;;GAQG;AACH,wBAAgB,2BAA2B,CACzC,MAAM,EAAE,MAAM,EACd,UAAU,EAAE,MAAM,EAClB,IAAI,EAAE,MAAM,EACZ,YAAY,CAAC,EAAE,MAAM,GACpB,MAAM,CAgBR"}

package/dist/ast-analysis/metrics.js

@@ -5,6 +5,15 @@
  * all stateless math that can be reused by visitor-based and standalone paths.
  */
 // ─── Halstead Derived Metrics ─────────────────────────────────────────────
+/** Halstead delivered-bugs denominator (industry standard: V / 3000). */
+const HALSTEAD_BUGS_DIVISOR = 3000;
+/** Sum all values in a count map. */
+function sumCounts(map) {
+    let total = 0;
+    for (const c of map.values())
+        total += c;
+    return total;
+}
 /**
  * Compute Halstead derived metrics from raw operator/operand counts.
  *
@@ -15,18 +24,14 @@
 export function computeHalsteadDerived(operators, operands) {
     const n1 = operators.size;
     const n2 = operands.size;
-    let bigN1 = 0;
-    for (const c of operators.values())
-        bigN1 += c;
-    let bigN2 = 0;
-    for (const c of operands.values())
-        bigN2 += c;
+    const bigN1 = sumCounts(operators);
+    const bigN2 = sumCounts(operands);
     const vocabulary = n1 + n2;
     const length = bigN1 + bigN2;
     const volume = vocabulary > 0 ? length * Math.log2(vocabulary) : 0;
     const difficulty = n2 > 0 ? (n1 / 2) * (bigN2 / n2) : 0;
     const effort = difficulty * volume;
-    const bugs = volume / 3000;
+    const bugs = volume / HALSTEAD_BUGS_DIVISOR;
     return {
         n1,
         n2,
@@ -82,10 +87,19 @@ export function computeLOCMetrics(functionNode, language) {
 }
 // ─── Maintainability Index ────────────────────────────────────────────────
 /**
- * Compute normalized Maintainability Index (0-100 scale).
- *
- * Original SEI formula: MI = 171 - 5.2*ln(V) - 0.23*G - 16.2*ln(LOC) + 50*sin(sqrt(2.4*CM))
+ * SEI Maintainability Index formula coefficients.
+ * Original: MI = 171 - 5.2*ln(V) - 0.23*G - 16.2*ln(LOC) + 50*sin(sqrt(2.4*CM))
  * Microsoft normalization: max(0, min(100, MI * 100/171))
+ */
+const MI_BASE = 171;
+const MI_VOLUME_COEFF = 5.2;
+const MI_CYCLOMATIC_COEFF = 0.23;
+const MI_LOC_COEFF = 16.2;
+const MI_COMMENT_AMPLITUDE = 50;
+const MI_COMMENT_SCALE = 2.4;
+const MI_NORMALIZE_SCALE = 100;
+/**
+ * Compute normalized Maintainability Index (0-100 scale).
  *
  * @param {number} volume - Halstead volume
  * @param {number} cyclomatic - Cyclomatic complexity
@@ -96,11 +110,14 @@ export function computeLOCMetrics(functionNode, language) {
 export function computeMaintainabilityIndex(volume, cyclomatic, sloc, commentRatio) {
     const safeVolume = Math.max(volume, 1);
     const safeSLOC = Math.max(sloc, 1);
-    let mi = 171 - 5.2 * Math.log(safeVolume) - 0.23 * cyclomatic - 16.2 * Math.log(safeSLOC);
+    let mi = MI_BASE -
+        MI_VOLUME_COEFF * Math.log(safeVolume) -
+        MI_CYCLOMATIC_COEFF * cyclomatic -
+        MI_LOC_COEFF * Math.log(safeSLOC);
     if (commentRatio != null && commentRatio > 0) {
-        mi += 50 * Math.sin(Math.sqrt(2.4 * commentRatio));
+        mi += MI_COMMENT_AMPLITUDE * Math.sin(Math.sqrt(MI_COMMENT_SCALE * commentRatio));
     }
-    const normalized = Math.max(0, Math.min(100, (mi * 100) / 171));
+    const normalized = Math.max(0, Math.min(MI_NORMALIZE_SCALE, (mi * MI_NORMALIZE_SCALE) / MI_BASE));
     return +normalized.toFixed(1);
 }
 //# sourceMappingURL=metrics.js.map

package/dist/ast-analysis/metrics.js.map

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package/dist/ast-analysis/rules/javascript.d.ts.map

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