@nfdi4plants/arctrl 3.0.0-beta.9 → 3.0.1

package/dist/ts/ts/WorkflowGraph/GraphTypes.d.ts

@@ -0,0 +1,182 @@
+import { Record, Union } from '@fable-org/fable-library-js/Types.js';
+import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { Option } from '@fable-org/fable-library-js/Option.js';
+import { IComparable, IEquatable } from '@fable-org/fable-library-js/Util.js';
+import { DynamicObj } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
+import { int32 } from '@fable-org/fable-library-js/Int32.js';
+import { FSharpResult$2_$union } from '@fable-org/fable-library-js/Result.js';
+export type ProcessingUnitKind_$union = ProcessingUnitKind<0> | ProcessingUnitKind<1> | ProcessingUnitKind<2> | ProcessingUnitKind<3> | ProcessingUnitKind<4> | ProcessingUnitKind<5>;
+export type ProcessingUnitKind_$cases = {
+    0: ["Workflow", []];
+    1: ["CommandLineTool", []];
+    2: ["ExpressionTool", []];
+    3: ["Operation", []];
+    4: ["ExternalReference", []];
+    5: ["UnresolvedReference", []];
+};
+export declare function ProcessingUnitKind_Workflow(): ProcessingUnitKind<0>;
+export declare function ProcessingUnitKind_CommandLineTool(): ProcessingUnitKind<1>;
+export declare function ProcessingUnitKind_ExpressionTool(): ProcessingUnitKind<2>;
+export declare function ProcessingUnitKind_Operation(): ProcessingUnitKind<3>;
+export declare function ProcessingUnitKind_ExternalReference(): ProcessingUnitKind<4>;
+export declare function ProcessingUnitKind_UnresolvedReference(): ProcessingUnitKind<5>;
+export declare class ProcessingUnitKind<Tag extends keyof ProcessingUnitKind_$cases> extends Union<Tag, ProcessingUnitKind_$cases[Tag][0]> {
+    readonly tag: Tag;
+    readonly fields: ProcessingUnitKind_$cases[Tag][1];
+    constructor(tag: Tag, fields: ProcessingUnitKind_$cases[Tag][1]);
+    cases(): string[];
+}
+export declare function ProcessingUnitKind_$reflection(): TypeInfo;
+export type PortDirection_$union = PortDirection<0> | PortDirection<1>;
+export type PortDirection_$cases = {
+    0: ["Input", []];
+    1: ["Output", []];
+};
+export declare function PortDirection_Input(): PortDirection<0>;
+export declare function PortDirection_Output(): PortDirection<1>;
+export declare class PortDirection<Tag extends keyof PortDirection_$cases> extends Union<Tag, PortDirection_$cases[Tag][0]> {
+    readonly tag: Tag;
+    readonly fields: PortDirection_$cases[Tag][1];
+    constructor(tag: Tag, fields: PortDirection_$cases[Tag][1]);
+    cases(): string[];
+}
+export declare function PortDirection_$reflection(): TypeInfo;
+export type NodeKind_$union = NodeKind<0> | NodeKind<1> | NodeKind<2>;
+export type NodeKind_$cases = {
+    0: ["ProcessingUnitNode", [ProcessingUnitKind_$union]];
+    1: ["StepNode", []];
+    2: ["PortNode", [PortDirection_$union]];
+};
+export declare function NodeKind_ProcessingUnitNode(Item: ProcessingUnitKind_$union): NodeKind<0>;
+export declare function NodeKind_StepNode(): NodeKind<1>;
+export declare function NodeKind_PortNode(Item: PortDirection_$union): NodeKind<2>;
+export declare class NodeKind<Tag extends keyof NodeKind_$cases> extends Union<Tag, NodeKind_$cases[Tag][0]> {
+    readonly tag: Tag;
+    readonly fields: NodeKind_$cases[Tag][1];
+    constructor(tag: Tag, fields: NodeKind_$cases[Tag][1]);
+    cases(): string[];
+}
+export declare function NodeKind_$reflection(): TypeInfo;
+export type EdgeKind_$union = EdgeKind<0> | EdgeKind<1> | EdgeKind<2> | EdgeKind<3> | EdgeKind<4>;
+export type EdgeKind_$cases = {
+    0: ["Contains", []];
+    1: ["Calls", []];
+    2: ["BindsWorkflowInput", []];
+    3: ["DataFlow", []];
+    4: ["BindsWorkflowOutput", []];
+};
+export declare function EdgeKind_Contains(): EdgeKind<0>;
+export declare function EdgeKind_Calls(): EdgeKind<1>;
+export declare function EdgeKind_BindsWorkflowInput(): EdgeKind<2>;
+export declare function EdgeKind_DataFlow(): EdgeKind<3>;
+export declare function EdgeKind_BindsWorkflowOutput(): EdgeKind<4>;
+export declare class EdgeKind<Tag extends keyof EdgeKind_$cases> extends Union<Tag, EdgeKind_$cases[Tag][0]> {
+    readonly tag: Tag;
+    readonly fields: EdgeKind_$cases[Tag][1];
+    constructor(tag: Tag, fields: EdgeKind_$cases[Tag][1]);
+    cases(): string[];
+}
+export declare function EdgeKind_$reflection(): TypeInfo;
+export type GraphIssueKind_$union = GraphIssueKind<0> | GraphIssueKind<1> | GraphIssueKind<2> | GraphIssueKind<3> | GraphIssueKind<4> | GraphIssueKind<5>;
+export type GraphIssueKind_$cases = {
+    0: ["MissingReference", []];
+    1: ["InvalidReference", []];
+    2: ["ResolutionFailed", []];
+    3: ["CycleDetected", []];
+    4: ["MissingCwlDescription", []];
+    5: ["UnexpectedRuntimeType", []];
+};
+export declare function GraphIssueKind_MissingReference(): GraphIssueKind<0>;
+export declare function GraphIssueKind_InvalidReference(): GraphIssueKind<1>;
+export declare function GraphIssueKind_ResolutionFailed(): GraphIssueKind<2>;
+export declare function GraphIssueKind_CycleDetected(): GraphIssueKind<3>;
+export declare function GraphIssueKind_MissingCwlDescription(): GraphIssueKind<4>;
+export declare function GraphIssueKind_UnexpectedRuntimeType(): GraphIssueKind<5>;
+export declare class GraphIssueKind<Tag extends keyof GraphIssueKind_$cases> extends Union<Tag, GraphIssueKind_$cases[Tag][0]> {
+    readonly tag: Tag;
+    readonly fields: GraphIssueKind_$cases[Tag][1];
+    constructor(tag: Tag, fields: GraphIssueKind_$cases[Tag][1]);
+    cases(): string[];
+}
+export declare function GraphIssueKind_$reflection(): TypeInfo;
+export declare class GraphBuildIssue extends Record implements IEquatable<GraphBuildIssue>, IComparable<GraphBuildIssue> {
+    readonly Kind: GraphIssueKind_$union;
+    readonly Message: string;
+    readonly Scope: Option<string>;
+    readonly Reference: Option<string>;
+    constructor(Kind: GraphIssueKind_$union, Message: string, Scope: Option<string>, Reference: Option<string>);
+}
+export declare function GraphBuildIssue_$reflection(): TypeInfo;
+export declare function GraphBuildIssue_create_Z2F3B511A(kind: GraphIssueKind_$union, message: string, scope?: string, reference?: string): GraphBuildIssue;
+export declare class WorkflowGraphNode extends Record implements IEquatable<WorkflowGraphNode> {
+    readonly Id: string;
+    readonly Kind: NodeKind_$union;
+    readonly Label: string;
+    readonly OwnerNodeId: Option<string>;
+    readonly Reference: Option<string>;
+    readonly Metadata: Option<DynamicObj>;
+    constructor(Id: string, Kind: NodeKind_$union, Label: string, OwnerNodeId: Option<string>, Reference: Option<string>, Metadata: Option<DynamicObj>);
+}
+export declare function WorkflowGraphNode_$reflection(): TypeInfo;
+export declare function WorkflowGraphNode_create_62C775C0(id: string, kind: NodeKind_$union, label: string, ownerNodeId?: string, reference?: string, metadata?: DynamicObj): WorkflowGraphNode;
+export declare class WorkflowGraphEdge extends Record implements IEquatable<WorkflowGraphEdge>, IComparable<WorkflowGraphEdge> {
+    readonly Id: string;
+    readonly SourceNodeId: string;
+    readonly TargetNodeId: string;
+    readonly Kind: EdgeKind_$union;
+    readonly Label: Option<string>;
+    constructor(Id: string, SourceNodeId: string, TargetNodeId: string, Kind: EdgeKind_$union, Label: Option<string>);
+}
+export declare function WorkflowGraphEdge_$reflection(): TypeInfo;
+export declare function WorkflowGraphEdge_create_5E4B5E48(id: string, sourceNodeId: string, targetNodeId: string, kind: EdgeKind_$union, label?: string): WorkflowGraphEdge;
+export declare class WorkflowGraph extends Record implements IEquatable<WorkflowGraph> {
+    readonly RootProcessingUnitNodeId: string;
+    readonly Nodes: WorkflowGraphNode[];
+    readonly Edges: WorkflowGraphEdge[];
+    readonly Diagnostics: GraphBuildIssue[];
+    constructor(RootProcessingUnitNodeId: string, Nodes: WorkflowGraphNode[], Edges: WorkflowGraphEdge[], Diagnostics: GraphBuildIssue[]);
+}
+export declare function WorkflowGraph_$reflection(): TypeInfo;
+export declare function WorkflowGraph_create_4D231A1(rootProcessingUnitNodeId: string, nodes?: WorkflowGraphNode[], edges?: WorkflowGraphEdge[], diagnostics?: GraphBuildIssue[]): WorkflowGraph;
+export declare function WorkflowGraph__get_NodeCount(this$: WorkflowGraph): int32;
+export declare function WorkflowGraph__get_EdgeCount(this$: WorkflowGraph): int32;
+export declare class WorkflowGraphIndex extends Record implements IEquatable<WorkflowGraphIndex> {
+    readonly WorkflowGraphs: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][];
+    readonly RunGraphs: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][];
+    constructor(WorkflowGraphs: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][], RunGraphs: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][]);
+}
+export declare function WorkflowGraphIndex_$reflection(): TypeInfo;
+export declare function WorkflowGraphIndex_create_56E060E0(workflowGraphs?: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][], runGraphs?: [string, FSharpResult$2_$union<WorkflowGraph, GraphBuildIssue>][]): WorkflowGraphIndex;
+/**
+ * Returns a string key representation for an EdgeKind.
+ */
+export declare function EdgeKindModule_asKey(kind: EdgeKind_$union): string;
+/**
+ * Returns "in" for Input and "out" for Output.
+ */
+export declare function PortDirectionModule_asKey(direction: PortDirection_$union): string;
+/**
+ * Trims and normalizes a path segment for use in graph IDs.
+ */
+export declare function GraphId_normalizeSegment(value: string): string;
+/**
+ * Combines a parent scope and child into a normalized hierarchical path.
+ */
+export declare function GraphId_childScope(scope: string, child: string): string;
+/**
+ * Creates a processing unit node ID with the format "unit:{scope}".
+ */
+export declare function GraphId_unitNodeId(scope: string): string;
+/**
+ * Creates a step node ID with the format "step:{scope}/{stepId}".
+ */
+export declare function GraphId_stepNodeId(scope: string, stepId: string): string;
+/**
+ * Creates a port node ID with the format "port:{ownerNodeId}/{in|out}/{portId}".
+ */
+export declare function GraphId_portNodeId(ownerNodeId: string, direction: PortDirection_$union, portId: string): string;
+/**
+ * Creates an edge ID with the format "edge:{kind}:{source}->{target}".
+ */
+export declare function GraphId_edgeId(kind: EdgeKind_$union, sourceNodeId: string, targetNodeId: string): string;
+//# sourceMappingURL=GraphTypes.d.ts.map

package/dist/ts/ts/WorkflowGraph/GraphTypes.d.ts.map

@@ -0,0 +1 @@
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package/dist/ts/ts/WorkflowGraph/GraphTypes.js

@@ -0,0 +1,281 @@
+import { Union, Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { union_type, record_type, string_type, option_type, array_type, tuple_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { defaultArg } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { DynamicObj_$reflection } from '../fable_modules/DynamicObj.7.1.0/DynamicObj.fs.js';
+import { FSharpResult$2 } from '../../node_modules/@fable-org/fable-library-js/Result.js';
+import { isNullOrWhiteSpace } from '../../node_modules/@fable-org/fable-library-js/String.js';
+import { normalizePathKey, combine } from '../FileSystem/Path.js';
+
+function ProcessingUnitKind_Workflow() {
+  return new ProcessingUnitKind(0, []);
+}
+function ProcessingUnitKind_CommandLineTool() {
+  return new ProcessingUnitKind(1, []);
+}
+function ProcessingUnitKind_ExpressionTool() {
+  return new ProcessingUnitKind(2, []);
+}
+function ProcessingUnitKind_Operation() {
+  return new ProcessingUnitKind(3, []);
+}
+function ProcessingUnitKind_ExternalReference() {
+  return new ProcessingUnitKind(4, []);
+}
+function ProcessingUnitKind_UnresolvedReference() {
+  return new ProcessingUnitKind(5, []);
+}
+class ProcessingUnitKind extends Union {
+  constructor(tag, fields) {
+    super();
+    this.tag = tag;
+    this.fields = fields;
+  }
+  cases() {
+    return ["Workflow", "CommandLineTool", "ExpressionTool", "Operation", "ExternalReference", "UnresolvedReference"];
+  }
+}
+function ProcessingUnitKind_$reflection() {
+  return union_type("ARCtrl.WorkflowGraph.ProcessingUnitKind", [], ProcessingUnitKind, () => [[], [], [], [], [], []]);
+}
+function PortDirection_Input() {
+  return new PortDirection(0, []);
+}
+function PortDirection_Output() {
+  return new PortDirection(1, []);
+}
+class PortDirection extends Union {
+  constructor(tag, fields) {
+    super();
+    this.tag = tag;
+    this.fields = fields;
+  }
+  cases() {
+    return ["Input", "Output"];
+  }
+}
+function PortDirection_$reflection() {
+  return union_type("ARCtrl.WorkflowGraph.PortDirection", [], PortDirection, () => [[], []]);
+}
+function NodeKind_ProcessingUnitNode(Item) {
+  return new NodeKind(0, [Item]);
+}
+function NodeKind_StepNode() {
+  return new NodeKind(1, []);
+}
+function NodeKind_PortNode(Item) {
+  return new NodeKind(2, [Item]);
+}
+class NodeKind extends Union {
+  constructor(tag, fields) {
+    super();
+    this.tag = tag;
+    this.fields = fields;
+  }
+  cases() {
+    return ["ProcessingUnitNode", "StepNode", "PortNode"];
+  }
+}
+function NodeKind_$reflection() {
+  return union_type("ARCtrl.WorkflowGraph.NodeKind", [], NodeKind, () => [[["Item", ProcessingUnitKind_$reflection()]], [], [["Item", PortDirection_$reflection()]]]);
+}
+function EdgeKind_Contains() {
+  return new EdgeKind(0, []);
+}
+function EdgeKind_Calls() {
+  return new EdgeKind(1, []);
+}
+function EdgeKind_BindsWorkflowInput() {
+  return new EdgeKind(2, []);
+}
+function EdgeKind_DataFlow() {
+  return new EdgeKind(3, []);
+}
+function EdgeKind_BindsWorkflowOutput() {
+  return new EdgeKind(4, []);
+}
+class EdgeKind extends Union {
+  constructor(tag, fields) {
+    super();
+    this.tag = tag;
+    this.fields = fields;
+  }
+  cases() {
+    return ["Contains", "Calls", "BindsWorkflowInput", "DataFlow", "BindsWorkflowOutput"];
+  }
+}
+function EdgeKind_$reflection() {
+  return union_type("ARCtrl.WorkflowGraph.EdgeKind", [], EdgeKind, () => [[], [], [], [], []]);
+}
+function GraphIssueKind_MissingReference() {
+  return new GraphIssueKind(0, []);
+}
+function GraphIssueKind_InvalidReference() {
+  return new GraphIssueKind(1, []);
+}
+function GraphIssueKind_ResolutionFailed() {
+  return new GraphIssueKind(2, []);
+}
+function GraphIssueKind_CycleDetected() {
+  return new GraphIssueKind(3, []);
+}
+function GraphIssueKind_MissingCwlDescription() {
+  return new GraphIssueKind(4, []);
+}
+function GraphIssueKind_UnexpectedRuntimeType() {
+  return new GraphIssueKind(5, []);
+}
+class GraphIssueKind extends Union {
+  constructor(tag, fields) {
+    super();
+    this.tag = tag;
+    this.fields = fields;
+  }
+  cases() {
+    return ["MissingReference", "InvalidReference", "ResolutionFailed", "CycleDetected", "MissingCwlDescription", "UnexpectedRuntimeType"];
+  }
+}
+function GraphIssueKind_$reflection() {
+  return union_type("ARCtrl.WorkflowGraph.GraphIssueKind", [], GraphIssueKind, () => [[], [], [], [], [], []]);
+}
+class GraphBuildIssue extends Record {
+  constructor(Kind, Message, Scope, Reference) {
+    super();
+    this.Kind = Kind;
+    this.Message = Message;
+    this.Scope = Scope;
+    this.Reference = Reference;
+  }
+}
+function GraphBuildIssue_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.GraphBuildIssue", [], GraphBuildIssue, () => [["Kind", GraphIssueKind_$reflection()], ["Message", string_type], ["Scope", option_type(string_type)], ["Reference", option_type(string_type)]]);
+}
+function GraphBuildIssue_create_Z2F3B511A(kind, message, scope, reference) {
+  return new GraphBuildIssue(kind, message, scope, reference);
+}
+class WorkflowGraphNode extends Record {
+  constructor(Id, Kind, Label, OwnerNodeId, Reference, Metadata) {
+    super();
+    this.Id = Id;
+    this.Kind = Kind;
+    this.Label = Label;
+    this.OwnerNodeId = OwnerNodeId;
+    this.Reference = Reference;
+    this.Metadata = Metadata;
+  }
+}
+function WorkflowGraphNode_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.WorkflowGraphNode", [], WorkflowGraphNode, () => [["Id", string_type], ["Kind", NodeKind_$reflection()], ["Label", string_type], ["OwnerNodeId", option_type(string_type)], ["Reference", option_type(string_type)], ["Metadata", option_type(DynamicObj_$reflection())]]);
+}
+function WorkflowGraphNode_create_62C775C0(id, kind, label, ownerNodeId, reference, metadata) {
+  return new WorkflowGraphNode(id, kind, label, ownerNodeId, reference, metadata);
+}
+class WorkflowGraphEdge extends Record {
+  constructor(Id, SourceNodeId, TargetNodeId, Kind, Label) {
+    super();
+    this.Id = Id;
+    this.SourceNodeId = SourceNodeId;
+    this.TargetNodeId = TargetNodeId;
+    this.Kind = Kind;
+    this.Label = Label;
+  }
+}
+function WorkflowGraphEdge_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.WorkflowGraphEdge", [], WorkflowGraphEdge, () => [["Id", string_type], ["SourceNodeId", string_type], ["TargetNodeId", string_type], ["Kind", EdgeKind_$reflection()], ["Label", option_type(string_type)]]);
+}
+function WorkflowGraphEdge_create_5E4B5E48(id, sourceNodeId, targetNodeId, kind, label) {
+  return new WorkflowGraphEdge(id, sourceNodeId, targetNodeId, kind, label);
+}
+class WorkflowGraph extends Record {
+  constructor(RootProcessingUnitNodeId, Nodes, Edges, Diagnostics) {
+    super();
+    this.RootProcessingUnitNodeId = RootProcessingUnitNodeId;
+    this.Nodes = Nodes;
+    this.Edges = Edges;
+    this.Diagnostics = Diagnostics;
+  }
+}
+function WorkflowGraph_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.WorkflowGraph", [], WorkflowGraph, () => [["RootProcessingUnitNodeId", string_type], ["Nodes", array_type(WorkflowGraphNode_$reflection())], ["Edges", array_type(WorkflowGraphEdge_$reflection())], ["Diagnostics", array_type(GraphBuildIssue_$reflection())]]);
+}
+function WorkflowGraph_create_4D231A1(rootProcessingUnitNodeId, nodes, edges, diagnostics) {
+  return new WorkflowGraph(rootProcessingUnitNodeId, defaultArg(nodes, []), defaultArg(edges, []), defaultArg(diagnostics, []));
+}
+function WorkflowGraph__get_NodeCount(this$) {
+  return this$.Nodes.length;
+}
+function WorkflowGraph__get_EdgeCount(this$) {
+  return this$.Edges.length;
+}
+class WorkflowGraphIndex extends Record {
+  constructor(WorkflowGraphs, RunGraphs) {
+    super();
+    this.WorkflowGraphs = WorkflowGraphs;
+    this.RunGraphs = RunGraphs;
+  }
+}
+function WorkflowGraphIndex_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.WorkflowGraphIndex", [], WorkflowGraphIndex, () => [["WorkflowGraphs", array_type(tuple_type(string_type, union_type("Microsoft.FSharp.Core.FSharpResult`2", [WorkflowGraph_$reflection(), GraphBuildIssue_$reflection()], FSharpResult$2, () => [[["ResultValue", WorkflowGraph_$reflection()]], [["ErrorValue", GraphBuildIssue_$reflection()]]])))], ["RunGraphs", array_type(tuple_type(string_type, union_type("Microsoft.FSharp.Core.FSharpResult`2", [WorkflowGraph_$reflection(), GraphBuildIssue_$reflection()], FSharpResult$2, () => [[["ResultValue", WorkflowGraph_$reflection()]], [["ErrorValue", GraphBuildIssue_$reflection()]]])))]]);
+}
+function WorkflowGraphIndex_create_56E060E0(workflowGraphs, runGraphs) {
+  return new WorkflowGraphIndex(defaultArg(workflowGraphs, []), defaultArg(runGraphs, []));
+}
+function EdgeKindModule_asKey(kind) {
+  switch (kind.tag) {
+    case /* Calls */
+    1:
+      return "calls";
+    case /* BindsWorkflowInput */
+    2:
+      return "binds_workflow_input";
+    case /* DataFlow */
+    3:
+      return "dataflow";
+    case /* BindsWorkflowOutput */
+    4:
+      return "binds_workflow_output";
+    default:
+      return "contains";
+  }
+}
+function PortDirectionModule_asKey(direction) {
+  if (direction.tag === /* Output */
+  1) {
+    return "out";
+  } else {
+    return "in";
+  }
+}
+function GraphId_normalizeSegment(value) {
+  if (isNullOrWhiteSpace(value)) {
+    return "";
+  } else {
+    return normalizePathKey(value.trim());
+  }
+}
+function GraphId_childScope(scope, child) {
+  const normalizedScope = GraphId_normalizeSegment(scope);
+  const normalizedChild = GraphId_normalizeSegment(child);
+  if (isNullOrWhiteSpace(normalizedScope)) {
+    return normalizedChild;
+  } else if (isNullOrWhiteSpace(normalizedChild)) {
+    return normalizedScope;
+  } else {
+    return normalizePathKey(combine(normalizedScope, normalizedChild));
+  }
+}
+function GraphId_unitNodeId(scope) {
+  return `unit:${GraphId_normalizeSegment(scope)}`;
+}
+function GraphId_stepNodeId(scope, stepId) {
+  const normalizedStepId = GraphId_normalizeSegment(stepId);
+  return `step:${GraphId_normalizeSegment(scope)}/${normalizedStepId}`;
+}
+function GraphId_portNodeId(ownerNodeId, direction, portId) {
+  const normalizedPortId = GraphId_normalizeSegment(portId);
+  return `port:${ownerNodeId}/${PortDirectionModule_asKey(direction)}/${normalizedPortId}`;
+}
+function GraphId_edgeId(kind, sourceNodeId, targetNodeId) {
+  return `edge:${EdgeKindModule_asKey(kind)}:${sourceNodeId}->${targetNodeId}`;
+}
+
+export { EdgeKind, EdgeKindModule_asKey, EdgeKind_$reflection, EdgeKind_BindsWorkflowInput, EdgeKind_BindsWorkflowOutput, EdgeKind_Calls, EdgeKind_Contains, EdgeKind_DataFlow, GraphBuildIssue, GraphBuildIssue_$reflection, GraphBuildIssue_create_Z2F3B511A, GraphId_childScope, GraphId_edgeId, GraphId_normalizeSegment, GraphId_portNodeId, GraphId_stepNodeId, GraphId_unitNodeId, GraphIssueKind, GraphIssueKind_$reflection, GraphIssueKind_CycleDetected, GraphIssueKind_InvalidReference, GraphIssueKind_MissingCwlDescription, GraphIssueKind_MissingReference, GraphIssueKind_ResolutionFailed, GraphIssueKind_UnexpectedRuntimeType, NodeKind, NodeKind_$reflection, NodeKind_PortNode, NodeKind_ProcessingUnitNode, NodeKind_StepNode, PortDirection, PortDirectionModule_asKey, PortDirection_$reflection, PortDirection_Input, PortDirection_Output, ProcessingUnitKind, ProcessingUnitKind_$reflection, ProcessingUnitKind_CommandLineTool, ProcessingUnitKind_ExpressionTool, ProcessingUnitKind_ExternalReference, ProcessingUnitKind_Operation, ProcessingUnitKind_UnresolvedReference, ProcessingUnitKind_Workflow, WorkflowGraph, WorkflowGraphEdge, WorkflowGraphEdge_$reflection, WorkflowGraphEdge_create_5E4B5E48, WorkflowGraphIndex, WorkflowGraphIndex_$reflection, WorkflowGraphIndex_create_56E060E0, WorkflowGraphNode, WorkflowGraphNode_$reflection, WorkflowGraphNode_create_62C775C0, WorkflowGraph_$reflection, WorkflowGraph__get_EdgeCount, WorkflowGraph__get_NodeCount, WorkflowGraph_create_4D231A1 };

package/dist/ts/ts/WorkflowGraph/ReferenceParsing.d.ts

@@ -0,0 +1,27 @@
+import { Record } from '@fable-org/fable-library-js/Types.js';
+import { Option } from '@fable-org/fable-library-js/Option.js';
+import { IComparable, IEquatable } from '@fable-org/fable-library-js/Util.js';
+import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
+import { StepOutput_$union } from '../CWL/WorkflowSteps.js';
+export declare class ParsedSourceReference extends Record implements IEquatable<ParsedSourceReference>, IComparable<ParsedSourceReference> {
+    readonly StepId: Option<string>;
+    readonly PortId: string;
+    readonly Raw: string;
+    constructor(StepId: Option<string>, PortId: string, Raw: string);
+}
+export declare function ParsedSourceReference_$reflection(): TypeInfo;
+/**
+ * Strips a leading '#' prefix from a CWL reference string.
+ */
+export declare function ReferenceParsing_trimHashPrefix(value: string): string;
+/**
+ * Parses a CWL source reference string into its step and port components.
+ * A reference like "step1/output_file" is parsed into StepId=Some "step1", PortId="output_file".
+ * A simple reference like "input_file" is parsed into StepId=None, PortId="input_file".
+ */
+export declare function ReferenceParsing_parseSourceReference(source: string): ParsedSourceReference;
+/**
+ * Extracts the output ID string from a StepOutput discriminated union value.
+ */
+export declare function ReferenceParsing_extractStepOutputId(output: StepOutput_$union): string;
+//# sourceMappingURL=ReferenceParsing.d.ts.map

package/dist/ts/ts/WorkflowGraph/ReferenceParsing.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"ReferenceParsing.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/WorkflowGraph/ReferenceParsing.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,MAAM,sCAAsC,CAAC;AAC9D,OAAO,EAA0B,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACvF,OAAO,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,qCAAqC,CAAC;AAC9E,OAAO,EAAyC,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAG5G,OAAO,EAAE,iBAAiB,EAAE,MAAM,yBAAyB,CAAC;AAE5D,qBAAa,qBAAsB,SAAQ,MAAO,YAAW,UAAU,CAAC,qBAAqB,CAAC,EAAE,WAAW,CAAC,qBAAqB,CAAC;IAC9H,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,CAAC;IAChC,QAAQ,CAAC,MAAM,EAAE,MAAM,CAAC;IACxB,QAAQ,CAAC,GAAG,EAAE,MAAM,CAAC;gBACT,MAAM,EAAE,MAAM,CAAC,MAAM,CAAC,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM;CAMlE;AAED,wBAAgB,iCAAiC,IAAI,QAAQ,CAE5D;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,KAAK,EAAE,MAAM,GAAG,MAAM,CAQrE;AAED;;;;GAIG;AACH,wBAAgB,qCAAqC,CAAC,MAAM,EAAE,MAAM,GAAG,qBAAqB,CAgB3F;AAED;;GAEG;AACH,wBAAgB,oCAAoC,CAAC,MAAM,EAAE,iBAAiB,GAAG,MAAM,CAOtF"}

package/dist/ts/ts/WorkflowGraph/ReferenceParsing.js

@@ -0,0 +1,49 @@
+import { Record } from '../../node_modules/@fable-org/fable-library-js/Types.js';
+import { defaultArg, ofNullable } from '../../node_modules/@fable-org/fable-library-js/Option.js';
+import { record_type, option_type, string_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
+import { substring, isNullOrWhiteSpace } from '../../node_modules/@fable-org/fable-library-js/String.js';
+
+class ParsedSourceReference extends Record {
+  constructor(StepId, PortId, Raw) {
+    super();
+    this.StepId = StepId;
+    this.PortId = PortId;
+    this.Raw = Raw;
+  }
+}
+function ParsedSourceReference_$reflection() {
+  return record_type("ARCtrl.WorkflowGraph.ParsedSourceReference", [], ParsedSourceReference, () => [["StepId", option_type(string_type)], ["PortId", string_type], ["Raw", string_type]]);
+}
+function ReferenceParsing_trimHashPrefix(value) {
+  const trimmed = value.trim();
+  if (trimmed.startsWith("#")) {
+    return substring(trimmed, 1);
+  } else {
+    return trimmed;
+  }
+}
+function ReferenceParsing_parseSourceReference(source) {
+  if (isNullOrWhiteSpace(source)) {
+    return new ParsedSourceReference(void 0, "", defaultArg(ofNullable(source), ""));
+  } else {
+    const normalized = ReferenceParsing_trimHashPrefix(source);
+    const separatorIndex = normalized.indexOf("/") | 0;
+    if (separatorIndex < 0) {
+      return new ParsedSourceReference(void 0, normalized, source);
+    } else {
+      const stepId = substring(normalized, 0, separatorIndex).trim();
+      const portId = substring(normalized, separatorIndex + 1).trim();
+      return new ParsedSourceReference(isNullOrWhiteSpace(stepId) ? void 0 : stepId, portId, source);
+    }
+  }
+}
+function ReferenceParsing_extractStepOutputId(output) {
+  if (output.tag === /* StepOutputRecord */
+  1) {
+    return output.fields[0].Id;
+  } else {
+    return output.fields[0];
+  }
+}
+
+export { ParsedSourceReference, ParsedSourceReference_$reflection, ReferenceParsing_extractStepOutputId, ReferenceParsing_parseSourceReference, ReferenceParsing_trimHashPrefix };

package/dist/ts/ts/Xlsx.d.ts

@@ -1,14 +1,14 @@
 import { FsWorkbook } from './fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorkbook.fs.js';
-import { DataMap } from './Core/DataMap.js';
+import { Datamap } from './Core/Datamap.js';
 import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
 import { ArcInvestigation, ArcRun, ArcWorkflow, ArcStudy, ArcAssay } from './Core/ArcTypes.js';
 import { FSharpList } from '@fable-org/fable-library-js/List.js';
 export declare class XlsxHelper_DatamapXlsx {
     constructor();
-    fromFsWorkbook(fswb: FsWorkbook): DataMap;
-    toFsWorkbook(datamap: DataMap): FsWorkbook;
-    fromXlsxFileAsync(path: string): Promise<DataMap>;
-    toXlsxFileAsync(path: string, datamap: DataMap): Promise<void>;
+    fromFsWorkbook(fswb: FsWorkbook): Datamap;
+    toFsWorkbook(datamap: Datamap): FsWorkbook;
+    fromXlsxFileAsync(path: string): Promise<Datamap>;
+    toXlsxFileAsync(path: string, datamap: Datamap): Promise<void>;
 }
 export declare function XlsxHelper_DatamapXlsx_$reflection(): TypeInfo;
 export declare function XlsxHelper_DatamapXlsx_$ctor(): XlsxHelper_DatamapXlsx;

package/dist/ts/ts/Xlsx.js

@@ -1,4 +1,4 @@
-import { fromFsWorkbook, toFsWorkbook } from './Spreadsheet/DataMap.js';
+import { fromFsWorkbook, toFsWorkbook } from './Spreadsheet/Datamap.js';
 import { map } from './CrossAsync.js';
 import { FsSpreadsheet_FsWorkbook__FsWorkbook_fromXlsxFile_Static_Z721C83C5, FsSpreadsheet_FsWorkbook__FsWorkbook_toXlsxFile_Static } from './fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/FsExtensions.fs.js';
 import { class_type } from '../node_modules/@fable-org/fable-library-js/Reflection.js';

package/dist/ts/ts/Yaml/ValidationPackage.d.ts

@@ -1,4 +1,4 @@
-import { YAMLElement_$union } from '../fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js';
+import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.4/YAMLiciousTypes.fs.js';
 import { Option } from '@fable-org/fable-library-js/Option.js';
 import { ValidationPackage } from '../ValidationPackages/ValidationPackage.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';

package/dist/ts/ts/Yaml/ValidationPackage.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ValidationPackage.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Yaml/ValidationPackage.ts"],"names":[],"mappings":"AACA,OAAO,EAAoE,kBAAkB,EAAE,MAAM,yDAAyD,CAAC;AAE/J,OAAO,EAAU,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAIvE,OAAO,EAAE,iBAAiB,EAAE,MAAM,4CAA4C,CAAC;AAI/E,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,wBAAgB,yBAAyB,CAAC,iBAAiB,EAAE,iBAAiB,GAAG,kBAAkB,CAWlG;AAED,eAAO,MAAM,yBAAyB,GAAI,SAAS,kBAAkB,KAAG,iBAG7D,CAAC;AAEZ,wBAAgB,8FAA8F,CAAC,CAAC,EAAE,MAAM,GAAG,iBAAiB,CAE3I;AAED,wBAAgB,2FAA2F,CAAC,UAAU,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,iBAAiB,KAAK,MAAM,CAAC,CAMrK;AAED,wBAAgB,oFAAoF,CAAC,KAAK,EAAE,iBAAiB,EAAE,UAAU,EAAE,MAAM,CAAC,KAAK,CAAC,GAAG,MAAM,CAEhK"}
+{"version":3,"file":"ValidationPackage.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Yaml/ValidationPackage.ts"],"names":[],"mappings":"AACA,OAAO,EAAoE,kBAAkB,EAAE,MAAM,iEAAiE,CAAC;AAEvK,OAAO,EAAU,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAIvE,OAAO,EAAE,iBAAiB,EAAE,MAAM,4CAA4C,CAAC;AAI/E,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,wBAAgB,yBAAyB,CAAC,iBAAiB,EAAE,iBAAiB,GAAG,kBAAkB,CAWlG;AAED,eAAO,MAAM,yBAAyB,GAAI,SAAS,kBAAkB,KAAG,iBAG7D,CAAC;AAEZ,wBAAgB,8FAA8F,CAAC,CAAC,EAAE,MAAM,GAAG,iBAAiB,CAE3I;AAED,wBAAgB,2FAA2F,CAAC,UAAU,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,iBAAiB,KAAK,MAAM,CAAC,CAMrK;AAED,wBAAgB,oFAAoF,CAAC,KAAK,EAAE,iBAAiB,EAAE,UAAU,EAAE,MAAM,CAAC,KAAK,CAAC,GAAG,MAAM,CAEhK"}

package/dist/ts/ts/Yaml/ValidationPackage.js

@@ -1,14 +1,14 @@
 import { choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
-import { YAMLElement_Nil, YAMLElement_Object, YAMLElement_Mapping, YAMLContent_create_27AED5E3, Config } from '../fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js';
+import { YAMLElement_Nil, YAMLElement_Object, YAMLElement_Mapping, YAMLContent_create_Z1C3A29C9, Config } from '../fable_modules/YAMLicious.1.0.0-alpha.4/YAMLiciousTypes.fs.js';
 import { equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
-import { string, tryInclude } from '../fable_modules/YAMLicious.0.0.3/Encode.fs.js';
+import { string, tryInclude } from '../fable_modules/YAMLicious.1.0.0-alpha.4/Encode.fs.js';
 import { toList, delay, collect, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { ValidationPackage } from '../ValidationPackages/ValidationPackage.js';
-import { object, string as string$1 } from '../fable_modules/YAMLicious.0.0.3/Decode.fs.js';
-import { read } from '../fable_modules/YAMLicious.0.0.3/Reader.fs.js';
+import { object, string as string$1 } from '../fable_modules/YAMLicious.1.0.0-alpha.4/Decode.fs.js';
+import { read } from '../fable_modules/YAMLicious.1.0.0-alpha.4/Reader.fs.js';
 import { defaultWhitespace } from './Encode.js';
-import { write } from '../fable_modules/YAMLicious.0.0.3/Writer.fs.js';
+import { write } from '../fable_modules/YAMLicious.1.0.0-alpha.4/Writer.fs.js';
 
 function ValidationPackage_encoder(validationpackage) {
   const objSeq = choose((tupledArg) => {
@@ -19,7 +19,7 @@ function ValidationPackage_encoder(validationpackage) {
       return [tupledArg[0], v];
     }
   }, ofArray([["name", string(validationpackage.Name)], tryInclude("version", string, validationpackage.Version)]));
-  return YAMLElement_Object(toList(delay(() => collect((matchValue) => singleton(YAMLElement_Mapping(YAMLContent_create_27AED5E3(matchValue[0]), matchValue[1])), objSeq))));
+  return YAMLElement_Object(toList(delay(() => collect((matchValue) => singleton(YAMLElement_Mapping(YAMLContent_create_Z1C3A29C9(matchValue[0]), matchValue[1])), objSeq))));
 }
 const ValidationPackage_decoder = (value_2) => object((get$) => {
   let objectArg, objectArg_1;

package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts

@@ -1,4 +1,4 @@
-import { YAMLElement_$union } from '../fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js';
+import { YAMLElement_$union } from '../fable_modules/YAMLicious.1.0.0-alpha.4/YAMLiciousTypes.fs.js';
 import { Option } from '@fable-org/fable-library-js/Option.js';
 import { ValidationPackagesConfig } from '../ValidationPackages/ValidationPackagesConfig.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';

package/dist/ts/ts/Yaml/ValidationPackagesConfig.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Yaml/ValidationPackagesConfig.ts"],"names":[],"mappings":"AACA,OAAO,EAAoE,kBAAkB,EAAE,MAAM,yDAAyD,CAAC;AAE/J,OAAO,EAAU,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAMvE,OAAO,EAAE,wBAAwB,EAAE,MAAM,mDAAmD,CAAC;AAI7F,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,wBAAgB,gCAAgC,CAAC,iBAAiB,EAAE,wBAAwB,GAAG,kBAAkB,CAWhH;AAED,eAAO,MAAM,gCAAgC,GAAI,SAAS,kBAAkB,KAAG,wBAGpE,CAAC;AAEZ,wBAAgB,4GAA4G,CAAC,CAAC,EAAE,MAAM,GAAG,wBAAwB,CAEhK;AAED,wBAAgB,yGAAyG,CAAC,UAAU,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,wBAAwB,KAAK,MAAM,CAAC,CAM1L;AAED,wBAAgB,kGAAkG,CAAC,KAAK,EAAE,wBAAwB,EAAE,UAAU,EAAE,MAAM,CAAC,KAAK,CAAC,GAAG,MAAM,CAErL"}
+{"version":3,"file":"ValidationPackagesConfig.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Yaml/ValidationPackagesConfig.ts"],"names":[],"mappings":"AACA,OAAO,EAAoE,kBAAkB,EAAE,MAAM,iEAAiE,CAAC;AAEvK,OAAO,EAAU,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAMvE,OAAO,EAAE,wBAAwB,EAAE,MAAM,mDAAmD,CAAC;AAI7F,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAG7D,wBAAgB,gCAAgC,CAAC,iBAAiB,EAAE,wBAAwB,GAAG,kBAAkB,CAWhH;AAED,eAAO,MAAM,gCAAgC,GAAI,SAAS,kBAAkB,KAAG,wBAGpE,CAAC;AAEZ,wBAAgB,4GAA4G,CAAC,CAAC,EAAE,MAAM,GAAG,wBAAwB,CAEhK;AAED,wBAAgB,yGAAyG,CAAC,UAAU,CAAC,EAAE,KAAK,GAAG,CAAC,CAAC,IAAI,EAAE,wBAAwB,KAAK,MAAM,CAAC,CAM1L;AAED,wBAAgB,kGAAkG,CAAC,KAAK,EAAE,wBAAwB,EAAE,UAAU,EAAE,MAAM,CAAC,KAAK,CAAC,GAAG,MAAM,CAErL"}