@nfdi4plants/arctrl 3.0.0-beta.9 → 3.0.1

package/dist/ts/ts/ROCrate/LDTypes/FormalParameter.js

@@ -0,0 +1,344 @@
+import { unwrap, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
+import { LDNode } from '../LDObject.js';
+import { clean } from '../Helper.js';
+import { createMissingIdentifier } from '../../Core/Helper/Identifier.js';
+import { class_type } from '../../../node_modules/@fable-org/fable-library-js/Reflection.js';
+
+class LDFormalParameter {
+  constructor() {
+  }
+  static get schemaType() {
+    return "https://bioschemas.org/FormalParameter";
+  }
+  static get encodingFormat() {
+    return "http://schema.org/encodingFormat";
+  }
+  static get name() {
+    return "http://schema.org/name";
+  }
+  static get sameAs() {
+    return "http://schema.org/sameAs";
+  }
+  static get description() {
+    return "http://schema.org/description";
+  }
+  static get workExample() {
+    return "http://schema.org/workExample";
+  }
+  static get defaultValue() {
+    return "http://schema.org/defaultValue";
+  }
+  static get valueRequired() {
+    return "http://schema.org/valueRequired";
+  }
+  static get identifier() {
+    return "http://schema.org/identifier";
+  }
+  static get image() {
+    return "http://schema.org/image";
+  }
+  static get mainEntityOfPage() {
+    return "http://schema.org/mainEntityOfPage";
+  }
+  static get potentialAction() {
+    return "http://schema.org/potentialAction";
+  }
+  static get subjectOf() {
+    return "http://schema.org/subjectOf";
+  }
+  static get url() {
+    return "http://schema.org/url";
+  }
+  static get alternateName() {
+    return "http://schema.org/alternateName";
+  }
+  static get disambiguatingDescription() {
+    return "http://schema.org/disambiguatingDescription";
+  }
+  static getEncodingFormats(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.encodingFormat, void 0, unwrap(graph), unwrap(context));
+  }
+  static setEncodingFormats(fp, encodingFormats, context) {
+    return fp.SetProperty(LDFormalParameter.encodingFormat, encodingFormats, unwrap(context));
+  }
+  static tryGetNameAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.name, unwrap(context));
+    let matchResult, n;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        n = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return n;
+      default:
+        return void 0;
+    }
+  }
+  static getNameAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.name, unwrap(context));
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        const n = value(matchValue);
+        return n;
+      } else {
+        throw new Error(`Property of \`name\` of object with @id \`${fp.Id}\` was not a string`);
+      }
+    } else {
+      throw new Error(`Could not access property \`name\` of object with @id \`${fp.Id}\``);
+    }
+  }
+  static setNameAsString(fp, name, context) {
+    return fp.SetProperty(LDFormalParameter.name, name, unwrap(context));
+  }
+  static getSameAs(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.sameAs, void 0, unwrap(graph), unwrap(context));
+  }
+  static setSameAs(fp, sames, context) {
+    return fp.SetProperty(LDFormalParameter.sameAs, sames, unwrap(context));
+  }
+  static tryGetDescriptionAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.description, unwrap(context));
+    let matchResult, d;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        d = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return d;
+      default:
+        return void 0;
+    }
+  }
+  static setDescriptionAsString(fp, description, context) {
+    return fp.SetProperty(LDFormalParameter.description, description, unwrap(context));
+  }
+  static tryGetWorkExampleAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.workExample, unwrap(context));
+    let matchResult, we;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        we = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return we;
+      default:
+        return void 0;
+    }
+  }
+  static setWorkExampleAsString(fp, workExample, context) {
+    return fp.SetProperty(LDFormalParameter.workExample, workExample, unwrap(context));
+  }
+  static tryGetDefaultValueAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.defaultValue, unwrap(context));
+    let matchResult, dv;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        dv = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return dv;
+      default:
+        return void 0;
+    }
+  }
+  static setDefaultValueAsString(fp, defaultValue, context) {
+    return fp.SetProperty(LDFormalParameter.defaultValue, defaultValue, unwrap(context));
+  }
+  static tryGetValueRequiredAsBoolean(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.valueRequired, unwrap(context));
+    let matchResult, vr;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "boolean") {
+        matchResult = 0;
+        vr = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return vr;
+      default:
+        return void 0;
+    }
+  }
+  static setValueRequiredAsBoolean(fp, valueRequired, context) {
+    return fp.SetProperty(LDFormalParameter.valueRequired, valueRequired, unwrap(context));
+  }
+  static getIdentifiers(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.identifier, void 0, unwrap(graph), unwrap(context));
+  }
+  static setIdentifiers(fp, identifiers, context) {
+    return fp.SetProperty(LDFormalParameter.identifier, identifiers, unwrap(context));
+  }
+  static tryGetImageAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.image, unwrap(context));
+    let matchResult, img;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        img = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return img;
+      default:
+        return void 0;
+    }
+  }
+  static setImageAsString(fp, image, context) {
+    return fp.SetProperty(LDFormalParameter.image, image, unwrap(context));
+  }
+  static tryGetMainEntityOfPageAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.mainEntityOfPage, unwrap(context));
+    let matchResult, meop;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        meop = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return meop;
+      default:
+        return void 0;
+    }
+  }
+  static setMainEntityOfPageAsString(fp, mainEntityOfPage, context) {
+    return fp.SetProperty(LDFormalParameter.mainEntityOfPage, mainEntityOfPage, unwrap(context));
+  }
+  static getPotentialActions(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.potentialAction, void 0, unwrap(graph), unwrap(context));
+  }
+  static setPotentialActions(fp, potentialActions, context) {
+    return fp.SetProperty(LDFormalParameter.potentialAction, potentialActions, unwrap(context));
+  }
+  static getSubjectOfs(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.subjectOf, void 0, unwrap(graph), unwrap(context));
+  }
+  static setSubjectOfs(fp, subjectOfs, context) {
+    return fp.SetProperty(LDFormalParameter.subjectOf, subjectOfs, unwrap(context));
+  }
+  static tryGetUrlAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.url, unwrap(context));
+    let matchResult, url;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        url = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return url;
+      default:
+        return void 0;
+    }
+  }
+  static setUrlAsString(fp, url, context) {
+    return fp.SetProperty(LDFormalParameter.url, url, unwrap(context));
+  }
+  static getAlternateNames(fp, graph, context) {
+    return fp.GetPropertyNodes(LDFormalParameter.alternateName, void 0, unwrap(graph), unwrap(context));
+  }
+  static setAlternateNames(fp, alternateNames, context) {
+    return fp.SetProperty(LDFormalParameter.alternateName, alternateNames, unwrap(context));
+  }
+  static tryGetDisambiguatingDescriptionAsString(fp, context) {
+    const matchValue = fp.TryGetPropertyAsSingleton(LDFormalParameter.disambiguatingDescription, unwrap(context));
+    let matchResult, desc;
+    if (matchValue != null) {
+      if (typeof value(matchValue) === "string") {
+        matchResult = 0;
+        desc = value(matchValue);
+      } else {
+        matchResult = 1;
+      }
+    } else {
+      matchResult = 1;
+    }
+    switch (matchResult) {
+      case 0:
+        return desc;
+      default:
+        return void 0;
+    }
+  }
+  static setDisambiguatingDescriptionAsString(fp, disambiguatingDescription, context) {
+    return fp.SetProperty(LDFormalParameter.disambiguatingDescription, disambiguatingDescription, unwrap(context));
+  }
+  static genID(name, workflowName, runName) {
+    let run_1, workflow_1, run, workflow;
+    return clean(workflowName == null ? runName != null ? (run_1 = value(runName), `#FormalParameter_R_${run_1}_${name}`) : `#FormalParameter_${name}_${createMissingIdentifier()}` : runName == null ? (workflow_1 = value(workflowName), `#FormalParameter_W_${workflow_1}_${name}`) : (run = value(runName), workflow = value(workflowName), `#FormalParameter_W_${workflow}_R_${run}_${name}`));
+  }
+  static validate(fp, context) {
+    return fp.HasType(LDFormalParameter.schemaType, unwrap(context)) && fp.AdditionalType.length > 0;
+  }
+  static create(additionalType, id, encodingFormats, name, sameAs, description, workExample, defaultValue, valueRequired, identifiers, image, subjectOfs, url, alternateNames, disambiguatingDescription, context) {
+    const fp = new LDNode(id == null ? clean(`#FormalParameter_${createMissingIdentifier()}`) : value(id), [LDFormalParameter.schemaType], void 0, unwrap(context));
+    fp.AdditionalType = [additionalType];
+    fp.SetOptionalProperty(LDFormalParameter.encodingFormat, encodingFormats, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.name, name, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.sameAs, sameAs, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.description, description, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.workExample, workExample, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.defaultValue, defaultValue, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.valueRequired, valueRequired, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.identifier, identifiers, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.image, image, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.subjectOf, subjectOfs, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.url, url, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.alternateName, alternateNames, unwrap(context));
+    fp.SetOptionalProperty(LDFormalParameter.disambiguatingDescription, disambiguatingDescription, unwrap(context));
+    return fp;
+  }
+}
+function LDFormalParameter_$reflection() {
+  return class_type("ARCtrl.ROCrate.LDFormalParameter", void 0, LDFormalParameter);
+}
+
+export { LDFormalParameter, LDFormalParameter_$reflection };

package/dist/ts/ts/ROCrate/{Generic → LDTypes}/LabProcess.d.ts

@@ -10,7 +10,9 @@ export declare class LDLabProcess {
     static get object_(): string;
     static get result(): string;
     static get executesLabProtocol(): string;
+    static get executesLabProtocolDeprecated(): string;
     static get parameterValue(): string;
+    static get parameterValueDeprecated(): string;
     static get endTime(): string;
     static get disambiguatingDescription(): string;
     static tryGetNameAsString(lp: LDNode, context?: LDContext): Option<string>;

package/dist/ts/ts/ROCrate/LDTypes/LabProcess.d.ts.map

@@ -0,0 +1 @@
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package/dist/ts/ts/ROCrate/{Generic → LDTypes}/LabProcess.js

@@ -28,9 +28,15 @@ class LDLabProcess {
     return "http://schema.org/result";
   }
   static get executesLabProtocol() {
+    return "https://bioschemas.org/properties/executesLabProtocol";
+  }
+  static get executesLabProtocolDeprecated() {
     return "https://bioschemas.org/executesLabProtocol";
   }
   static get parameterValue() {
+    return "https://bioschemas.org/properties/parameterValue";
+  }
+  static get parameterValueDeprecated() {
     return "https://bioschemas.org/parameterValue";
   }
   static get endTime() {
@@ -138,11 +144,11 @@ class LDLabProcess {
     return lp.SetProperty(LDLabProcess.result, results, unwrap(context));
   }
   static tryGetExecutesLabProtocol(lp, graph, context) {
-    let ldObject;
+    const filter = (ldObject, context_1) => LDLabProtocol.validate(ldObject, unwrap(context_1));
     const matchValue = lp.TryGetPropertyAsSingleNode(LDLabProcess.executesLabProtocol, unwrap(graph), unwrap(context));
     let matchResult, l_1;
     if (matchValue != null) {
-      if (ldObject = value(matchValue), LDLabProtocol.validate(ldObject, unwrap(context))) {
+      if (filter(value(matchValue), context)) {
         matchResult = 0;
         l_1 = value(matchValue);
       } else {
@@ -154,15 +160,35 @@ class LDLabProcess {
     switch (matchResult) {
       case 0:
         return l_1;
-      default:
-        return void 0;
+      default: {
+        const matchValue_1 = lp.TryGetPropertyAsSingleNode(LDLabProcess.executesLabProtocolDeprecated, unwrap(graph), unwrap(context));
+        let matchResult_1, l_3;
+        if (matchValue_1 != null) {
+          if (filter(value(matchValue_1), context)) {
+            matchResult_1 = 0;
+            l_3 = value(matchValue_1);
+          } else {
+            matchResult_1 = 1;
+          }
+        } else {
+          matchResult_1 = 1;
+        }
+        switch (matchResult_1) {
+          case 0:
+            return l_3;
+          default:
+            return void 0;
+        }
+      }
     }
   }
   static setExecutesLabProtocol(lp, executesLabProtocol, context) {
     return lp.SetProperty(LDLabProcess.executesLabProtocol, executesLabProtocol, unwrap(context));
   }
   static getParameterValues(lp, graph, context) {
-    return lp.GetPropertyNodes(LDLabProcess.parameterValue, (ldObject, context_1) => LDPropertyValue.validate(ldObject, unwrap(context_1)), unwrap(graph), unwrap(context));
+    const filter = (ldObject, context_1) => LDPropertyValue.validate(ldObject, unwrap(context_1));
+    const l = lp.GetPropertyNodes(LDLabProcess.parameterValue, filter, unwrap(graph), unwrap(context));
+    return l.length === 0 ? lp.GetPropertyNodes(LDLabProcess.parameterValueDeprecated, filter, unwrap(graph), unwrap(context)) : l;
   }
   static setParameterValues(lp, parameterValues, context) {
     return lp.SetProperty(LDLabProcess.parameterValue, parameterValues, unwrap(context));

package/dist/ts/ts/ROCrate/{Generic → LDTypes}/LabProtocol.d.ts

@@ -6,14 +6,18 @@ export declare class LDLabProtocol {
     constructor();
     static get schemaType(): string;
     static get description(): string;
-    static get intendedUse(): string;
     static get name(): string;
-    static get comment(): string;
     static get computationalTool(): string;
+    static get computationalToolDeprecated(): string;
     static get labEquipment(): string;
+    static get labEquipmentDeprecated(): string;
     static get reagent(): string;
+    static get reagentDeprecated(): string;
+    static get intendedUse(): string;
+    static get intendedUseDeprecated(): string;
     static get url(): string;
     static get version(): string;
+    static get comment(): string;
     static tryGetDescriptionAsString(lp: LDNode, context?: LDContext): Option<string>;
     static setDescriptionAsString<$j>(lp: LDNode, description: string, context?: LDContext): $j;
     static tryGetIntendedUseAsString(lp: LDNode, context?: LDContext): Option<string>;

package/dist/ts/ts/ROCrate/LDTypes/LabProtocol.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"LabProtocol.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/ROCrate/LDTypes/LabProtocol.ts"],"names":[],"mappings":"AAAA,OAAO,EAAS,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAE9E,OAAO,EAAE,OAAO,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AACjD,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAQ5C,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,aAAa;;IAGtB,MAAM,KAAK,UAAU,IAAI,MAAM,CAE9B;IACD,MAAM,KAAK,WAAW,IAAI,MAAM,CAE/B;IACD,MAAM,KAAK,IAAI,IAAI,MAAM,CAExB;IACD,MAAM,KAAK,iBAAiB,IAAI,MAAM,CAErC;IACD,MAAM,KAAK,2BAA2B,IAAI,MAAM,CAE/C;IACD,MAAM,KAAK,YAAY,IAAI,MAAM,CAEhC;IACD,MAAM,KAAK,sBAAsB,IAAI,MAAM,CAE1C;IACD,MAAM,KAAK,OAAO,IAAI,MAAM,CAE3B;IACD,MAAM,KAAK,iBAAiB,IAAI,MAAM,CAErC;IACD,MAAM,KAAK,WAAW,IAAI,MAAM,CAE/B;IACD,MAAM,KAAK,qBAAqB,IAAI,MAAM,CAEzC;IACD,MAAM,KAAK,GAAG,IAAI,MAAM,CAEvB;IACD,MAAM,KAAK,OAAO,IAAI,MAAM,CAE3B;IACD,MAAM,KAAK,OAAO,IAAI,MAAM,CAE3B;IACD,MAAM,CAAC,yBAAyB,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsBjF,MAAM,CAAC,sBAAsB,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAG3F,MAAM,CAAC,yBAAyB,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IA0CjF,MAAM,CAAC,sBAAsB,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAG3F,MAAM,CAAC,8BAA8B,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IA2CvG,MAAM,CAAC,2BAA2B,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGhG,MAAM,CAAC,kBAAkB,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsB1E,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;IAsB/D,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAG7E,MAAM,CAAC,WAAW,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,EAAE;IAG9E,MAAM,CAAC,WAAW,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAG/E,MAAM,CAAC,qBAAqB,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,EAAE;IAIxF,MAAM,CAAC,qBAAqB,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,kBAAkB,EAAE,MAAM,EAAE,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGnG,MAAM,CAAC,gBAAgB,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,EAAE;IAInF,MAAM,CAAC,gBAAgB,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,aAAa,EAAE,MAAM,EAAE,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGzF,MAAM,CAAC,WAAW,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,EAAE;IAI9E,MAAM,CAAC,WAAW,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,MAAM,EAAE,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAG/E,MAAM,CAAC,aAAa,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,EAAE;IAQhF,MAAM,CAAC,SAAS,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsBjE,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,GAAG,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGnE,MAAM,CAAC,qBAAqB,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsB7E,MAAM,CAAC,kBAAkB,CAAC,EAAE,EAAE,EAAE,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGnF,MAAM,CAAC,QAAQ,CAAC,EAAE,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,OAAO;IAGzD,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,EAAE,SAAS,CAAC,EAAE,MAAM,EAAE,SAAS,CAAC,EAAE,MAAM,GAAG,MAAM;IAIjG,MAAM,CAAC,MAAM,CAAC,EAAE,EAAE,MAAM,EAAE,IAAI,CAAC,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,MAAM,EAAE,EAAE,kBAAkB,CAAC,EAAE,MAAM,EAAE,EAAE,aAAa,CAAC,EAAE,MAAM,EAAE,EAAE,QAAQ,CAAC,EAAE,MAAM,EAAE,EAAE,GAAG,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;CAavP;AAED,wBAAgB,yBAAyB,IAAI,QAAQ,CAEpD"}

package/dist/ts/ts/ROCrate/{Generic → LDTypes}/LabProtocol.js

@@ -18,30 +18,42 @@ class LDLabProtocol {
   static get description() {
     return "http://schema.org/description";
   }
-  static get intendedUse() {
-    return "https://bioschemas.org/intendedUse";
-  }
   static get name() {
     return "http://schema.org/name";
   }
-  static get comment() {
-    return "http://schema.org/comment";
-  }
   static get computationalTool() {
+    return "https://bioschemas.org/properties/computationalTool";
+  }
+  static get computationalToolDeprecated() {
     return "https://bioschemas.org/computationalTool";
   }
   static get labEquipment() {
+    return "https://bioschemas.org/properties/labEquipment";
+  }
+  static get labEquipmentDeprecated() {
     return "https://bioschemas.org/labEquipment";
   }
   static get reagent() {
+    return "https://bioschemas.org/properties/reagent";
+  }
+  static get reagentDeprecated() {
     return "https://bioschemas.org/reagent";
   }
+  static get intendedUse() {
+    return "https://bioschemas.org/properties/intendedUse";
+  }
+  static get intendedUseDeprecated() {
+    return "https://bioschemas.org/intendedUse";
+  }
   static get url() {
     return "http://schema.org/url";
   }
   static get version() {
     return "http://schema.org/version";
   }
+  static get comment() {
+    return "http://schema.org/comment";
+  }
   static tryGetDescriptionAsString(lp, context) {
     const matchValue = lp.TryGetPropertyAsSingleton(LDLabProtocol.description, unwrap(context));
     let matchResult, d;
@@ -81,19 +93,37 @@ class LDLabProtocol {
     switch (matchResult) {
       case 0:
         return iu;
-      default:
-        return void 0;
+      default: {
+        const matchValue_1 = lp.TryGetPropertyAsSingleton(LDLabProtocol.intendedUseDeprecated, unwrap(context));
+        let matchResult_1, iu_1;
+        if (matchValue_1 != null) {
+          if (typeof value(matchValue_1) === "string") {
+            matchResult_1 = 0;
+            iu_1 = value(matchValue_1);
+          } else {
+            matchResult_1 = 1;
+          }
+        } else {
+          matchResult_1 = 1;
+        }
+        switch (matchResult_1) {
+          case 0:
+            return iu_1;
+          default:
+            return void 0;
+        }
+      }
     }
   }
   static setIntendedUseAsString(lp, intendedUse, context) {
     return lp.SetProperty(LDLabProtocol.intendedUse, intendedUse, unwrap(context));
   }
   static tryGetIntendedUseAsDefinedTerm(lp, graph, context) {
-    let ldObject;
+    const filter = (ldObject, context_1) => LDDefinedTerm.validate(ldObject, unwrap(context_1));
     const matchValue = lp.TryGetPropertyAsSingleNode(LDLabProtocol.intendedUse, unwrap(graph), unwrap(context));
     let matchResult, iu_1;
     if (matchValue != null) {
-      if (ldObject = value(matchValue), LDDefinedTerm.validate(ldObject, unwrap(context))) {
+      if (filter(value(matchValue), context)) {
         matchResult = 0;
         iu_1 = value(matchValue);
       } else {
@@ -105,8 +135,26 @@ class LDLabProtocol {
     switch (matchResult) {
       case 0:
         return iu_1;
-      default:
-        return void 0;
+      default: {
+        const matchValue_1 = lp.TryGetPropertyAsSingleNode(LDLabProtocol.intendedUseDeprecated, unwrap(graph), unwrap(context));
+        let matchResult_1, iu_3;
+        if (matchValue_1 != null) {
+          if (filter(value(matchValue_1), context)) {
+            matchResult_1 = 0;
+            iu_3 = value(matchValue_1);
+          } else {
+            matchResult_1 = 1;
+          }
+        } else {
+          matchResult_1 = 1;
+        }
+        switch (matchResult_1) {
+          case 0:
+            return iu_3;
+          default:
+            return void 0;
+        }
+      }
     }
   }
   static setIntendedUseAsDefinedTerm(lp, intendedUse, context) {
@@ -162,19 +210,22 @@ class LDLabProtocol {
     return lp.SetProperty(LDLabProtocol.comment, comments, unwrap(context));
   }
   static getComputationalTools(lp, graph, context) {
-    return lp.GetPropertyNodes(LDLabProtocol.computationalTool, void 0, unwrap(graph), unwrap(context));
+    const l = lp.GetPropertyNodes(LDLabProtocol.computationalTool, void 0, unwrap(graph), unwrap(context));
+    return l.length === 0 ? lp.GetPropertyNodes(LDLabProtocol.computationalToolDeprecated, void 0, unwrap(graph), unwrap(context)) : l;
   }
   static setComputationalTools(lp, computationalTools, context) {
     return lp.SetProperty(LDLabProtocol.computationalTool, computationalTools, unwrap(context));
   }
   static getLabEquipments(lp, graph, context) {
-    return lp.GetPropertyNodes(LDLabProtocol.labEquipment, void 0, unwrap(graph), unwrap(context));
+    const l = lp.GetPropertyNodes(LDLabProtocol.labEquipment, void 0, unwrap(graph), unwrap(context));
+    return l.length === 0 ? lp.GetPropertyNodes(LDLabProtocol.labEquipmentDeprecated, void 0, unwrap(graph), unwrap(context)) : l;
   }
   static setLabEquipments(lp, labEquipments, context) {
     return lp.SetProperty(LDLabProtocol.labEquipment, labEquipments, unwrap(context));
   }
   static getReagents(lp, graph, context) {
-    return lp.GetPropertyNodes(LDLabProtocol.reagent, void 0, unwrap(graph), unwrap(context));
+    const l = lp.GetPropertyNodes(LDLabProtocol.reagent, void 0, unwrap(graph), unwrap(context));
+    return l.length === 0 ? lp.GetPropertyNodes(LDLabProtocol.reagentDeprecated, void 0, unwrap(graph), unwrap(context)) : l;
   }
   static setReagents(lp, reagents, context) {
     return lp.SetProperty(LDLabProtocol.reagent, reagents, unwrap(context));

package/dist/ts/ts/ROCrate/{Generic → LDTypes}/Organization.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Organization.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/ROCrate/Generic/Organization.ts"],"names":[],"mappings":"AAAA,OAAO,EAAS,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAE9E,OAAO,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AACxC,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAE5C,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,cAAc;;IAGvB,MAAM,KAAK,UAAU,IAAI,MAAM,CAE9B;IACD,MAAM,KAAK,IAAI,IAAI,MAAM,CAExB;IACD,MAAM,CAAC,kBAAkB,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsBzE,MAAM,CAAC,eAAe,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;IAe9D,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGzE,MAAM,CAAC,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM;IAGlC,MAAM,CAAC,QAAQ,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,OAAO;IAGxD,MAAM,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;CAKxE;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}
+{"version":3,"file":"Organization.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/ROCrate/LDTypes/Organization.ts"],"names":[],"mappings":"AAAA,OAAO,EAAS,MAAM,EAAU,MAAM,uCAAuC,CAAC;AAE9E,OAAO,EAAE,MAAM,EAAE,MAAM,gBAAgB,CAAC;AACxC,OAAO,EAAE,SAAS,EAAE,MAAM,iBAAiB,CAAC;AAE5C,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,qBAAa,cAAc;;IAGvB,MAAM,KAAK,UAAU,IAAI,MAAM,CAE9B;IACD,MAAM,KAAK,IAAI,IAAI,MAAM,CAExB;IACD,MAAM,CAAC,kBAAkB,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM,CAAC,MAAM,CAAC;IAsBzE,MAAM,CAAC,eAAe,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;IAe9D,MAAM,CAAC,eAAe,CAAC,EAAE,EAAE,CAAC,EAAE,MAAM,EAAE,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,EAAE;IAGzE,MAAM,CAAC,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM;IAGlC,MAAM,CAAC,QAAQ,CAAC,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,OAAO;IAGxD,MAAM,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,EAAE,EAAE,CAAC,EAAE,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,GAAG,MAAM;CAKxE;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}

package/dist/ts/ts/ROCrate/{Generic → LDTypes}/Person.d.ts.map

@@ -1 +1 @@
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package/dist/ts/ts/ROCrate/{Generic → LDTypes}/PostalAddress.d.ts.map

@@ -1 +1 @@
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