@nfdi4plants/arctrl 3.0.0-beta.3 → 3.0.0-beta.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +2 -0
- package/dist/ts/index.js +63 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Array.js +354 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Async.js +28 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/AsyncBuilder.js +186 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/BigInt.js +8 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Boolean.js +24 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Char.js +73 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/CollectionUtil.js +31 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Date.js +574 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/DateOffset.js +59 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Decimal.js +65 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Double.js +30 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/FSharp.Core.js +5 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Global.js +5 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Guid.js +48 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Int32.js +120 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/List.js +680 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Long.js +40 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Map.js +655 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/MapUtil.js +105 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/MutableMap.js +320 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/MutableSet.js +204 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Native.js +10 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Numeric.js +73 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Option.js +65 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Range.js +23 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Reflection.js +111 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/RegExp.js +114 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Result.js +36 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Seq.js +846 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Seq2.js +65 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Set.js +1160 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/String.js +364 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/System.Text.js +40 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Types.js +193 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Unicode.13.0.0.js +6 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Uri.js +160 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/Util.js +367 -0
- package/dist/ts/node_modules/@fable-org/fable-library-js/lib/big.js +825 -0
- package/dist/ts/ts/ARC.js +914 -0
- package/dist/ts/ts/Contract/ARC.js +52 -0
- package/dist/ts/ts/Contract/ArcAssay.js +80 -0
- package/dist/ts/ts/Contract/ArcInvestigation.js +57 -0
- package/dist/ts/ts/Contract/ArcRun.js +76 -0
- package/dist/ts/ts/Contract/ArcStudy.js +76 -0
- package/dist/ts/ts/Contract/ArcWorkflow.js +77 -0
- package/dist/ts/ts/Contract/Contract.js +45 -0
- package/dist/ts/ts/Contract/Datamap.js +221 -0
- package/dist/ts/ts/Contract/Git.js +57 -0
- package/dist/ts/ts/Contract/ValidationPackagesConfig.js +57 -0
- package/dist/ts/ts/ContractIO/ContractIO.js +202 -0
- package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts +1 -1
- package/dist/ts/ts/ContractIO/FileSystemHelper.d.ts.map +1 -1
- package/dist/ts/ts/ContractIO/FileSystemHelper.js +273 -0
- package/dist/ts/ts/Conversion.js +1247 -0
- package/dist/ts/ts/Core/ArcTypes.js +3393 -0
- package/dist/ts/ts/Core/Comment.js +91 -0
- package/dist/ts/ts/Core/CommentList.js +27 -0
- package/dist/ts/ts/Core/Conversion.js +923 -0
- package/dist/ts/ts/Core/Data.js +179 -0
- package/dist/ts/ts/Core/DataContext.js +108 -0
- package/dist/ts/ts/Core/DataFile.js +50 -0
- package/dist/ts/ts/Core/DataMap.js +53 -0
- package/dist/ts/ts/Core/Helper/Collections.js +323 -0
- package/dist/ts/ts/Core/Helper/HashCodes.js +35 -0
- package/dist/ts/ts/Core/Helper/Identifier.js +96 -0
- package/dist/ts/ts/Core/Helper/ORCID.js +34 -0
- package/dist/ts/ts/Core/Helper/Regex.js +296 -0
- package/dist/ts/ts/Core/Helper/SemVer.js +31 -0
- package/dist/ts/ts/Core/Helper/Url.js +32 -0
- package/dist/ts/ts/Core/IdentifierSetters.js +9 -0
- package/dist/ts/ts/Core/OntologyAnnotation.js +207 -0
- package/dist/ts/ts/Core/OntologySourceReference.js +84 -0
- package/dist/ts/ts/Core/Person.js +183 -0
- package/dist/ts/ts/Core/Process/ColumnIndex.js +73 -0
- package/dist/ts/ts/Core/Process/Component.js +121 -0
- package/dist/ts/ts/Core/Process/Factor.js +104 -0
- package/dist/ts/ts/Core/Process/FactorValue.js +68 -0
- package/dist/ts/ts/Core/Process/Material.js +49 -0
- package/dist/ts/ts/Core/Process/MaterialAttribute.js +30 -0
- package/dist/ts/ts/Core/Process/MaterialAttributeValue.js +68 -0
- package/dist/ts/ts/Core/Process/MaterialType.js +28 -0
- package/dist/ts/ts/Core/Process/Process.js +136 -0
- package/dist/ts/ts/Core/Process/ProcessInput.js +207 -0
- package/dist/ts/ts/Core/Process/ProcessOutput.js +178 -0
- package/dist/ts/ts/Core/Process/ProcessParameterValue.js +135 -0
- package/dist/ts/ts/Core/Process/ProcessSequence.js +56 -0
- package/dist/ts/ts/Core/Process/Protocol.js +54 -0
- package/dist/ts/ts/Core/Process/ProtocolParameter.js +69 -0
- package/dist/ts/ts/Core/Process/Sample.js +44 -0
- package/dist/ts/ts/Core/Process/Source.js +38 -0
- package/dist/ts/ts/Core/Publication.js +108 -0
- package/dist/ts/ts/Core/Table/ArcTable.js +889 -0
- package/dist/ts/ts/Core/Table/ArcTableAux.js +993 -0
- package/dist/ts/ts/Core/Table/ArcTables.js +415 -0
- package/dist/ts/ts/Core/Table/CompositeCell.js +334 -0
- package/dist/ts/ts/Core/Table/CompositeColumn.js +52 -0
- package/dist/ts/ts/Core/Table/CompositeHeader.js +792 -0
- package/dist/ts/ts/Core/Template.js +180 -0
- package/dist/ts/ts/Core/Templates.js +75 -0
- package/dist/ts/ts/Core/URI.js +8 -0
- package/dist/ts/ts/Core/Value.js +194 -0
- package/dist/ts/ts/CrossAsync.js +20 -0
- package/dist/ts/ts/FileSystem/DefaultGitattributes.js +3 -0
- package/dist/ts/ts/FileSystem/DefaultGitignore.js +3 -0
- package/dist/ts/ts/FileSystem/FileSystem.js +48 -0
- package/dist/ts/ts/FileSystem/FileSystemTree.js +339 -0
- package/dist/ts/ts/FileSystem/Path.js +36 -0
- package/dist/ts/ts/Json/Assay.d.ts +1 -1
- package/dist/ts/ts/Json/Assay.js +221 -0
- package/dist/ts/ts/Json/Comment.d.ts +1 -1
- package/dist/ts/ts/Json/Comment.js +112 -0
- package/dist/ts/ts/Json/Data.d.ts +1 -1
- package/dist/ts/ts/Json/Data.js +138 -0
- package/dist/ts/ts/Json/DataFile.d.ts +1 -1
- package/dist/ts/ts/Json/DataFile.js +55 -0
- package/dist/ts/ts/Json/DataMap/DataContext.d.ts +1 -1
- package/dist/ts/ts/Json/DataMap/DataContext.js +39 -0
- package/dist/ts/ts/Json/DataMap/DataMap.d.ts +1 -1
- package/dist/ts/ts/Json/DataMap/DataMap.js +27 -0
- package/dist/ts/ts/Json/Decode.d.ts +2 -2
- package/dist/ts/ts/Json/Decode.js +209 -0
- package/dist/ts/ts/Json/Encode.d.ts +1 -1
- package/dist/ts/ts/Json/Encode.js +65 -0
- package/dist/ts/ts/Json/IDTable.d.ts +1 -1
- package/dist/ts/ts/Json/IDTable.js +28 -0
- package/dist/ts/ts/Json/Investigation.d.ts +1 -1
- package/dist/ts/ts/Json/Investigation.js +229 -0
- package/dist/ts/ts/Json/OntologyAnnotation.d.ts +1 -1
- package/dist/ts/ts/Json/OntologyAnnotation.js +194 -0
- package/dist/ts/ts/Json/OntologySourceReference.d.ts +1 -1
- package/dist/ts/ts/Json/OntologySourceReference.js +119 -0
- package/dist/ts/ts/Json/Person.d.ts +1 -1
- package/dist/ts/ts/Json/Person.js +316 -0
- package/dist/ts/ts/Json/Process/AssayMaterials.d.ts +1 -1
- package/dist/ts/ts/Json/Process/AssayMaterials.js +21 -0
- package/dist/ts/ts/Json/Process/Component.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Component.js +41 -0
- package/dist/ts/ts/Json/Process/Factor.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Factor.js +53 -0
- package/dist/ts/ts/Json/Process/FactorValue.d.ts +1 -1
- package/dist/ts/ts/Json/Process/FactorValue.js +44 -0
- package/dist/ts/ts/Json/Process/Material.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Material.js +112 -0
- package/dist/ts/ts/Json/Process/MaterialAttribute.d.ts +1 -1
- package/dist/ts/ts/Json/Process/MaterialAttribute.js +43 -0
- package/dist/ts/ts/Json/Process/MaterialAttributeValue.d.ts +1 -1
- package/dist/ts/ts/Json/Process/MaterialAttributeValue.js +44 -0
- package/dist/ts/ts/Json/Process/MaterialType.d.ts +1 -1
- package/dist/ts/ts/Json/Process/MaterialType.js +45 -0
- package/dist/ts/ts/Json/Process/Process.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Process.js +103 -0
- package/dist/ts/ts/Json/Process/ProcessInput.d.ts +1 -1
- package/dist/ts/ts/Json/Process/ProcessInput.js +42 -0
- package/dist/ts/ts/Json/Process/ProcessOutput.d.ts +1 -1
- package/dist/ts/ts/Json/Process/ProcessOutput.js +35 -0
- package/dist/ts/ts/Json/Process/ProcessParameterValue.d.ts +1 -1
- package/dist/ts/ts/Json/Process/ProcessParameterValue.js +28 -0
- package/dist/ts/ts/Json/Process/Protocol.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Protocol.js +166 -0
- package/dist/ts/ts/Json/Process/ProtocolParameter.d.ts +1 -1
- package/dist/ts/ts/Json/Process/ProtocolParameter.js +43 -0
- package/dist/ts/ts/Json/Process/Sample.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Sample.js +165 -0
- package/dist/ts/ts/Json/Process/Source.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Source.js +133 -0
- package/dist/ts/ts/Json/Process/StudyMaterials.d.ts +1 -1
- package/dist/ts/ts/Json/Process/StudyMaterials.js +23 -0
- package/dist/ts/ts/Json/Process/Value.d.ts +1 -1
- package/dist/ts/ts/Json/Process/Value.js +41 -0
- package/dist/ts/ts/Json/PropertyValue.d.ts +1 -1
- package/dist/ts/ts/Json/PropertyValue.js +280 -0
- package/dist/ts/ts/Json/Publication.d.ts +1 -1
- package/dist/ts/ts/Json/Publication.js +123 -0
- package/dist/ts/ts/Json/ROCrate/LDContext.d.ts +1 -1
- package/dist/ts/ts/Json/ROCrate/LDContext.js +115 -0
- package/dist/ts/ts/Json/ROCrate/LDGraph.d.ts +1 -1
- package/dist/ts/ts/Json/ROCrate/LDGraph.js +83 -0
- package/dist/ts/ts/Json/ROCrate/LDNode.d.ts +1 -1
- package/dist/ts/ts/Json/ROCrate/LDNode.js +190 -0
- package/dist/ts/ts/Json/ROCrate/LDRef.d.ts +1 -1
- package/dist/ts/ts/Json/ROCrate/LDRef.js +24 -0
- package/dist/ts/ts/Json/ROCrate/LDValue.d.ts +1 -1
- package/dist/ts/ts/Json/ROCrate/LDValue.js +63 -0
- package/dist/ts/ts/Json/StringTable.d.ts +1 -1
- package/dist/ts/ts/Json/StringTable.js +66 -0
- package/dist/ts/ts/Json/Study.d.ts +1 -1
- package/dist/ts/ts/Json/Study.js +326 -0
- package/dist/ts/ts/Json/Table/ArcTable.d.ts +1 -1
- package/dist/ts/ts/Json/Table/ArcTable.js +210 -0
- package/dist/ts/ts/Json/Table/CellTable.d.ts +1 -1
- package/dist/ts/ts/Json/Table/CellTable.js +53 -0
- package/dist/ts/ts/Json/Table/CompositeCell.d.ts +1 -1
- package/dist/ts/ts/Json/Table/CompositeCell.js +106 -0
- package/dist/ts/ts/Json/Table/CompositeHeader.d.ts +1 -1
- package/dist/ts/ts/Json/Table/CompositeHeader.js +121 -0
- package/dist/ts/ts/Json/Table/IOType.d.ts +1 -1
- package/dist/ts/ts/Json/Table/IOType.js +15 -0
- package/dist/ts/ts/Json/Table/OATable.d.ts +1 -1
- package/dist/ts/ts/Json/Table/OATable.js +50 -0
- package/dist/ts/ts/Json/Table/Templates.d.ts +1 -1
- package/dist/ts/ts/Json/Table/Templates.js +15 -0
- package/dist/ts/ts/Json/context/rocrate/isa_assay_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_assay_context.js +61 -0
- package/dist/ts/ts/Json/context/rocrate/isa_comment_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_comment_context.js +29 -0
- package/dist/ts/ts/Json/context/rocrate/isa_data_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_data_context.js +41 -0
- package/dist/ts/ts/Json/context/rocrate/isa_investigation_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_investigation_context.js +69 -0
- package/dist/ts/ts/Json/context/rocrate/isa_material_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_material_context.js +37 -0
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_annotation_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_annotation_context.js +37 -0
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_source_reference_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_ontology_source_reference_context.js +41 -0
- package/dist/ts/ts/Json/context/rocrate/isa_organization_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_organization_context.js +25 -0
- package/dist/ts/ts/Json/context/rocrate/isa_person_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_person_context.js +86 -0
- package/dist/ts/ts/Json/context/rocrate/isa_process_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_process_context.js +57 -0
- package/dist/ts/ts/Json/context/rocrate/isa_protocol_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_protocol_context.js +61 -0
- package/dist/ts/ts/Json/context/rocrate/isa_publication_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_publication_context.js +45 -0
- package/dist/ts/ts/Json/context/rocrate/isa_sample_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_sample_context.js +33 -0
- package/dist/ts/ts/Json/context/rocrate/isa_source_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_source_context.js +33 -0
- package/dist/ts/ts/Json/context/rocrate/isa_study_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/isa_study_context.js +77 -0
- package/dist/ts/ts/Json/context/rocrate/property_value_context.d.ts +1 -1
- package/dist/ts/ts/Json/context/rocrate/property_value_context.js +61 -0
- package/dist/ts/ts/Json/context/rocrate/rocrate_context.d.ts +1 -1
- package/dist/ts/ts/Json.js +171 -0
- package/dist/ts/ts/JsonIO/Assay.js +77 -0
- package/dist/ts/ts/JsonIO/Investigation.js +77 -0
- package/dist/ts/ts/JsonIO/LDObject.js +77 -0
- package/dist/ts/ts/JsonIO/OntologyAnnotation.js +56 -0
- package/dist/ts/ts/JsonIO/Study.js +77 -0
- package/dist/ts/ts/JsonIO/Table/Compression.d.ts +1 -1
- package/dist/ts/ts/JsonIO/Table/Compression.js +39 -0
- package/dist/ts/ts/JsonIO/Table/Templates.d.ts +1 -1
- package/dist/ts/ts/JsonIO/Table/Templates.js +25 -0
- package/dist/ts/ts/ROCrate/Generic/Comment.js +103 -0
- package/dist/ts/ts/ROCrate/Generic/Dataset.js +624 -0
- package/dist/ts/ts/ROCrate/Generic/DefinedTerm.js +103 -0
- package/dist/ts/ts/ROCrate/Generic/File.js +184 -0
- package/dist/ts/ts/ROCrate/Generic/LabProcess.js +222 -0
- package/dist/ts/ts/ROCrate/Generic/LabProtocol.js +257 -0
- package/dist/ts/ts/ROCrate/Generic/Organization.js +63 -0
- package/dist/ts/ts/ROCrate/Generic/Person.js +377 -0
- package/dist/ts/ts/ROCrate/Generic/PostalAddress.js +143 -0
- package/dist/ts/ts/ROCrate/Generic/PropertyValue.js +512 -0
- package/dist/ts/ts/ROCrate/Generic/Sample.js +131 -0
- package/dist/ts/ts/ROCrate/Generic/ScholarlyArticle.js +173 -0
- package/dist/ts/ts/ROCrate/Helper.js +7 -0
- package/dist/ts/ts/ROCrate/LDContext.js +288 -0
- package/dist/ts/ts/ROCrate/LDObject.js +855 -0
- package/dist/ts/ts/ROCrate/ROCrateContext.js +39 -0
- package/dist/ts/ts/ROCrateIO.d.ts +1 -1
- package/dist/ts/ts/ROCrateIO.js +58 -0
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/AnnotationTable/ArcTable.js +149 -0
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeCell.js +63 -0
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeColumn.js +108 -0
- package/dist/ts/ts/Spreadsheet/AnnotationTable/CompositeHeader.js +410 -0
- package/dist/ts/ts/Spreadsheet/ArcAssay.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/ArcAssay.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcAssay.js +169 -0
- package/dist/ts/ts/Spreadsheet/ArcInvestigation.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/ArcInvestigation.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcInvestigation.js +316 -0
- package/dist/ts/ts/Spreadsheet/ArcRun.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/ArcRun.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcRun.js +136 -0
- package/dist/ts/ts/Spreadsheet/ArcStudy.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/ArcStudy.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcStudy.js +92 -0
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/ArcWorkflow.js +125 -0
- package/dist/ts/ts/Spreadsheet/CollectionAux.js +34 -0
- package/dist/ts/ts/Spreadsheet/DataMap.d.ts +1 -1
- package/dist/ts/ts/Spreadsheet/DataMap.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DataMap.js +33 -0
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts +2 -2
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapColumn.js +41 -0
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts +1 -1
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapHeader.js +418 -0
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts +3 -3
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/DataMapTable/DataMapTable.js +85 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Assays.js +90 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Comment.js +58 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Contacts.js +85 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Conversions.js +133 -0
- package/dist/ts/ts/Spreadsheet/Metadata/DesignDescriptors.js +15 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Factors.js +74 -0
- package/dist/ts/ts/Spreadsheet/Metadata/OntologyAnnotation.js +58 -0
- package/dist/ts/ts/Spreadsheet/Metadata/OntologySourceReference.js +62 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Protocols.js +94 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Publication.js +81 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Run.js +91 -0
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.d.ts +3 -3
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.d.ts.map +1 -1
- package/dist/ts/ts/Spreadsheet/Metadata/SparseTable.js +193 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Study.js +238 -0
- package/dist/ts/ts/Spreadsheet/Metadata/Workflow.js +105 -0
- package/dist/ts/ts/Template.Web.js +22 -0
- package/dist/ts/ts/ValidationPackages/ValidationPackage.js +53 -0
- package/dist/ts/ts/ValidationPackages/ValidationPackagesConfig.js +78 -0
- package/dist/ts/ts/WebRequest/WebRequest.Node.js +13 -0
- package/dist/ts/ts/WebRequest/WebRequest.js +19 -0
- package/dist/ts/ts/Xlsx.d.ts +1 -1
- package/dist/ts/ts/Xlsx.d.ts.map +1 -1
- package/dist/ts/ts/Xlsx.js +91 -0
- package/dist/ts/ts/Yaml/Encode.js +8 -0
- package/dist/ts/ts/Yaml/ValidationPackage.js +26 -0
- package/dist/ts/ts/Yaml/ValidationPackagesConfig.js +40 -0
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/DynamicObj.fs.js +344 -0
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/FableJS.fs.js +103 -0
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/HashCodes.fs.js +19 -0
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/PropertyHelper.fs.js +17 -0
- package/dist/ts/ts/fable_modules/DynamicObj.7.0.1/ReflectionUtils.fs.js +7 -0
- package/dist/ts/ts/fable_modules/Fable.Exceljs.1.6.0/ExcelJs.fs.js +5 -0
- package/dist/ts/ts/fable_modules/Fable.Fetch.2.6.0/Fetch.fs.js +18 -0
- package/dist/ts/ts/fable_modules/Fable.Promise.3.2.0/Promise.fs.js +44 -0
- package/dist/ts/ts/fable_modules/Fable.Promise.3.2.0/PromiseImpl.fs.js +5 -0
- package/dist/ts/ts/fable_modules/Fable.SimpleHttp.3.5.0/Http.fs.js +142 -0
- package/dist/ts/ts/fable_modules/Fable.SimpleHttp.3.5.0/Types.fs.js +76 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCell.fs.js +359 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCellsCollection.fs.js +344 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsAddress.fs.js +154 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsColumn.fs.js +116 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsRow.fs.js +126 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorkbook.fs.js +135 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/FsWorksheet.fs.js +422 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/HashCodes.fs.js +5 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Json/Value.fs.js +25 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRange.fs.js +28 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeAddress.fs.js +82 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeBase.fs.js +69 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeColumn.fs.js +42 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Ranges/FsRangeRow.fs.js +29 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Tables/FsTable.fs.js +348 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.7.0.0-alpha.1/Tables/FsTableField.fs.js +86 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Cell.fs.js +68 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/FsExtensions.fs.js +12 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Table.fs.js +54 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Workbook.fs.js +33 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Worksheet.fs.js +63 -0
- package/dist/ts/ts/fable_modules/FsSpreadsheet.Js.7.0.0-alpha.1/Xlsx.fs.js +66 -0
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js +544 -0
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js +31 -0
- package/dist/ts/ts/fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js +38 -0
- package/dist/ts/ts/fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js +79 -0
- package/dist/ts/ts/fable_modules/Thoth.Json.JavaScript.0.4.1/Encode.fs.js +57 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Decode.fs.js +235 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Encode.fs.js +16 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Persil.fs.js +45 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Preprocessing.fs.js +89 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Reader.fs.js +480 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Regex.fs.js +11 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/RegexActivePatterns.fs.js +212 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/Writer.fs.js +164 -0
- package/dist/ts/ts/fable_modules/YAMLicious.0.0.3/YAMLiciousTypes.fs.js +136 -0
- package/package.json +10 -7
- package/dist/ts/__vite-browser-external-2447137e.js +0 -4
- package/dist/ts/__vite-browser-external-b3701507.cjs +0 -1
- package/dist/ts/arctrl.cjs.js +0 -5691
- package/dist/ts/arctrl.es.js +0 -35562
- package/dist/ts/arctrl.umd.js +0 -5691
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import { defaultArg, unwrap, map as map$1 } from '../../node_modules/@fable-org/fable-library-js/Option.js';
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import { tryFind } from '../../node_modules/@fable-org/fable-library-js/Array.js';
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import { equals } from '../../node_modules/@fable-org/fable-library-js/Util.js';
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import { append, singleton, map, choose, ofArray } from '../../node_modules/@fable-org/fable-library-js/List.js';
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import { ResizeArray_map } from './Helper/Collections.js';
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import { boxHashArray, boxHashOption, boxHashSeq, hash } from './Helper/HashCodes.js';
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import { StringBuilder_$ctor, StringBuilder__Append_Z721C83C5 } from '../../node_modules/@fable-org/fable-library-js/System.Text.js';
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import { join, toText, printf } from '../../node_modules/@fable-org/fable-library-js/String.js';
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import { length } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
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import { toString } from '../../node_modules/@fable-org/fable-library-js/Types.js';
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class Person {
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constructor(orcid, lastName, firstName, midInitials, email, phone, fax, address, affiliation, roles, comments) {
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this._orcid = orcid;
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this._lastName = lastName;
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this._firstName = firstName;
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this._midInitials = midInitials;
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this._email = email;
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this._phone = phone;
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this._fax = fax;
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this._address = address;
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this._affiliation = affiliation;
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this._roles = defaultArg(roles, []);
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this._comments = defaultArg(comments, []);
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}
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get ORCID() {
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const this$ = this;
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return unwrap(this$._orcid);
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}
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set ORCID(orcid) {
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const this$ = this;
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this$._orcid = orcid;
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}
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get FirstName() {
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const this$ = this;
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return unwrap(this$._firstName);
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}
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set FirstName(firstName) {
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const this$ = this;
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this$._firstName = firstName;
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}
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get LastName() {
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const this$ = this;
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return unwrap(this$._lastName);
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}
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set LastName(lastName) {
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const this$ = this;
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this$._lastName = lastName;
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}
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get MidInitials() {
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const this$ = this;
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return unwrap(this$._midInitials);
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}
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set MidInitials(midInitials) {
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const this$ = this;
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this$._midInitials = midInitials;
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}
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get Address() {
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const this$ = this;
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return unwrap(this$._address);
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}
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set Address(address) {
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const this$ = this;
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this$._address = address;
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}
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get Affiliation() {
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const this$ = this;
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return unwrap(this$._affiliation);
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}
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set Affiliation(affiliation) {
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const this$ = this;
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this$._affiliation = affiliation;
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}
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get EMail() {
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const this$ = this;
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return unwrap(this$._email);
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}
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set EMail(email) {
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const this$ = this;
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this$._email = email;
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}
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get Phone() {
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const this$ = this;
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return unwrap(this$._phone);
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}
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set Phone(phone) {
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const this$ = this;
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this$._phone = phone;
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}
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get Fax() {
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const this$ = this;
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return unwrap(this$._fax);
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}
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set Fax(fax) {
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const this$ = this;
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this$._fax = fax;
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}
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get Roles() {
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const this$ = this;
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return this$._roles;
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}
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set Roles(roles) {
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const this$ = this;
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this$._roles = roles;
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}
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get Comments() {
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const this$ = this;
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return this$._comments;
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}
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set Comments(comments) {
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const this$ = this;
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this$._comments = comments;
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}
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static make(orcid, lastName, firstName, midInitials, email, phone, fax, address, affiliation, roles, comments) {
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return new Person(unwrap(orcid), unwrap(lastName), unwrap(firstName), unwrap(midInitials), unwrap(email), unwrap(phone), unwrap(fax), unwrap(address), unwrap(affiliation), roles, comments);
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}
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static create(orcid, lastName, firstName, midInitials, email, phone, fax, address, affiliation, roles, comments) {
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const roles_1 = defaultArg(roles, []);
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const comments_1 = defaultArg(comments, []);
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return Person.make(orcid, lastName, firstName, midInitials, email, phone, fax, address, affiliation, roles_1, comments_1);
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}
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static get empty() {
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return Person.create();
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}
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static tryGetByFullName(firstName, midInitials, lastName, persons) {
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return tryFind((p) => {
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if (midInitials === "") {
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if (equals(p.FirstName, firstName)) {
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return equals(p.LastName, lastName);
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} else {
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return false;
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}
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} else if (equals(p.FirstName, firstName) && equals(p.MidInitials, midInitials)) {
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return equals(p.LastName, lastName);
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} else {
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return false;
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}
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}, persons);
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}
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static existsByFullName(firstName, midInitials, lastName, persons) {
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return persons.some((p) => midInitials === "" ? equals(p.FirstName, firstName) && equals(p.LastName, lastName) : equals(p.FirstName, firstName) && equals(p.MidInitials, midInitials) && equals(p.LastName, lastName));
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}
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static add(persons, person) {
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return append(persons, singleton(person));
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}
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static removeByFullName(firstName, midInitials, lastName, persons) {
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return persons.filter((p) => midInitials === "" ? !(equals(p.FirstName, firstName) && equals(p.LastName, lastName)) : !(equals(p.FirstName, firstName) && equals(p.MidInitials, midInitials) && equals(p.LastName, lastName)));
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}
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Copy() {
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const this$ = this;
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const nextComments = ResizeArray_map((c) => c.Copy(), this$.Comments);
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const nextRoles = ResizeArray_map((c_1) => c_1.Copy(), this$.Roles);
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const orcid = this$.ORCID;
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const lastName = this$.LastName;
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const firstName = this$.FirstName;
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const midInitials = this$.MidInitials;
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const email = this$.EMail;
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const phone = this$.Phone;
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const fax = this$.Fax;
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const address = this$.Address;
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const affiliation = this$.Affiliation;
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return Person.make(orcid, lastName, firstName, midInitials, email, phone, fax, address, affiliation, nextRoles, nextComments);
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}
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GetHashCode() {
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const this$ = this;
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return boxHashArray([boxHashOption(this$.ORCID), boxHashOption(this$.LastName), boxHashOption(this$.FirstName), boxHashOption(this$.MidInitials), boxHashOption(this$.EMail), boxHashOption(this$.Phone), boxHashOption(this$.Fax), boxHashOption(this$.Address), boxHashOption(this$.Affiliation), boxHashSeq(this$.Roles), boxHashSeq(this$.Comments)]) | 0;
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}
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Equals(obj) {
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const this$ = this;
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return hash(this$) === hash(obj);
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}
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toString() {
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let arg, arg_1;
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const this$ = this;
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const sb = StringBuilder_$ctor();
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StringBuilder__Append_Z721C83C5(sb, "Person {\n ");
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StringBuilder__Append_Z721C83C5(sb, join(",\n ", map((tupledArg_1) => toText(printf("%s = %A"))(tupledArg_1[0])(tupledArg_1[1]), choose((tupledArg) => map$1((o) => [tupledArg[0], o], tupledArg[1]), ofArray([["FirstName", this$.FirstName], ["LastName", this$.LastName], ["MidInitials", this$.MidInitials], ["EMail", this$.EMail], ["Phone", this$.Phone], ["Address", this$.Address], ["Affiliation", this$.Affiliation], ["Fax", this$.Fax], ["ORCID", this$.ORCID], ["Roles", length(this$.Roles) > 0 ? (arg = this$.Roles, toText(printf("%A"))(arg)) : void 0], ["Comments", length(this$.Comments) > 0 ? (arg_1 = this$.Comments, toText(printf("%A"))(arg_1)) : void 0]])))));
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StringBuilder__Append_Z721C83C5(sb, "\n}");
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return toString(sb);
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}
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}
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export { Person };
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import { tryParse } from '../../../node_modules/@fable-org/fable-library-js/Int32.js';
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import { FSharpRef } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
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import { bind, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
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import { Comment$ } from '../Comment.js';
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import { equals, int32ToString } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
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import { tryItem } from '../CommentList.js';
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import { findIndex } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
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import '../Helper/Url.js';
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function tryInt(str) {
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let matchValue;
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let outArg = 0;
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matchValue = [tryParse(str, 511, false, 32, new FSharpRef(() => outArg, (v) => {
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outArg = v | 0;
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})), outArg];
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if (matchValue[0]) {
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return matchValue[1];
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} else {
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return void 0;
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}
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}
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const orderName = "ColumnIndex";
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function createOrderComment(index) {
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return Comment$.create(orderName, int32ToString(index));
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}
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+
function tryGetIndex(comments) {
|
|
27
|
+
const matchValue = tryItem(orderName, comments);
|
|
28
|
+
if (matchValue != null) {
|
|
29
|
+
const ci = value(matchValue);
|
|
30
|
+
const i = findIndex((c) => equals(c.Name, orderName), comments) | 0;
|
|
31
|
+
comments.splice(i, 1);
|
|
32
|
+
return tryInt(ci);
|
|
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|
+
} else {
|
|
34
|
+
return void 0;
|
|
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|
+
}
|
|
36
|
+
}
|
|
37
|
+
function setOntologyAnnotationIndexInplace(i, oa) {
|
|
38
|
+
void oa.Comments.push(createOrderComment(i));
|
|
39
|
+
}
|
|
40
|
+
function setOntologyAnnotationIndex(i, oa) {
|
|
41
|
+
const oac = oa.Copy();
|
|
42
|
+
setOntologyAnnotationIndexInplace(i, oac);
|
|
43
|
+
return oac;
|
|
44
|
+
}
|
|
45
|
+
function tryGetParameterIndex(param) {
|
|
46
|
+
return bind((oa) => tryGetIndex(oa.Comments), param.ParameterName);
|
|
47
|
+
}
|
|
48
|
+
function tryGetParameterColumnIndex(paramValue) {
|
|
49
|
+
return bind(tryGetParameterIndex, paramValue.Category);
|
|
50
|
+
}
|
|
51
|
+
function tryGetFactorIndex(factor) {
|
|
52
|
+
return bind((oa) => tryGetIndex(oa.Comments), factor.FactorType);
|
|
53
|
+
}
|
|
54
|
+
function tryGetFactorColumnIndex(factorValue) {
|
|
55
|
+
return bind(tryGetFactorIndex, factorValue.Category);
|
|
56
|
+
}
|
|
57
|
+
function tryGetCharacteristicIndex(characteristic) {
|
|
58
|
+
return bind((oa) => tryGetIndex(oa.Comments), characteristic.CharacteristicType);
|
|
59
|
+
}
|
|
60
|
+
function tryGetCharacteristicColumnIndex(characteristicValue) {
|
|
61
|
+
return bind(tryGetCharacteristicIndex, characteristicValue.Category);
|
|
62
|
+
}
|
|
63
|
+
function tryGetComponentIndex(comp) {
|
|
64
|
+
return bind((oa) => tryGetIndex(oa.Comments), comp.ComponentType);
|
|
65
|
+
}
|
|
66
|
+
function ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static(i, oa) {
|
|
67
|
+
return setOntologyAnnotationIndex(i, oa);
|
|
68
|
+
}
|
|
69
|
+
function ARCtrl_OntologyAnnotation__OntologyAnnotation_SetColumnIndex_Z524259A4(this$, i) {
|
|
70
|
+
setOntologyAnnotationIndexInplace(i, this$);
|
|
71
|
+
}
|
|
72
|
+
|
|
73
|
+
export { ARCtrl_OntologyAnnotation__OntologyAnnotation_SetColumnIndex_Z524259A4, ARCtrl_OntologyAnnotation__OntologyAnnotation_setColumnIndex_Static, createOrderComment, orderName, setOntologyAnnotationIndex, setOntologyAnnotationIndexInplace, tryGetCharacteristicColumnIndex, tryGetCharacteristicIndex, tryGetComponentIndex, tryGetFactorColumnIndex, tryGetFactorIndex, tryGetIndex, tryGetParameterColumnIndex, tryGetParameterIndex };
|
|
@@ -0,0 +1,121 @@
|
|
|
1
|
+
import { value, map, unwrap, defaultArg } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
2
|
+
import { OntologyAnnotation } from '../OntologyAnnotation.js';
|
|
3
|
+
import { Value, Value_Ontology, Value_Name } from '../Value.js';
|
|
4
|
+
import { Record } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
5
|
+
import { ActivePatterns_$007CRegex$007C_$007C } from '../Helper/Regex.js';
|
|
6
|
+
import { Option_fromValueWithDefault } from '../Helper/Collections.js';
|
|
7
|
+
|
|
8
|
+
class Component extends Record {
|
|
9
|
+
constructor(ComponentValue, ComponentUnit, ComponentType) {
|
|
10
|
+
super();
|
|
11
|
+
this.ComponentValue = ComponentValue;
|
|
12
|
+
this.ComponentUnit = ComponentUnit;
|
|
13
|
+
this.ComponentType = ComponentType;
|
|
14
|
+
}
|
|
15
|
+
AlternateName() {
|
|
16
|
+
const this$ = this;
|
|
17
|
+
return Component__get_ComponentName(this$);
|
|
18
|
+
}
|
|
19
|
+
MeasurementMethod() {
|
|
20
|
+
return void 0;
|
|
21
|
+
}
|
|
22
|
+
Description() {
|
|
23
|
+
return void 0;
|
|
24
|
+
}
|
|
25
|
+
GetCategory() {
|
|
26
|
+
const this$ = this;
|
|
27
|
+
return this$.ComponentType;
|
|
28
|
+
}
|
|
29
|
+
GetAdditionalType() {
|
|
30
|
+
return "Component";
|
|
31
|
+
}
|
|
32
|
+
GetValue() {
|
|
33
|
+
const this$ = this;
|
|
34
|
+
return this$.ComponentValue;
|
|
35
|
+
}
|
|
36
|
+
GetUnit() {
|
|
37
|
+
const this$ = this;
|
|
38
|
+
return this$.ComponentUnit;
|
|
39
|
+
}
|
|
40
|
+
}
|
|
41
|
+
function Component__get_ComponentName(this$) {
|
|
42
|
+
return map((v) => Component_composeName(v, this$.ComponentUnit), this$.ComponentValue);
|
|
43
|
+
}
|
|
44
|
+
function Component_make(value, unit, componentType) {
|
|
45
|
+
return new Component(value, unit, componentType);
|
|
46
|
+
}
|
|
47
|
+
function Component_create_Z2F0B38C7(value, unit, componentType) {
|
|
48
|
+
return Component_make(value, unit, componentType);
|
|
49
|
+
}
|
|
50
|
+
function Component_composeName(value$1, unit) {
|
|
51
|
+
if (value$1.tag === /* Ontology */
|
|
52
|
+
0) {
|
|
53
|
+
const oa = value$1.fields[0];
|
|
54
|
+
return `${oa.NameText} (${oa.TermAccessionShort})`;
|
|
55
|
+
} else if (unit != null) {
|
|
56
|
+
const u = value(unit);
|
|
57
|
+
return `${value$1.Text} ${u.NameText} (${u.TermAccessionShort})`;
|
|
58
|
+
} else {
|
|
59
|
+
return `${value$1.Text}`;
|
|
60
|
+
}
|
|
61
|
+
}
|
|
62
|
+
function Component_decomposeName_Z721C83C5(name) {
|
|
63
|
+
const activePatternResult = ActivePatterns_$007CRegex$007C_$007C("^(?<value>[\\d\\.]+) (?<unit>.+) \\((?<ontology>[^(]*:[^)]*)\\)", name);
|
|
64
|
+
if (activePatternResult != null) {
|
|
65
|
+
const unitr = value(activePatternResult);
|
|
66
|
+
let oa;
|
|
67
|
+
const tan = unitr.groups && unitr.groups.ontology || "";
|
|
68
|
+
oa = OntologyAnnotation.fromTermAnnotation(tan);
|
|
69
|
+
let v;
|
|
70
|
+
const value$1 = unitr.groups && unitr.groups.value || "";
|
|
71
|
+
v = Value.fromString(value$1);
|
|
72
|
+
const u = unitr.groups && unitr.groups.unit || "";
|
|
73
|
+
oa.Name = u;
|
|
74
|
+
return [v, oa];
|
|
75
|
+
} else {
|
|
76
|
+
const activePatternResult_1 = ActivePatterns_$007CRegex$007C_$007C("^(?<value>[^\\(]+) \\((?<ontology>[^(]*:[^)]*)\\)", name);
|
|
77
|
+
if (activePatternResult_1 != null) {
|
|
78
|
+
const r = value(activePatternResult_1);
|
|
79
|
+
let oa_1;
|
|
80
|
+
const tan_1 = r.groups && r.groups.ontology || "";
|
|
81
|
+
oa_1 = OntologyAnnotation.fromTermAnnotation(tan_1);
|
|
82
|
+
const v_1 = r.groups && r.groups.value || "";
|
|
83
|
+
oa_1.Name = v_1;
|
|
84
|
+
return [Value_Ontology(oa_1), void 0];
|
|
85
|
+
} else {
|
|
86
|
+
const activePatternResult_2 = ActivePatterns_$007CRegex$007C_$007C("^(?<value>[^\\(\\)]+) \\(\\)", name);
|
|
87
|
+
if (activePatternResult_2 != null) {
|
|
88
|
+
const r_1 = value(activePatternResult_2);
|
|
89
|
+
return [Value_Ontology(new OntologyAnnotation(r_1.groups && r_1.groups.value || "")), void 0];
|
|
90
|
+
} else {
|
|
91
|
+
return [Value_Name(name), void 0];
|
|
92
|
+
}
|
|
93
|
+
}
|
|
94
|
+
}
|
|
95
|
+
}
|
|
96
|
+
function Component_fromISAString_7C9A7CF8(name, term, source, accession, comments) {
|
|
97
|
+
let cType;
|
|
98
|
+
const v = OntologyAnnotation.create(unwrap(term), unwrap(source), unwrap(accession), unwrap(comments));
|
|
99
|
+
cType = Option_fromValueWithDefault(new OntologyAnnotation(), v);
|
|
100
|
+
if (name == null) {
|
|
101
|
+
return Component_make(void 0, void 0, cType);
|
|
102
|
+
} else {
|
|
103
|
+
const patternInput = Component_decomposeName_Z721C83C5(value(name));
|
|
104
|
+
return Component_make(Option_fromValueWithDefault(Value_Name(""), patternInput[0]), patternInput[1], cType);
|
|
105
|
+
}
|
|
106
|
+
}
|
|
107
|
+
function Component_toStringObject_Z685B8F25(c) {
|
|
108
|
+
let oa_1;
|
|
109
|
+
const value = {
|
|
110
|
+
TermAccessionNumber: "",
|
|
111
|
+
TermName: "",
|
|
112
|
+
TermSourceREF: ""
|
|
113
|
+
};
|
|
114
|
+
oa_1 = defaultArg(map((oa) => OntologyAnnotation.toStringObject(oa), c.ComponentType), value);
|
|
115
|
+
return [defaultArg(Component__get_ComponentName(c), ""), oa_1];
|
|
116
|
+
}
|
|
117
|
+
function Component_createAsPV(alternateName, measurementMethod, description, category, value, unit) {
|
|
118
|
+
return Component_create_Z2F0B38C7(unwrap(value), unwrap(unit), unwrap(category));
|
|
119
|
+
}
|
|
120
|
+
|
|
121
|
+
export { Component, Component__get_ComponentName, Component_composeName, Component_createAsPV, Component_create_Z2F0B38C7, Component_decomposeName_Z721C83C5, Component_fromISAString_7C9A7CF8, Component_make, Component_toStringObject_Z685B8F25 };
|
|
@@ -0,0 +1,104 @@
|
|
|
1
|
+
import { unwrap, defaultArg, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
2
|
+
import { OntologyAnnotation } from '../OntologyAnnotation.js';
|
|
3
|
+
import { equals } from '../../../node_modules/@fable-org/fable-library-js/Util.js';
|
|
4
|
+
import { tryFind, exists, append, singleton, filter } from '../../../node_modules/@fable-org/fable-library-js/List.js';
|
|
5
|
+
import { Record, toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
6
|
+
import { Option_fromValueWithDefault, ResizeArray_map } from '../Helper/Collections.js';
|
|
7
|
+
|
|
8
|
+
class Factor extends Record {
|
|
9
|
+
constructor(Name, FactorType, Comments) {
|
|
10
|
+
super();
|
|
11
|
+
this.Name = Name;
|
|
12
|
+
this.FactorType = FactorType;
|
|
13
|
+
this.Comments = Comments;
|
|
14
|
+
}
|
|
15
|
+
static make(name, factorType, comments) {
|
|
16
|
+
return new Factor(name, factorType, comments);
|
|
17
|
+
}
|
|
18
|
+
static create(Name, FactorType, Comments) {
|
|
19
|
+
return Factor.make(Name, FactorType, Comments);
|
|
20
|
+
}
|
|
21
|
+
static get empty() {
|
|
22
|
+
return Factor.create();
|
|
23
|
+
}
|
|
24
|
+
static fromString(name, term, source, accession, comments) {
|
|
25
|
+
const oa = OntologyAnnotation.create(term, source, accession, unwrap(comments));
|
|
26
|
+
const name_1 = Option_fromValueWithDefault("", name);
|
|
27
|
+
const factorType = Option_fromValueWithDefault(new OntologyAnnotation(), oa);
|
|
28
|
+
return Factor.make(name_1, factorType, void 0);
|
|
29
|
+
}
|
|
30
|
+
static toStringObject(factor) {
|
|
31
|
+
const value = {
|
|
32
|
+
TermAccessionNumber: "",
|
|
33
|
+
TermName: "",
|
|
34
|
+
TermSourceREF: ""
|
|
35
|
+
};
|
|
36
|
+
return defaultArg(map((oa) => OntologyAnnotation.toStringObject(oa), factor.FactorType), value);
|
|
37
|
+
}
|
|
38
|
+
get NameText() {
|
|
39
|
+
const this$ = this;
|
|
40
|
+
return defaultArg(this$.Name, "");
|
|
41
|
+
}
|
|
42
|
+
MapCategory(f) {
|
|
43
|
+
const this$ = this;
|
|
44
|
+
return new Factor(this$.Name, map(f, this$.FactorType), this$.Comments);
|
|
45
|
+
}
|
|
46
|
+
SetCategory(c) {
|
|
47
|
+
const this$ = this;
|
|
48
|
+
return new Factor(this$.Name, c, this$.Comments);
|
|
49
|
+
}
|
|
50
|
+
static tryGetByName(name, factors) {
|
|
51
|
+
return tryFind((f) => equals(f.Name, name), factors);
|
|
52
|
+
}
|
|
53
|
+
static existsByName(name, factors) {
|
|
54
|
+
return exists((f) => equals(f.Name, name), factors);
|
|
55
|
+
}
|
|
56
|
+
static add(factors, factor) {
|
|
57
|
+
return append(factors, singleton(factor));
|
|
58
|
+
}
|
|
59
|
+
static removeByName(name, factors) {
|
|
60
|
+
return filter((f) => !equals(f.Name, name), factors);
|
|
61
|
+
}
|
|
62
|
+
static getComments(factor) {
|
|
63
|
+
return factor.Comments;
|
|
64
|
+
}
|
|
65
|
+
static mapComments(f, factor) {
|
|
66
|
+
return new Factor(factor.Name, factor.FactorType, map(f, factor.Comments));
|
|
67
|
+
}
|
|
68
|
+
static setComments(factor, comments) {
|
|
69
|
+
return new Factor(factor.Name, factor.FactorType, comments);
|
|
70
|
+
}
|
|
71
|
+
static getFactorType(factor) {
|
|
72
|
+
return factor.FactorType;
|
|
73
|
+
}
|
|
74
|
+
static mapFactorType(f, factor) {
|
|
75
|
+
return new Factor(factor.Name, map(f, factor.FactorType), factor.Comments);
|
|
76
|
+
}
|
|
77
|
+
static setFactorType(factor, factorType) {
|
|
78
|
+
return new Factor(factor.Name, factorType, factor.Comments);
|
|
79
|
+
}
|
|
80
|
+
static tryGetName(f) {
|
|
81
|
+
return f.Name;
|
|
82
|
+
}
|
|
83
|
+
static getNameAsString(f) {
|
|
84
|
+
return f.NameText;
|
|
85
|
+
}
|
|
86
|
+
static nameEqualsString(name, f) {
|
|
87
|
+
return f.NameText === name;
|
|
88
|
+
}
|
|
89
|
+
Copy() {
|
|
90
|
+
const this$ = this;
|
|
91
|
+
const comments = map((a) => ResizeArray_map((c) => c.Copy(), a), this$.Comments);
|
|
92
|
+
return Factor.make(this$.Name, this$.FactorType, comments);
|
|
93
|
+
}
|
|
94
|
+
Print() {
|
|
95
|
+
const this$ = this;
|
|
96
|
+
return toString(this$);
|
|
97
|
+
}
|
|
98
|
+
PrintCompact() {
|
|
99
|
+
const this$ = this;
|
|
100
|
+
return "OA " + this$.NameText;
|
|
101
|
+
}
|
|
102
|
+
}
|
|
103
|
+
|
|
104
|
+
export { Factor };
|
|
@@ -0,0 +1,68 @@
|
|
|
1
|
+
import { Record, toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
2
|
+
import { map, value, bind, unwrap } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
3
|
+
import { Factor } from './Factor.js';
|
|
4
|
+
import '../Helper/Url.js';
|
|
5
|
+
|
|
6
|
+
class FactorValue extends Record {
|
|
7
|
+
constructor(ID, Category, Value, Unit) {
|
|
8
|
+
super();
|
|
9
|
+
this.ID = ID;
|
|
10
|
+
this.Category = Category;
|
|
11
|
+
this.Value = Value;
|
|
12
|
+
this.Unit = Unit;
|
|
13
|
+
}
|
|
14
|
+
Print() {
|
|
15
|
+
const this$ = this;
|
|
16
|
+
return toString(this$);
|
|
17
|
+
}
|
|
18
|
+
PrintCompact() {
|
|
19
|
+
let value_2, category_2, category_1, value_1;
|
|
20
|
+
const this$ = this;
|
|
21
|
+
const category = map((f) => f.NameText, this$.Category);
|
|
22
|
+
const unit = map((oa) => oa.NameText, this$.Unit);
|
|
23
|
+
const value$1 = map((v) => {
|
|
24
|
+
const s = v.PrintCompact();
|
|
25
|
+
if (unit == null) {
|
|
26
|
+
return s;
|
|
27
|
+
} else {
|
|
28
|
+
return s + " " + value(unit);
|
|
29
|
+
}
|
|
30
|
+
}, this$.Value);
|
|
31
|
+
return category == null ? value$1 == null ? "" : (value_2 = value(value$1), value_2) : value$1 == null ? (category_2 = value(category), category_2 + ":No Value") : (category_1 = value(category), value_1 = value(value$1), category_1 + ":" + value_1);
|
|
32
|
+
}
|
|
33
|
+
AlternateName() {
|
|
34
|
+
return void 0;
|
|
35
|
+
}
|
|
36
|
+
MeasurementMethod() {
|
|
37
|
+
return void 0;
|
|
38
|
+
}
|
|
39
|
+
Description() {
|
|
40
|
+
return void 0;
|
|
41
|
+
}
|
|
42
|
+
GetCategory() {
|
|
43
|
+
const this$ = this;
|
|
44
|
+
return bind((f) => f.FactorType, this$.Category);
|
|
45
|
+
}
|
|
46
|
+
GetValue() {
|
|
47
|
+
const this$ = this;
|
|
48
|
+
return this$.Value;
|
|
49
|
+
}
|
|
50
|
+
GetUnit() {
|
|
51
|
+
const this$ = this;
|
|
52
|
+
return this$.Unit;
|
|
53
|
+
}
|
|
54
|
+
GetAdditionalType() {
|
|
55
|
+
return "FactorValue";
|
|
56
|
+
}
|
|
57
|
+
}
|
|
58
|
+
function FactorValue_make(id, category, value, unit) {
|
|
59
|
+
return new FactorValue(id, category, value, unit);
|
|
60
|
+
}
|
|
61
|
+
function FactorValue_create_30BDC49(Id, Category, Value, Unit) {
|
|
62
|
+
return FactorValue_make(Id, Category, Value, Unit);
|
|
63
|
+
}
|
|
64
|
+
function FactorValue_createAsPV(alternateName, measurementMethod, description, category, value, unit) {
|
|
65
|
+
return FactorValue_create_30BDC49(void 0, unwrap(map((c) => Factor.create(void 0, c), category)), unwrap(value), unwrap(unit));
|
|
66
|
+
}
|
|
67
|
+
|
|
68
|
+
export { FactorValue, FactorValue_createAsPV, FactorValue_create_30BDC49, FactorValue_make };
|
|
@@ -0,0 +1,49 @@
|
|
|
1
|
+
import { Record, toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
2
|
+
import { length, empty } from '../../../node_modules/@fable-org/fable-library-js/List.js';
|
|
3
|
+
import { defaultArg, value } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
4
|
+
import '../Helper/Url.js';
|
|
5
|
+
import { toText, printf } from '../../../node_modules/@fable-org/fable-library-js/String.js';
|
|
6
|
+
import { MaterialType__get_AsString } from './MaterialType.js';
|
|
7
|
+
|
|
8
|
+
class Material extends Record {
|
|
9
|
+
constructor(ID, Name, MaterialType, Characteristics, DerivesFrom) {
|
|
10
|
+
super();
|
|
11
|
+
this.ID = ID;
|
|
12
|
+
this.Name = Name;
|
|
13
|
+
this.MaterialType = MaterialType;
|
|
14
|
+
this.Characteristics = Characteristics;
|
|
15
|
+
this.DerivesFrom = DerivesFrom;
|
|
16
|
+
}
|
|
17
|
+
Print() {
|
|
18
|
+
const this$ = this;
|
|
19
|
+
return toString(this$);
|
|
20
|
+
}
|
|
21
|
+
PrintCompact() {
|
|
22
|
+
const this$ = this;
|
|
23
|
+
const chars = length(defaultArg(this$.Characteristics, empty())) | 0;
|
|
24
|
+
const matchValue = this$.MaterialType;
|
|
25
|
+
if (matchValue == null) {
|
|
26
|
+
const arg_3 = Material__get_NameText(this$);
|
|
27
|
+
return toText(printf("%s [%i characteristics]"))(arg_3)(chars);
|
|
28
|
+
} else {
|
|
29
|
+
const t = value(matchValue);
|
|
30
|
+
const arg = Material__get_NameText(this$);
|
|
31
|
+
const arg_1 = MaterialType__get_AsString(t);
|
|
32
|
+
return toText(printf("%s [%s; %i characteristics]"))(arg)(arg_1)(chars);
|
|
33
|
+
}
|
|
34
|
+
}
|
|
35
|
+
}
|
|
36
|
+
function Material_make(id, name, materialType, characteristics, derivesFrom) {
|
|
37
|
+
return new Material(id, name, materialType, characteristics, derivesFrom);
|
|
38
|
+
}
|
|
39
|
+
function Material_create_Z66909A6D(Id, Name, MaterialType, Characteristics, DerivesFrom) {
|
|
40
|
+
return Material_make(Id, Name, MaterialType, Characteristics, DerivesFrom);
|
|
41
|
+
}
|
|
42
|
+
function Material__get_NameText(this$) {
|
|
43
|
+
return defaultArg(this$.Name, "");
|
|
44
|
+
}
|
|
45
|
+
function Material_setCharacteristicValues(values, m) {
|
|
46
|
+
return new Material(m.ID, m.Name, m.MaterialType, values, m.DerivesFrom);
|
|
47
|
+
}
|
|
48
|
+
|
|
49
|
+
export { Material, Material__get_NameText, Material_create_Z66909A6D, Material_make, Material_setCharacteristicValues };
|
|
@@ -0,0 +1,30 @@
|
|
|
1
|
+
import { Record, toString } from '../../../node_modules/@fable-org/fable-library-js/Types.js';
|
|
2
|
+
import { defaultArg, map } from '../../../node_modules/@fable-org/fable-library-js/Option.js';
|
|
3
|
+
import '../Helper/Url.js';
|
|
4
|
+
|
|
5
|
+
class MaterialAttribute extends Record {
|
|
6
|
+
constructor(ID, CharacteristicType) {
|
|
7
|
+
super();
|
|
8
|
+
this.ID = ID;
|
|
9
|
+
this.CharacteristicType = CharacteristicType;
|
|
10
|
+
}
|
|
11
|
+
Print() {
|
|
12
|
+
const this$ = this;
|
|
13
|
+
return toString(this$);
|
|
14
|
+
}
|
|
15
|
+
PrintCompact() {
|
|
16
|
+
const this$ = this;
|
|
17
|
+
return "OA " + MaterialAttribute__get_NameText(this$);
|
|
18
|
+
}
|
|
19
|
+
}
|
|
20
|
+
function MaterialAttribute_make(id, characteristicType) {
|
|
21
|
+
return new MaterialAttribute(id, characteristicType);
|
|
22
|
+
}
|
|
23
|
+
function MaterialAttribute_create_A220A8A(Id, CharacteristicType) {
|
|
24
|
+
return MaterialAttribute_make(Id, CharacteristicType);
|
|
25
|
+
}
|
|
26
|
+
function MaterialAttribute__get_NameText(this$) {
|
|
27
|
+
return defaultArg(map((oa) => oa.NameText, this$.CharacteristicType), "");
|
|
28
|
+
}
|
|
29
|
+
|
|
30
|
+
export { MaterialAttribute, MaterialAttribute__get_NameText, MaterialAttribute_create_A220A8A, MaterialAttribute_make };
|