@mycelish/cli 0.1.0 → 0.2.0

package/dist/core/state-verifier.js

@@ -0,0 +1,159 @@
+/**
+ * State Verifier — checks both mycelium manifest AND actual tool config files.
+ *
+ * Answers the question: "Is item X truly disabled/absent in tool Y's config?"
+ * Works for all item types (skill, mcp, hook, memory, agent, command)
+ * and all 9 tools.
+ */
+import * as fs from "node:fs/promises";
+import * as path from "node:path";
+import * as jsonc from "jsonc-parser";
+import { ALL_TOOL_IDS, TOOL_REGISTRY, resolvePath, } from "@mycelish/core";
+import { readFileIfExists } from "./fs-helpers.js";
+import { getItemState } from "./manifest-state.js";
+// ============================================================================
+// Tool Config Readers (by item type)
+// ============================================================================
+/** Check if an MCP entry exists in a tool's config file */
+async function checkMcpInTool(name, toolId) {
+    const desc = TOOL_REGISTRY[toolId];
+    const configPath = resolvePath(desc.paths.mcp);
+    if (!configPath)
+        return { present: false, configPath: null, details: "no mcp path configured" };
+    const content = await readFileIfExists(configPath);
+    if (!content)
+        return { present: false, configPath, details: "config file not found" };
+    try {
+        // TOML: simple regex check for section header
+        if (desc.mcp.format === "toml") {
+            return { present: parseMcpFromToml(content, name), configPath };
+        }
+        const parsed = desc.mcp.format === "jsonc"
+            ? jsonc.parse(content)
+            : JSON.parse(content);
+        // Navigate nested key (e.g., "mcpServers" or "settings.mcpServers")
+        const mcpSection = getNestedKey(parsed, desc.mcp.key);
+        if (!mcpSection || typeof mcpSection !== "object") {
+            return { present: false, configPath, details: `no ${desc.mcp.key} section` };
+        }
+        // OpenClaw uses array format
+        if (desc.mcp.entryShape === "openclaw") {
+            const entries = mcpSection.entries;
+            if (Array.isArray(entries)) {
+                const found = entries.some((e) => e.name === name && e.type === "mcp-adapter");
+                return { present: found, configPath };
+            }
+            return { present: false, configPath };
+        }
+        // Standard: check if name is a key in the mcpServers object
+        const present = name in mcpSection;
+        return { present, configPath };
+    }
+    catch {
+        return { present: false, configPath, details: "failed to parse config" };
+    }
+}
+/** Check if a skill/agent/command directory/symlink exists in a tool's dir */
+async function checkFileInToolDir(name, toolId, pathKey) {
+    const desc = TOOL_REGISTRY[toolId];
+    const dirPath = resolvePath(desc.paths[pathKey]);
+    if (!dirPath)
+        return { present: false, configPath: null, details: `no ${pathKey} path configured` };
+    try {
+        // Check if name exists as file, dir, or symlink in the tool's directory
+        await fs.access(path.join(dirPath, name));
+        return { present: true, configPath: dirPath };
+    }
+    catch {
+        // Also check with common extensions
+        for (const ext of [".md", ".yaml", ".yml"]) {
+            try {
+                await fs.access(path.join(dirPath, name + ext));
+                return { present: true, configPath: dirPath };
+            }
+            catch { /* continue */ }
+        }
+        return { present: false, configPath: dirPath };
+    }
+}
+/** Check if a memory file exists in a tool's memory directory */
+async function checkMemoryInTool(name, toolId) {
+    return checkFileInToolDir(name, toolId, "globalMemory");
+}
+// ============================================================================
+// Helpers
+// ============================================================================
+function getNestedKey(obj, key) {
+    const parts = key.split(".");
+    let current = obj;
+    for (const part of parts) {
+        if (current == null || typeof current !== "object")
+            return undefined;
+        current = current[part];
+    }
+    return current;
+}
+function parseMcpFromToml(content, name) {
+    // Simple check: look for [mcpServers.name] section header
+    const pattern = new RegExp(`\\[mcpServers\\.${name.replace(/[.*+?^${}()|[\]\\]/g, "\\$&")}\\]`);
+    return pattern.test(content);
+}
+/** Map item type → which tool path to check */
+const TYPE_TO_CHECK = {
+    mcp: checkMcpInTool,
+    skill: (name, toolId) => checkFileInToolDir(name, toolId, "skills"),
+    agent: (name, toolId) => checkFileInToolDir(name, toolId, "agents"),
+    command: (name, toolId) => checkFileInToolDir(name, toolId, "skills"), // commands live in skills dir
+    hook: (name, toolId) => checkFileInToolDir(name, toolId, "hooks"),
+    memory: checkMemoryInTool,
+};
+// ============================================================================
+// Main Verification Function
+// ============================================================================
+/**
+ * Verify an item's state across both manifest AND actual tool configs.
+ *
+ * @param name - Item name (e.g., "code-reviewer", "postgres-mcp")
+ * @param opts.projectRoot - Project root for project-level manifest
+ * @param opts.tool - Single tool to check (default: all installed tools)
+ * @param opts.type - Override item type if not in manifest (e.g., "agent")
+ */
+export async function verifyItemState(name, opts) {
+    // 1. Get manifest state
+    const manifestState = await getItemState(name, opts);
+    // 2. Determine item type
+    const itemType = opts?.type ?? manifestState.type ?? "skill";
+    // 3. Determine which tools to check
+    const toolIds = opts?.tool ? [opts.tool] : ALL_TOOL_IDS;
+    // 4. Check actual tool configs
+    const checker = TYPE_TO_CHECK[itemType];
+    const toolPresence = [];
+    for (const toolId of toolIds) {
+        const desc = TOOL_REGISTRY[toolId];
+        const result = await checker(name, toolId);
+        toolPresence.push({
+            toolId,
+            toolName: desc.display.name,
+            presentInConfig: result.present,
+            configPath: result.configPath,
+            details: result.details,
+        });
+    }
+    // 5. Detect drift — manifest says disabled but tool still has item
+    const drifted = [];
+    const manifestDisabled = manifestState.state === "disabled" || manifestState.state === "deleted";
+    if (manifestDisabled) {
+        for (const tp of toolPresence) {
+            if (tp.presentInConfig) {
+                drifted.push(`${tp.toolName}: item still present in config (${tp.configPath})`);
+            }
+        }
+    }
+    return {
+        ...manifestState,
+        type: itemType,
+        toolPresence,
+        drifted,
+    };
+}
+//# sourceMappingURL=state-verifier.js.map

package/dist/core/state-verifier.js.map

@@ -0,0 +1 @@
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package/dist/core/state-verifier.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=state-verifier.test.d.ts.map

package/dist/core/state-verifier.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"state-verifier.test.d.ts","sourceRoot":"","sources":["../../src/core/state-verifier.test.ts"],"names":[],"mappings":""}

package/dist/core/state-verifier.test.js

@@ -0,0 +1,188 @@
+import { describe, it, expect, vi, beforeEach } from "vitest";
+import * as fs from "node:fs/promises";
+vi.mock("node:fs/promises", () => ({
+    readFile: vi.fn(),
+    writeFile: vi.fn(),
+    access: vi.fn(),
+}));
+vi.mock("@mycelish/core", async (importOriginal) => {
+    const actual = await importOriginal();
+    return {
+        ...actual,
+        expandPath: (p) => p.replace("~", "/mock/home"),
+    };
+});
+const MANIFEST_YAML = await import("yaml");
+function makeManifest(sections) {
+    return MANIFEST_YAML.stringify({ version: "1.0.0", ...sections });
+}
+describe("state-verifier", () => {
+    beforeEach(() => {
+        vi.resetAllMocks();
+    });
+    describe("verifyItemState", () => {
+        it("returns manifest state + tool presence for a disabled skill", async () => {
+            // Manifest: skill disabled
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ skills: { "my-skill": { state: "disabled" } } });
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockRejectedValue(new Error("ENOENT"));
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("my-skill", { tool: "claude-code" });
+            expect(result.found).toBe(true);
+            expect(result.state).toBe("disabled");
+            expect(result.toolPresence).toHaveLength(1);
+            expect(result.toolPresence[0].toolId).toBe("claude-code");
+            expect(result.toolPresence[0].presentInConfig).toBe(false);
+            expect(result.drifted).toHaveLength(0);
+        });
+        it("detects drift — manifest disabled but MCP still in tool config", async () => {
+            const mcpConfig = JSON.stringify({
+                mcpServers: { "my-mcp": { command: "npx", args: ["my-mcp"] } },
+            });
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ mcps: { "my-mcp": { state: "disabled" } } });
+                }
+                if (path.includes(".claude.json")) {
+                    return mcpConfig;
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockResolvedValue(undefined);
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("my-mcp", { tool: "claude-code", type: "mcp" });
+            expect(result.state).toBe("disabled");
+            expect(result.toolPresence[0].presentInConfig).toBe(true);
+            expect(result.drifted).toHaveLength(1);
+            expect(result.drifted[0]).toContain("Claude Code");
+        });
+        it("checks all 9 tools when no tool filter specified", async () => {
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ agents: { "my-agent": { state: "enabled" } } });
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockRejectedValue(new Error("ENOENT"));
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("my-agent", { type: "agent" });
+            expect(result.toolPresence.length).toBe(9);
+            expect(result.toolPresence.every(tp => tp.presentInConfig === false)).toBe(true);
+        });
+        it("handles item not in manifest with type override", async () => {
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({});
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockRejectedValue(new Error("ENOENT"));
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("unknown-cmd", { tool: "cursor", type: "command" });
+            expect(result.found).toBe(false);
+            expect(result.type).toBe("command");
+            expect(result.toolPresence).toHaveLength(1);
+        });
+        it("verifies MCP presence in JSONC format (VS Code)", async () => {
+            const vscodeConfig = `{
+        // VS Code MCP config
+        "servers": {
+          "postgres-mcp": { "command": "npx", "args": ["postgres-mcp"] }
+        }
+      }`;
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ mcps: { "postgres-mcp": { state: "enabled" } } });
+                }
+                if (path.includes("mcp.json")) {
+                    return vscodeConfig;
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockResolvedValue(undefined);
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("postgres-mcp", { tool: "vscode", type: "mcp" });
+            expect(result.toolPresence[0].presentInConfig).toBe(true);
+            expect(result.drifted).toHaveLength(0);
+        });
+        it("verifies MCP presence in TOML format (Codex)", async () => {
+            const codexConfig = `
+[mcpServers.my-mcp]
+command = "npx"
+args = ["my-mcp"]
+`;
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ mcps: { "my-mcp": { state: "enabled" } } });
+                }
+                if (path.includes("config.toml")) {
+                    return codexConfig;
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockResolvedValue(undefined);
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("my-mcp", { tool: "codex", type: "mcp" });
+            expect(result.toolPresence[0].presentInConfig).toBe(true);
+        });
+        it("handles missing config file gracefully", async () => {
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("manifest.yaml")) {
+                    return makeManifest({ mcps: { "test-mcp": { state: "enabled" } } });
+                }
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockResolvedValue(undefined);
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("test-mcp", { tool: "claude-code", type: "mcp" });
+            expect(result.toolPresence[0].presentInConfig).toBe(false);
+            expect(result.toolPresence[0].details).toBe("config file not found");
+        });
+        it("verifies all 6 item types dispatch correctly", async () => {
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                if (String(p).includes("manifest.yaml"))
+                    return makeManifest({});
+                throw new Error("ENOENT");
+            });
+            vi.mocked(fs.access).mockRejectedValue(new Error("ENOENT"));
+            const { verifyItemState } = await import("./state-verifier.js");
+            for (const type of ["skill", "mcp", "hook", "memory", "agent", "command"]) {
+                const result = await verifyItemState("test-item", { tool: "claude-code", type });
+                expect(result.type).toBe(type);
+                expect(result.toolPresence).toHaveLength(1);
+            }
+        });
+        it("detects skill present as symlink in tool dir", async () => {
+            vi.mocked(fs.readFile).mockImplementation(async (p) => {
+                if (String(p).includes("manifest.yaml")) {
+                    return makeManifest({ skills: { "my-skill": { state: "enabled" } } });
+                }
+                throw new Error("ENOENT");
+            });
+            // fs.access succeeds for the skill path (symlink exists)
+            vi.mocked(fs.access).mockImplementation(async (p) => {
+                const path = String(p);
+                if (path.includes("skills/my-skill"))
+                    return undefined;
+                if (path.includes(".mycelium"))
+                    return undefined; // manifest dir exists
+                throw new Error("ENOENT");
+            });
+            const { verifyItemState } = await import("./state-verifier.js");
+            const result = await verifyItemState("my-skill", { tool: "claude-code" });
+            expect(result.toolPresence[0].presentInConfig).toBe(true);
+        });
+    });
+});
+//# sourceMappingURL=state-verifier.test.js.map

package/dist/core/state-verifier.test.js.map

@@ -0,0 +1 @@
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package/dist/core/symlink-manager.d.ts

@@ -35,7 +35,7 @@ export interface Skill {
     path: string;
     manifest: {
         name: string;
-        enabled?: boolean;
+        state?: "enabled" | "disabled" | "deleted";
     };
 }
 export interface SyncOptions {

package/dist/core/symlink-manager.d.ts.map

@@ -1 +1 @@
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package/dist/core/symlink-manager.js

@@ -161,7 +161,7 @@ export async function syncSkillsToTool(skills, toolSkillsDir, options = {}) {
     // Process each skill
     for (const skill of skills) {
         const symlinkPath = path.join(toolSkillsDir, skill.name);
-        const isEnabled = skill.manifest.enabled !== false;
+        const isEnabled = !skill.manifest.state || skill.manifest.state === "enabled";
         if (isEnabled) {
             // Create or update symlink
             const createResult = await createSkillSymlink(skill.path, symlinkPath);

package/dist/core/symlink-manager.js.map

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package/dist/core/symlink-manager.test.js

@@ -263,8 +263,8 @@ describe("symlink-manager", () => {
             await fs.mkdir(skill1Path, { recursive: true });
             await fs.mkdir(skill2Path, { recursive: true });
             const skills = [
-                { name: "skill1", path: skill1Path, manifest: { name: "skill1", enabled: true } },
-                { name: "skill2", path: skill2Path, manifest: { name: "skill2", enabled: true } },
+                { name: "skill1", path: skill1Path, manifest: { name: "skill1", state: "enabled" } },
+                { name: "skill2", path: skill2Path, manifest: { name: "skill2", state: "enabled" } },
             ];
             const result = await syncSkillsToTool(skills, toolSkillsDir);
             expect(result.success).toBe(true);
@@ -290,7 +290,7 @@ describe("symlink-manager", () => {
             await fs.symlink(skillPath, symlinkPath);
             // Sync with disabled skill
             const skills = [
-                { name: "my-skill", path: skillPath, manifest: { name: "my-skill", enabled: false } },
+                { name: "my-skill", path: skillPath, manifest: { name: "my-skill", state: "disabled" } },
             ];
             const result = await syncSkillsToTool(skills, toolSkillsDir);
             expect(result.success).toBe(true);
@@ -312,7 +312,7 @@ describe("symlink-manager", () => {
             await fs.symlink(oldSkillPath, symlinkPath);
             // Sync with new location
             const skills = [
-                { name: "my-skill", path: newSkillPath, manifest: { name: "my-skill", enabled: true } },
+                { name: "my-skill", path: newSkillPath, manifest: { name: "my-skill", state: "enabled" } },
             ];
             const result = await syncSkillsToTool(skills, toolSkillsDir);
             expect(result.success).toBe(true);

package/dist/core/symlink-manager.test.js.map

@@ -1 +1 @@
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package/dist/core/sync-writer.d.ts

@@ -1,4 +1,5 @@
 import type { McpServerConfig, ScannedHook } from "@mycelish/core";
+import type { TraceLogger } from "./tracer.js";
 export interface SyncWriteResult {
     configPath: string;
     backupPath: string;
@@ -11,7 +12,7 @@ export declare function restoreBackups(): Promise<{
     restored: string[];
     errors: string[];
 }>;
-export declare function syncToTool(toolId: string, mcps: Record<string, McpServerConfig>, hooks?: ScannedHook[]): Promise<SyncWriteResult>;
+export declare function syncToTool(toolId: string, mcps: Record<string, McpServerConfig>, hooks?: ScannedHook[], log?: TraceLogger): Promise<SyncWriteResult>;
 export declare function dryRunSync(toolId: string, mcps: Record<string, McpServerConfig>): Promise<{
     configPath: string;
     currentContent: string | null;

package/dist/core/sync-writer.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"sync-writer.d.ts","sourceRoot":"","sources":["../../src/core/sync-writer.ts"],"names":[],"mappings":"AAOA,OAAO,KAAK,EAAE,eAAe,EAAE,WAAW,EAAE,MAAM,gBAAgB,CAAC;AACnE,OAAO,KAAK,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAS/C,MAAM,WAAW,eAAe;IAC9B,UAAU,EAAE,MAAM,CAAC;IACnB,UAAU,EAAE,MAAM,CAAC;IACnB,eAAe,EAAE,MAAM,EAAE,CAAC;IAC1B,OAAO,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB;AAMD,wBAAsB,YAAY,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAItE;AAED,wBAAsB,cAAc,IAAI,OAAO,CAAC;IAAE,QAAQ,EAAE,MAAM,EAAE,CAAC;IAAC,MAAM,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC,CAgCxF;AAOD,wBAAsB,UAAU,CAC9B,MAAM,EAAE,MAAM,EACd,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,eAAe,CAAC,EACrC,KAAK,CAAC,EAAE,WAAW,EAAE,EACrB,GAAG,CAAC,EAAE,WAAW,GAChB,OAAO,CAAC,eAAe,CAAC,CAwC1B;AAqFD,wBAAsB,UAAU,CAC9B,MAAM,EAAE,MAAM,EACd,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,eAAe,CAAC,GACpC,OAAO,CAAC;IAAE,UAAU,EAAE,MAAM,CAAC;IAAC,cAAc,EAAE,MAAM,GAAG,IAAI,CAAC;IAAC,UAAU,EAAE,MAAM,CAAA;CAAE,CAAC,CAyEpF"}