@medplum/core 0.1.6 → 0.3.0

package/dist/fhir/Specimen.d.ts

@@ -1,357 +0,0 @@
-import { Annotation } from './Annotation';
-import { CodeableConcept } from './CodeableConcept';
-import { Duration } from './Duration';
-import { Extension } from './Extension';
-import { Identifier } from './Identifier';
-import { Meta } from './Meta';
-import { Narrative } from './Narrative';
-import { Period } from './Period';
-import { Quantity } from './Quantity';
-import { Reference } from './Reference';
-import { Resource } from './Resource';
-/**
- * A sample to be used for analysis.
- */
-export interface Specimen {
-    /**
-     * This is a Specimen resource
-     */
-    readonly resourceType: 'Specimen';
-    /**
-     * The logical id of the resource, as used in the URL for the resource.
-     * Once assigned, this value never changes.
-     */
-    readonly id?: string;
-    /**
-     * The metadata about the resource. This is content that is maintained by
-     * the infrastructure. Changes to the content might not always be
-     * associated with version changes to the resource.
-     */
-    readonly meta?: Meta;
-    /**
-     * A reference to a set of rules that were followed when the resource was
-     * constructed, and which must be understood when processing the content.
-     * Often, this is a reference to an implementation guide that defines the
-     * special rules along with other profiles etc.
-     */
-    readonly implicitRules?: string;
-    /**
-     * The base language in which the resource is written.
-     */
-    readonly language?: string;
-    /**
-     * A human-readable narrative that contains a summary of the resource and
-     * can be used to represent the content of the resource to a human. The
-     * narrative need not encode all the structured data, but is required to
-     * contain sufficient detail to make it "clinically safe" for a human to
-     * just read the narrative. Resource definitions may define what content
-     * should be represented in the narrative to ensure clinical safety.
-     */
-    readonly text?: Narrative;
-    /**
-     * These resources do not have an independent existence apart from the
-     * resource that contains them - they cannot be identified independently,
-     * and nor can they have their own independent transaction scope.
-     */
-    readonly contained?: Resource[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the resource. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the resource and that modifies the
-     * understanding of the element that contains it and/or the understanding
-     * of the containing element's descendants. Usually modifier elements
-     * provide negation or qualification. To make the use of extensions safe
-     * and manageable, there is a strict set of governance applied to the
-     * definition and use of extensions. Though any implementer is allowed to
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension. Applications processing a
-     * resource are required to check for modifier extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * Id for specimen.
-     */
-    readonly identifier?: Identifier[];
-    /**
-     * The identifier assigned by the lab when accessioning specimen(s). This
-     * is not necessarily the same as the specimen identifier, depending on
-     * local lab procedures.
-     */
-    readonly accessionIdentifier?: Identifier;
-    /**
-     * The availability of the specimen.
-     */
-    readonly status?: string;
-    /**
-     * The kind of material that forms the specimen.
-     */
-    readonly type?: CodeableConcept;
-    /**
-     * Where the specimen came from. This may be from patient(s), from a
-     * location (e.g., the source of an environmental sample), or a sampling
-     * of a substance or a device.
-     */
-    readonly subject?: Reference;
-    /**
-     * Time when specimen was received for processing or testing.
-     */
-    readonly receivedTime?: Date | string;
-    /**
-     * Reference to the parent (source) specimen which is used when the
-     * specimen was either derived from or a component of another specimen.
-     */
-    readonly parent?: Reference[];
-    /**
-     * Details concerning a service request that required a specimen to be
-     * collected.
-     */
-    readonly request?: Reference[];
-    /**
-     * Details concerning the specimen collection.
-     */
-    readonly collection?: SpecimenCollection;
-    /**
-     * Details concerning processing and processing steps for the specimen.
-     */
-    readonly processing?: SpecimenProcessing[];
-    /**
-     * The container holding the specimen.  The recursive nature of
-     * containers; i.e. blood in tube in tray in rack is not addressed here.
-     */
-    readonly container?: SpecimenContainer[];
-    /**
-     * A mode or state of being that describes the nature of the specimen.
-     */
-    readonly condition?: CodeableConcept[];
-    /**
-     * To communicate any details or issues about the specimen or during the
-     * specimen collection. (for example: broken vial, sent with patient,
-     * frozen).
-     */
-    readonly note?: Annotation[];
-}
-/**
- * A sample to be used for analysis.
- */
-export interface SpecimenCollection {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * Person who collected the specimen.
-     */
-    readonly collector?: Reference;
-    /**
-     * Time when specimen was collected from subject - the physiologically
-     * relevant time.
-     */
-    readonly collectedDateTime?: string;
-    /**
-     * Time when specimen was collected from subject - the physiologically
-     * relevant time.
-     */
-    readonly collectedPeriod?: Period;
-    /**
-     * The span of time over which the collection of a specimen occurred.
-     */
-    readonly duration?: Duration;
-    /**
-     * The quantity of specimen collected; for instance the volume of a blood
-     * sample, or the physical measurement of an anatomic pathology sample.
-     */
-    readonly quantity?: Quantity;
-    /**
-     * A coded value specifying the technique that is used to perform the
-     * procedure.
-     */
-    readonly method?: CodeableConcept;
-    /**
-     * Anatomical location from which the specimen was collected (if subject
-     * is a patient). This is the target site.  This element is not used for
-     * environmental specimens.
-     */
-    readonly bodySite?: CodeableConcept;
-    /**
-     * Abstinence or reduction from some or all food, drink, or both, for a
-     * period of time prior to sample collection.
-     */
-    readonly fastingStatusCodeableConcept?: CodeableConcept;
-    /**
-     * Abstinence or reduction from some or all food, drink, or both, for a
-     * period of time prior to sample collection.
-     */
-    readonly fastingStatusDuration?: Duration;
-}
-/**
- * A sample to be used for analysis.
- */
-export interface SpecimenContainer {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * Id for container. There may be multiple; a manufacturer's bar code,
-     * lab assigned identifier, etc. The container ID may differ from the
-     * specimen id in some circumstances.
-     */
-    readonly identifier?: Identifier[];
-    /**
-     * Textual description of the container.
-     */
-    readonly description?: string;
-    /**
-     * The type of container associated with the specimen (e.g. slide,
-     * aliquot, etc.).
-     */
-    readonly type?: CodeableConcept;
-    /**
-     * The capacity (volume or other measure) the container may contain.
-     */
-    readonly capacity?: Quantity;
-    /**
-     * The quantity of specimen in the container; may be volume, dimensions,
-     * or other appropriate measurements, depending on the specimen type.
-     */
-    readonly specimenQuantity?: Quantity;
-    /**
-     * Introduced substance to preserve, maintain or enhance the specimen.
-     * Examples: Formalin, Citrate, EDTA.
-     */
-    readonly additiveCodeableConcept?: CodeableConcept;
-    /**
-     * Introduced substance to preserve, maintain or enhance the specimen.
-     * Examples: Formalin, Citrate, EDTA.
-     */
-    readonly additiveReference?: Reference;
-}
-/**
- * A sample to be used for analysis.
- */
-export interface SpecimenProcessing {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * Textual description of procedure.
-     */
-    readonly description?: string;
-    /**
-     * A coded value specifying the procedure used to process the specimen.
-     */
-    readonly procedure?: CodeableConcept;
-    /**
-     * Material used in the processing step.
-     */
-    readonly additive?: Reference[];
-    /**
-     * A record of the time or period when the specimen processing occurred.
-     * For example the time of sample fixation or the period of time the
-     * sample was in formalin.
-     */
-    readonly timeDateTime?: string;
-    /**
-     * A record of the time or period when the specimen processing occurred.
-     * For example the time of sample fixation or the period of time the
-     * sample was in formalin.
-     */
-    readonly timePeriod?: Period;
-}

package/dist/fhir/Specimen.js

@@ -1,7 +0,0 @@
-"use strict";
-/*
- * Generated by @medplum/generator
- * Do not edit manually.
- */
-Object.defineProperty(exports, "__esModule", { value: true });
-//# sourceMappingURL=Specimen.js.map

package/dist/fhir/Specimen.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"Specimen.js","sourceRoot":"","sources":["../../src/fhir/Specimen.ts"],"names":[],"mappings":";AAAA;;;GAGG"}