@jbrowse/plugin-linear-genome-view 4.3.0 → 5.0.0-beta.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/esm/FeatureTrack/configSchema.d.ts +104 -65
- package/esm/FeatureTrack/configSchema.js +47 -1
- package/esm/FeatureTrack/index.js +1 -1
- package/esm/LaunchLinearGenomeView/index.d.ts +14 -0
- package/esm/LaunchLinearGenomeView/index.js +6 -12
- package/esm/LinearGenomeView/afterAttach.d.ts +20 -2
- package/esm/LinearGenomeView/afterAttach.js +250 -121
- package/esm/LinearGenomeView/components/CenterLine.d.ts +1 -1
- package/esm/LinearGenomeView/components/CenterLine.js +16 -7
- package/esm/LinearGenomeView/components/ConnectedHoverHighlight.d.ts +7 -0
- package/esm/LinearGenomeView/components/ConnectedHoverHighlight.js +22 -0
- package/esm/LinearGenomeView/components/CrisprGuidePanel.d.ts +3 -0
- package/esm/LinearGenomeView/components/CrisprGuidePanel.js +144 -0
- package/esm/LinearGenomeView/components/Cytobands.d.ts +6 -6
- package/esm/LinearGenomeView/components/Cytobands.js +76 -53
- package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +7 -3
- package/esm/LinearGenomeView/components/ExportSvgDialog.js +11 -67
- package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +5 -9
- package/esm/LinearGenomeView/components/GetSequenceDialog.js +84 -88
- package/esm/LinearGenomeView/components/Gridlines.d.ts +1 -1
- package/esm/LinearGenomeView/components/Gridlines.js +29 -58
- package/esm/LinearGenomeView/components/Header.d.ts +1 -1
- package/esm/LinearGenomeView/components/Header.js +32 -16
- package/esm/LinearGenomeView/components/HeaderClearHighlightButton.d.ts +21 -0
- package/esm/LinearGenomeView/components/HeaderClearHighlightButton.js +35 -0
- package/esm/LinearGenomeView/components/HeaderPanControls.d.ts +3 -2
- package/esm/LinearGenomeView/components/HeaderPanControls.js +16 -7
- package/esm/LinearGenomeView/components/HeaderRegionWidth.d.ts +1 -1
- package/esm/LinearGenomeView/components/HeaderRegionWidth.js +9 -6
- package/esm/LinearGenomeView/components/HeaderSearchBoxRow.d.ts +6 -0
- package/esm/LinearGenomeView/components/HeaderSearchBoxRow.js +27 -0
- package/esm/LinearGenomeView/components/HeaderSearchBoxes.d.ts +5 -0
- package/esm/LinearGenomeView/components/HeaderSearchBoxes.js +28 -0
- package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.d.ts +3 -2
- package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.js +11 -4
- package/esm/LinearGenomeView/components/HeaderZoomControls.d.ts +3 -2
- package/esm/LinearGenomeView/components/HeaderZoomControls.js +67 -51
- package/esm/LinearGenomeView/components/Highlight.d.ts +1 -1
- package/esm/LinearGenomeView/components/Highlight.js +19 -23
- package/esm/LinearGenomeView/components/HighlightBand.d.ts +3 -2
- package/esm/LinearGenomeView/components/HighlightBand.js +25 -8
- package/esm/LinearGenomeView/components/HighlightChip.d.ts +9 -0
- package/esm/LinearGenomeView/components/HighlightChip.js +15 -0
- package/esm/LinearGenomeView/components/HoverPositionHighlight.d.ts +12 -0
- package/esm/LinearGenomeView/components/HoverPositionHighlight.js +25 -0
- package/esm/LinearGenomeView/components/ImportForm.d.ts +3 -4
- package/esm/LinearGenomeView/components/ImportForm.js +95 -61
- package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +1 -1
- package/esm/LinearGenomeView/components/LinearGenomeView.js +6 -5
- package/esm/LinearGenomeView/components/LinearGenomeViewContainer.d.ts +1 -1
- package/esm/LinearGenomeView/components/LinearGenomeViewContainer.js +89 -30
- package/esm/LinearGenomeView/components/MiniControls.d.ts +1 -1
- package/esm/LinearGenomeView/components/MiniControls.js +13 -10
- package/esm/LinearGenomeView/components/MotifListPanel.d.ts +3 -0
- package/esm/LinearGenomeView/components/MotifListPanel.js +59 -0
- package/esm/LinearGenomeView/components/NavigationAnnouncer.d.ts +32 -0
- package/esm/LinearGenomeView/components/NavigationAnnouncer.js +51 -0
- package/esm/LinearGenomeView/components/NoTracksActiveButton.d.ts +1 -1
- package/esm/LinearGenomeView/components/NoTracksActiveButton.js +1 -1
- package/esm/LinearGenomeView/components/OverviewHighlight.d.ts +2 -4
- package/esm/LinearGenomeView/components/OverviewHighlight.js +23 -44
- package/esm/LinearGenomeView/components/OverviewHighlightBand.d.ts +9 -0
- package/esm/LinearGenomeView/components/OverviewHighlightBand.js +26 -0
- package/esm/LinearGenomeView/components/OverviewRubberband.d.ts +3 -3
- package/esm/LinearGenomeView/components/OverviewRubberband.js +44 -57
- package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.d.ts +4 -5
- package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +13 -20
- package/esm/LinearGenomeView/components/OverviewScalebar.d.ts +3 -2
- package/esm/LinearGenomeView/components/OverviewScalebar.js +84 -79
- package/esm/LinearGenomeView/components/OverviewScalebarPolygon.d.ts +19 -5
- package/esm/LinearGenomeView/components/OverviewScalebarPolygon.js +55 -32
- package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.d.ts +4 -5
- package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.js +16 -18
- package/esm/LinearGenomeView/components/PaddingBlocks.d.ts +7 -0
- package/esm/LinearGenomeView/components/PaddingBlocks.js +61 -0
- package/esm/LinearGenomeView/components/RangeSelectOverlay.d.ts +9 -0
- package/esm/LinearGenomeView/components/RangeSelectOverlay.js +20 -0
- package/esm/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +2 -3
- package/esm/LinearGenomeView/components/RegionWidthEditorDialog.js +19 -26
- package/esm/LinearGenomeView/components/Rubberband.d.ts +1 -1
- package/esm/LinearGenomeView/components/Rubberband.js +13 -16
- package/esm/LinearGenomeView/components/SVGHighlightBand.d.ts +10 -0
- package/esm/LinearGenomeView/components/SVGHighlightBand.js +9 -0
- package/esm/LinearGenomeView/components/Scalebar.d.ts +2 -2
- package/esm/LinearGenomeView/components/Scalebar.js +16 -21
- package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +1 -1
- package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.js +54 -35
- package/esm/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +1 -1
- package/esm/LinearGenomeView/components/ScalebarRefNameLabels.js +142 -126
- package/esm/LinearGenomeView/components/SearchBox.d.ts +22 -2
- package/esm/LinearGenomeView/components/SearchBox.js +58 -66
- package/esm/LinearGenomeView/components/SearchPanelForm.d.ts +9 -0
- package/esm/LinearGenomeView/components/SearchPanelForm.js +18 -0
- package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +3 -3
- package/esm/LinearGenomeView/components/SearchResultsDialog.js +5 -7
- package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +4 -3
- package/esm/LinearGenomeView/components/SearchResultsTable.js +45 -53
- package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.d.ts +5 -0
- package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.js +37 -0
- package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.d.ts +2 -0
- package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.js +5 -0
- package/esm/LinearGenomeView/components/SequencePatternPanel.d.ts +3 -0
- package/esm/LinearGenomeView/components/SequencePatternPanel.js +42 -0
- package/esm/LinearGenomeView/components/SequenceSearchDialog.d.ts +2 -2
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js +31 -53
- package/esm/LinearGenomeView/components/StrandCheckboxes.d.ts +8 -0
- package/esm/LinearGenomeView/components/StrandCheckboxes.js +13 -0
- package/esm/LinearGenomeView/components/TrackContainer.d.ts +1 -1
- package/esm/LinearGenomeView/components/TrackContainer.js +83 -39
- package/esm/LinearGenomeView/components/TrackLabel.d.ts +2 -3
- package/esm/LinearGenomeView/components/TrackLabel.js +11 -24
- package/esm/LinearGenomeView/components/TrackLabelButtons.d.ts +7 -0
- package/esm/LinearGenomeView/components/TrackLabelButtons.js +33 -0
- package/esm/LinearGenomeView/components/TrackLabelDragHandle.d.ts +2 -5
- package/esm/LinearGenomeView/components/TrackLabelDragHandle.js +6 -2
- package/esm/LinearGenomeView/components/TrackLabelMenu.d.ts +1 -1
- package/esm/LinearGenomeView/components/TrackLabelMenu.js +32 -85
- package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.d.ts +22 -0
- package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.js +46 -0
- package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +1 -1
- package/esm/LinearGenomeView/components/TrackRenderingContainer.js +72 -18
- package/esm/LinearGenomeView/components/TracksContainer.d.ts +1 -1
- package/esm/LinearGenomeView/components/TracksContainer.js +65 -32
- package/esm/LinearGenomeView/components/VerticalGuide.d.ts +1 -1
- package/esm/LinearGenomeView/components/VerticalGuide.js +6 -13
- package/esm/LinearGenomeView/components/ZoomButton.d.ts +7 -0
- package/esm/LinearGenomeView/components/ZoomButton.js +27 -0
- package/esm/LinearGenomeView/components/ZoomTransform.d.ts +9 -0
- package/esm/LinearGenomeView/components/ZoomTransform.js +37 -0
- package/esm/LinearGenomeView/components/defaultMotifs.d.ts +1 -0
- package/esm/LinearGenomeView/components/defaultMotifs.js +22 -0
- package/esm/LinearGenomeView/components/fetchSequence.d.ts +7 -8
- package/esm/LinearGenomeView/components/fetchSequence.js +17 -9
- package/esm/LinearGenomeView/components/recentLocationsMenu.d.ts +15 -0
- package/esm/LinearGenomeView/components/recentLocationsMenu.js +36 -0
- package/esm/LinearGenomeView/components/searchModes.d.ts +13 -0
- package/esm/LinearGenomeView/components/searchModes.js +22 -0
- package/esm/LinearGenomeView/components/trackLabelMenuItems.d.ts +7 -0
- package/esm/LinearGenomeView/components/trackLabelMenuItems.js +67 -0
- package/esm/LinearGenomeView/components/useRangeSelect.d.ts +11 -66
- package/esm/LinearGenomeView/components/useRangeSelect.js +82 -91
- package/esm/LinearGenomeView/components/useSearchBoxPrefs.d.ts +26 -0
- package/esm/LinearGenomeView/components/useSearchBoxPrefs.js +58 -0
- package/esm/LinearGenomeView/components/useSideScroll.d.ts +1 -1
- package/esm/LinearGenomeView/components/useSideScroll.js +87 -19
- package/esm/LinearGenomeView/components/util.d.ts +20 -6
- package/esm/LinearGenomeView/components/util.js +27 -6
- package/esm/LinearGenomeView/consts.d.ts +7 -2
- package/esm/LinearGenomeView/consts.js +18 -2
- package/esm/LinearGenomeView/flyTo.d.ts +38 -0
- package/esm/LinearGenomeView/flyTo.js +135 -0
- package/esm/LinearGenomeView/headerFit.d.ts +27 -0
- package/esm/LinearGenomeView/headerFit.js +59 -0
- package/esm/LinearGenomeView/index.d.ts +32 -2
- package/esm/LinearGenomeView/index.js +16 -6
- package/esm/LinearGenomeView/initKeys.d.ts +12 -0
- package/esm/LinearGenomeView/initKeys.js +68 -0
- package/esm/LinearGenomeView/keyboardHandler.d.ts +7 -0
- package/esm/LinearGenomeView/keyboardHandler.js +10 -0
- package/esm/LinearGenomeView/launchKeys.d.ts +2 -0
- package/esm/LinearGenomeView/launchKeys.js +23 -0
- package/esm/LinearGenomeView/lazyDialogs.d.ts +7 -11
- package/esm/LinearGenomeView/lazyDialogs.js +3 -3
- package/esm/LinearGenomeView/linkedViewSync.d.ts +20 -0
- package/esm/LinearGenomeView/linkedViewSync.js +58 -0
- package/esm/LinearGenomeView/menuItems.d.ts +27 -2
- package/esm/LinearGenomeView/menuItems.js +137 -101
- package/esm/LinearGenomeView/model.d.ts +3238 -136
- package/esm/LinearGenomeView/model.js +2425 -528
- package/esm/LinearGenomeView/sharedScaleContainer.d.ts +18 -0
- package/esm/LinearGenomeView/sharedScaleContainer.js +17 -0
- package/esm/LinearGenomeView/showRegionsWithUndo.d.ts +35 -0
- package/esm/LinearGenomeView/showRegionsWithUndo.js +44 -0
- package/esm/LinearGenomeView/stickyChrome.d.ts +19 -0
- package/esm/LinearGenomeView/stickyChrome.js +30 -0
- package/esm/LinearGenomeView/svgcomponents/SVGGridlines.d.ts +1 -1
- package/esm/LinearGenomeView/svgcomponents/SVGGridlines.js +15 -16
- package/esm/LinearGenomeView/svgcomponents/SVGHeader.d.ts +2 -3
- package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +45 -33
- package/esm/LinearGenomeView/svgcomponents/SVGHighlights.d.ts +5 -0
- package/esm/LinearGenomeView/svgcomponents/SVGHighlights.js +26 -0
- package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.d.ts +5 -0
- package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.js +13 -0
- package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +1 -3
- package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +77 -41
- package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts +1 -1
- package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +23 -3
- package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.d.ts +8 -0
- package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.js +37 -0
- package/esm/LinearGenomeView/svgcomponents/SVGRuler.d.ts +3 -3
- package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +64 -36
- package/esm/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +1 -1
- package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js +7 -5
- package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +5 -3
- package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js +43 -7
- package/esm/LinearGenomeView/svgcomponents/SVGTracks.d.ts +8 -14
- package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +16 -21
- package/esm/LinearGenomeView/svgcomponents/SVGView.d.ts +18 -0
- package/esm/LinearGenomeView/svgcomponents/SVGView.js +13 -0
- package/esm/LinearGenomeView/svgcomponents/figureContract.d.ts +45 -0
- package/esm/LinearGenomeView/svgcomponents/figureContract.js +130 -0
- package/esm/LinearGenomeView/svgcomponents/renderViewTracks.d.ts +76 -0
- package/esm/LinearGenomeView/svgcomponents/renderViewTracks.js +66 -0
- package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.d.ts +70 -0
- package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.js +263 -0
- package/esm/LinearGenomeView/svgcomponents/util.d.ts +92 -5
- package/esm/LinearGenomeView/svgcomponents/util.js +236 -3
- package/esm/LinearGenomeView/types.d.ts +17 -31
- package/esm/LinearGenomeView/types.js +1 -0
- package/esm/LinearGenomeView/util.d.ts +332 -12
- package/esm/LinearGenomeView/util.js +606 -62
- package/esm/MultiLevelRubberband/MultiLevelRubberband.d.ts +6 -0
- package/esm/MultiLevelRubberband/MultiLevelRubberband.js +37 -0
- package/esm/MultiLevelRubberband/VerticalGuide.d.ts +6 -0
- package/esm/MultiLevelRubberband/VerticalGuide.js +21 -0
- package/esm/MultiLevelRubberband/index.d.ts +2 -0
- package/esm/MultiLevelRubberband/index.js +1 -0
- package/esm/MultiLevelRubberband/types.d.ts +6 -0
- package/esm/MultiLevelRubberband/useRangeSelect.d.ts +24 -0
- package/esm/MultiLevelRubberband/useRangeSelect.js +136 -0
- package/esm/displayKitTests/perRegionTestEnv.d.ts +1286 -0
- package/esm/displayKitTests/perRegionTestEnv.js +138 -0
- package/esm/index.d.ts +122 -1235
- package/esm/index.js +101 -24
- package/esm/lazyPluginExports.d.ts +23 -0
- package/esm/lazyPluginExports.js +36 -0
- package/esm/searchUtils.d.ts +55 -11
- package/esm/searchUtils.js +342 -45
- package/esm/shared/RubberbandSpan.d.ts +15 -0
- package/esm/shared/RubberbandSpan.js +33 -0
- package/esm/shared/coordLabels.d.ts +40 -0
- package/esm/shared/coordLabels.js +119 -0
- package/package.json +18 -19
- package/esm/BaseLinearDisplay/SVGLegend.d.ts +0 -6
- package/esm/BaseLinearDisplay/SVGLegend.js +0 -17
- package/esm/BaseLinearDisplay/calculateSvgLegendWidth.d.ts +0 -2
- package/esm/BaseLinearDisplay/calculateSvgLegendWidth.js +0 -11
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +0 -8
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -53
- package/esm/BaseLinearDisplay/components/Block.d.ts +0 -14
- package/esm/BaseLinearDisplay/components/Block.js +0 -45
- package/esm/BaseLinearDisplay/components/BlockErrorMessage.d.ts +0 -7
- package/esm/BaseLinearDisplay/components/BlockErrorMessage.js +0 -22
- package/esm/BaseLinearDisplay/components/BlockMsg.d.ts +0 -6
- package/esm/BaseLinearDisplay/components/BlockMsg.js +0 -26
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.d.ts +0 -9
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.js +0 -42
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.d.ts +0 -11
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.js +0 -40
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.d.ts +0 -19
- package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.js +0 -45
- package/esm/BaseLinearDisplay/components/FloatingLabels.d.ts +0 -5
- package/esm/BaseLinearDisplay/components/FloatingLabels.js +0 -75
- package/esm/BaseLinearDisplay/components/FloatingLegend.d.ts +0 -8
- package/esm/BaseLinearDisplay/components/FloatingLegend.js +0 -43
- package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +0 -5
- package/esm/BaseLinearDisplay/components/LinearBlocks.js +0 -23
- package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +0 -5
- package/esm/BaseLinearDisplay/components/LoadingOverlay.js +0 -49
- package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.d.ts +0 -4
- package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.js +0 -26
- package/esm/BaseLinearDisplay/components/MenuPage.d.ts +0 -8
- package/esm/BaseLinearDisplay/components/MenuPage.js +0 -24
- package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +0 -21
- package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +0 -52
- package/esm/BaseLinearDisplay/components/RenderedBlocks.d.ts +0 -12
- package/esm/BaseLinearDisplay/components/RenderedBlocks.js +0 -22
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +0 -12
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -18
- package/esm/BaseLinearDisplay/components/TooLargeMessage.d.ts +0 -10
- package/esm/BaseLinearDisplay/components/TooLargeMessage.js +0 -20
- package/esm/BaseLinearDisplay/components/Tooltip.d.ts +0 -13
- package/esm/BaseLinearDisplay/components/Tooltip.js +0 -22
- package/esm/BaseLinearDisplay/components/types.d.ts +0 -1
- package/esm/BaseLinearDisplay/components/util.d.ts +0 -21
- package/esm/BaseLinearDisplay/components/util.js +0 -107
- package/esm/BaseLinearDisplay/index.d.ts +0 -17
- package/esm/BaseLinearDisplay/index.js +0 -13
- package/esm/BaseLinearDisplay/model.d.ts +0 -1197
- package/esm/BaseLinearDisplay/model.js +0 -432
- package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +0 -32
- package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -113
- package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.d.ts +0 -26
- package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.js +0 -57
- package/esm/BaseLinearDisplay/models/SvgFloatingLabels.d.ts +0 -8
- package/esm/BaseLinearDisplay/models/SvgFloatingLabels.js +0 -19
- package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +0 -11
- package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +0 -31
- package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +0 -2
- package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -29
- package/esm/BaseLinearDisplay/models/configSchema.d.ts +0 -29
- package/esm/BaseLinearDisplay/models/configSchema.js +0 -33
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +0 -98
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -242
- package/esm/BaseLinearDisplay/models/util.d.ts +0 -9
- package/esm/BaseLinearDisplay/models/util.js +0 -43
- package/esm/BaseLinearDisplay/renderSvg.d.ts +0 -3
- package/esm/BaseLinearDisplay/renderSvg.js +0 -63
- package/esm/BaseLinearDisplay/types.d.ts +0 -43
- package/esm/BaseLinearDisplay/types.js +0 -3
- package/esm/BaseLinearDisplay/util.d.ts +0 -16
- package/esm/BaseLinearDisplay/util.js +0 -71
- package/esm/BasicTrack/configSchema.d.ts +0 -85
- package/esm/BasicTrack/configSchema.js +0 -8
- package/esm/BasicTrack/index.d.ts +0 -2
- package/esm/BasicTrack/index.js +0 -12
- package/esm/LinearBareDisplay/configSchema.d.ts +0 -32
- package/esm/LinearBareDisplay/configSchema.js +0 -11
- package/esm/LinearBareDisplay/index.d.ts +0 -4
- package/esm/LinearBareDisplay/index.js +0 -20
- package/esm/LinearBareDisplay/model.d.ts +0 -1196
- package/esm/LinearBareDisplay/model.js +0 -32
- package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.d.ts +0 -5
- package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.js +0 -9
- package/esm/LinearBasicDisplay/configSchema.d.ts +0 -32
- package/esm/LinearBasicDisplay/configSchema.js +0 -11
- package/esm/LinearBasicDisplay/index.d.ts +0 -4
- package/esm/LinearBasicDisplay/index.js +0 -20
- package/esm/LinearBasicDisplay/model.d.ts +0 -1391
- package/esm/LinearBasicDisplay/model.js +0 -158
- package/esm/LinearFeatureDisplay/components/AddFiltersDialog.d.ts +0 -9
- package/esm/LinearFeatureDisplay/components/AddFiltersDialog.js +0 -58
- package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.d.ts +0 -8
- package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.js +0 -26
- package/esm/LinearFeatureDisplay/configSchema.d.ts +0 -32
- package/esm/LinearFeatureDisplay/configSchema.js +0 -11
- package/esm/LinearFeatureDisplay/index.d.ts +0 -3
- package/esm/LinearFeatureDisplay/index.js +0 -2
- package/esm/LinearFeatureDisplay/model.d.ts +0 -1443
- package/esm/LinearFeatureDisplay/model.js +0 -305
- package/esm/LinearGenomeView/SVGErrorBox.d.ts +0 -5
- package/esm/LinearGenomeView/SVGErrorBox.js +0 -4
- package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.d.ts +0 -11
- package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +0 -27
- package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +0 -5
- package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -13
- package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +0 -3
- package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -17
- package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.d.ts +0 -3
- package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -8
- package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +0 -16
- package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -101
- package/esm/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +0 -10
- package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -45
- package/esm/LinearGenomeView/components/RubberbandSpan.d.ts +0 -15
- package/esm/LinearGenomeView/components/RubberbandSpan.js +0 -32
- package/esm/LinearGenomeView/components/RubberbandTooltip.d.ts +0 -5
- package/esm/LinearGenomeView/components/RubberbandTooltip.js +0 -17
- package/esm/LinearGenomeView/components/TrackLabelContainer.d.ts +0 -8
- package/esm/LinearGenomeView/components/TrackLabelContainer.js +0 -25
- package/esm/LinearGenomeView/components/useWheelScroll.d.ts +0 -7
- package/esm/LinearGenomeView/components/useWheelScroll.js +0 -69
- package/esm/LinearGenomeView/svgExportUtil.d.ts +0 -9
- package/esm/LinearGenomeView/svgExportUtil.js +0 -6
- package/esm/LinearGenomeView/svgcomponents/SVGBackground.d.ts +0 -5
- package/esm/LinearGenomeView/svgcomponents/SVGBackground.js +0 -7
- /package/esm/{BaseLinearDisplay/components → MultiLevelRubberband}/types.js +0 -0
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import { jsx as _jsx } from "react/jsx-runtime";
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import { Tooltip } from '@mui/material';
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export default function RubberbandTooltip({ anchorEl, side, text, }) {
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return (_jsx(Tooltip, { title: text, open: true, placement: side === 'left' ? 'left-start' : 'right-start', slotProps: {
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popper: {
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anchorEl,
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modifiers: [
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{
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name: 'offset',
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options: {
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offset: [-30, -10],
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},
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},
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],
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},
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}, children: _jsx("span", {}) }));
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}
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import type { LinearGenomeViewModel } from '../index.ts';
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import type { BaseTrackModel } from '@jbrowse/core/pluggableElementTypes/models';
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type LGV = LinearGenomeViewModel;
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declare const TrackLabelContainer: ({ track, view, }: {
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track: BaseTrackModel;
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view: LGV;
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}) => import("react/jsx-runtime").JSX.Element | null;
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export default TrackLabelContainer;
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import { jsx as _jsx } from "react/jsx-runtime";
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import { cx, makeStyles } from '@jbrowse/core/util/tss-react';
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import { observer } from 'mobx-react';
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import TrackLabel from "./TrackLabel.js";
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const useStyles = makeStyles()({
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trackLabel: {
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zIndex: 2,
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},
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trackLabelOffset: {
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position: 'relative',
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display: 'inline-block',
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},
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trackLabelOverlap: {
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position: 'absolute',
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},
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});
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const TrackLabelContainer = observer(function TrackLabelContainer({ track, view, }) {
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const { classes } = useStyles();
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const display = track.displays[0];
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const labelStyle = view.trackLabelsSetting !== 'overlapping' || display.prefersOffset
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? classes.trackLabelOffset
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: classes.trackLabelOverlap;
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return view.trackLabelsSetting !== 'hidden' ? (_jsx(TrackLabel, { track: track, className: cx(classes.trackLabel, labelStyle) })) : null;
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});
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export default TrackLabelContainer;
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import type React from 'react';
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export declare function useWheelScroll(ref: React.RefObject<HTMLDivElement | null>, model: {
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bpPerPx: number;
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zoomTo: (arg: number, arg2?: number) => void;
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setScaleFactor: (arg: number) => void;
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horizontalScroll: (arg: number) => void;
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}): void;
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import { useEffect, useRef } from 'react';
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import { sum } from '@jbrowse/core/util';
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export function useWheelScroll(ref, model) {
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const zoomDelta = useRef(0);
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const scrollDelta = useRef(0);
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const timeout = useRef(null);
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const rafId = useRef(0);
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const scheduled = useRef(false);
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useEffect(() => {
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let samples = [];
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const curr = ref.current;
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function onWheel(event) {
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if (event.ctrlKey) {
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event.preventDefault();
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samples.push(event.deltaY);
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const averageDeltaY = Math.abs(sum(samples)) / samples.length;
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const normalizer = averageDeltaY < 6
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? 25
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: averageDeltaY > 30
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? averageDeltaY > 150
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? 500
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: 150
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: 75;
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zoomDelta.current += event.deltaY / normalizer;
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model.setScaleFactor(zoomDelta.current < 0
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? 1 - zoomDelta.current
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: 1 / (1 + zoomDelta.current));
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if (timeout.current) {
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clearTimeout(timeout.current);
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}
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timeout.current = setTimeout(() => {
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model.setScaleFactor(1);
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model.zoomTo(zoomDelta.current > 0
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? model.bpPerPx * (1 + zoomDelta.current)
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: model.bpPerPx / (1 - zoomDelta.current), event.clientX - (curr?.getBoundingClientRect().left || 0));
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zoomDelta.current = 0;
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samples = [];
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}, 300);
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}
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else {
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if (Math.abs(event.deltaX) > Math.abs(2 * event.deltaY)) {
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event.preventDefault();
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}
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scrollDelta.current += event.deltaX;
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if (!scheduled.current) {
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scheduled.current = true;
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rafId.current = window.requestAnimationFrame(() => {
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model.horizontalScroll(scrollDelta.current);
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scrollDelta.current = 0;
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scheduled.current = false;
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});
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}
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}
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}
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if (curr) {
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curr.addEventListener('wheel', onWheel, { passive: false });
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return () => {
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curr.removeEventListener('wheel', onWheel);
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if (timeout.current) {
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clearTimeout(timeout.current);
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}
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if (rafId.current) {
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cancelAnimationFrame(rafId.current);
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}
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};
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}
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return () => { };
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}, [model, ref]);
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}
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import { jsx as _jsx } from "react/jsx-runtime";
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import { stripAlpha } from '@jbrowse/core/util';
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import { useTheme } from '@mui/material';
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export default function SVGBackground({ width, height, shift, }) {
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const theme = useTheme();
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return (_jsx("rect", { width: width + shift * 2, height: height, fill: stripAlpha(theme.palette.background.default) }));
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}
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File without changes
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