@jbrowse/plugin-linear-genome-view 4.3.0 → 5.0.0-beta.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (357) hide show
  1. package/esm/FeatureTrack/configSchema.d.ts +104 -65
  2. package/esm/FeatureTrack/configSchema.js +47 -1
  3. package/esm/FeatureTrack/index.js +1 -1
  4. package/esm/LaunchLinearGenomeView/index.d.ts +14 -0
  5. package/esm/LaunchLinearGenomeView/index.js +6 -12
  6. package/esm/LinearGenomeView/afterAttach.d.ts +20 -2
  7. package/esm/LinearGenomeView/afterAttach.js +250 -121
  8. package/esm/LinearGenomeView/components/CenterLine.d.ts +1 -1
  9. package/esm/LinearGenomeView/components/CenterLine.js +16 -7
  10. package/esm/LinearGenomeView/components/ConnectedHoverHighlight.d.ts +7 -0
  11. package/esm/LinearGenomeView/components/ConnectedHoverHighlight.js +22 -0
  12. package/esm/LinearGenomeView/components/CrisprGuidePanel.d.ts +3 -0
  13. package/esm/LinearGenomeView/components/CrisprGuidePanel.js +144 -0
  14. package/esm/LinearGenomeView/components/Cytobands.d.ts +6 -6
  15. package/esm/LinearGenomeView/components/Cytobands.js +76 -53
  16. package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +7 -3
  17. package/esm/LinearGenomeView/components/ExportSvgDialog.js +11 -67
  18. package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +5 -9
  19. package/esm/LinearGenomeView/components/GetSequenceDialog.js +84 -88
  20. package/esm/LinearGenomeView/components/Gridlines.d.ts +1 -1
  21. package/esm/LinearGenomeView/components/Gridlines.js +29 -58
  22. package/esm/LinearGenomeView/components/Header.d.ts +1 -1
  23. package/esm/LinearGenomeView/components/Header.js +32 -16
  24. package/esm/LinearGenomeView/components/HeaderClearHighlightButton.d.ts +21 -0
  25. package/esm/LinearGenomeView/components/HeaderClearHighlightButton.js +35 -0
  26. package/esm/LinearGenomeView/components/HeaderPanControls.d.ts +3 -2
  27. package/esm/LinearGenomeView/components/HeaderPanControls.js +16 -7
  28. package/esm/LinearGenomeView/components/HeaderRegionWidth.d.ts +1 -1
  29. package/esm/LinearGenomeView/components/HeaderRegionWidth.js +9 -6
  30. package/esm/LinearGenomeView/components/HeaderSearchBoxRow.d.ts +6 -0
  31. package/esm/LinearGenomeView/components/HeaderSearchBoxRow.js +27 -0
  32. package/esm/LinearGenomeView/components/HeaderSearchBoxes.d.ts +5 -0
  33. package/esm/LinearGenomeView/components/HeaderSearchBoxes.js +28 -0
  34. package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.d.ts +3 -2
  35. package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.js +11 -4
  36. package/esm/LinearGenomeView/components/HeaderZoomControls.d.ts +3 -2
  37. package/esm/LinearGenomeView/components/HeaderZoomControls.js +67 -51
  38. package/esm/LinearGenomeView/components/Highlight.d.ts +1 -1
  39. package/esm/LinearGenomeView/components/Highlight.js +19 -23
  40. package/esm/LinearGenomeView/components/HighlightBand.d.ts +3 -2
  41. package/esm/LinearGenomeView/components/HighlightBand.js +25 -8
  42. package/esm/LinearGenomeView/components/HighlightChip.d.ts +9 -0
  43. package/esm/LinearGenomeView/components/HighlightChip.js +15 -0
  44. package/esm/LinearGenomeView/components/HoverPositionHighlight.d.ts +12 -0
  45. package/esm/LinearGenomeView/components/HoverPositionHighlight.js +25 -0
  46. package/esm/LinearGenomeView/components/ImportForm.d.ts +3 -4
  47. package/esm/LinearGenomeView/components/ImportForm.js +95 -61
  48. package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +1 -1
  49. package/esm/LinearGenomeView/components/LinearGenomeView.js +6 -5
  50. package/esm/LinearGenomeView/components/LinearGenomeViewContainer.d.ts +1 -1
  51. package/esm/LinearGenomeView/components/LinearGenomeViewContainer.js +89 -30
  52. package/esm/LinearGenomeView/components/MiniControls.d.ts +1 -1
  53. package/esm/LinearGenomeView/components/MiniControls.js +13 -10
  54. package/esm/LinearGenomeView/components/MotifListPanel.d.ts +3 -0
  55. package/esm/LinearGenomeView/components/MotifListPanel.js +59 -0
  56. package/esm/LinearGenomeView/components/NavigationAnnouncer.d.ts +32 -0
  57. package/esm/LinearGenomeView/components/NavigationAnnouncer.js +51 -0
  58. package/esm/LinearGenomeView/components/NoTracksActiveButton.d.ts +1 -1
  59. package/esm/LinearGenomeView/components/NoTracksActiveButton.js +1 -1
  60. package/esm/LinearGenomeView/components/OverviewHighlight.d.ts +2 -4
  61. package/esm/LinearGenomeView/components/OverviewHighlight.js +23 -44
  62. package/esm/LinearGenomeView/components/OverviewHighlightBand.d.ts +9 -0
  63. package/esm/LinearGenomeView/components/OverviewHighlightBand.js +26 -0
  64. package/esm/LinearGenomeView/components/OverviewRubberband.d.ts +3 -3
  65. package/esm/LinearGenomeView/components/OverviewRubberband.js +44 -57
  66. package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.d.ts +4 -5
  67. package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +13 -20
  68. package/esm/LinearGenomeView/components/OverviewScalebar.d.ts +3 -2
  69. package/esm/LinearGenomeView/components/OverviewScalebar.js +84 -79
  70. package/esm/LinearGenomeView/components/OverviewScalebarPolygon.d.ts +19 -5
  71. package/esm/LinearGenomeView/components/OverviewScalebarPolygon.js +55 -32
  72. package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.d.ts +4 -5
  73. package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.js +16 -18
  74. package/esm/LinearGenomeView/components/PaddingBlocks.d.ts +7 -0
  75. package/esm/LinearGenomeView/components/PaddingBlocks.js +61 -0
  76. package/esm/LinearGenomeView/components/RangeSelectOverlay.d.ts +9 -0
  77. package/esm/LinearGenomeView/components/RangeSelectOverlay.js +20 -0
  78. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +2 -3
  79. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.js +19 -26
  80. package/esm/LinearGenomeView/components/Rubberband.d.ts +1 -1
  81. package/esm/LinearGenomeView/components/Rubberband.js +13 -16
  82. package/esm/LinearGenomeView/components/SVGHighlightBand.d.ts +10 -0
  83. package/esm/LinearGenomeView/components/SVGHighlightBand.js +9 -0
  84. package/esm/LinearGenomeView/components/Scalebar.d.ts +2 -2
  85. package/esm/LinearGenomeView/components/Scalebar.js +16 -21
  86. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +1 -1
  87. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.js +54 -35
  88. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +1 -1
  89. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.js +142 -126
  90. package/esm/LinearGenomeView/components/SearchBox.d.ts +22 -2
  91. package/esm/LinearGenomeView/components/SearchBox.js +58 -66
  92. package/esm/LinearGenomeView/components/SearchPanelForm.d.ts +9 -0
  93. package/esm/LinearGenomeView/components/SearchPanelForm.js +18 -0
  94. package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +3 -3
  95. package/esm/LinearGenomeView/components/SearchResultsDialog.js +5 -7
  96. package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +4 -3
  97. package/esm/LinearGenomeView/components/SearchResultsTable.js +45 -53
  98. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.d.ts +5 -0
  99. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.js +37 -0
  100. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.d.ts +2 -0
  101. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.js +5 -0
  102. package/esm/LinearGenomeView/components/SequencePatternPanel.d.ts +3 -0
  103. package/esm/LinearGenomeView/components/SequencePatternPanel.js +42 -0
  104. package/esm/LinearGenomeView/components/SequenceSearchDialog.d.ts +2 -2
  105. package/esm/LinearGenomeView/components/SequenceSearchDialog.js +31 -53
  106. package/esm/LinearGenomeView/components/StrandCheckboxes.d.ts +8 -0
  107. package/esm/LinearGenomeView/components/StrandCheckboxes.js +13 -0
  108. package/esm/LinearGenomeView/components/TrackContainer.d.ts +1 -1
  109. package/esm/LinearGenomeView/components/TrackContainer.js +83 -39
  110. package/esm/LinearGenomeView/components/TrackLabel.d.ts +2 -3
  111. package/esm/LinearGenomeView/components/TrackLabel.js +11 -24
  112. package/esm/LinearGenomeView/components/TrackLabelButtons.d.ts +7 -0
  113. package/esm/LinearGenomeView/components/TrackLabelButtons.js +33 -0
  114. package/esm/LinearGenomeView/components/TrackLabelDragHandle.d.ts +2 -5
  115. package/esm/LinearGenomeView/components/TrackLabelDragHandle.js +6 -2
  116. package/esm/LinearGenomeView/components/TrackLabelMenu.d.ts +1 -1
  117. package/esm/LinearGenomeView/components/TrackLabelMenu.js +32 -85
  118. package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.d.ts +22 -0
  119. package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.js +46 -0
  120. package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +1 -1
  121. package/esm/LinearGenomeView/components/TrackRenderingContainer.js +72 -18
  122. package/esm/LinearGenomeView/components/TracksContainer.d.ts +1 -1
  123. package/esm/LinearGenomeView/components/TracksContainer.js +65 -32
  124. package/esm/LinearGenomeView/components/VerticalGuide.d.ts +1 -1
  125. package/esm/LinearGenomeView/components/VerticalGuide.js +6 -13
  126. package/esm/LinearGenomeView/components/ZoomButton.d.ts +7 -0
  127. package/esm/LinearGenomeView/components/ZoomButton.js +27 -0
  128. package/esm/LinearGenomeView/components/ZoomTransform.d.ts +9 -0
  129. package/esm/LinearGenomeView/components/ZoomTransform.js +37 -0
  130. package/esm/LinearGenomeView/components/defaultMotifs.d.ts +1 -0
  131. package/esm/LinearGenomeView/components/defaultMotifs.js +22 -0
  132. package/esm/LinearGenomeView/components/fetchSequence.d.ts +7 -8
  133. package/esm/LinearGenomeView/components/fetchSequence.js +17 -9
  134. package/esm/LinearGenomeView/components/recentLocationsMenu.d.ts +15 -0
  135. package/esm/LinearGenomeView/components/recentLocationsMenu.js +36 -0
  136. package/esm/LinearGenomeView/components/searchModes.d.ts +13 -0
  137. package/esm/LinearGenomeView/components/searchModes.js +22 -0
  138. package/esm/LinearGenomeView/components/trackLabelMenuItems.d.ts +7 -0
  139. package/esm/LinearGenomeView/components/trackLabelMenuItems.js +67 -0
  140. package/esm/LinearGenomeView/components/useRangeSelect.d.ts +11 -66
  141. package/esm/LinearGenomeView/components/useRangeSelect.js +82 -91
  142. package/esm/LinearGenomeView/components/useSearchBoxPrefs.d.ts +26 -0
  143. package/esm/LinearGenomeView/components/useSearchBoxPrefs.js +58 -0
  144. package/esm/LinearGenomeView/components/useSideScroll.d.ts +1 -1
  145. package/esm/LinearGenomeView/components/useSideScroll.js +87 -19
  146. package/esm/LinearGenomeView/components/util.d.ts +20 -6
  147. package/esm/LinearGenomeView/components/util.js +27 -6
  148. package/esm/LinearGenomeView/consts.d.ts +7 -2
  149. package/esm/LinearGenomeView/consts.js +18 -2
  150. package/esm/LinearGenomeView/flyTo.d.ts +38 -0
  151. package/esm/LinearGenomeView/flyTo.js +135 -0
  152. package/esm/LinearGenomeView/headerFit.d.ts +27 -0
  153. package/esm/LinearGenomeView/headerFit.js +59 -0
  154. package/esm/LinearGenomeView/index.d.ts +32 -2
  155. package/esm/LinearGenomeView/index.js +16 -6
  156. package/esm/LinearGenomeView/initKeys.d.ts +12 -0
  157. package/esm/LinearGenomeView/initKeys.js +68 -0
  158. package/esm/LinearGenomeView/keyboardHandler.d.ts +7 -0
  159. package/esm/LinearGenomeView/keyboardHandler.js +10 -0
  160. package/esm/LinearGenomeView/launchKeys.d.ts +2 -0
  161. package/esm/LinearGenomeView/launchKeys.js +23 -0
  162. package/esm/LinearGenomeView/lazyDialogs.d.ts +7 -11
  163. package/esm/LinearGenomeView/lazyDialogs.js +3 -3
  164. package/esm/LinearGenomeView/linkedViewSync.d.ts +20 -0
  165. package/esm/LinearGenomeView/linkedViewSync.js +58 -0
  166. package/esm/LinearGenomeView/menuItems.d.ts +27 -2
  167. package/esm/LinearGenomeView/menuItems.js +137 -101
  168. package/esm/LinearGenomeView/model.d.ts +3238 -136
  169. package/esm/LinearGenomeView/model.js +2425 -528
  170. package/esm/LinearGenomeView/sharedScaleContainer.d.ts +18 -0
  171. package/esm/LinearGenomeView/sharedScaleContainer.js +17 -0
  172. package/esm/LinearGenomeView/showRegionsWithUndo.d.ts +35 -0
  173. package/esm/LinearGenomeView/showRegionsWithUndo.js +44 -0
  174. package/esm/LinearGenomeView/stickyChrome.d.ts +19 -0
  175. package/esm/LinearGenomeView/stickyChrome.js +30 -0
  176. package/esm/LinearGenomeView/svgcomponents/SVGGridlines.d.ts +1 -1
  177. package/esm/LinearGenomeView/svgcomponents/SVGGridlines.js +15 -16
  178. package/esm/LinearGenomeView/svgcomponents/SVGHeader.d.ts +2 -3
  179. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +45 -33
  180. package/esm/LinearGenomeView/svgcomponents/SVGHighlights.d.ts +5 -0
  181. package/esm/LinearGenomeView/svgcomponents/SVGHighlights.js +26 -0
  182. package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.d.ts +5 -0
  183. package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.js +13 -0
  184. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +1 -3
  185. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +77 -41
  186. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts +1 -1
  187. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +23 -3
  188. package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.d.ts +8 -0
  189. package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.js +37 -0
  190. package/esm/LinearGenomeView/svgcomponents/SVGRuler.d.ts +3 -3
  191. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +64 -36
  192. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +1 -1
  193. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js +7 -5
  194. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +5 -3
  195. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js +43 -7
  196. package/esm/LinearGenomeView/svgcomponents/SVGTracks.d.ts +8 -14
  197. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +16 -21
  198. package/esm/LinearGenomeView/svgcomponents/SVGView.d.ts +18 -0
  199. package/esm/LinearGenomeView/svgcomponents/SVGView.js +13 -0
  200. package/esm/LinearGenomeView/svgcomponents/figureContract.d.ts +45 -0
  201. package/esm/LinearGenomeView/svgcomponents/figureContract.js +130 -0
  202. package/esm/LinearGenomeView/svgcomponents/renderViewTracks.d.ts +76 -0
  203. package/esm/LinearGenomeView/svgcomponents/renderViewTracks.js +66 -0
  204. package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.d.ts +70 -0
  205. package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.js +263 -0
  206. package/esm/LinearGenomeView/svgcomponents/util.d.ts +92 -5
  207. package/esm/LinearGenomeView/svgcomponents/util.js +236 -3
  208. package/esm/LinearGenomeView/types.d.ts +17 -31
  209. package/esm/LinearGenomeView/types.js +1 -0
  210. package/esm/LinearGenomeView/util.d.ts +332 -12
  211. package/esm/LinearGenomeView/util.js +606 -62
  212. package/esm/MultiLevelRubberband/MultiLevelRubberband.d.ts +6 -0
  213. package/esm/MultiLevelRubberband/MultiLevelRubberband.js +37 -0
  214. package/esm/MultiLevelRubberband/VerticalGuide.d.ts +6 -0
  215. package/esm/MultiLevelRubberband/VerticalGuide.js +21 -0
  216. package/esm/MultiLevelRubberband/index.d.ts +2 -0
  217. package/esm/MultiLevelRubberband/index.js +1 -0
  218. package/esm/MultiLevelRubberband/types.d.ts +6 -0
  219. package/esm/MultiLevelRubberband/useRangeSelect.d.ts +24 -0
  220. package/esm/MultiLevelRubberband/useRangeSelect.js +136 -0
  221. package/esm/displayKitTests/perRegionTestEnv.d.ts +1286 -0
  222. package/esm/displayKitTests/perRegionTestEnv.js +138 -0
  223. package/esm/index.d.ts +122 -1235
  224. package/esm/index.js +101 -24
  225. package/esm/lazyPluginExports.d.ts +23 -0
  226. package/esm/lazyPluginExports.js +36 -0
  227. package/esm/searchUtils.d.ts +55 -11
  228. package/esm/searchUtils.js +342 -45
  229. package/esm/shared/RubberbandSpan.d.ts +15 -0
  230. package/esm/shared/RubberbandSpan.js +33 -0
  231. package/esm/shared/coordLabels.d.ts +40 -0
  232. package/esm/shared/coordLabels.js +119 -0
  233. package/package.json +18 -19
  234. package/esm/BaseLinearDisplay/SVGLegend.d.ts +0 -6
  235. package/esm/BaseLinearDisplay/SVGLegend.js +0 -17
  236. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.d.ts +0 -2
  237. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.js +0 -11
  238. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +0 -8
  239. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -53
  240. package/esm/BaseLinearDisplay/components/Block.d.ts +0 -14
  241. package/esm/BaseLinearDisplay/components/Block.js +0 -45
  242. package/esm/BaseLinearDisplay/components/BlockErrorMessage.d.ts +0 -7
  243. package/esm/BaseLinearDisplay/components/BlockErrorMessage.js +0 -22
  244. package/esm/BaseLinearDisplay/components/BlockMsg.d.ts +0 -6
  245. package/esm/BaseLinearDisplay/components/BlockMsg.js +0 -26
  246. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.d.ts +0 -9
  247. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.js +0 -42
  248. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.d.ts +0 -11
  249. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.js +0 -40
  250. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.d.ts +0 -19
  251. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.js +0 -45
  252. package/esm/BaseLinearDisplay/components/FloatingLabels.d.ts +0 -5
  253. package/esm/BaseLinearDisplay/components/FloatingLabels.js +0 -75
  254. package/esm/BaseLinearDisplay/components/FloatingLegend.d.ts +0 -8
  255. package/esm/BaseLinearDisplay/components/FloatingLegend.js +0 -43
  256. package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +0 -5
  257. package/esm/BaseLinearDisplay/components/LinearBlocks.js +0 -23
  258. package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +0 -5
  259. package/esm/BaseLinearDisplay/components/LoadingOverlay.js +0 -49
  260. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.d.ts +0 -4
  261. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.js +0 -26
  262. package/esm/BaseLinearDisplay/components/MenuPage.d.ts +0 -8
  263. package/esm/BaseLinearDisplay/components/MenuPage.js +0 -24
  264. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +0 -21
  265. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +0 -52
  266. package/esm/BaseLinearDisplay/components/RenderedBlocks.d.ts +0 -12
  267. package/esm/BaseLinearDisplay/components/RenderedBlocks.js +0 -22
  268. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +0 -12
  269. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -18
  270. package/esm/BaseLinearDisplay/components/TooLargeMessage.d.ts +0 -10
  271. package/esm/BaseLinearDisplay/components/TooLargeMessage.js +0 -20
  272. package/esm/BaseLinearDisplay/components/Tooltip.d.ts +0 -13
  273. package/esm/BaseLinearDisplay/components/Tooltip.js +0 -22
  274. package/esm/BaseLinearDisplay/components/types.d.ts +0 -1
  275. package/esm/BaseLinearDisplay/components/util.d.ts +0 -21
  276. package/esm/BaseLinearDisplay/components/util.js +0 -107
  277. package/esm/BaseLinearDisplay/index.d.ts +0 -17
  278. package/esm/BaseLinearDisplay/index.js +0 -13
  279. package/esm/BaseLinearDisplay/model.d.ts +0 -1197
  280. package/esm/BaseLinearDisplay/model.js +0 -432
  281. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +0 -32
  282. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -113
  283. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.d.ts +0 -26
  284. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.js +0 -57
  285. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.d.ts +0 -8
  286. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.js +0 -19
  287. package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +0 -11
  288. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +0 -31
  289. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +0 -2
  290. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -29
  291. package/esm/BaseLinearDisplay/models/configSchema.d.ts +0 -29
  292. package/esm/BaseLinearDisplay/models/configSchema.js +0 -33
  293. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +0 -98
  294. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -242
  295. package/esm/BaseLinearDisplay/models/util.d.ts +0 -9
  296. package/esm/BaseLinearDisplay/models/util.js +0 -43
  297. package/esm/BaseLinearDisplay/renderSvg.d.ts +0 -3
  298. package/esm/BaseLinearDisplay/renderSvg.js +0 -63
  299. package/esm/BaseLinearDisplay/types.d.ts +0 -43
  300. package/esm/BaseLinearDisplay/types.js +0 -3
  301. package/esm/BaseLinearDisplay/util.d.ts +0 -16
  302. package/esm/BaseLinearDisplay/util.js +0 -71
  303. package/esm/BasicTrack/configSchema.d.ts +0 -85
  304. package/esm/BasicTrack/configSchema.js +0 -8
  305. package/esm/BasicTrack/index.d.ts +0 -2
  306. package/esm/BasicTrack/index.js +0 -12
  307. package/esm/LinearBareDisplay/configSchema.d.ts +0 -32
  308. package/esm/LinearBareDisplay/configSchema.js +0 -11
  309. package/esm/LinearBareDisplay/index.d.ts +0 -4
  310. package/esm/LinearBareDisplay/index.js +0 -20
  311. package/esm/LinearBareDisplay/model.d.ts +0 -1196
  312. package/esm/LinearBareDisplay/model.js +0 -32
  313. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.d.ts +0 -5
  314. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.js +0 -9
  315. package/esm/LinearBasicDisplay/configSchema.d.ts +0 -32
  316. package/esm/LinearBasicDisplay/configSchema.js +0 -11
  317. package/esm/LinearBasicDisplay/index.d.ts +0 -4
  318. package/esm/LinearBasicDisplay/index.js +0 -20
  319. package/esm/LinearBasicDisplay/model.d.ts +0 -1391
  320. package/esm/LinearBasicDisplay/model.js +0 -158
  321. package/esm/LinearFeatureDisplay/components/AddFiltersDialog.d.ts +0 -9
  322. package/esm/LinearFeatureDisplay/components/AddFiltersDialog.js +0 -58
  323. package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.d.ts +0 -8
  324. package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.js +0 -26
  325. package/esm/LinearFeatureDisplay/configSchema.d.ts +0 -32
  326. package/esm/LinearFeatureDisplay/configSchema.js +0 -11
  327. package/esm/LinearFeatureDisplay/index.d.ts +0 -3
  328. package/esm/LinearFeatureDisplay/index.js +0 -2
  329. package/esm/LinearFeatureDisplay/model.d.ts +0 -1443
  330. package/esm/LinearFeatureDisplay/model.js +0 -305
  331. package/esm/LinearGenomeView/SVGErrorBox.d.ts +0 -5
  332. package/esm/LinearGenomeView/SVGErrorBox.js +0 -4
  333. package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.d.ts +0 -11
  334. package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +0 -27
  335. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +0 -5
  336. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -13
  337. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +0 -3
  338. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -17
  339. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.d.ts +0 -3
  340. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -8
  341. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +0 -16
  342. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -101
  343. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +0 -10
  344. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -45
  345. package/esm/LinearGenomeView/components/RubberbandSpan.d.ts +0 -15
  346. package/esm/LinearGenomeView/components/RubberbandSpan.js +0 -32
  347. package/esm/LinearGenomeView/components/RubberbandTooltip.d.ts +0 -5
  348. package/esm/LinearGenomeView/components/RubberbandTooltip.js +0 -17
  349. package/esm/LinearGenomeView/components/TrackLabelContainer.d.ts +0 -8
  350. package/esm/LinearGenomeView/components/TrackLabelContainer.js +0 -25
  351. package/esm/LinearGenomeView/components/useWheelScroll.d.ts +0 -7
  352. package/esm/LinearGenomeView/components/useWheelScroll.js +0 -69
  353. package/esm/LinearGenomeView/svgExportUtil.d.ts +0 -9
  354. package/esm/LinearGenomeView/svgExportUtil.js +0 -6
  355. package/esm/LinearGenomeView/svgcomponents/SVGBackground.d.ts +0 -5
  356. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js +0 -7
  357. /package/esm/{BaseLinearDisplay/components → MultiLevelRubberband}/types.js +0 -0
@@ -0,0 +1,1286 @@
1
+ import { createDisplayTestEnvironment } from '@jbrowse/display-test-utils';
2
+ import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
3
+ import type { IndexedRegion } from '@jbrowse/display-kit/planRegionFetch';
4
+ import type { Instance } from '@jbrowse/mobx-state-tree';
5
+ /**
6
+ * The knobs a test needs on the display's fetch, held in a closure rather than
7
+ * as volatiles. `regionHasData` must stay a **view** — as an action MobX runs it
8
+ * untracked and the autorun keeps a stale answer (see the hook block in
9
+ * `MultiRegionDisplayMixin`) — and a view may not write, so its call counter
10
+ * cannot live in the tree.
11
+ */
12
+ export interface PerRegionTestControl {
13
+ /** how many times the fetch autorun has asked `regionHasData` */
14
+ cacheValidCalls: number;
15
+ /**
16
+ * How many further `regionHasData` calls answer false, decremented each time.
17
+ * Bounded on purpose: a permanently-invalid cache refetches forever, which is
18
+ * correct behavior and an unfalsifiable test.
19
+ */
20
+ staleAnswers: number;
21
+ /** the next fetch rejects, the way a failed RPC does */
22
+ failNextFetch: boolean;
23
+ /** hold each fetch open this long, so a test can act while one is in flight */
24
+ fetchDelayMs: number;
25
+ /**
26
+ * What the display's own fetch measures for a region, and how often it
27
+ * measured. There is no separate estimate RPC any more: a gated display
28
+ * passes `resolvedByteLimit()` into its fetch, the fetch measures first and
29
+ * answers a `RegionTooLargeResult` instead of a payload when it is over — so
30
+ * this stands in for the worker-side `measureRegionBytes`.
31
+ */
32
+ estimateBytes: number;
33
+ estimateCalls: number;
34
+ /** the display's own density verdict, canvas's second too-large axis */
35
+ densityTooLarge: boolean;
36
+ }
37
+ /**
38
+ * The smallest possible display on `MultiRegionDisplayMixin`: it fetches, it
39
+ * records what it was asked to fetch, and it does nothing else. Nine real
40
+ * displays compose this foundation, and every one of them adds a plugin's worth
41
+ * of behavior on top — so a test that boots one is testing that plugin as much
42
+ * as the foundation, which is how the foundation's own autoruns came to be
43
+ * pinned only by canvas's suite.
44
+ */
45
+ /** Which of the gate's opt-in hooks this display overrides. */
46
+ export interface GateOptIns {
47
+ gateEnabled?: boolean;
48
+ }
49
+ declare function makeStateModel(control: PerRegionTestControl, gate: GateOptIns, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<Omit<Omit<Omit<{
50
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
51
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
52
+ }, never>, never> & Omit<Omit<Omit<{}, never>, never>, never>, "configuration" | "type"> & {
53
+ type: import("@jbrowse/mobx-state-tree").ILiteralType<"PerRegionTestDisplay">;
54
+ configuration: import("@jbrowse/core/configuration/configurationSchema").IConfigurationReference<AnyConfigurationSchemaType>;
55
+ }, {
56
+ error: unknown;
57
+ statusMessage: string | undefined;
58
+ statusProgress: number | undefined;
59
+ } & {
60
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
61
+ } & {
62
+ readonly RenderingComponent: React.FC<{
63
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
64
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
65
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
66
+ }> & {
67
+ error: unknown;
68
+ statusMessage: string | undefined;
69
+ statusProgress: number | undefined;
70
+ } & {
71
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
72
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
73
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
74
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
75
+ }, {
76
+ error: unknown;
77
+ statusMessage: string | undefined;
78
+ statusProgress: number | undefined;
79
+ } & {
80
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
81
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
82
+ onHorizontalScroll?: (distance: number) => void;
83
+ blockState?: Record<string, unknown>;
84
+ }>;
85
+ readonly DisplayBlurb: React.FC<{
86
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
87
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
88
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
89
+ }> & {
90
+ error: unknown;
91
+ statusMessage: string | undefined;
92
+ statusProgress: number | undefined;
93
+ } & {
94
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
95
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
96
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
97
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
98
+ }, {
99
+ error: unknown;
100
+ statusMessage: string | undefined;
101
+ statusProgress: number | undefined;
102
+ } & {
103
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
104
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
105
+ }> | null;
106
+ readonly adapterConfig: Record<string, unknown>;
107
+ readonly isMinimized: boolean;
108
+ readonly hoveredFeature: unknown;
109
+ readonly featureNoun: string;
110
+ readonly featureWidgetType: {
111
+ type: string;
112
+ id: string;
113
+ };
114
+ } & {
115
+ renderingProps(): {
116
+ displayModel: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
117
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
118
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
119
+ }> & {
120
+ error: unknown;
121
+ statusMessage: string | undefined;
122
+ statusProgress: number | undefined;
123
+ } & {
124
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
125
+ } & {
126
+ readonly RenderingComponent: React.FC<{
127
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
128
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
129
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
130
+ }> & {
131
+ error: unknown;
132
+ statusMessage: string | undefined;
133
+ statusProgress: number | undefined;
134
+ } & {
135
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
136
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
137
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
138
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
139
+ }, {
140
+ error: unknown;
141
+ statusMessage: string | undefined;
142
+ statusProgress: number | undefined;
143
+ } & {
144
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
145
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
146
+ onHorizontalScroll?: (distance: number) => void;
147
+ blockState?: Record<string, unknown>;
148
+ }>;
149
+ readonly DisplayBlurb: React.FC<{
150
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
151
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
152
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
153
+ }> & {
154
+ error: unknown;
155
+ statusMessage: string | undefined;
156
+ statusProgress: number | undefined;
157
+ } & {
158
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
159
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
160
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
161
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
162
+ }, {
163
+ error: unknown;
164
+ statusMessage: string | undefined;
165
+ statusProgress: number | undefined;
166
+ } & {
167
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
168
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
169
+ }> | null;
170
+ readonly adapterConfig: Record<string, unknown>;
171
+ readonly isMinimized: boolean;
172
+ readonly hoveredFeature: unknown;
173
+ readonly featureNoun: string;
174
+ readonly featureWidgetType: {
175
+ type: string;
176
+ id: string;
177
+ };
178
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
179
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
180
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
181
+ }, {
182
+ error: unknown;
183
+ statusMessage: string | undefined;
184
+ statusProgress: number | undefined;
185
+ } & {
186
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
187
+ } & {
188
+ readonly RenderingComponent: React.FC<{
189
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
190
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
191
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
192
+ }> & {
193
+ error: unknown;
194
+ statusMessage: string | undefined;
195
+ statusProgress: number | undefined;
196
+ } & {
197
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
198
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
199
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
200
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
201
+ }, {
202
+ error: unknown;
203
+ statusMessage: string | undefined;
204
+ statusProgress: number | undefined;
205
+ } & {
206
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
207
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
208
+ onHorizontalScroll?: (distance: number) => void;
209
+ blockState?: Record<string, unknown>;
210
+ }>;
211
+ readonly DisplayBlurb: React.FC<{
212
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
213
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
214
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
215
+ }> & {
216
+ error: unknown;
217
+ statusMessage: string | undefined;
218
+ statusProgress: number | undefined;
219
+ } & {
220
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
221
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
222
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
223
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
224
+ }, {
225
+ error: unknown;
226
+ statusMessage: string | undefined;
227
+ statusProgress: number | undefined;
228
+ } & {
229
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
230
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
231
+ }> | null;
232
+ readonly adapterConfig: Record<string, unknown>;
233
+ readonly isMinimized: boolean;
234
+ readonly hoveredFeature: unknown;
235
+ readonly featureNoun: string;
236
+ readonly featureWidgetType: {
237
+ type: string;
238
+ id: string;
239
+ };
240
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
241
+ };
242
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
243
+ } & {
244
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
245
+ setError(error?: unknown): void;
246
+ clearHoveredFeature(): void;
247
+ reload(): void;
248
+ applyDisplaySettings(settings: Record<string, unknown>, options?: {
249
+ allowSetters?: boolean;
250
+ }): {
251
+ applied: string[];
252
+ unapplied: string[];
253
+ failed: {
254
+ key: string;
255
+ error: string;
256
+ }[];
257
+ };
258
+ } & {
259
+ scrollTop: number;
260
+ } & {
261
+ readonly height: number;
262
+ readonly resizing: boolean;
263
+ readonly scrollableHeight: number;
264
+ } & {
265
+ setScrollTop(scrollTop: number): void;
266
+ setHeight(displayHeight: number): number;
267
+ resizeHeight(distance: number): number;
268
+ } & {
269
+ expandToContentHeight(): number;
270
+ afterAttach(): void;
271
+ } & {
272
+ forceLoadTrack: boolean;
273
+ byteEstimate: import("@jbrowse/display-kit/regionTooLargeUtils").ByteEstimate | undefined;
274
+ gateMeasuredViewportKey: string | undefined;
275
+ } & {
276
+ readonly gateEnabled: boolean;
277
+ readonly byteGateAdapterConfig: Record<string, unknown>;
278
+ readonly configuredFetchSizeLimit: number | undefined;
279
+ readonly densityTooLarge: boolean;
280
+ readonly byteGateAdapterPath: string[];
281
+ readonly adapterFetchSizeLimit: number | undefined;
282
+ readonly configForceLoad: boolean;
283
+ readonly gateViewport: import("@jbrowse/display-kit/regionTooLargeUtils").GateViewport | undefined;
284
+ } & {
285
+ readonly byteGateAdapterKey: string;
286
+ readonly aboveForceLoadFloor: boolean;
287
+ readonly gateExempt: boolean;
288
+ readonly estimatedFetchBytes: number | undefined;
289
+ readonly gateMeasurementStale: boolean;
290
+ } & {
291
+ readonly gateByteLimit: number;
292
+ readonly gateActive: boolean;
293
+ } & {
294
+ readonly densityGateActive: boolean;
295
+ resolvedByteLimit(): number | undefined;
296
+ gateFetchState(): import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState;
297
+ } & {
298
+ readonly tooLargeStatus: import("@jbrowse/display-kit/regionTooLargeUtils").RegionTooLargeStatus;
299
+ } & {
300
+ readonly regionTooLarge: boolean;
301
+ readonly regionTooLargeReason: string;
302
+ readonly zoomCanReleaseGate: boolean;
303
+ } & {
304
+ readonly gateSkipsMeasuredViewport: boolean;
305
+ } & {
306
+ clearByteEstimate(): void;
307
+ setForceLoadTrack(flag: boolean): void;
308
+ } & {
309
+ commitFetchBytes(perRegionBytes: (number | undefined)[], issued: import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState, partial?: boolean): void;
310
+ } & {
311
+ forceLoad(): void;
312
+ } & {
313
+ afterAttach(): void;
314
+ } & {
315
+ canvasDrawn: boolean;
316
+ currentRenderingBackend: unknown;
317
+ renderTick: number;
318
+ autorunsInstalled: boolean;
319
+ renderError: unknown;
320
+ } & {
321
+ readonly canRender: boolean;
322
+ readonly rendersCanvas: boolean;
323
+ readonly paintInert: boolean;
324
+ } & {
325
+ readonly painted: boolean;
326
+ } & {
327
+ markCanvasDrawn(): void;
328
+ resetCanvasDrawn(): void;
329
+ stopRenderingBackend(): void;
330
+ renderNow(): void;
331
+ setRenderError(error: unknown): void;
332
+ } & {
333
+ attachRenderingBackend<B>(backend: B, setup: () => import("@jbrowse/render-core/RenderLifecycleMixin").RenderingBackendCallbacks<B>): void;
334
+ } & {
335
+ activeStopToken: import("@jbrowse/core/util").StopToken | undefined;
336
+ fetchGeneration: number;
337
+ reloadCounter: number;
338
+ statusWindow: import("@jbrowse/core/util").StatusWindow;
339
+ error: unknown;
340
+ statusMessage: string | undefined;
341
+ statusProgress: number | undefined;
342
+ fetchCanceled: boolean;
343
+ } & {
344
+ fetchRotation: {
345
+ begin(): import("@jbrowse/core/util").ActiveFetch;
346
+ cancel: () => void;
347
+ dispose(): void;
348
+ };
349
+ } & {
350
+ readonly isLoading: boolean;
351
+ } & {
352
+ readonly isLoadingOrCanceled: boolean;
353
+ readonly fetchInert: boolean;
354
+ readonly awaitingPrerequisite: boolean;
355
+ readonly awaitingDependentData: boolean;
356
+ readonly rpcPropsCacheKey: string;
357
+ } & {
358
+ setError(error?: unknown): void;
359
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
360
+ } & {
361
+ stopActiveFetch(): void;
362
+ openStatusStream(isCurrent: () => boolean): import("@jbrowse/core/util").StatusStream;
363
+ } & {
364
+ cancelFetch(): void;
365
+ cancelFetchByUser(): void;
366
+ reload(): void;
367
+ beforeDestroy(): void;
368
+ beginFetch(stopToken: import("@jbrowse/core/util").StopToken): void;
369
+ endFetch(current: boolean): void;
370
+ } & {
371
+ runFetch: (work: (ctx: import("@jbrowse/display-kit/FetchMixin").FetchContext) => Promise<void>) => Promise<void>;
372
+ } & {
373
+ loadedRegions: import("mobx").ObservableMap<number, import("@jbrowse/display-kit/regionCommit").LoadedRegion>;
374
+ } & {
375
+ readonly host: import("@jbrowse/display-kit/regionHost").RegionHost;
376
+ readonly canvasWidthPx: number;
377
+ readonly canRender: boolean;
378
+ readonly rendersCanvas: boolean;
379
+ readonly viewportWithinLoadedData: boolean;
380
+ readonly viewportEmpty: boolean;
381
+ readonly fetchSuspended: boolean;
382
+ readonly layoutReady: boolean;
383
+ readonly regionFetchKey: string;
384
+ regionHasData(_displayedRegionIndex: number): boolean;
385
+ readonly dataSuperseded: boolean;
386
+ readonly renderBlocks: import("@jbrowse/render-core/renderBlock").RenderBlock[];
387
+ } & {
388
+ isCacheValid(displayedRegionIndex: number): boolean;
389
+ } & {
390
+ readonly dataCurrent: boolean;
391
+ readonly loadedAssembly: import("@jbrowse/core/assemblyManager/assembly").Assembly | undefined;
392
+ } & {
393
+ readonly svgReady: boolean;
394
+ readonly paintInert: boolean;
395
+ readonly displayPhase: import("@jbrowse/render-core/displayPhase").DisplayPhase;
396
+ } & {
397
+ setLoadedRegion(displayedRegionIndex: number, region: import("@jbrowse/core/util").Region, fetchKey?: string): void;
398
+ dropLoadedRegion(displayedRegionIndex: number): void;
399
+ clearDisplaySpecificData(): void;
400
+ } & {
401
+ clearAllRpcData(): void;
402
+ reload(): void;
403
+ } & {
404
+ fetchNeeded(_needed: IndexedRegion[]): void;
405
+ } & {
406
+ fetchRegions(needed: IndexedRegion[], work: (ctx: import("@jbrowse/display-kit/regionCommit").RegionFetchContext) => Promise<void>): Promise<void>;
407
+ } & {
408
+ afterAttach(): void;
409
+ } & {
410
+ /** every `fetchNeeded` call, as the region list it was handed */
411
+ fetchLog: IndexedRegion[][];
412
+ loadedData: Map<number, string>;
413
+ /**
414
+ * What `regionFetchKey` answers. A volatile, not a `control` knob, and
415
+ * that is the point: a real display's key reads view state, so the
416
+ * autorun re-runs when it moves. A plain closure value would be memoized
417
+ * by the computed and never invalidate.
418
+ */
419
+ fetchKey: string;
420
+ } & {
421
+ readonly gateEnabled: boolean;
422
+ readonly densityTooLarge: boolean;
423
+ readonly regionFetchKey: string;
424
+ regionHasData(_displayedRegionIndex: number): boolean;
425
+ } & {
426
+ setFetchKey(key: string): void;
427
+ setLoaded(displayedRegionIndex: number, value: string): void;
428
+ clearDisplaySpecificData(): void;
429
+ } & {
430
+ fetchNeeded(needed: IndexedRegion[]): Promise<void>;
431
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>;
432
+ export type PerRegionTestDisplay = Instance<ReturnType<typeof makeStateModel>>;
433
+ /**
434
+ * A real `MultiRegionDisplayMixin` display inside a real `LinearGenomeView`, so
435
+ * `afterAttach` runs and `installPerRegionFetchAutoruns` installs for real.
436
+ */
437
+ export declare function createPerRegionTestEnvironment({ measuresBytes, gate, estimateBytes, ...opts }?: Partial<Parameters<typeof createDisplayTestEnvironment>[0]> & {
438
+ /** shorthand for `gate: { gateEnabled: true }` */
439
+ measuresBytes?: boolean;
440
+ /** which of the gate's opt-in hooks the display overrides */
441
+ gate?: GateOptIns;
442
+ /**
443
+ * What the display's fetch measures, set before the display exists. A test
444
+ * that wants the banner has to pass it here rather than raise
445
+ * `control.estimateBytes` afterwards: the fetch autorun is leading-edge, so
446
+ * the first fetch runs the moment the display attaches, and a later write
447
+ * would be measuring a display that had already loaded at the default.
448
+ */
449
+ estimateBytes?: number;
450
+ }): {
451
+ createDisplay: ({ displayedRegions, displaySnapshot, skipWidth, regionsInSnapshot, }?: {
452
+ displayedRegions?: import("@jbrowse/core/util").Region[];
453
+ displaySnapshot?: Record<string, unknown>;
454
+ skipWidth?: boolean;
455
+ regionsInSnapshot?: boolean;
456
+ }) => {
457
+ session: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
458
+ name: import("@jbrowse/mobx-state-tree").IType<string | undefined, string, string>;
459
+ view: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IAnyModelType>;
460
+ configuration: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IType<any, any, any>>;
461
+ displayTypeDefaults: import("@jbrowse/mobx-state-tree").IType<Record<string, Record<string, unknown>> | null | undefined, Record<string, Record<string, unknown>>, Record<string, Record<string, unknown>>>;
462
+ }> & {
463
+ rpcManager: unknown;
464
+ assemblyManager: unknown;
465
+ theme: import("@mui/material").Theme;
466
+ palette: import("@jbrowse/core/ui/palette").JBrowsePalette;
467
+ queuedDialogs: import("@jbrowse/display-test-utils").QueuedDialog[];
468
+ selection: unknown;
469
+ notifications: {
470
+ message: string;
471
+ level?: string;
472
+ actions: import("@jbrowse/core/util").SnackAction[];
473
+ }[];
474
+ } & {
475
+ getTrackById: (id: string) => unknown;
476
+ getDisplayTypeDefault(displayType: string, slot: string): unknown;
477
+ } & {
478
+ setView(view: any): any;
479
+ notify(message: string, level?: string, action?: import("@jbrowse/core/util").SnackAction | import("@jbrowse/core/util").SnackAction[]): void;
480
+ notifyError(message: string): void;
481
+ queueDialog(cb: (handleClose: () => void) => import("@jbrowse/display-test-utils").QueuedDialog): void;
482
+ setSelection(thing: unknown): void;
483
+ setDisplayTypeDefault(displayType: string, slot: string, value: unknown): void;
484
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
485
+ name: import("@jbrowse/mobx-state-tree").IType<string | undefined, string, string>;
486
+ view: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IAnyModelType>;
487
+ configuration: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IType<any, any, any>>;
488
+ displayTypeDefaults: import("@jbrowse/mobx-state-tree").IType<Record<string, Record<string, unknown>> | null | undefined, Record<string, Record<string, unknown>>, Record<string, Record<string, unknown>>>;
489
+ }, {
490
+ rpcManager: unknown;
491
+ assemblyManager: unknown;
492
+ theme: import("@mui/material").Theme;
493
+ palette: import("@jbrowse/core/ui/palette").JBrowsePalette;
494
+ queuedDialogs: import("@jbrowse/display-test-utils").QueuedDialog[];
495
+ selection: unknown;
496
+ notifications: {
497
+ message: string;
498
+ level?: string;
499
+ actions: import("@jbrowse/core/util").SnackAction[];
500
+ }[];
501
+ } & {
502
+ getTrackById: (id: string) => unknown;
503
+ getDisplayTypeDefault(displayType: string, slot: string): unknown;
504
+ } & {
505
+ setView(view: any): any;
506
+ notify(message: string, level?: string, action?: import("@jbrowse/core/util").SnackAction | import("@jbrowse/core/util").SnackAction[]): void;
507
+ notifyError(message: string): void;
508
+ queueDialog(cb: (handleClose: () => void) => import("@jbrowse/display-test-utils").QueuedDialog): void;
509
+ setSelection(thing: unknown): void;
510
+ setDisplayTypeDefault(displayType: string, slot: string, value: unknown): void;
511
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
512
+ view: any;
513
+ track: any;
514
+ display: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<Omit<Omit<Omit<{
515
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
516
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
517
+ }, never>, never> & Omit<Omit<Omit<{}, never>, never>, never>, "configuration" | "type"> & {
518
+ type: import("@jbrowse/mobx-state-tree").ILiteralType<"PerRegionTestDisplay">;
519
+ configuration: import("@jbrowse/core/configuration/configurationSchema").IConfigurationReference<AnyConfigurationSchemaType>;
520
+ }> & {
521
+ error: unknown;
522
+ statusMessage: string | undefined;
523
+ statusProgress: number | undefined;
524
+ } & {
525
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
526
+ } & {
527
+ readonly RenderingComponent: React.FC<{
528
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
529
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
530
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
531
+ }> & {
532
+ error: unknown;
533
+ statusMessage: string | undefined;
534
+ statusProgress: number | undefined;
535
+ } & {
536
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
537
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
538
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
539
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
540
+ }, {
541
+ error: unknown;
542
+ statusMessage: string | undefined;
543
+ statusProgress: number | undefined;
544
+ } & {
545
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
546
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
547
+ onHorizontalScroll?: (distance: number) => void;
548
+ blockState?: Record<string, unknown>;
549
+ }>;
550
+ readonly DisplayBlurb: React.FC<{
551
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
552
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
553
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
554
+ }> & {
555
+ error: unknown;
556
+ statusMessage: string | undefined;
557
+ statusProgress: number | undefined;
558
+ } & {
559
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
560
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
561
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
562
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
563
+ }, {
564
+ error: unknown;
565
+ statusMessage: string | undefined;
566
+ statusProgress: number | undefined;
567
+ } & {
568
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
569
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
570
+ }> | null;
571
+ readonly adapterConfig: Record<string, unknown>;
572
+ readonly isMinimized: boolean;
573
+ readonly hoveredFeature: unknown;
574
+ readonly featureNoun: string;
575
+ readonly featureWidgetType: {
576
+ type: string;
577
+ id: string;
578
+ };
579
+ } & {
580
+ renderingProps(): {
581
+ displayModel: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
582
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
583
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
584
+ }> & {
585
+ error: unknown;
586
+ statusMessage: string | undefined;
587
+ statusProgress: number | undefined;
588
+ } & {
589
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
590
+ } & {
591
+ readonly RenderingComponent: React.FC<{
592
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
593
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
594
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
595
+ }> & {
596
+ error: unknown;
597
+ statusMessage: string | undefined;
598
+ statusProgress: number | undefined;
599
+ } & {
600
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
601
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
602
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
603
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
604
+ }, {
605
+ error: unknown;
606
+ statusMessage: string | undefined;
607
+ statusProgress: number | undefined;
608
+ } & {
609
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
610
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
611
+ onHorizontalScroll?: (distance: number) => void;
612
+ blockState?: Record<string, unknown>;
613
+ }>;
614
+ readonly DisplayBlurb: React.FC<{
615
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
616
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
617
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
618
+ }> & {
619
+ error: unknown;
620
+ statusMessage: string | undefined;
621
+ statusProgress: number | undefined;
622
+ } & {
623
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
624
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
625
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
626
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
627
+ }, {
628
+ error: unknown;
629
+ statusMessage: string | undefined;
630
+ statusProgress: number | undefined;
631
+ } & {
632
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
633
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
634
+ }> | null;
635
+ readonly adapterConfig: Record<string, unknown>;
636
+ readonly isMinimized: boolean;
637
+ readonly hoveredFeature: unknown;
638
+ readonly featureNoun: string;
639
+ readonly featureWidgetType: {
640
+ type: string;
641
+ id: string;
642
+ };
643
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
644
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
645
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
646
+ }, {
647
+ error: unknown;
648
+ statusMessage: string | undefined;
649
+ statusProgress: number | undefined;
650
+ } & {
651
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
652
+ } & {
653
+ readonly RenderingComponent: React.FC<{
654
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
655
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
656
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
657
+ }> & {
658
+ error: unknown;
659
+ statusMessage: string | undefined;
660
+ statusProgress: number | undefined;
661
+ } & {
662
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
663
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
664
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
665
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
666
+ }, {
667
+ error: unknown;
668
+ statusMessage: string | undefined;
669
+ statusProgress: number | undefined;
670
+ } & {
671
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
672
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
673
+ onHorizontalScroll?: (distance: number) => void;
674
+ blockState?: Record<string, unknown>;
675
+ }>;
676
+ readonly DisplayBlurb: React.FC<{
677
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
678
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
679
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
680
+ }> & {
681
+ error: unknown;
682
+ statusMessage: string | undefined;
683
+ statusProgress: number | undefined;
684
+ } & {
685
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
686
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
687
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
688
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
689
+ }, {
690
+ error: unknown;
691
+ statusMessage: string | undefined;
692
+ statusProgress: number | undefined;
693
+ } & {
694
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
695
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
696
+ }> | null;
697
+ readonly adapterConfig: Record<string, unknown>;
698
+ readonly isMinimized: boolean;
699
+ readonly hoveredFeature: unknown;
700
+ readonly featureNoun: string;
701
+ readonly featureWidgetType: {
702
+ type: string;
703
+ id: string;
704
+ };
705
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
706
+ };
707
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
708
+ } & {
709
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
710
+ setError(error?: unknown): void;
711
+ clearHoveredFeature(): void;
712
+ reload(): void;
713
+ applyDisplaySettings(settings: Record<string, unknown>, options?: {
714
+ allowSetters?: boolean;
715
+ }): {
716
+ applied: string[];
717
+ unapplied: string[];
718
+ failed: {
719
+ key: string;
720
+ error: string;
721
+ }[];
722
+ };
723
+ } & {
724
+ scrollTop: number;
725
+ } & {
726
+ readonly height: number;
727
+ readonly resizing: boolean;
728
+ readonly scrollableHeight: number;
729
+ } & {
730
+ setScrollTop(scrollTop: number): void;
731
+ setHeight(displayHeight: number): number;
732
+ resizeHeight(distance: number): number;
733
+ } & {
734
+ expandToContentHeight(): number;
735
+ afterAttach(): void;
736
+ } & {
737
+ forceLoadTrack: boolean;
738
+ byteEstimate: import("@jbrowse/display-kit/regionTooLargeUtils").ByteEstimate | undefined;
739
+ gateMeasuredViewportKey: string | undefined;
740
+ } & {
741
+ readonly gateEnabled: boolean;
742
+ readonly byteGateAdapterConfig: Record<string, unknown>;
743
+ readonly configuredFetchSizeLimit: number | undefined;
744
+ readonly densityTooLarge: boolean;
745
+ readonly byteGateAdapterPath: string[];
746
+ readonly adapterFetchSizeLimit: number | undefined;
747
+ readonly configForceLoad: boolean;
748
+ readonly gateViewport: import("@jbrowse/display-kit/regionTooLargeUtils").GateViewport | undefined;
749
+ } & {
750
+ readonly byteGateAdapterKey: string;
751
+ readonly aboveForceLoadFloor: boolean;
752
+ readonly gateExempt: boolean;
753
+ readonly estimatedFetchBytes: number | undefined;
754
+ readonly gateMeasurementStale: boolean;
755
+ } & {
756
+ readonly gateByteLimit: number;
757
+ readonly gateActive: boolean;
758
+ } & {
759
+ readonly densityGateActive: boolean;
760
+ resolvedByteLimit(): number | undefined;
761
+ gateFetchState(): import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState;
762
+ } & {
763
+ readonly tooLargeStatus: import("@jbrowse/display-kit/regionTooLargeUtils").RegionTooLargeStatus;
764
+ } & {
765
+ readonly regionTooLarge: boolean;
766
+ readonly regionTooLargeReason: string;
767
+ readonly zoomCanReleaseGate: boolean;
768
+ } & {
769
+ readonly gateSkipsMeasuredViewport: boolean;
770
+ } & {
771
+ clearByteEstimate(): void;
772
+ setForceLoadTrack(flag: boolean): void;
773
+ } & {
774
+ commitFetchBytes(perRegionBytes: (number | undefined)[], issued: import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState, partial?: boolean): void;
775
+ } & {
776
+ forceLoad(): void;
777
+ } & {
778
+ afterAttach(): void;
779
+ } & {
780
+ canvasDrawn: boolean;
781
+ currentRenderingBackend: unknown;
782
+ renderTick: number;
783
+ autorunsInstalled: boolean;
784
+ renderError: unknown;
785
+ } & {
786
+ readonly canRender: boolean;
787
+ readonly rendersCanvas: boolean;
788
+ readonly paintInert: boolean;
789
+ } & {
790
+ readonly painted: boolean;
791
+ } & {
792
+ markCanvasDrawn(): void;
793
+ resetCanvasDrawn(): void;
794
+ stopRenderingBackend(): void;
795
+ renderNow(): void;
796
+ setRenderError(error: unknown): void;
797
+ } & {
798
+ attachRenderingBackend<B>(backend: B, setup: () => import("@jbrowse/render-core/RenderLifecycleMixin").RenderingBackendCallbacks<B>): void;
799
+ } & {
800
+ activeStopToken: import("@jbrowse/core/util").StopToken | undefined;
801
+ fetchGeneration: number;
802
+ reloadCounter: number;
803
+ statusWindow: import("@jbrowse/core/util").StatusWindow;
804
+ error: unknown;
805
+ statusMessage: string | undefined;
806
+ statusProgress: number | undefined;
807
+ fetchCanceled: boolean;
808
+ } & {
809
+ fetchRotation: {
810
+ begin(): import("@jbrowse/core/util").ActiveFetch;
811
+ cancel: () => void;
812
+ dispose(): void;
813
+ };
814
+ } & {
815
+ readonly isLoading: boolean;
816
+ } & {
817
+ readonly isLoadingOrCanceled: boolean;
818
+ readonly fetchInert: boolean;
819
+ readonly awaitingPrerequisite: boolean;
820
+ readonly awaitingDependentData: boolean;
821
+ readonly rpcPropsCacheKey: string;
822
+ } & {
823
+ setError(error?: unknown): void;
824
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
825
+ } & {
826
+ stopActiveFetch(): void;
827
+ openStatusStream(isCurrent: () => boolean): import("@jbrowse/core/util").StatusStream;
828
+ } & {
829
+ cancelFetch(): void;
830
+ cancelFetchByUser(): void;
831
+ reload(): void;
832
+ beforeDestroy(): void;
833
+ beginFetch(stopToken: import("@jbrowse/core/util").StopToken): void;
834
+ endFetch(current: boolean): void;
835
+ } & {
836
+ runFetch: (work: (ctx: import("@jbrowse/display-kit/FetchMixin").FetchContext) => Promise<void>) => Promise<void>;
837
+ } & {
838
+ loadedRegions: import("mobx").ObservableMap<number, import("@jbrowse/display-kit/regionCommit").LoadedRegion>;
839
+ } & {
840
+ readonly host: import("@jbrowse/display-kit/regionHost").RegionHost;
841
+ readonly canvasWidthPx: number;
842
+ readonly canRender: boolean;
843
+ readonly rendersCanvas: boolean;
844
+ readonly viewportWithinLoadedData: boolean;
845
+ readonly viewportEmpty: boolean;
846
+ readonly fetchSuspended: boolean;
847
+ readonly layoutReady: boolean;
848
+ readonly regionFetchKey: string;
849
+ regionHasData(_displayedRegionIndex: number): boolean;
850
+ readonly dataSuperseded: boolean;
851
+ readonly renderBlocks: import("@jbrowse/render-core/renderBlock").RenderBlock[];
852
+ } & {
853
+ isCacheValid(displayedRegionIndex: number): boolean;
854
+ } & {
855
+ readonly dataCurrent: boolean;
856
+ readonly loadedAssembly: import("@jbrowse/core/assemblyManager/assembly").Assembly | undefined;
857
+ } & {
858
+ readonly svgReady: boolean;
859
+ readonly paintInert: boolean;
860
+ readonly displayPhase: import("@jbrowse/render-core/displayPhase").DisplayPhase;
861
+ } & {
862
+ setLoadedRegion(displayedRegionIndex: number, region: import("@jbrowse/core/util").Region, fetchKey?: string): void;
863
+ dropLoadedRegion(displayedRegionIndex: number): void;
864
+ clearDisplaySpecificData(): void;
865
+ } & {
866
+ clearAllRpcData(): void;
867
+ reload(): void;
868
+ } & {
869
+ fetchNeeded(_needed: IndexedRegion[]): void;
870
+ } & {
871
+ fetchRegions(needed: IndexedRegion[], work: (ctx: import("@jbrowse/display-kit/regionCommit").RegionFetchContext) => Promise<void>): Promise<void>;
872
+ } & {
873
+ afterAttach(): void;
874
+ } & {
875
+ /** every `fetchNeeded` call, as the region list it was handed */
876
+ fetchLog: IndexedRegion[][];
877
+ loadedData: Map<number, string>;
878
+ /**
879
+ * What `regionFetchKey` answers. A volatile, not a `control` knob, and
880
+ * that is the point: a real display's key reads view state, so the
881
+ * autorun re-runs when it moves. A plain closure value would be memoized
882
+ * by the computed and never invalidate.
883
+ */
884
+ fetchKey: string;
885
+ } & {
886
+ readonly gateEnabled: boolean;
887
+ readonly densityTooLarge: boolean;
888
+ readonly regionFetchKey: string;
889
+ regionHasData(_displayedRegionIndex: number): boolean;
890
+ } & {
891
+ setFetchKey(key: string): void;
892
+ setLoaded(displayedRegionIndex: number, value: string): void;
893
+ clearDisplaySpecificData(): void;
894
+ } & {
895
+ fetchNeeded(needed: IndexedRegion[]): Promise<void>;
896
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<Omit<Omit<Omit<{
897
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
898
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
899
+ }, never>, never> & Omit<Omit<Omit<{}, never>, never>, never>, "configuration" | "type"> & {
900
+ type: import("@jbrowse/mobx-state-tree").ILiteralType<"PerRegionTestDisplay">;
901
+ configuration: import("@jbrowse/core/configuration/configurationSchema").IConfigurationReference<AnyConfigurationSchemaType>;
902
+ }, {
903
+ error: unknown;
904
+ statusMessage: string | undefined;
905
+ statusProgress: number | undefined;
906
+ } & {
907
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
908
+ } & {
909
+ readonly RenderingComponent: React.FC<{
910
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
911
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
912
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
913
+ }> & {
914
+ error: unknown;
915
+ statusMessage: string | undefined;
916
+ statusProgress: number | undefined;
917
+ } & {
918
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
919
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
920
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
921
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
922
+ }, {
923
+ error: unknown;
924
+ statusMessage: string | undefined;
925
+ statusProgress: number | undefined;
926
+ } & {
927
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
928
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
929
+ onHorizontalScroll?: (distance: number) => void;
930
+ blockState?: Record<string, unknown>;
931
+ }>;
932
+ readonly DisplayBlurb: React.FC<{
933
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
934
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
935
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
936
+ }> & {
937
+ error: unknown;
938
+ statusMessage: string | undefined;
939
+ statusProgress: number | undefined;
940
+ } & {
941
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
942
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
943
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
944
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
945
+ }, {
946
+ error: unknown;
947
+ statusMessage: string | undefined;
948
+ statusProgress: number | undefined;
949
+ } & {
950
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
951
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
952
+ }> | null;
953
+ readonly adapterConfig: Record<string, unknown>;
954
+ readonly isMinimized: boolean;
955
+ readonly hoveredFeature: unknown;
956
+ readonly featureNoun: string;
957
+ readonly featureWidgetType: {
958
+ type: string;
959
+ id: string;
960
+ };
961
+ } & {
962
+ renderingProps(): {
963
+ displayModel: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
964
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
965
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
966
+ }> & {
967
+ error: unknown;
968
+ statusMessage: string | undefined;
969
+ statusProgress: number | undefined;
970
+ } & {
971
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
972
+ } & {
973
+ readonly RenderingComponent: React.FC<{
974
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
975
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
976
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
977
+ }> & {
978
+ error: unknown;
979
+ statusMessage: string | undefined;
980
+ statusProgress: number | undefined;
981
+ } & {
982
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
983
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
984
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
985
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
986
+ }, {
987
+ error: unknown;
988
+ statusMessage: string | undefined;
989
+ statusProgress: number | undefined;
990
+ } & {
991
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
992
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
993
+ onHorizontalScroll?: (distance: number) => void;
994
+ blockState?: Record<string, unknown>;
995
+ }>;
996
+ readonly DisplayBlurb: React.FC<{
997
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
998
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
999
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1000
+ }> & {
1001
+ error: unknown;
1002
+ statusMessage: string | undefined;
1003
+ statusProgress: number | undefined;
1004
+ } & {
1005
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1006
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1007
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1008
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1009
+ }, {
1010
+ error: unknown;
1011
+ statusMessage: string | undefined;
1012
+ statusProgress: number | undefined;
1013
+ } & {
1014
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1015
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1016
+ }> | null;
1017
+ readonly adapterConfig: Record<string, unknown>;
1018
+ readonly isMinimized: boolean;
1019
+ readonly hoveredFeature: unknown;
1020
+ readonly featureNoun: string;
1021
+ readonly featureWidgetType: {
1022
+ type: string;
1023
+ id: string;
1024
+ };
1025
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1026
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1027
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1028
+ }, {
1029
+ error: unknown;
1030
+ statusMessage: string | undefined;
1031
+ statusProgress: number | undefined;
1032
+ } & {
1033
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1034
+ } & {
1035
+ readonly RenderingComponent: React.FC<{
1036
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1037
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1038
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1039
+ }> & {
1040
+ error: unknown;
1041
+ statusMessage: string | undefined;
1042
+ statusProgress: number | undefined;
1043
+ } & {
1044
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1045
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1046
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1047
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1048
+ }, {
1049
+ error: unknown;
1050
+ statusMessage: string | undefined;
1051
+ statusProgress: number | undefined;
1052
+ } & {
1053
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1054
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1055
+ onHorizontalScroll?: (distance: number) => void;
1056
+ blockState?: Record<string, unknown>;
1057
+ }>;
1058
+ readonly DisplayBlurb: React.FC<{
1059
+ model: import("@jbrowse/mobx-state-tree").ModelInstanceTypeProps<{
1060
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1061
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1062
+ }> & {
1063
+ error: unknown;
1064
+ statusMessage: string | undefined;
1065
+ statusProgress: number | undefined;
1066
+ } & {
1067
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1068
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1069
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1070
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1071
+ }, {
1072
+ error: unknown;
1073
+ statusMessage: string | undefined;
1074
+ statusProgress: number | undefined;
1075
+ } & {
1076
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1077
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1078
+ }> | null;
1079
+ readonly adapterConfig: Record<string, unknown>;
1080
+ readonly isMinimized: boolean;
1081
+ readonly hoveredFeature: unknown;
1082
+ readonly featureNoun: string;
1083
+ readonly featureWidgetType: {
1084
+ type: string;
1085
+ id: string;
1086
+ };
1087
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1088
+ };
1089
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
1090
+ } & {
1091
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
1092
+ setError(error?: unknown): void;
1093
+ clearHoveredFeature(): void;
1094
+ reload(): void;
1095
+ applyDisplaySettings(settings: Record<string, unknown>, options?: {
1096
+ allowSetters?: boolean;
1097
+ }): {
1098
+ applied: string[];
1099
+ unapplied: string[];
1100
+ failed: {
1101
+ key: string;
1102
+ error: string;
1103
+ }[];
1104
+ };
1105
+ } & {
1106
+ scrollTop: number;
1107
+ } & {
1108
+ readonly height: number;
1109
+ readonly resizing: boolean;
1110
+ readonly scrollableHeight: number;
1111
+ } & {
1112
+ setScrollTop(scrollTop: number): void;
1113
+ setHeight(displayHeight: number): number;
1114
+ resizeHeight(distance: number): number;
1115
+ } & {
1116
+ expandToContentHeight(): number;
1117
+ afterAttach(): void;
1118
+ } & {
1119
+ forceLoadTrack: boolean;
1120
+ byteEstimate: import("@jbrowse/display-kit/regionTooLargeUtils").ByteEstimate | undefined;
1121
+ gateMeasuredViewportKey: string | undefined;
1122
+ } & {
1123
+ readonly gateEnabled: boolean;
1124
+ readonly byteGateAdapterConfig: Record<string, unknown>;
1125
+ readonly configuredFetchSizeLimit: number | undefined;
1126
+ readonly densityTooLarge: boolean;
1127
+ readonly byteGateAdapterPath: string[];
1128
+ readonly adapterFetchSizeLimit: number | undefined;
1129
+ readonly configForceLoad: boolean;
1130
+ readonly gateViewport: import("@jbrowse/display-kit/regionTooLargeUtils").GateViewport | undefined;
1131
+ } & {
1132
+ readonly byteGateAdapterKey: string;
1133
+ readonly aboveForceLoadFloor: boolean;
1134
+ readonly gateExempt: boolean;
1135
+ readonly estimatedFetchBytes: number | undefined;
1136
+ readonly gateMeasurementStale: boolean;
1137
+ } & {
1138
+ readonly gateByteLimit: number;
1139
+ readonly gateActive: boolean;
1140
+ } & {
1141
+ readonly densityGateActive: boolean;
1142
+ resolvedByteLimit(): number | undefined;
1143
+ gateFetchState(): import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState;
1144
+ } & {
1145
+ readonly tooLargeStatus: import("@jbrowse/display-kit/regionTooLargeUtils").RegionTooLargeStatus;
1146
+ } & {
1147
+ readonly regionTooLarge: boolean;
1148
+ readonly regionTooLargeReason: string;
1149
+ readonly zoomCanReleaseGate: boolean;
1150
+ } & {
1151
+ readonly gateSkipsMeasuredViewport: boolean;
1152
+ } & {
1153
+ clearByteEstimate(): void;
1154
+ setForceLoadTrack(flag: boolean): void;
1155
+ } & {
1156
+ commitFetchBytes(perRegionBytes: (number | undefined)[], issued: import("@jbrowse/display-kit/regionTooLargeUtils").GateFetchState, partial?: boolean): void;
1157
+ } & {
1158
+ forceLoad(): void;
1159
+ } & {
1160
+ afterAttach(): void;
1161
+ } & {
1162
+ canvasDrawn: boolean;
1163
+ currentRenderingBackend: unknown;
1164
+ renderTick: number;
1165
+ autorunsInstalled: boolean;
1166
+ renderError: unknown;
1167
+ } & {
1168
+ readonly canRender: boolean;
1169
+ readonly rendersCanvas: boolean;
1170
+ readonly paintInert: boolean;
1171
+ } & {
1172
+ readonly painted: boolean;
1173
+ } & {
1174
+ markCanvasDrawn(): void;
1175
+ resetCanvasDrawn(): void;
1176
+ stopRenderingBackend(): void;
1177
+ renderNow(): void;
1178
+ setRenderError(error: unknown): void;
1179
+ } & {
1180
+ attachRenderingBackend<B>(backend: B, setup: () => import("@jbrowse/render-core/RenderLifecycleMixin").RenderingBackendCallbacks<B>): void;
1181
+ } & {
1182
+ activeStopToken: import("@jbrowse/core/util").StopToken | undefined;
1183
+ fetchGeneration: number;
1184
+ reloadCounter: number;
1185
+ statusWindow: import("@jbrowse/core/util").StatusWindow;
1186
+ error: unknown;
1187
+ statusMessage: string | undefined;
1188
+ statusProgress: number | undefined;
1189
+ fetchCanceled: boolean;
1190
+ } & {
1191
+ fetchRotation: {
1192
+ begin(): import("@jbrowse/core/util").ActiveFetch;
1193
+ cancel: () => void;
1194
+ dispose(): void;
1195
+ };
1196
+ } & {
1197
+ readonly isLoading: boolean;
1198
+ } & {
1199
+ readonly isLoadingOrCanceled: boolean;
1200
+ readonly fetchInert: boolean;
1201
+ readonly awaitingPrerequisite: boolean;
1202
+ readonly awaitingDependentData: boolean;
1203
+ readonly rpcPropsCacheKey: string;
1204
+ } & {
1205
+ setError(error?: unknown): void;
1206
+ setStatusMessage(status?: import("@jbrowse/core/util").RpcStatus): void;
1207
+ } & {
1208
+ stopActiveFetch(): void;
1209
+ openStatusStream(isCurrent: () => boolean): import("@jbrowse/core/util").StatusStream;
1210
+ } & {
1211
+ cancelFetch(): void;
1212
+ cancelFetchByUser(): void;
1213
+ reload(): void;
1214
+ beforeDestroy(): void;
1215
+ beginFetch(stopToken: import("@jbrowse/core/util").StopToken): void;
1216
+ endFetch(current: boolean): void;
1217
+ } & {
1218
+ runFetch: (work: (ctx: import("@jbrowse/display-kit/FetchMixin").FetchContext) => Promise<void>) => Promise<void>;
1219
+ } & {
1220
+ loadedRegions: import("mobx").ObservableMap<number, import("@jbrowse/display-kit/regionCommit").LoadedRegion>;
1221
+ } & {
1222
+ readonly host: import("@jbrowse/display-kit/regionHost").RegionHost;
1223
+ readonly canvasWidthPx: number;
1224
+ readonly canRender: boolean;
1225
+ readonly rendersCanvas: boolean;
1226
+ readonly viewportWithinLoadedData: boolean;
1227
+ readonly viewportEmpty: boolean;
1228
+ readonly fetchSuspended: boolean;
1229
+ readonly layoutReady: boolean;
1230
+ readonly regionFetchKey: string;
1231
+ regionHasData(_displayedRegionIndex: number): boolean;
1232
+ readonly dataSuperseded: boolean;
1233
+ readonly renderBlocks: import("@jbrowse/render-core/renderBlock").RenderBlock[];
1234
+ } & {
1235
+ isCacheValid(displayedRegionIndex: number): boolean;
1236
+ } & {
1237
+ readonly dataCurrent: boolean;
1238
+ readonly loadedAssembly: import("@jbrowse/core/assemblyManager/assembly").Assembly | undefined;
1239
+ } & {
1240
+ readonly svgReady: boolean;
1241
+ readonly paintInert: boolean;
1242
+ readonly displayPhase: import("@jbrowse/render-core/displayPhase").DisplayPhase;
1243
+ } & {
1244
+ setLoadedRegion(displayedRegionIndex: number, region: import("@jbrowse/core/util").Region, fetchKey?: string): void;
1245
+ dropLoadedRegion(displayedRegionIndex: number): void;
1246
+ clearDisplaySpecificData(): void;
1247
+ } & {
1248
+ clearAllRpcData(): void;
1249
+ reload(): void;
1250
+ } & {
1251
+ fetchNeeded(_needed: IndexedRegion[]): void;
1252
+ } & {
1253
+ fetchRegions(needed: IndexedRegion[], work: (ctx: import("@jbrowse/display-kit/regionCommit").RegionFetchContext) => Promise<void>): Promise<void>;
1254
+ } & {
1255
+ afterAttach(): void;
1256
+ } & {
1257
+ /** every `fetchNeeded` call, as the region list it was handed */
1258
+ fetchLog: IndexedRegion[][];
1259
+ loadedData: Map<number, string>;
1260
+ /**
1261
+ * What `regionFetchKey` answers. A volatile, not a `control` knob, and
1262
+ * that is the point: a real display's key reads view state, so the
1263
+ * autorun re-runs when it moves. A plain closure value would be memoized
1264
+ * by the computed and never invalidate.
1265
+ */
1266
+ fetchKey: string;
1267
+ } & {
1268
+ readonly gateEnabled: boolean;
1269
+ readonly densityTooLarge: boolean;
1270
+ readonly regionFetchKey: string;
1271
+ regionHasData(_displayedRegionIndex: number): boolean;
1272
+ } & {
1273
+ setFetchKey(key: string): void;
1274
+ setLoaded(displayedRegionIndex: number, value: string): void;
1275
+ clearDisplaySpecificData(): void;
1276
+ } & {
1277
+ fetchNeeded(needed: IndexedRegion[]): Promise<void>;
1278
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1279
+ mockRpcCall: jest.Mock<any, any, any>;
1280
+ };
1281
+ mockRpcCall: jest.Mock<any, any, any>;
1282
+ pluginManager: import("@jbrowse/core/PluginManager").default;
1283
+ trackConfig: any;
1284
+ control: PerRegionTestControl;
1285
+ };
1286
+ export {};