@jbrowse/plugin-linear-genome-view 4.3.0 → 5.0.0-beta.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (357) hide show
  1. package/esm/FeatureTrack/configSchema.d.ts +104 -65
  2. package/esm/FeatureTrack/configSchema.js +47 -1
  3. package/esm/FeatureTrack/index.js +1 -1
  4. package/esm/LaunchLinearGenomeView/index.d.ts +14 -0
  5. package/esm/LaunchLinearGenomeView/index.js +6 -12
  6. package/esm/LinearGenomeView/afterAttach.d.ts +20 -2
  7. package/esm/LinearGenomeView/afterAttach.js +250 -121
  8. package/esm/LinearGenomeView/components/CenterLine.d.ts +1 -1
  9. package/esm/LinearGenomeView/components/CenterLine.js +16 -7
  10. package/esm/LinearGenomeView/components/ConnectedHoverHighlight.d.ts +7 -0
  11. package/esm/LinearGenomeView/components/ConnectedHoverHighlight.js +22 -0
  12. package/esm/LinearGenomeView/components/CrisprGuidePanel.d.ts +3 -0
  13. package/esm/LinearGenomeView/components/CrisprGuidePanel.js +144 -0
  14. package/esm/LinearGenomeView/components/Cytobands.d.ts +6 -6
  15. package/esm/LinearGenomeView/components/Cytobands.js +76 -53
  16. package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +7 -3
  17. package/esm/LinearGenomeView/components/ExportSvgDialog.js +11 -67
  18. package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +5 -9
  19. package/esm/LinearGenomeView/components/GetSequenceDialog.js +84 -88
  20. package/esm/LinearGenomeView/components/Gridlines.d.ts +1 -1
  21. package/esm/LinearGenomeView/components/Gridlines.js +29 -58
  22. package/esm/LinearGenomeView/components/Header.d.ts +1 -1
  23. package/esm/LinearGenomeView/components/Header.js +32 -16
  24. package/esm/LinearGenomeView/components/HeaderClearHighlightButton.d.ts +21 -0
  25. package/esm/LinearGenomeView/components/HeaderClearHighlightButton.js +35 -0
  26. package/esm/LinearGenomeView/components/HeaderPanControls.d.ts +3 -2
  27. package/esm/LinearGenomeView/components/HeaderPanControls.js +16 -7
  28. package/esm/LinearGenomeView/components/HeaderRegionWidth.d.ts +1 -1
  29. package/esm/LinearGenomeView/components/HeaderRegionWidth.js +9 -6
  30. package/esm/LinearGenomeView/components/HeaderSearchBoxRow.d.ts +6 -0
  31. package/esm/LinearGenomeView/components/HeaderSearchBoxRow.js +27 -0
  32. package/esm/LinearGenomeView/components/HeaderSearchBoxes.d.ts +5 -0
  33. package/esm/LinearGenomeView/components/HeaderSearchBoxes.js +28 -0
  34. package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.d.ts +3 -2
  35. package/esm/LinearGenomeView/components/HeaderTrackSelectorButton.js +11 -4
  36. package/esm/LinearGenomeView/components/HeaderZoomControls.d.ts +3 -2
  37. package/esm/LinearGenomeView/components/HeaderZoomControls.js +67 -51
  38. package/esm/LinearGenomeView/components/Highlight.d.ts +1 -1
  39. package/esm/LinearGenomeView/components/Highlight.js +19 -23
  40. package/esm/LinearGenomeView/components/HighlightBand.d.ts +3 -2
  41. package/esm/LinearGenomeView/components/HighlightBand.js +25 -8
  42. package/esm/LinearGenomeView/components/HighlightChip.d.ts +9 -0
  43. package/esm/LinearGenomeView/components/HighlightChip.js +15 -0
  44. package/esm/LinearGenomeView/components/HoverPositionHighlight.d.ts +12 -0
  45. package/esm/LinearGenomeView/components/HoverPositionHighlight.js +25 -0
  46. package/esm/LinearGenomeView/components/ImportForm.d.ts +3 -4
  47. package/esm/LinearGenomeView/components/ImportForm.js +95 -61
  48. package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +1 -1
  49. package/esm/LinearGenomeView/components/LinearGenomeView.js +6 -5
  50. package/esm/LinearGenomeView/components/LinearGenomeViewContainer.d.ts +1 -1
  51. package/esm/LinearGenomeView/components/LinearGenomeViewContainer.js +89 -30
  52. package/esm/LinearGenomeView/components/MiniControls.d.ts +1 -1
  53. package/esm/LinearGenomeView/components/MiniControls.js +13 -10
  54. package/esm/LinearGenomeView/components/MotifListPanel.d.ts +3 -0
  55. package/esm/LinearGenomeView/components/MotifListPanel.js +59 -0
  56. package/esm/LinearGenomeView/components/NavigationAnnouncer.d.ts +32 -0
  57. package/esm/LinearGenomeView/components/NavigationAnnouncer.js +51 -0
  58. package/esm/LinearGenomeView/components/NoTracksActiveButton.d.ts +1 -1
  59. package/esm/LinearGenomeView/components/NoTracksActiveButton.js +1 -1
  60. package/esm/LinearGenomeView/components/OverviewHighlight.d.ts +2 -4
  61. package/esm/LinearGenomeView/components/OverviewHighlight.js +23 -44
  62. package/esm/LinearGenomeView/components/OverviewHighlightBand.d.ts +9 -0
  63. package/esm/LinearGenomeView/components/OverviewHighlightBand.js +26 -0
  64. package/esm/LinearGenomeView/components/OverviewRubberband.d.ts +3 -3
  65. package/esm/LinearGenomeView/components/OverviewRubberband.js +44 -57
  66. package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.d.ts +4 -5
  67. package/esm/LinearGenomeView/components/OverviewRubberbandHoverTooltip.js +13 -20
  68. package/esm/LinearGenomeView/components/OverviewScalebar.d.ts +3 -2
  69. package/esm/LinearGenomeView/components/OverviewScalebar.js +84 -79
  70. package/esm/LinearGenomeView/components/OverviewScalebarPolygon.d.ts +19 -5
  71. package/esm/LinearGenomeView/components/OverviewScalebarPolygon.js +55 -32
  72. package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.d.ts +4 -5
  73. package/esm/LinearGenomeView/components/OverviewScalebarTickLabels.js +16 -18
  74. package/esm/LinearGenomeView/components/PaddingBlocks.d.ts +7 -0
  75. package/esm/LinearGenomeView/components/PaddingBlocks.js +61 -0
  76. package/esm/LinearGenomeView/components/RangeSelectOverlay.d.ts +9 -0
  77. package/esm/LinearGenomeView/components/RangeSelectOverlay.js +20 -0
  78. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.d.ts +2 -3
  79. package/esm/LinearGenomeView/components/RegionWidthEditorDialog.js +19 -26
  80. package/esm/LinearGenomeView/components/Rubberband.d.ts +1 -1
  81. package/esm/LinearGenomeView/components/Rubberband.js +13 -16
  82. package/esm/LinearGenomeView/components/SVGHighlightBand.d.ts +10 -0
  83. package/esm/LinearGenomeView/components/SVGHighlightBand.js +9 -0
  84. package/esm/LinearGenomeView/components/Scalebar.d.ts +2 -2
  85. package/esm/LinearGenomeView/components/Scalebar.js +16 -21
  86. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.d.ts +1 -1
  87. package/esm/LinearGenomeView/components/ScalebarCoordinateLabels.js +54 -35
  88. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.d.ts +1 -1
  89. package/esm/LinearGenomeView/components/ScalebarRefNameLabels.js +142 -126
  90. package/esm/LinearGenomeView/components/SearchBox.d.ts +22 -2
  91. package/esm/LinearGenomeView/components/SearchBox.js +58 -66
  92. package/esm/LinearGenomeView/components/SearchPanelForm.d.ts +9 -0
  93. package/esm/LinearGenomeView/components/SearchPanelForm.js +18 -0
  94. package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +3 -3
  95. package/esm/LinearGenomeView/components/SearchResultsDialog.js +5 -7
  96. package/esm/LinearGenomeView/components/SearchResultsTable.d.ts +4 -3
  97. package/esm/LinearGenomeView/components/SearchResultsTable.js +45 -53
  98. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.d.ts +5 -0
  99. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlight.js +37 -0
  100. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.d.ts +2 -0
  101. package/esm/LinearGenomeView/components/SequenceFeatureHoverHighlightExtension.js +5 -0
  102. package/esm/LinearGenomeView/components/SequencePatternPanel.d.ts +3 -0
  103. package/esm/LinearGenomeView/components/SequencePatternPanel.js +42 -0
  104. package/esm/LinearGenomeView/components/SequenceSearchDialog.d.ts +2 -2
  105. package/esm/LinearGenomeView/components/SequenceSearchDialog.js +31 -53
  106. package/esm/LinearGenomeView/components/StrandCheckboxes.d.ts +8 -0
  107. package/esm/LinearGenomeView/components/StrandCheckboxes.js +13 -0
  108. package/esm/LinearGenomeView/components/TrackContainer.d.ts +1 -1
  109. package/esm/LinearGenomeView/components/TrackContainer.js +83 -39
  110. package/esm/LinearGenomeView/components/TrackLabel.d.ts +2 -3
  111. package/esm/LinearGenomeView/components/TrackLabel.js +11 -24
  112. package/esm/LinearGenomeView/components/TrackLabelButtons.d.ts +7 -0
  113. package/esm/LinearGenomeView/components/TrackLabelButtons.js +33 -0
  114. package/esm/LinearGenomeView/components/TrackLabelDragHandle.d.ts +2 -5
  115. package/esm/LinearGenomeView/components/TrackLabelDragHandle.js +6 -2
  116. package/esm/LinearGenomeView/components/TrackLabelMenu.d.ts +1 -1
  117. package/esm/LinearGenomeView/components/TrackLabelMenu.js +32 -85
  118. package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.d.ts +22 -0
  119. package/esm/LinearGenomeView/components/TrackLabelRefNameWarning.js +46 -0
  120. package/esm/LinearGenomeView/components/TrackRenderingContainer.d.ts +1 -1
  121. package/esm/LinearGenomeView/components/TrackRenderingContainer.js +72 -18
  122. package/esm/LinearGenomeView/components/TracksContainer.d.ts +1 -1
  123. package/esm/LinearGenomeView/components/TracksContainer.js +65 -32
  124. package/esm/LinearGenomeView/components/VerticalGuide.d.ts +1 -1
  125. package/esm/LinearGenomeView/components/VerticalGuide.js +6 -13
  126. package/esm/LinearGenomeView/components/ZoomButton.d.ts +7 -0
  127. package/esm/LinearGenomeView/components/ZoomButton.js +27 -0
  128. package/esm/LinearGenomeView/components/ZoomTransform.d.ts +9 -0
  129. package/esm/LinearGenomeView/components/ZoomTransform.js +37 -0
  130. package/esm/LinearGenomeView/components/defaultMotifs.d.ts +1 -0
  131. package/esm/LinearGenomeView/components/defaultMotifs.js +22 -0
  132. package/esm/LinearGenomeView/components/fetchSequence.d.ts +7 -8
  133. package/esm/LinearGenomeView/components/fetchSequence.js +17 -9
  134. package/esm/LinearGenomeView/components/recentLocationsMenu.d.ts +15 -0
  135. package/esm/LinearGenomeView/components/recentLocationsMenu.js +36 -0
  136. package/esm/LinearGenomeView/components/searchModes.d.ts +13 -0
  137. package/esm/LinearGenomeView/components/searchModes.js +22 -0
  138. package/esm/LinearGenomeView/components/trackLabelMenuItems.d.ts +7 -0
  139. package/esm/LinearGenomeView/components/trackLabelMenuItems.js +67 -0
  140. package/esm/LinearGenomeView/components/useRangeSelect.d.ts +11 -66
  141. package/esm/LinearGenomeView/components/useRangeSelect.js +82 -91
  142. package/esm/LinearGenomeView/components/useSearchBoxPrefs.d.ts +26 -0
  143. package/esm/LinearGenomeView/components/useSearchBoxPrefs.js +58 -0
  144. package/esm/LinearGenomeView/components/useSideScroll.d.ts +1 -1
  145. package/esm/LinearGenomeView/components/useSideScroll.js +87 -19
  146. package/esm/LinearGenomeView/components/util.d.ts +20 -6
  147. package/esm/LinearGenomeView/components/util.js +27 -6
  148. package/esm/LinearGenomeView/consts.d.ts +7 -2
  149. package/esm/LinearGenomeView/consts.js +18 -2
  150. package/esm/LinearGenomeView/flyTo.d.ts +38 -0
  151. package/esm/LinearGenomeView/flyTo.js +135 -0
  152. package/esm/LinearGenomeView/headerFit.d.ts +27 -0
  153. package/esm/LinearGenomeView/headerFit.js +59 -0
  154. package/esm/LinearGenomeView/index.d.ts +32 -2
  155. package/esm/LinearGenomeView/index.js +16 -6
  156. package/esm/LinearGenomeView/initKeys.d.ts +12 -0
  157. package/esm/LinearGenomeView/initKeys.js +68 -0
  158. package/esm/LinearGenomeView/keyboardHandler.d.ts +7 -0
  159. package/esm/LinearGenomeView/keyboardHandler.js +10 -0
  160. package/esm/LinearGenomeView/launchKeys.d.ts +2 -0
  161. package/esm/LinearGenomeView/launchKeys.js +23 -0
  162. package/esm/LinearGenomeView/lazyDialogs.d.ts +7 -11
  163. package/esm/LinearGenomeView/lazyDialogs.js +3 -3
  164. package/esm/LinearGenomeView/linkedViewSync.d.ts +20 -0
  165. package/esm/LinearGenomeView/linkedViewSync.js +58 -0
  166. package/esm/LinearGenomeView/menuItems.d.ts +27 -2
  167. package/esm/LinearGenomeView/menuItems.js +137 -101
  168. package/esm/LinearGenomeView/model.d.ts +3238 -136
  169. package/esm/LinearGenomeView/model.js +2425 -528
  170. package/esm/LinearGenomeView/sharedScaleContainer.d.ts +18 -0
  171. package/esm/LinearGenomeView/sharedScaleContainer.js +17 -0
  172. package/esm/LinearGenomeView/showRegionsWithUndo.d.ts +35 -0
  173. package/esm/LinearGenomeView/showRegionsWithUndo.js +44 -0
  174. package/esm/LinearGenomeView/stickyChrome.d.ts +19 -0
  175. package/esm/LinearGenomeView/stickyChrome.js +30 -0
  176. package/esm/LinearGenomeView/svgcomponents/SVGGridlines.d.ts +1 -1
  177. package/esm/LinearGenomeView/svgcomponents/SVGGridlines.js +15 -16
  178. package/esm/LinearGenomeView/svgcomponents/SVGHeader.d.ts +2 -3
  179. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +45 -33
  180. package/esm/LinearGenomeView/svgcomponents/SVGHighlights.d.ts +5 -0
  181. package/esm/LinearGenomeView/svgcomponents/SVGHighlights.js +26 -0
  182. package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.d.ts +5 -0
  183. package/esm/LinearGenomeView/svgcomponents/SVGHighlightsOverlay.js +13 -0
  184. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.d.ts +1 -3
  185. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +77 -41
  186. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.d.ts +1 -1
  187. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +23 -3
  188. package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.d.ts +8 -0
  189. package/esm/LinearGenomeView/svgcomponents/SVGRowHeader.js +37 -0
  190. package/esm/LinearGenomeView/svgcomponents/SVGRuler.d.ts +3 -3
  191. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +64 -36
  192. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.d.ts +1 -1
  193. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js +7 -5
  194. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.d.ts +5 -3
  195. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js +43 -7
  196. package/esm/LinearGenomeView/svgcomponents/SVGTracks.d.ts +8 -14
  197. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +16 -21
  198. package/esm/LinearGenomeView/svgcomponents/SVGView.d.ts +18 -0
  199. package/esm/LinearGenomeView/svgcomponents/SVGView.js +13 -0
  200. package/esm/LinearGenomeView/svgcomponents/figureContract.d.ts +45 -0
  201. package/esm/LinearGenomeView/svgcomponents/figureContract.js +130 -0
  202. package/esm/LinearGenomeView/svgcomponents/renderViewTracks.d.ts +76 -0
  203. package/esm/LinearGenomeView/svgcomponents/renderViewTracks.js +66 -0
  204. package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.d.ts +70 -0
  205. package/esm/LinearGenomeView/svgcomponents/useViewSvgFigure.js +263 -0
  206. package/esm/LinearGenomeView/svgcomponents/util.d.ts +92 -5
  207. package/esm/LinearGenomeView/svgcomponents/util.js +236 -3
  208. package/esm/LinearGenomeView/types.d.ts +17 -31
  209. package/esm/LinearGenomeView/types.js +1 -0
  210. package/esm/LinearGenomeView/util.d.ts +332 -12
  211. package/esm/LinearGenomeView/util.js +606 -62
  212. package/esm/MultiLevelRubberband/MultiLevelRubberband.d.ts +6 -0
  213. package/esm/MultiLevelRubberband/MultiLevelRubberband.js +37 -0
  214. package/esm/MultiLevelRubberband/VerticalGuide.d.ts +6 -0
  215. package/esm/MultiLevelRubberband/VerticalGuide.js +21 -0
  216. package/esm/MultiLevelRubberband/index.d.ts +2 -0
  217. package/esm/MultiLevelRubberband/index.js +1 -0
  218. package/esm/MultiLevelRubberband/types.d.ts +6 -0
  219. package/esm/MultiLevelRubberband/useRangeSelect.d.ts +24 -0
  220. package/esm/MultiLevelRubberband/useRangeSelect.js +136 -0
  221. package/esm/displayKitTests/perRegionTestEnv.d.ts +1286 -0
  222. package/esm/displayKitTests/perRegionTestEnv.js +138 -0
  223. package/esm/index.d.ts +122 -1235
  224. package/esm/index.js +101 -24
  225. package/esm/lazyPluginExports.d.ts +23 -0
  226. package/esm/lazyPluginExports.js +36 -0
  227. package/esm/searchUtils.d.ts +55 -11
  228. package/esm/searchUtils.js +342 -45
  229. package/esm/shared/RubberbandSpan.d.ts +15 -0
  230. package/esm/shared/RubberbandSpan.js +33 -0
  231. package/esm/shared/coordLabels.d.ts +40 -0
  232. package/esm/shared/coordLabels.js +119 -0
  233. package/package.json +18 -19
  234. package/esm/BaseLinearDisplay/SVGLegend.d.ts +0 -6
  235. package/esm/BaseLinearDisplay/SVGLegend.js +0 -17
  236. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.d.ts +0 -2
  237. package/esm/BaseLinearDisplay/calculateSvgLegendWidth.js +0 -11
  238. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +0 -8
  239. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -53
  240. package/esm/BaseLinearDisplay/components/Block.d.ts +0 -14
  241. package/esm/BaseLinearDisplay/components/Block.js +0 -45
  242. package/esm/BaseLinearDisplay/components/BlockErrorMessage.d.ts +0 -7
  243. package/esm/BaseLinearDisplay/components/BlockErrorMessage.js +0 -22
  244. package/esm/BaseLinearDisplay/components/BlockMsg.d.ts +0 -6
  245. package/esm/BaseLinearDisplay/components/BlockMsg.js +0 -26
  246. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.d.ts +0 -9
  247. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/CollapseIntronsDialog.js +0 -42
  248. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.d.ts +0 -11
  249. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/TranscriptTable.js +0 -40
  250. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.d.ts +0 -19
  251. package/esm/BaseLinearDisplay/components/CollapseIntronsDialog/util.js +0 -45
  252. package/esm/BaseLinearDisplay/components/FloatingLabels.d.ts +0 -5
  253. package/esm/BaseLinearDisplay/components/FloatingLabels.js +0 -75
  254. package/esm/BaseLinearDisplay/components/FloatingLegend.d.ts +0 -8
  255. package/esm/BaseLinearDisplay/components/FloatingLegend.js +0 -43
  256. package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +0 -5
  257. package/esm/BaseLinearDisplay/components/LinearBlocks.js +0 -23
  258. package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +0 -5
  259. package/esm/BaseLinearDisplay/components/LoadingOverlay.js +0 -49
  260. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.d.ts +0 -4
  261. package/esm/BaseLinearDisplay/components/MaxHeightReachedIndicator.js +0 -26
  262. package/esm/BaseLinearDisplay/components/MenuPage.d.ts +0 -8
  263. package/esm/BaseLinearDisplay/components/MenuPage.js +0 -24
  264. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +0 -21
  265. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +0 -52
  266. package/esm/BaseLinearDisplay/components/RenderedBlocks.d.ts +0 -12
  267. package/esm/BaseLinearDisplay/components/RenderedBlocks.js +0 -22
  268. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +0 -12
  269. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -18
  270. package/esm/BaseLinearDisplay/components/TooLargeMessage.d.ts +0 -10
  271. package/esm/BaseLinearDisplay/components/TooLargeMessage.js +0 -20
  272. package/esm/BaseLinearDisplay/components/Tooltip.d.ts +0 -13
  273. package/esm/BaseLinearDisplay/components/Tooltip.js +0 -22
  274. package/esm/BaseLinearDisplay/components/types.d.ts +0 -1
  275. package/esm/BaseLinearDisplay/components/util.d.ts +0 -21
  276. package/esm/BaseLinearDisplay/components/util.js +0 -107
  277. package/esm/BaseLinearDisplay/index.d.ts +0 -17
  278. package/esm/BaseLinearDisplay/index.js +0 -13
  279. package/esm/BaseLinearDisplay/model.d.ts +0 -1197
  280. package/esm/BaseLinearDisplay/model.js +0 -432
  281. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +0 -32
  282. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -113
  283. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.d.ts +0 -26
  284. package/esm/BaseLinearDisplay/models/NonBlockCanvasDisplayMixin.js +0 -57
  285. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.d.ts +0 -8
  286. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.js +0 -19
  287. package/esm/BaseLinearDisplay/models/TrackHeightMixin.d.ts +0 -11
  288. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +0 -31
  289. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.d.ts +0 -2
  290. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -29
  291. package/esm/BaseLinearDisplay/models/configSchema.d.ts +0 -29
  292. package/esm/BaseLinearDisplay/models/configSchema.js +0 -33
  293. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +0 -98
  294. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -242
  295. package/esm/BaseLinearDisplay/models/util.d.ts +0 -9
  296. package/esm/BaseLinearDisplay/models/util.js +0 -43
  297. package/esm/BaseLinearDisplay/renderSvg.d.ts +0 -3
  298. package/esm/BaseLinearDisplay/renderSvg.js +0 -63
  299. package/esm/BaseLinearDisplay/types.d.ts +0 -43
  300. package/esm/BaseLinearDisplay/types.js +0 -3
  301. package/esm/BaseLinearDisplay/util.d.ts +0 -16
  302. package/esm/BaseLinearDisplay/util.js +0 -71
  303. package/esm/BasicTrack/configSchema.d.ts +0 -85
  304. package/esm/BasicTrack/configSchema.js +0 -8
  305. package/esm/BasicTrack/index.d.ts +0 -2
  306. package/esm/BasicTrack/index.js +0 -12
  307. package/esm/LinearBareDisplay/configSchema.d.ts +0 -32
  308. package/esm/LinearBareDisplay/configSchema.js +0 -11
  309. package/esm/LinearBareDisplay/index.d.ts +0 -4
  310. package/esm/LinearBareDisplay/index.js +0 -20
  311. package/esm/LinearBareDisplay/model.d.ts +0 -1196
  312. package/esm/LinearBareDisplay/model.js +0 -32
  313. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.d.ts +0 -5
  314. package/esm/LinearBasicDisplay/components/LinearBasicDisplayComponent.js +0 -9
  315. package/esm/LinearBasicDisplay/configSchema.d.ts +0 -32
  316. package/esm/LinearBasicDisplay/configSchema.js +0 -11
  317. package/esm/LinearBasicDisplay/index.d.ts +0 -4
  318. package/esm/LinearBasicDisplay/index.js +0 -20
  319. package/esm/LinearBasicDisplay/model.d.ts +0 -1391
  320. package/esm/LinearBasicDisplay/model.js +0 -158
  321. package/esm/LinearFeatureDisplay/components/AddFiltersDialog.d.ts +0 -9
  322. package/esm/LinearFeatureDisplay/components/AddFiltersDialog.js +0 -58
  323. package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.d.ts +0 -8
  324. package/esm/LinearFeatureDisplay/components/SetMaxHeightDialog.js +0 -26
  325. package/esm/LinearFeatureDisplay/configSchema.d.ts +0 -32
  326. package/esm/LinearFeatureDisplay/configSchema.js +0 -11
  327. package/esm/LinearFeatureDisplay/index.d.ts +0 -3
  328. package/esm/LinearFeatureDisplay/index.js +0 -2
  329. package/esm/LinearFeatureDisplay/model.d.ts +0 -1443
  330. package/esm/LinearFeatureDisplay/model.js +0 -305
  331. package/esm/LinearGenomeView/SVGErrorBox.d.ts +0 -5
  332. package/esm/LinearGenomeView/SVGErrorBox.js +0 -4
  333. package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.d.ts +0 -11
  334. package/esm/LinearGenomeView/components/ImportFormRefNameAutocomplete.js +0 -27
  335. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.d.ts +0 -5
  336. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -13
  337. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.d.ts +0 -3
  338. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -17
  339. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.d.ts +0 -3
  340. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -8
  341. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.d.ts +0 -16
  342. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -101
  343. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.d.ts +0 -10
  344. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -45
  345. package/esm/LinearGenomeView/components/RubberbandSpan.d.ts +0 -15
  346. package/esm/LinearGenomeView/components/RubberbandSpan.js +0 -32
  347. package/esm/LinearGenomeView/components/RubberbandTooltip.d.ts +0 -5
  348. package/esm/LinearGenomeView/components/RubberbandTooltip.js +0 -17
  349. package/esm/LinearGenomeView/components/TrackLabelContainer.d.ts +0 -8
  350. package/esm/LinearGenomeView/components/TrackLabelContainer.js +0 -25
  351. package/esm/LinearGenomeView/components/useWheelScroll.d.ts +0 -7
  352. package/esm/LinearGenomeView/components/useWheelScroll.js +0 -69
  353. package/esm/LinearGenomeView/svgExportUtil.d.ts +0 -9
  354. package/esm/LinearGenomeView/svgExportUtil.js +0 -6
  355. package/esm/LinearGenomeView/svgcomponents/SVGBackground.d.ts +0 -5
  356. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js +0 -7
  357. /package/esm/{BaseLinearDisplay/components → MultiLevelRubberband}/types.js +0 -0
@@ -1,1443 +0,0 @@
1
- import SerializableFilterChain from '@jbrowse/core/pluggableElementTypes/renderers/util/serializableFilterChain';
2
- import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
3
- import type { MenuItem } from '@jbrowse/core/ui';
4
- import type { Feature } from '@jbrowse/core/util';
5
- import type { Instance } from '@jbrowse/mobx-state-tree';
6
- declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
7
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
8
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
9
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
10
- } & {
11
- heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
12
- } & {
13
- userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
14
- userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
15
- } & {
16
- blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
17
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
18
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
19
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
20
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
21
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
22
- }, {
23
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
24
- filled: boolean;
25
- reactElement: React.ReactElement | undefined;
26
- features: Map<string, Feature> | undefined;
27
- layout: any;
28
- blockStatusMessage: string;
29
- error: unknown;
30
- message: string | undefined;
31
- maxHeightReached: boolean;
32
- ReactComponent: ({ model, }: {
33
- model: {
34
- error?: unknown;
35
- reload: () => void;
36
- message?: React.ReactNode;
37
- statusMessage?: string;
38
- reactElement?: React.ReactElement;
39
- isRenderingPending?: boolean;
40
- displayHeight?: number;
41
- };
42
- }) => import("react/jsx-runtime").JSX.Element;
43
- renderProps: any;
44
- renderArgs: Record<string, unknown> | undefined;
45
- isRenderingPending: boolean;
46
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
47
- } & {
48
- doReload(): void;
49
- setStatusMessage(message: string): void;
50
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
51
- setMessage(messageText: string): void;
52
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
53
- setError(error: unknown): void;
54
- reload(): void;
55
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
56
- beforeDestroy(): void;
57
- } & {
58
- readonly statusMessage: any;
59
- readonly displayHeight: number | undefined;
60
- } & {
61
- afterAttach(): void;
62
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
63
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
64
- maxFeatureScreenDensity: {
65
- type: string;
66
- description: string;
67
- defaultValue: number;
68
- };
69
- fetchSizeLimit: {
70
- type: string;
71
- defaultValue: number;
72
- description: string;
73
- };
74
- height: {
75
- type: string;
76
- defaultValue: number;
77
- description: string;
78
- };
79
- mouseover: {
80
- type: string;
81
- description: string;
82
- defaultValue: string;
83
- contextVariable: string[];
84
- };
85
- jexlFilters: {
86
- type: string;
87
- description: string;
88
- defaultValue: never[];
89
- };
90
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
91
- showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
92
- showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
93
- } & {
94
- type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearFeatureDisplay">;
95
- trackShowLabels: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
96
- trackShowDescriptions: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
97
- trackDisplayMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
98
- trackMaxHeight: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
99
- configuration: AnyConfigurationSchemaType;
100
- jexlFiltersSetting: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").ISimpleType<string>>>;
101
- }, {
102
- rendererTypeName: string;
103
- error: unknown;
104
- statusMessage: string | undefined;
105
- } & {
106
- readonly RenderingComponent: React.FC<{
107
- model: {
108
- id: string;
109
- type: string;
110
- rpcDriverName: string | undefined;
111
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
112
- rendererTypeName: string;
113
- error: unknown;
114
- statusMessage: string | undefined;
115
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
116
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
117
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
118
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
119
- }, {
120
- rendererTypeName: string;
121
- error: unknown;
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- statusMessage: string | undefined;
123
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
124
- onHorizontalScroll?: () => void;
125
- blockState?: Record<string, any>;
126
- }>;
127
- readonly DisplayBlurb: React.FC<{
128
- model: {
129
- id: string;
130
- type: string;
131
- rpcDriverName: string | undefined;
132
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
133
- rendererTypeName: string;
134
- error: unknown;
135
- statusMessage: string | undefined;
136
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
137
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
138
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
139
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
140
- }, {
141
- rendererTypeName: string;
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- error: unknown;
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- statusMessage: string | undefined;
144
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
145
- }> | null;
146
- readonly adapterConfig: any;
147
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
148
- readonly isMinimized: boolean;
149
- readonly parentDisplay: any;
150
- readonly effectiveRpcDriverName: any;
151
- } & {
152
- renderProps(): any;
153
- renderingProps(): {
154
- displayModel: {
155
- id: string;
156
- type: string;
157
- rpcDriverName: string | undefined;
158
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
159
- rendererTypeName: string;
160
- error: unknown;
161
- statusMessage: string | undefined;
162
- } & {
163
- readonly RenderingComponent: React.FC<{
164
- model: {
165
- id: string;
166
- type: string;
167
- rpcDriverName: string | undefined;
168
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
169
- rendererTypeName: string;
170
- error: unknown;
171
- statusMessage: string | undefined;
172
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
173
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
174
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
175
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
176
- }, {
177
- rendererTypeName: string;
178
- error: unknown;
179
- statusMessage: string | undefined;
180
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
181
- onHorizontalScroll?: () => void;
182
- blockState?: Record<string, any>;
183
- }>;
184
- readonly DisplayBlurb: React.FC<{
185
- model: {
186
- id: string;
187
- type: string;
188
- rpcDriverName: string | undefined;
189
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
190
- rendererTypeName: string;
191
- error: unknown;
192
- statusMessage: string | undefined;
193
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
194
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
195
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
196
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
197
- }, {
198
- rendererTypeName: string;
199
- error: unknown;
200
- statusMessage: string | undefined;
201
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
202
- }> | null;
203
- readonly adapterConfig: any;
204
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
205
- readonly isMinimized: boolean;
206
- readonly parentDisplay: any;
207
- readonly effectiveRpcDriverName: any;
208
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
209
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
210
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
211
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
212
- }, {
213
- rendererTypeName: string;
214
- error: unknown;
215
- statusMessage: string | undefined;
216
- } & {
217
- readonly RenderingComponent: React.FC<{
218
- model: {
219
- id: string;
220
- type: string;
221
- rpcDriverName: string | undefined;
222
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
223
- rendererTypeName: string;
224
- error: unknown;
225
- statusMessage: string | undefined;
226
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
227
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
228
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
229
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
230
- }, {
231
- rendererTypeName: string;
232
- error: unknown;
233
- statusMessage: string | undefined;
234
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
235
- onHorizontalScroll?: () => void;
236
- blockState?: Record<string, any>;
237
- }>;
238
- readonly DisplayBlurb: React.FC<{
239
- model: {
240
- id: string;
241
- type: string;
242
- rpcDriverName: string | undefined;
243
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
244
- rendererTypeName: string;
245
- error: unknown;
246
- statusMessage: string | undefined;
247
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
248
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
249
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
250
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
251
- }, {
252
- rendererTypeName: string;
253
- error: unknown;
254
- statusMessage: string | undefined;
255
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
256
- }> | null;
257
- readonly adapterConfig: any;
258
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
259
- readonly isMinimized: boolean;
260
- readonly parentDisplay: any;
261
- readonly effectiveRpcDriverName: any;
262
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
263
- };
264
- readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
265
- readonly DisplayMessageComponent: undefined | React.FC<any>;
266
- trackMenuItems(): MenuItem[];
267
- readonly viewMenuActions: MenuItem[];
268
- regionCannotBeRendered(): null;
269
- } & {
270
- setStatusMessage(arg?: string): void;
271
- setError(error?: unknown): void;
272
- setRpcDriverName(rpcDriverName: string): void;
273
- reload(): void;
274
- } & {
275
- scrollTop: number;
276
- } & {
277
- readonly height: number;
278
- } & {
279
- setScrollTop(scrollTop: number): void;
280
- setHeight(displayHeight: number): number;
281
- resizeHeight(distance: number): number;
282
- } & {
283
- featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
284
- featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
285
- currStatsBpPerPx: number;
286
- } & {
287
- readonly currentBytesRequested: number;
288
- readonly currentFeatureScreenDensity: number;
289
- readonly maxFeatureScreenDensity: any;
290
- readonly featureDensityStatsReady: boolean;
291
- readonly maxAllowableBytes: number;
292
- } & {
293
- afterAttach(): void;
294
- } & {
295
- setCurrStatsBpPerPx(n: number): void;
296
- setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
297
- getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
298
- setFeatureDensityStatsP(arg: any): void;
299
- setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
300
- clearFeatureDensityStats(): void;
301
- } & {
302
- readonly regionTooLarge: boolean;
303
- readonly regionTooLargeReason: string;
304
- } & {
305
- readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
306
- regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
307
- regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
308
- } & {
309
- mouseoverExtraInformation: string | undefined;
310
- featureIdUnderMouse: undefined | string;
311
- subfeatureIdUnderMouse: undefined | string;
312
- contextMenuFeature: undefined | Feature;
313
- } & {
314
- readonly DisplayMessageComponent: undefined | React.FC<any>;
315
- readonly blockType: "staticBlocks" | "dynamicBlocks";
316
- readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
317
- } & {
318
- readonly renderDelay: number;
319
- readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
320
- legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
321
- svgLegendWidth(theme?: import("@mui/material").Theme): number;
322
- readonly selectedFeatureId: string | undefined;
323
- readonly featureWidgetType: {
324
- type: string;
325
- id: string;
326
- };
327
- } & {
328
- readonly showTooltipsEnabled: boolean;
329
- readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
330
- readonly featureUnderMouse: Feature | undefined;
331
- getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
332
- readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
333
- getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
334
- getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
335
- searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
336
- readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
337
- } & {
338
- addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
339
- deleteBlock(key: string): void;
340
- selectFeature(feature: Feature): void;
341
- navToFeature(feature: Feature): void;
342
- clearFeatureSelection(): void;
343
- setFeatureIdUnderMouse(feature?: string): void;
344
- setSubfeatureIdUnderMouse(subfeatureId?: string): void;
345
- setContextMenuFeature(feature?: Feature): void;
346
- setMouseoverExtraInformation(extra?: string): void;
347
- setShowLegend(s: boolean): void;
348
- setShowTooltips(arg: boolean): void;
349
- } & {
350
- reload(): Promise<void>;
351
- } & {
352
- selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
353
- setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
354
- } & {
355
- trackMenuItems(): MenuItem[];
356
- contextMenuItems(): MenuItem[];
357
- renderingProps(): {
358
- displayModel: {
359
- id: string;
360
- type: string;
361
- rpcDriverName: string | undefined;
362
- heightPreConfig: number | undefined;
363
- userBpPerPxLimit: number | undefined;
364
- userByteSizeLimit: number | undefined;
365
- blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
366
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
367
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
368
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
369
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
370
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
371
- }, {
372
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
373
- filled: boolean;
374
- reactElement: React.ReactElement | undefined;
375
- features: Map<string, Feature> | undefined;
376
- layout: any;
377
- blockStatusMessage: string;
378
- error: unknown;
379
- message: string | undefined;
380
- maxHeightReached: boolean;
381
- ReactComponent: ({ model, }: {
382
- model: {
383
- error?: unknown;
384
- reload: () => void;
385
- message?: React.ReactNode;
386
- statusMessage?: string;
387
- reactElement?: React.ReactElement;
388
- isRenderingPending?: boolean;
389
- displayHeight?: number;
390
- };
391
- }) => import("react/jsx-runtime").JSX.Element;
392
- renderProps: any;
393
- renderArgs: Record<string, unknown> | undefined;
394
- isRenderingPending: boolean;
395
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
396
- } & {
397
- doReload(): void;
398
- setStatusMessage(message: string): void;
399
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
400
- setMessage(messageText: string): void;
401
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
402
- setError(error: unknown): void;
403
- reload(): void;
404
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
405
- beforeDestroy(): void;
406
- } & {
407
- readonly statusMessage: any;
408
- readonly displayHeight: number | undefined;
409
- } & {
410
- afterAttach(): void;
411
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
412
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
413
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
414
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
415
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
416
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
417
- }, {
418
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
419
- filled: boolean;
420
- reactElement: React.ReactElement | undefined;
421
- features: Map<string, Feature> | undefined;
422
- layout: any;
423
- blockStatusMessage: string;
424
- error: unknown;
425
- message: string | undefined;
426
- maxHeightReached: boolean;
427
- ReactComponent: ({ model, }: {
428
- model: {
429
- error?: unknown;
430
- reload: () => void;
431
- message?: React.ReactNode;
432
- statusMessage?: string;
433
- reactElement?: React.ReactElement;
434
- isRenderingPending?: boolean;
435
- displayHeight?: number;
436
- };
437
- }) => import("react/jsx-runtime").JSX.Element;
438
- renderProps: any;
439
- renderArgs: Record<string, unknown> | undefined;
440
- isRenderingPending: boolean;
441
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
442
- } & {
443
- doReload(): void;
444
- setStatusMessage(message: string): void;
445
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
446
- setMessage(messageText: string): void;
447
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
448
- setError(error: unknown): void;
449
- reload(): void;
450
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
451
- beforeDestroy(): void;
452
- } & {
453
- readonly statusMessage: any;
454
- readonly displayHeight: number | undefined;
455
- } & {
456
- afterAttach(): void;
457
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
458
- configuration: {
459
- [x: string]: any;
460
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
461
- setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
462
- [x: string]: any;
463
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
464
- setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
465
- [x: string]: any;
466
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
467
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
468
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
469
- maxFeatureScreenDensity: {
470
- type: string;
471
- description: string;
472
- defaultValue: number;
473
- };
474
- fetchSizeLimit: {
475
- type: string;
476
- defaultValue: number;
477
- description: string;
478
- };
479
- height: {
480
- type: string;
481
- defaultValue: number;
482
- description: string;
483
- };
484
- mouseover: {
485
- type: string;
486
- description: string;
487
- defaultValue: string;
488
- contextVariable: string[];
489
- };
490
- jexlFilters: {
491
- type: string;
492
- description: string;
493
- defaultValue: never[];
494
- };
495
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
496
- showLegend: boolean | undefined;
497
- showTooltips: boolean | undefined;
498
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
499
- rendererTypeName: string;
500
- error: unknown;
501
- statusMessage: string | undefined;
502
- } & {
503
- readonly RenderingComponent: React.FC<{
504
- model: {
505
- id: string;
506
- type: string;
507
- rpcDriverName: string | undefined;
508
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
509
- rendererTypeName: string;
510
- error: unknown;
511
- statusMessage: string | undefined;
512
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
513
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
514
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
515
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
516
- }, {
517
- rendererTypeName: string;
518
- error: unknown;
519
- statusMessage: string | undefined;
520
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
521
- onHorizontalScroll?: () => void;
522
- blockState?: Record<string, any>;
523
- }>;
524
- readonly DisplayBlurb: React.FC<{
525
- model: {
526
- id: string;
527
- type: string;
528
- rpcDriverName: string | undefined;
529
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
530
- rendererTypeName: string;
531
- error: unknown;
532
- statusMessage: string | undefined;
533
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
534
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
535
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
536
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
537
- }, {
538
- rendererTypeName: string;
539
- error: unknown;
540
- statusMessage: string | undefined;
541
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
542
- }> | null;
543
- readonly adapterConfig: any;
544
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
545
- readonly isMinimized: boolean;
546
- readonly parentDisplay: any;
547
- readonly effectiveRpcDriverName: any;
548
- } & {
549
- renderProps(): any;
550
- renderingProps(): {
551
- displayModel: {
552
- id: string;
553
- type: string;
554
- rpcDriverName: string | undefined;
555
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
556
- rendererTypeName: string;
557
- error: unknown;
558
- statusMessage: string | undefined;
559
- } & {
560
- readonly RenderingComponent: React.FC<{
561
- model: {
562
- id: string;
563
- type: string;
564
- rpcDriverName: string | undefined;
565
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
566
- rendererTypeName: string;
567
- error: unknown;
568
- statusMessage: string | undefined;
569
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
570
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
571
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
572
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
573
- }, {
574
- rendererTypeName: string;
575
- error: unknown;
576
- statusMessage: string | undefined;
577
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
578
- onHorizontalScroll?: () => void;
579
- blockState?: Record<string, any>;
580
- }>;
581
- readonly DisplayBlurb: React.FC<{
582
- model: {
583
- id: string;
584
- type: string;
585
- rpcDriverName: string | undefined;
586
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
587
- rendererTypeName: string;
588
- error: unknown;
589
- statusMessage: string | undefined;
590
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
591
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
592
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
593
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
594
- }, {
595
- rendererTypeName: string;
596
- error: unknown;
597
- statusMessage: string | undefined;
598
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
599
- }> | null;
600
- readonly adapterConfig: any;
601
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
602
- readonly isMinimized: boolean;
603
- readonly parentDisplay: any;
604
- readonly effectiveRpcDriverName: any;
605
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
606
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
607
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
608
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
609
- }, {
610
- rendererTypeName: string;
611
- error: unknown;
612
- statusMessage: string | undefined;
613
- } & {
614
- readonly RenderingComponent: React.FC<{
615
- model: {
616
- id: string;
617
- type: string;
618
- rpcDriverName: string | undefined;
619
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
620
- rendererTypeName: string;
621
- error: unknown;
622
- statusMessage: string | undefined;
623
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
624
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
625
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
626
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
627
- }, {
628
- rendererTypeName: string;
629
- error: unknown;
630
- statusMessage: string | undefined;
631
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
632
- onHorizontalScroll?: () => void;
633
- blockState?: Record<string, any>;
634
- }>;
635
- readonly DisplayBlurb: React.FC<{
636
- model: {
637
- id: string;
638
- type: string;
639
- rpcDriverName: string | undefined;
640
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
641
- rendererTypeName: string;
642
- error: unknown;
643
- statusMessage: string | undefined;
644
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
645
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
646
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
647
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
648
- }, {
649
- rendererTypeName: string;
650
- error: unknown;
651
- statusMessage: string | undefined;
652
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
653
- }> | null;
654
- readonly adapterConfig: any;
655
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
656
- readonly isMinimized: boolean;
657
- readonly parentDisplay: any;
658
- readonly effectiveRpcDriverName: any;
659
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
660
- };
661
- readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
662
- readonly DisplayMessageComponent: undefined | React.FC<any>;
663
- trackMenuItems(): MenuItem[];
664
- readonly viewMenuActions: MenuItem[];
665
- regionCannotBeRendered(): null;
666
- } & {
667
- setStatusMessage(arg?: string): void;
668
- setError(error?: unknown): void;
669
- setRpcDriverName(rpcDriverName: string): void;
670
- reload(): void;
671
- } & {
672
- scrollTop: number;
673
- } & {
674
- readonly height: number;
675
- } & {
676
- setScrollTop(scrollTop: number): void;
677
- setHeight(displayHeight: number): number;
678
- resizeHeight(distance: number): number;
679
- } & {
680
- featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
681
- featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
682
- currStatsBpPerPx: number;
683
- } & {
684
- readonly currentBytesRequested: number;
685
- readonly currentFeatureScreenDensity: number;
686
- readonly maxFeatureScreenDensity: any;
687
- readonly featureDensityStatsReady: boolean;
688
- readonly maxAllowableBytes: number;
689
- } & {
690
- afterAttach(): void;
691
- } & {
692
- setCurrStatsBpPerPx(n: number): void;
693
- setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
694
- getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
695
- setFeatureDensityStatsP(arg: any): void;
696
- setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
697
- clearFeatureDensityStats(): void;
698
- } & {
699
- readonly regionTooLarge: boolean;
700
- readonly regionTooLargeReason: string;
701
- } & {
702
- readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
703
- regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
704
- regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
705
- } & {
706
- mouseoverExtraInformation: string | undefined;
707
- featureIdUnderMouse: undefined | string;
708
- subfeatureIdUnderMouse: undefined | string;
709
- contextMenuFeature: undefined | Feature;
710
- } & {
711
- readonly DisplayMessageComponent: undefined | React.FC<any>;
712
- readonly blockType: "staticBlocks" | "dynamicBlocks";
713
- readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
714
- } & {
715
- readonly renderDelay: number;
716
- readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
717
- legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
718
- svgLegendWidth(theme?: import("@mui/material").Theme): number;
719
- readonly selectedFeatureId: string | undefined;
720
- readonly featureWidgetType: {
721
- type: string;
722
- id: string;
723
- };
724
- } & {
725
- readonly showTooltipsEnabled: boolean;
726
- readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
727
- readonly featureUnderMouse: Feature | undefined;
728
- getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
729
- readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
730
- getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
731
- getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
732
- searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
733
- readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
734
- } & {
735
- addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
736
- deleteBlock(key: string): void;
737
- selectFeature(feature: Feature): void;
738
- navToFeature(feature: Feature): void;
739
- clearFeatureSelection(): void;
740
- setFeatureIdUnderMouse(feature?: string): void;
741
- setSubfeatureIdUnderMouse(subfeatureId?: string): void;
742
- setContextMenuFeature(feature?: Feature): void;
743
- setMouseoverExtraInformation(extra?: string): void;
744
- setShowLegend(s: boolean): void;
745
- setShowTooltips(arg: boolean): void;
746
- } & {
747
- reload(): Promise<void>;
748
- } & {
749
- selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
750
- setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
751
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
752
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
753
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
754
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
755
- } & {
756
- heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
757
- } & {
758
- userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
759
- userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
760
- } & {
761
- blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
762
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
763
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
764
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
765
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
766
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
767
- }, {
768
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
769
- filled: boolean;
770
- reactElement: React.ReactElement | undefined;
771
- features: Map<string, Feature> | undefined;
772
- layout: any;
773
- blockStatusMessage: string;
774
- error: unknown;
775
- message: string | undefined;
776
- maxHeightReached: boolean;
777
- ReactComponent: ({ model, }: {
778
- model: {
779
- error?: unknown;
780
- reload: () => void;
781
- message?: React.ReactNode;
782
- statusMessage?: string;
783
- reactElement?: React.ReactElement;
784
- isRenderingPending?: boolean;
785
- displayHeight?: number;
786
- };
787
- }) => import("react/jsx-runtime").JSX.Element;
788
- renderProps: any;
789
- renderArgs: Record<string, unknown> | undefined;
790
- isRenderingPending: boolean;
791
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
792
- } & {
793
- doReload(): void;
794
- setStatusMessage(message: string): void;
795
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
796
- setMessage(messageText: string): void;
797
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
798
- setError(error: unknown): void;
799
- reload(): void;
800
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
801
- beforeDestroy(): void;
802
- } & {
803
- readonly statusMessage: any;
804
- readonly displayHeight: number | undefined;
805
- } & {
806
- afterAttach(): void;
807
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
808
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
809
- maxFeatureScreenDensity: {
810
- type: string;
811
- description: string;
812
- defaultValue: number;
813
- };
814
- fetchSizeLimit: {
815
- type: string;
816
- defaultValue: number;
817
- description: string;
818
- };
819
- height: {
820
- type: string;
821
- defaultValue: number;
822
- description: string;
823
- };
824
- mouseover: {
825
- type: string;
826
- description: string;
827
- defaultValue: string;
828
- contextVariable: string[];
829
- };
830
- jexlFilters: {
831
- type: string;
832
- description: string;
833
- defaultValue: never[];
834
- };
835
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
836
- showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
837
- showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
838
- }, {
839
- rendererTypeName: string;
840
- error: unknown;
841
- statusMessage: string | undefined;
842
- } & {
843
- readonly RenderingComponent: React.FC<{
844
- model: {
845
- id: string;
846
- type: string;
847
- rpcDriverName: string | undefined;
848
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
849
- rendererTypeName: string;
850
- error: unknown;
851
- statusMessage: string | undefined;
852
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
853
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
854
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
855
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
856
- }, {
857
- rendererTypeName: string;
858
- error: unknown;
859
- statusMessage: string | undefined;
860
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
861
- onHorizontalScroll?: () => void;
862
- blockState?: Record<string, any>;
863
- }>;
864
- readonly DisplayBlurb: React.FC<{
865
- model: {
866
- id: string;
867
- type: string;
868
- rpcDriverName: string | undefined;
869
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
870
- rendererTypeName: string;
871
- error: unknown;
872
- statusMessage: string | undefined;
873
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
874
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
875
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
876
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
877
- }, {
878
- rendererTypeName: string;
879
- error: unknown;
880
- statusMessage: string | undefined;
881
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
882
- }> | null;
883
- readonly adapterConfig: any;
884
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
885
- readonly isMinimized: boolean;
886
- readonly parentDisplay: any;
887
- readonly effectiveRpcDriverName: any;
888
- } & {
889
- renderProps(): any;
890
- renderingProps(): {
891
- displayModel: {
892
- id: string;
893
- type: string;
894
- rpcDriverName: string | undefined;
895
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
896
- rendererTypeName: string;
897
- error: unknown;
898
- statusMessage: string | undefined;
899
- } & {
900
- readonly RenderingComponent: React.FC<{
901
- model: {
902
- id: string;
903
- type: string;
904
- rpcDriverName: string | undefined;
905
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
906
- rendererTypeName: string;
907
- error: unknown;
908
- statusMessage: string | undefined;
909
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
910
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
911
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
912
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
913
- }, {
914
- rendererTypeName: string;
915
- error: unknown;
916
- statusMessage: string | undefined;
917
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
918
- onHorizontalScroll?: () => void;
919
- blockState?: Record<string, any>;
920
- }>;
921
- readonly DisplayBlurb: React.FC<{
922
- model: {
923
- id: string;
924
- type: string;
925
- rpcDriverName: string | undefined;
926
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
927
- rendererTypeName: string;
928
- error: unknown;
929
- statusMessage: string | undefined;
930
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
931
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
932
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
933
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
934
- }, {
935
- rendererTypeName: string;
936
- error: unknown;
937
- statusMessage: string | undefined;
938
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
939
- }> | null;
940
- readonly adapterConfig: any;
941
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
942
- readonly isMinimized: boolean;
943
- readonly parentDisplay: any;
944
- readonly effectiveRpcDriverName: any;
945
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
946
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
947
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
948
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
949
- }, {
950
- rendererTypeName: string;
951
- error: unknown;
952
- statusMessage: string | undefined;
953
- } & {
954
- readonly RenderingComponent: React.FC<{
955
- model: {
956
- id: string;
957
- type: string;
958
- rpcDriverName: string | undefined;
959
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
960
- rendererTypeName: string;
961
- error: unknown;
962
- statusMessage: string | undefined;
963
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
964
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
965
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
966
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
967
- }, {
968
- rendererTypeName: string;
969
- error: unknown;
970
- statusMessage: string | undefined;
971
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
972
- onHorizontalScroll?: () => void;
973
- blockState?: Record<string, any>;
974
- }>;
975
- readonly DisplayBlurb: React.FC<{
976
- model: {
977
- id: string;
978
- type: string;
979
- rpcDriverName: string | undefined;
980
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
981
- rendererTypeName: string;
982
- error: unknown;
983
- statusMessage: string | undefined;
984
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
985
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
986
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
987
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
988
- }, {
989
- rendererTypeName: string;
990
- error: unknown;
991
- statusMessage: string | undefined;
992
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
993
- }> | null;
994
- readonly adapterConfig: any;
995
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
996
- readonly isMinimized: boolean;
997
- readonly parentDisplay: any;
998
- readonly effectiveRpcDriverName: any;
999
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1000
- };
1001
- readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
1002
- readonly DisplayMessageComponent: undefined | React.FC<any>;
1003
- trackMenuItems(): MenuItem[];
1004
- readonly viewMenuActions: MenuItem[];
1005
- regionCannotBeRendered(): null;
1006
- } & {
1007
- setStatusMessage(arg?: string): void;
1008
- setError(error?: unknown): void;
1009
- setRpcDriverName(rpcDriverName: string): void;
1010
- reload(): void;
1011
- } & {
1012
- scrollTop: number;
1013
- } & {
1014
- readonly height: number;
1015
- } & {
1016
- setScrollTop(scrollTop: number): void;
1017
- setHeight(displayHeight: number): number;
1018
- resizeHeight(distance: number): number;
1019
- } & {
1020
- featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1021
- featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
1022
- currStatsBpPerPx: number;
1023
- } & {
1024
- readonly currentBytesRequested: number;
1025
- readonly currentFeatureScreenDensity: number;
1026
- readonly maxFeatureScreenDensity: any;
1027
- readonly featureDensityStatsReady: boolean;
1028
- readonly maxAllowableBytes: number;
1029
- } & {
1030
- afterAttach(): void;
1031
- } & {
1032
- setCurrStatsBpPerPx(n: number): void;
1033
- setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1034
- getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1035
- setFeatureDensityStatsP(arg: any): void;
1036
- setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1037
- clearFeatureDensityStats(): void;
1038
- } & {
1039
- readonly regionTooLarge: boolean;
1040
- readonly regionTooLargeReason: string;
1041
- } & {
1042
- readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1043
- regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1044
- regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1045
- } & {
1046
- mouseoverExtraInformation: string | undefined;
1047
- featureIdUnderMouse: undefined | string;
1048
- subfeatureIdUnderMouse: undefined | string;
1049
- contextMenuFeature: undefined | Feature;
1050
- } & {
1051
- readonly DisplayMessageComponent: undefined | React.FC<any>;
1052
- readonly blockType: "staticBlocks" | "dynamicBlocks";
1053
- readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
1054
- } & {
1055
- readonly renderDelay: number;
1056
- readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
1057
- legendItems(_theme?: import("@mui/material").Theme): import("../index.ts").LegendItem[];
1058
- svgLegendWidth(theme?: import("@mui/material").Theme): number;
1059
- readonly selectedFeatureId: string | undefined;
1060
- readonly featureWidgetType: {
1061
- type: string;
1062
- id: string;
1063
- };
1064
- } & {
1065
- readonly showTooltipsEnabled: boolean;
1066
- readonly features: import("@jbrowse/core/util/compositeMap").default<string, Feature>;
1067
- readonly featureUnderMouse: Feature | undefined;
1068
- getFeatureById(featureId: string, parentFeatureId?: string): Feature | undefined;
1069
- readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("../BaseLinearDisplay/types.ts").LayoutRecord>;
1070
- getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
1071
- getFeatureByID(blockKey: string, id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1072
- searchFeatureByID(id: string): import("../BaseLinearDisplay/types.ts").LayoutRecord | undefined;
1073
- readonly floatingLabelData: Map<string, import("../BaseLinearDisplay/components/util.ts").FeatureLabelData>;
1074
- } & {
1075
- addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
1076
- deleteBlock(key: string): void;
1077
- selectFeature(feature: Feature): void;
1078
- navToFeature(feature: Feature): void;
1079
- clearFeatureSelection(): void;
1080
- setFeatureIdUnderMouse(feature?: string): void;
1081
- setSubfeatureIdUnderMouse(subfeatureId?: string): void;
1082
- setContextMenuFeature(feature?: Feature): void;
1083
- setMouseoverExtraInformation(extra?: string): void;
1084
- setShowLegend(s: boolean): void;
1085
- setShowTooltips(arg: boolean): void;
1086
- } & {
1087
- reload(): Promise<void>;
1088
- } & {
1089
- selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1090
- setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1091
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1092
- onMouseMove(_: unknown, featureId?: string): void;
1093
- onMouseLeave(_: unknown): void;
1094
- onContextMenu(_: unknown): void;
1095
- onFeatureClick(_: unknown, featureId?: string): void;
1096
- };
1097
- renderProps(): any;
1098
- } & {
1099
- renderSvg(opts: import("../index.ts").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
1100
- afterAttach(): void;
1101
- } & {
1102
- featureUnderMouseVolatile: Feature | undefined;
1103
- } & {
1104
- activeFilters(): string[];
1105
- readonly rendererTypeName: any;
1106
- readonly sequenceAdapter: any;
1107
- readonly showLabels: any;
1108
- readonly showDescriptions: any;
1109
- readonly maxHeight: any;
1110
- readonly displayMode: any;
1111
- } & {
1112
- readonly rendererConfig: {
1113
- showLabels: any;
1114
- showDescriptions: any;
1115
- displayMode: any;
1116
- maxHeight: any;
1117
- };
1118
- } & {
1119
- setJexlFilters(f?: string[]): void;
1120
- setFeatureUnderMouse(feat?: Feature): void;
1121
- toggleShowLabels(): void;
1122
- toggleShowDescriptions(): void;
1123
- setDisplayMode(val: string): void;
1124
- setMaxHeight(val?: number): void;
1125
- } & {
1126
- readonly featureUnderMouse: Feature | undefined;
1127
- } & {
1128
- renderProps(): {
1129
- config: {
1130
- showLabels: any;
1131
- showDescriptions: any;
1132
- displayMode: any;
1133
- maxHeight: any;
1134
- };
1135
- filters: SerializableFilterChain;
1136
- sequenceAdapter: any;
1137
- };
1138
- renderingProps(): {
1139
- onFeatureClick(_: unknown, featureId?: string): Promise<void>;
1140
- onFeatureContextMenu(_: unknown, featureId?: string): Promise<void>;
1141
- displayModel: {
1142
- id: string;
1143
- type: string;
1144
- rpcDriverName: string | undefined;
1145
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1146
- rendererTypeName: string;
1147
- error: unknown;
1148
- statusMessage: string | undefined;
1149
- } & {
1150
- readonly RenderingComponent: React.FC<{
1151
- model: {
1152
- id: string;
1153
- type: string;
1154
- rpcDriverName: string | undefined;
1155
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1156
- rendererTypeName: string;
1157
- error: unknown;
1158
- statusMessage: string | undefined;
1159
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1160
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1161
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1162
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1163
- }, {
1164
- rendererTypeName: string;
1165
- error: unknown;
1166
- statusMessage: string | undefined;
1167
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1168
- onHorizontalScroll?: () => void;
1169
- blockState?: Record<string, any>;
1170
- }>;
1171
- readonly DisplayBlurb: React.FC<{
1172
- model: {
1173
- id: string;
1174
- type: string;
1175
- rpcDriverName: string | undefined;
1176
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1177
- rendererTypeName: string;
1178
- error: unknown;
1179
- statusMessage: string | undefined;
1180
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1181
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1182
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1183
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1184
- }, {
1185
- rendererTypeName: string;
1186
- error: unknown;
1187
- statusMessage: string | undefined;
1188
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1189
- }> | null;
1190
- readonly adapterConfig: any;
1191
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1192
- readonly isMinimized: boolean;
1193
- readonly parentDisplay: any;
1194
- readonly effectiveRpcDriverName: any;
1195
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1196
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1197
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1198
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1199
- }, {
1200
- rendererTypeName: string;
1201
- error: unknown;
1202
- statusMessage: string | undefined;
1203
- } & {
1204
- readonly RenderingComponent: React.FC<{
1205
- model: {
1206
- id: string;
1207
- type: string;
1208
- rpcDriverName: string | undefined;
1209
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1210
- rendererTypeName: string;
1211
- error: unknown;
1212
- statusMessage: string | undefined;
1213
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1214
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1215
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1216
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1217
- }, {
1218
- rendererTypeName: string;
1219
- error: unknown;
1220
- statusMessage: string | undefined;
1221
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1222
- onHorizontalScroll?: () => void;
1223
- blockState?: Record<string, any>;
1224
- }>;
1225
- readonly DisplayBlurb: React.FC<{
1226
- model: {
1227
- id: string;
1228
- type: string;
1229
- rpcDriverName: string | undefined;
1230
- } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
1231
- rendererTypeName: string;
1232
- error: unknown;
1233
- statusMessage: string | undefined;
1234
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
1235
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1236
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1237
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1238
- }, {
1239
- rendererTypeName: string;
1240
- error: unknown;
1241
- statusMessage: string | undefined;
1242
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1243
- }> | null;
1244
- readonly adapterConfig: any;
1245
- readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
1246
- readonly isMinimized: boolean;
1247
- readonly parentDisplay: any;
1248
- readonly effectiveRpcDriverName: any;
1249
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1250
- };
1251
- filterMenuItems(): MenuItem[];
1252
- } & {
1253
- trackMenuItems(): MenuItem[];
1254
- } & {
1255
- afterAttach(): void;
1256
- }, {
1257
- type: string;
1258
- } & Partial<import("@jbrowse/mobx-state-tree/dist/internal").ExtractCFromProps<{
1259
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1260
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1261
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1262
- } & {
1263
- heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1264
- } & {
1265
- userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1266
- userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1267
- } & {
1268
- blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1269
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1270
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1271
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1272
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1273
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1274
- }, {
1275
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
1276
- filled: boolean;
1277
- reactElement: React.ReactElement | undefined;
1278
- features: Map<string, Feature> | undefined;
1279
- layout: any;
1280
- blockStatusMessage: string;
1281
- error: unknown;
1282
- message: string | undefined;
1283
- maxHeightReached: boolean;
1284
- ReactComponent: ({ model, }: {
1285
- model: {
1286
- error?: unknown;
1287
- reload: () => void;
1288
- message?: React.ReactNode;
1289
- statusMessage?: string;
1290
- reactElement?: React.ReactElement;
1291
- isRenderingPending?: boolean;
1292
- displayHeight?: number;
1293
- };
1294
- }) => import("react/jsx-runtime").JSX.Element;
1295
- renderProps: any;
1296
- renderArgs: Record<string, unknown> | undefined;
1297
- isRenderingPending: boolean;
1298
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1299
- } & {
1300
- doReload(): void;
1301
- setStatusMessage(message: string): void;
1302
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
1303
- setMessage(messageText: string): void;
1304
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1305
- setError(error: unknown): void;
1306
- reload(): void;
1307
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1308
- beforeDestroy(): void;
1309
- } & {
1310
- readonly statusMessage: any;
1311
- readonly displayHeight: number | undefined;
1312
- } & {
1313
- afterAttach(): void;
1314
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1315
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1316
- maxFeatureScreenDensity: {
1317
- type: string;
1318
- description: string;
1319
- defaultValue: number;
1320
- };
1321
- fetchSizeLimit: {
1322
- type: string;
1323
- defaultValue: number;
1324
- description: string;
1325
- };
1326
- height: {
1327
- type: string;
1328
- defaultValue: number;
1329
- description: string;
1330
- };
1331
- mouseover: {
1332
- type: string;
1333
- description: string;
1334
- defaultValue: string;
1335
- contextVariable: string[];
1336
- };
1337
- jexlFilters: {
1338
- type: string;
1339
- description: string;
1340
- defaultValue: never[];
1341
- };
1342
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1343
- showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1344
- showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1345
- }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
1346
- id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1347
- type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1348
- rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1349
- } & {
1350
- heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1351
- } & {
1352
- userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1353
- userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1354
- } & {
1355
- blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1356
- key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1357
- region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1358
- reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1359
- isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1360
- isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1361
- }, {
1362
- stopToken: import("@jbrowse/core/util").StopToken | undefined;
1363
- filled: boolean;
1364
- reactElement: React.ReactElement | undefined;
1365
- features: Map<string, Feature> | undefined;
1366
- layout: any;
1367
- blockStatusMessage: string;
1368
- error: unknown;
1369
- message: string | undefined;
1370
- maxHeightReached: boolean;
1371
- ReactComponent: ({ model, }: {
1372
- model: {
1373
- error?: unknown;
1374
- reload: () => void;
1375
- message?: React.ReactNode;
1376
- statusMessage?: string;
1377
- reactElement?: React.ReactElement;
1378
- isRenderingPending?: boolean;
1379
- displayHeight?: number;
1380
- };
1381
- }) => import("react/jsx-runtime").JSX.Element;
1382
- renderProps: any;
1383
- renderArgs: Record<string, unknown> | undefined;
1384
- isRenderingPending: boolean;
1385
- cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
1386
- } & {
1387
- doReload(): void;
1388
- setStatusMessage(message: string): void;
1389
- setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
1390
- setMessage(messageText: string): void;
1391
- setRendered(props: import("../BaseLinearDisplay/models/serverSideRenderedBlock.ts").RenderedProps | undefined): void;
1392
- setError(error: unknown): void;
1393
- reload(): void;
1394
- setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
1395
- beforeDestroy(): void;
1396
- } & {
1397
- readonly statusMessage: any;
1398
- readonly displayHeight: number | undefined;
1399
- } & {
1400
- afterAttach(): void;
1401
- }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1402
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1403
- maxFeatureScreenDensity: {
1404
- type: string;
1405
- description: string;
1406
- defaultValue: number;
1407
- };
1408
- fetchSizeLimit: {
1409
- type: string;
1410
- defaultValue: number;
1411
- description: string;
1412
- };
1413
- height: {
1414
- type: string;
1415
- defaultValue: number;
1416
- description: string;
1417
- };
1418
- mouseover: {
1419
- type: string;
1420
- description: string;
1421
- defaultValue: string;
1422
- contextVariable: string[];
1423
- };
1424
- jexlFilters: {
1425
- type: string;
1426
- description: string;
1427
- defaultValue: never[];
1428
- };
1429
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1430
- showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1431
- showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1432
- } & {
1433
- type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearFeatureDisplay">;
1434
- trackShowLabels: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1435
- trackShowDescriptions: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1436
- trackDisplayMode: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
1437
- trackMaxHeight: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1438
- configuration: AnyConfigurationSchemaType;
1439
- jexlFiltersSetting: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").ISimpleType<string>>>;
1440
- }>>;
1441
- export type LinearFeatureDisplayStateModel = ReturnType<typeof stateModelFactory>;
1442
- export type LinearFeatureDisplayModel = Instance<LinearFeatureDisplayStateModel>;
1443
- export default stateModelFactory;