@jbrowse/plugin-linear-genome-view 2.1.0 → 2.1.2

package/dist/LinearBasicDisplay/configSchema.js.map

@@ -1 +1 @@
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+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/LinearBasicDisplay/configSchema.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AAEjE,4DAAoE;AAEpE,SAAwB,mBAAmB,CAAC,aAA4B;IACtE,OAAO,IAAA,mCAAmB,EACxB,oBAAoB,EACpB;QACE,SAAS,EAAE;YACT,IAAI,EAAE,QAAQ;YACd,WAAW,EAAE,sCAAsC;YACnD,YAAY,EAAE,0BAA0B;YAExC,eAAe,EAAE,CAAC,SAAS,CAAC;SAC7B;QACD,QAAQ,EAAE,aAAa,CAAC,yBAAyB,CAAC,UAAU,CAAC;KAC9D,EACD,EAAE,iBAAiB,EAAE,iDAA6B,EAAE,eAAe,EAAE,IAAI,EAAE,CAC5E,CAAA;AACH,CAAC;AAfD,sCAeC"}

package/dist/LinearBasicDisplay/model.js

@@ -1,15 +1,4 @@
 "use strict";
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
 var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
     if (k2 === undefined) k2 = k;
     var desc = Object.getOwnPropertyDescriptor(m, k);
@@ -33,151 +22,134 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
-var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
-    if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
-        if (ar || !(i in from)) {
-            if (!ar) ar = Array.prototype.slice.call(from, 0, i);
-            ar[i] = from[i];
-        }
-    }
-    return to.concat(ar || Array.prototype.slice.call(from));
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = require("react");
-var configuration_1 = require("@jbrowse/core/configuration");
-var util_1 = require("@jbrowse/core/util");
-var mobx_state_tree_1 = require("mobx-state-tree");
+const react_1 = require("react");
+const configuration_1 = require("@jbrowse/core/configuration");
+const util_1 = require("@jbrowse/core/util");
+const mobx_state_tree_1 = require("mobx-state-tree");
 // icons
-var Visibility_1 = __importDefault(require("@mui/icons-material/Visibility"));
+const Visibility_1 = __importDefault(require("@mui/icons-material/Visibility"));
 // locals
-var BaseLinearDisplay_1 = require("../BaseLinearDisplay");
-var SetMaxHeightDlg = (0, react_1.lazy)(function () { return Promise.resolve().then(function () { return __importStar(require('./components/SetMaxHeight')); }); });
-var stateModelFactory = function (configSchema) {
-    return mobx_state_tree_1.types
-        .compose('LinearBasicDisplay', BaseLinearDisplay_1.BaseLinearDisplay, mobx_state_tree_1.types.model({
-        type: mobx_state_tree_1.types.literal('LinearBasicDisplay'),
-        trackShowLabels: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.boolean),
-        trackShowDescriptions: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.boolean),
-        trackDisplayMode: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.string),
-        trackMaxHeight: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.number),
-        configuration: (0, configuration_1.ConfigurationReference)(configSchema),
-    }))
-        .views(function (self) { return ({
-        get rendererTypeName() {
-            return (0, configuration_1.getConf)(self, ['renderer', 'type']);
-        },
-        get showLabels() {
-            var _a;
-            return (_a = self.trackShowLabels) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'showLabels']);
-        },
-        get showDescriptions() {
-            var _a;
-            return ((_a = self.trackShowDescriptions) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'showDescriptions']));
-        },
-        get maxHeight() {
-            var _a;
-            return (_a = self.trackMaxHeight) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'maxHeight']);
-        },
-        get displayMode() {
-            var _a;
-            return ((_a = self.trackDisplayMode) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'displayMode']));
-        },
-    }); })
-        .views(function (self) { return ({
-        get rendererConfig() {
-            var configBlob = (0, configuration_1.getConf)(self, ['renderer']) || {};
-            var config = configBlob;
-            return self.rendererType.configSchema.create(__assign(__assign({}, config), { showLabels: self.showLabels, showDescriptions: self.showDescriptions, displayMode: self.displayMode, maxHeight: self.maxHeight }), (0, mobx_state_tree_1.getEnv)(self));
+const BaseLinearDisplay_1 = require("../BaseLinearDisplay");
+const SetMaxHeightDlg = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/SetMaxHeight'))));
+const stateModelFactory = (configSchema) => mobx_state_tree_1.types
+    .compose('LinearBasicDisplay', BaseLinearDisplay_1.BaseLinearDisplay, mobx_state_tree_1.types.model({
+    type: mobx_state_tree_1.types.literal('LinearBasicDisplay'),
+    trackShowLabels: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.boolean),
+    trackShowDescriptions: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.boolean),
+    trackDisplayMode: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.string),
+    trackMaxHeight: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.number),
+    configuration: (0, configuration_1.ConfigurationReference)(configSchema),
+}))
+    .views(self => ({
+    get rendererTypeName() {
+        return (0, configuration_1.getConf)(self, ['renderer', 'type']);
+    },
+    get showLabels() {
+        var _a;
+        return (_a = self.trackShowLabels) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'showLabels']);
+    },
+    get showDescriptions() {
+        var _a;
+        return ((_a = self.trackShowDescriptions) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'showDescriptions']));
+    },
+    get maxHeight() {
+        var _a;
+        return (_a = self.trackMaxHeight) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'maxHeight']);
+    },
+    get displayMode() {
+        var _a;
+        return ((_a = self.trackDisplayMode) !== null && _a !== void 0 ? _a : (0, configuration_1.getConf)(self, ['renderer', 'displayMode']));
+    },
+}))
+    .views(self => ({
+    get rendererConfig() {
+        const configBlob = (0, configuration_1.getConf)(self, ['renderer']) || {};
+        const config = configBlob;
+        return self.rendererType.configSchema.create({
+            ...config,
+            showLabels: self.showLabels,
+            showDescriptions: self.showDescriptions,
+            displayMode: self.displayMode,
+            maxHeight: self.maxHeight,
+        }, (0, mobx_state_tree_1.getEnv)(self));
+    },
+}))
+    .actions(self => ({
+    toggleShowLabels() {
+        self.trackShowLabels = !self.showLabels;
+    },
+    toggleShowDescriptions() {
+        self.trackShowDescriptions = !self.showDescriptions;
+    },
+    setDisplayMode(val) {
+        self.trackDisplayMode = val;
+    },
+    setMaxHeight(val) {
+        self.trackMaxHeight = val;
+    },
+}))
+    .views(self => {
+    const { trackMenuItems: superTrackMenuItems, renderProps: superRenderProps, } = self;
+    return {
+        renderProps() {
+            const config = self.rendererConfig;
+            const superProps = superRenderProps();
+            const superPropsOmit = superProps;
+            return {
+                ...superPropsOmit,
+                config,
+            };
         },
-    }); })
-        .actions(function (self) { return ({
-        toggleShowLabels: function () {
-            self.trackShowLabels = !self.showLabels;
-        },
-        toggleShowDescriptions: function () {
-            self.trackShowDescriptions = !self.showDescriptions;
-        },
-        setDisplayMode: function (val) {
-            self.trackDisplayMode = val;
-        },
-        setMaxHeight: function (val) {
-            self.trackMaxHeight = val;
-        },
-    }); })
-        .views(function (self) {
-        var superTrackMenuItems = self.trackMenuItems, superRenderProps = self.renderProps;
-        return {
-            renderProps: function () {
-                var config = self.rendererConfig;
-                var superProps = superRenderProps();
-                var superPropsOmit = superProps;
-                return __assign(__assign({}, superPropsOmit), { config: config });
-            },
-            trackMenuItems: function () {
-                return __spreadArray(__spreadArray([], __read(superTrackMenuItems()), false), [
-                    {
-                        label: 'Show labels',
-                        icon: Visibility_1.default,
-                        type: 'checkbox',
-                        checked: self.showLabels,
-                        onClick: function () {
-                            self.toggleShowLabels();
-                        },
-                    },
-                    {
-                        label: 'Show descriptions',
-                        icon: Visibility_1.default,
-                        type: 'checkbox',
-                        checked: self.showDescriptions,
-                        onClick: function () { return self.toggleShowDescriptions(); },
+        trackMenuItems() {
+            return [
+                ...superTrackMenuItems(),
+                {
+                    label: 'Show labels',
+                    icon: Visibility_1.default,
+                    type: 'checkbox',
+                    checked: self.showLabels,
+                    onClick: () => {
+                        self.toggleShowLabels();
                     },
-                    {
-                        label: 'Display mode',
-                        icon: Visibility_1.default,
-                        subMenu: [
-                            'compact',
-                            'reducedRepresentation',
-                            'normal',
-                            'collapse',
-                        ].map(function (val) { return ({
-                            label: val,
-                            onClick: function () {
-                                self.setDisplayMode(val);
-                            },
-                        }); }),
-                    },
-                    {
-                        label: 'Set max height',
-                        onClick: function () {
-                            (0, util_1.getSession)(self).queueDialog(function (handleClose) { return [
-                                SetMaxHeightDlg,
-                                { model: self, handleClose: handleClose },
-                            ]; });
+                },
+                {
+                    label: 'Show descriptions',
+                    icon: Visibility_1.default,
+                    type: 'checkbox',
+                    checked: self.showDescriptions,
+                    onClick: () => self.toggleShowDescriptions(),
+                },
+                {
+                    label: 'Display mode',
+                    icon: Visibility_1.default,
+                    subMenu: [
+                        'compact',
+                        'reducedRepresentation',
+                        'normal',
+                        'collapse',
+                    ].map(val => ({
+                        label: val,
+                        onClick: () => {
+                            self.setDisplayMode(val);
                         },
+                    })),
+                },
+                {
+                    label: 'Set max height',
+                    onClick: () => {
+                        (0, util_1.getSession)(self).queueDialog(handleClose => [
+                            SetMaxHeightDlg,
+                            { model: self, handleClose },
+                        ]);
                     },
-                ], false);
-            },
-        };
-    });
-};
+                },
+            ];
+        },
+    };
+});
 exports.default = stateModelFactory;
 //# sourceMappingURL=model.js.map

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+{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/LinearBasicDisplay/model.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,iCAA4B;AAC5B,+DAIoC;AACpC,6CAA+C;AAE/C,qDAAyD;AAEzD,QAAQ;AACR,gFAA2D;AAE3D,SAAS;AACT,4DAAwD;AAExD,MAAM,eAAe,GAAG,IAAA,YAAI,EAAC,GAAG,EAAE,mDAAQ,2BAA2B,GAAC,CAAC,CAAA;AAEvE,MAAM,iBAAiB,GAAG,CAAC,YAAwC,EAAE,EAAE,CACrE,uBAAK;KACF,OAAO,CACN,oBAAoB,EACpB,qCAAiB,EACjB,uBAAK,CAAC,KAAK,CAAC;IACV,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;IACzC,eAAe,EAAE,uBAAK,CAAC,KAAK,CAAC,uBAAK,CAAC,OAAO,CAAC;IAC3C,qBAAqB,EAAE,uBAAK,CAAC,KAAK,CAAC,uBAAK,CAAC,OAAO,CAAC;IACjD,gBAAgB,EAAE,uBAAK,CAAC,KAAK,CAAC,uBAAK,CAAC,MAAM,CAAC;IAC3C,cAAc,EAAE,uBAAK,CAAC,KAAK,CAAC,uBAAK,CAAC,MAAM,CAAC;IACzC,aAAa,EAAE,IAAA,sCAAsB,EAAC,YAAY,CAAC;CACpD,CAAC,CACH;KACA,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd,IAAI,gBAAgB;QAClB,OAAO,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,EAAE,MAAM,CAAC,CAAC,CAAA;IAC5C,CAAC;IAED,IAAI,UAAU;;QACZ,OAAO,MAAA,IAAI,CAAC,eAAe,mCAAI,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,EAAE,YAAY,CAAC,CAAC,CAAA;IAC1E,CAAC;IAED,IAAI,gBAAgB;;QAClB,OAAO,CACL,MAAA,IAAI,CAAC,qBAAqB,mCAC1B,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,EAAE,kBAAkB,CAAC,CAAC,CAChD,CAAA;IACH,CAAC;IAED,IAAI,SAAS;;QACX,OAAO,MAAA,IAAI,CAAC,cAAc,mCAAI,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,EAAE,WAAW,CAAC,CAAC,CAAA;IACxE,CAAC;IAED,IAAI,WAAW;;QACb,OAAO,CACL,MAAA,IAAI,CAAC,gBAAgB,mCAAI,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,EAAE,aAAa,CAAC,CAAC,CACpE,CAAA;IACH,CAAC;CACF,CAAC,CAAC;KACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd,IAAI,cAAc;QAChB,MAAM,UAAU,GAAG,IAAA,uBAAO,EAAC,IAAI,EAAE,CAAC,UAAU,CAAC,CAAC,IAAI,EAAE,CAAA;QACpD,MAAM,MAAM,GAAG,UAA6C,CAAA;QAE5D,OAAO,IAAI,CAAC,YAAY,CAAC,YAAY,CAAC,MAAM,CAC1C;YACE,GAAG,MAAM;YACT,UAAU,EAAE,IAAI,CAAC,UAAU;YAC3B,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,WAAW,EAAE,IAAI,CAAC,WAAW;YAC7B,SAAS,EAAE,IAAI,CAAC,SAAS;SAC1B,EACD,IAAA,wBAAM,EAAC,IAAI,CAAC,CACb,CAAA;IACH,CAAC;CACF,CAAC,CAAC;KAEF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,gBAAgB;QACd,IAAI,CAAC,eAAe,GAAG,CAAC,IAAI,CAAC,UAAU,CAAA;IACzC,CAAC;IACD,sBAAsB;QACpB,IAAI,CAAC,qBAAqB,GAAG,CAAC,IAAI,CAAC,gBAAgB,CAAA;IACrD,CAAC;IACD,cAAc,CAAC,GAAW;QACxB,IAAI,CAAC,gBAAgB,GAAG,GAAG,CAAA;IAC7B,CAAC;IACD,YAAY,CAAC,GAAW;QACtB,IAAI,CAAC,cAAc,GAAG,GAAG,CAAA;IAC3B,CAAC;CACF,CAAC,CAAC;KACF,KAAK,CAAC,IAAI,CAAC,EAAE;IACZ,MAAM,EACJ,cAAc,EAAE,mBAAmB,EACnC,WAAW,EAAE,gBAAgB,GAC9B,GAAG,IAAI,CAAA;IACR,OAAO;QACL,WAAW;YACT,MAAM,MAAM,GAAG,IAAI,CAAC,cAAc,CAAA;YAClC,MAAM,UAAU,GAAG,gBAAgB,EAAE,CAAA;YAErC,MAAM,cAAc,GAAG,UAA6C,CAAA;YAEpE,OAAO;gBACL,GAAG,cAAc;gBAEjB,MAAM;aACP,CAAA;QACH,CAAC;QAED,cAAc;YACZ,OAAO;gBACL,GAAG,mBAAmB,EAAE;gBACxB;oBACE,KAAK,EAAE,aAAa;oBACpB,IAAI,EAAE,oBAAc;oBACpB,IAAI,EAAE,UAAU;oBAChB,OAAO,EAAE,IAAI,CAAC,UAAU;oBACxB,OAAO,EAAE,GAAG,EAAE;wBACZ,IAAI,CAAC,gBAAgB,EAAE,CAAA;oBACzB,CAAC;iBACF;gBACD;oBACE,KAAK,EAAE,mBAAmB;oBAC1B,IAAI,EAAE,oBAAc;oBACpB,IAAI,EAAE,UAAU;oBAChB,OAAO,EAAE,IAAI,CAAC,gBAAgB;oBAC9B,OAAO,EAAE,GAAG,EAAE,CAAC,IAAI,CAAC,sBAAsB,EAAE;iBAC7C;gBACD;oBACE,KAAK,EAAE,cAAc;oBACrB,IAAI,EAAE,oBAAc;oBACpB,OAAO,EAAE;wBACP,SAAS;wBACT,uBAAuB;wBACvB,QAAQ;wBACR,UAAU;qBACX,CAAC,GAAG,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;wBACZ,KAAK,EAAE,GAAG;wBACV,OAAO,EAAE,GAAG,EAAE;4BACZ,IAAI,CAAC,cAAc,CAAC,GAAG,CAAC,CAAA;wBAC1B,CAAC;qBACF,CAAC,CAAC;iBACJ;gBACD;oBACE,KAAK,EAAE,gBAAgB;oBACvB,OAAO,EAAE,GAAG,EAAE;wBACZ,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAC,WAAW,CAAC,WAAW,CAAC,EAAE,CAAC;4BAC1C,eAAe;4BACf,EAAE,KAAK,EAAE,IAAI,EAAE,WAAW,EAAE;yBAC7B,CAAC,CAAA;oBACJ,CAAC;iBACF;aACF,CAAA;QACH,CAAC;KACF,CAAA;AACH,CAAC,CAAC,CAAA;AAKN,kBAAe,iBAAiB,CAAA"}

package/dist/LinearGenomeView/components/CenterLine.js

@@ -23,10 +23,10 @@ var __importStar = (this && this.__importStar) || function (mod) {
     return result;
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var mui_1 = require("tss-react/mui");
-var mobx_react_1 = require("mobx-react");
-var useStyles = (0, mui_1.makeStyles)()(function () { return ({
+const react_1 = __importStar(require("react"));
+const mui_1 = require("tss-react/mui");
+const mobx_react_1 = require("mobx-react");
+const useStyles = (0, mui_1.makeStyles)()(() => ({
     centerLineContainer: {
         background: 'transparent',
         height: '100%',
@@ -43,15 +43,14 @@ var useStyles = (0, mui_1.makeStyles)()(function () { return ({
         whiteSpace: 'nowrap',
         fontWeight: 'bold',
     },
-}); });
-function CenterLine(_a) {
-    var model = _a.model;
-    var bpPerPx = model.bpPerPx, centerLineInfo = model.centerLineInfo, trackHeights = model.trackHeights, tracks = model.tracks, width = model.width;
-    var ref = (0, react_1.useRef)(null);
-    var classes = useStyles().classes;
-    var startingPosition = width / 2;
+}));
+function CenterLine({ model }) {
+    const { bpPerPx, centerLineInfo, trackHeights, tracks, width } = model;
+    const ref = (0, react_1.useRef)(null);
+    const { classes } = useStyles();
+    const startingPosition = width / 2;
     return tracks.length ? (react_1.default.createElement("div", { "data-testid": "centerline_container", className: classes.centerLineContainer, role: "presentation", ref: ref, style: {
-            left: "".concat(startingPosition, "px"),
+            left: `${startingPosition}px`,
             width: Math.max(1 / bpPerPx, 1),
         } }, centerLineInfo && (react_1.default.createElement("div", { "data-testid": "centerline_text", className: classes.centerLineText, role: "presentation", style: {
             left: Math.max(1 / bpPerPx, 1) + 5,

package/dist/LinearGenomeView/components/CenterLine.js.map

@@ -1 +1 @@
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+{"version":3,"file":"CenterLine.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/CenterLine.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+CAAqC;AACrC,uCAA0C;AAC1C,2CAAqC;AAKrC,MAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,GAAG,EAAE,CAAC,CAAC;IACpC,mBAAmB,EAAE;QACnB,UAAU,EAAE,aAAa;QACzB,MAAM,EAAE,MAAM;QACd,MAAM,EAAE,CAAC;QACT,QAAQ,EAAE,UAAU;QACpB,MAAM,EAAE,kBAAkB;QAC1B,SAAS,EAAE,MAAM;QACjB,YAAY,EAAE,MAAM;QACpB,aAAa,EAAE,MAAM;KACtB;IACD,cAAc,EAAE;QACd,QAAQ,EAAE,UAAU;QACpB,aAAa,EAAE,MAAM;QACrB,UAAU,EAAE,QAAQ;QACpB,UAAU,EAAE,MAAM;KACnB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,UAAU,CAAC,EAAE,KAAK,EAAkB;IAC3C,MAAM,EAAE,OAAO,EAAE,cAAc,EAAE,YAAY,EAAE,MAAM,EAAE,KAAK,EAAE,GAAG,KAAK,CAAA;IACtE,MAAM,GAAG,GAAG,IAAA,cAAM,EAAiB,IAAI,CAAC,CAAA;IACxC,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,gBAAgB,GAAG,KAAK,GAAG,CAAC,CAAA;IAElC,OAAO,MAAM,CAAC,MAAM,CAAC,CAAC,CAAC,CACrB,sDACc,sBAAsB,EAClC,SAAS,EAAE,OAAO,CAAC,mBAAmB,EACtC,IAAI,EAAC,cAAc,EACnB,GAAG,EAAE,GAAG,EACR,KAAK,EAAE;YACL,IAAI,EAAE,GAAG,gBAAgB,IAAI;YAC7B,KAAK,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,OAAO,EAAE,CAAC,CAAC;SAChC,IAEA,cAAc,IAAI,CACjB,sDAGc,iBAAiB,EAC7B,SAAS,EAAE,OAAO,CAAC,cAAc,EACjC,IAAI,EAAC,cAAc,EACnB,KAAK,EAAE;YACL,IAAI,EAAE,IAAI,CAAC,GAAG,CAAC,CAAC,GAAG,OAAO,EAAE,CAAC,CAAC,GAAG,CAAC;YAClC,GAAG,EAAE,YAAY;SAClB;QAGA,cAAc,CAAC,OAAO;;QAAG,GAAG;QAC5B,IAAI,CAAC,GAAG,CAAC,IAAI,CAAC,KAAK,CAAC,cAAc,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC,CAC/C,CACP,CACG,CACP,CAAC,CAAC,CAAC,IAAI,CAAA;AACV,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,UAAU,CAAC,CAAA"}

package/dist/LinearGenomeView/components/ExportSvgDialog.js

@@ -22,90 +22,36 @@ var __importStar = (this && this.__importStar) || function (mod) {
     __setModuleDefault(result, mod);
     return result;
 };
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-var __generator = (this && this.__generator) || function (thisArg, body) {
-    var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
-    return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
-    function verb(n) { return function (v) { return step([n, v]); }; }
-    function step(op) {
-        if (f) throw new TypeError("Generator is already executing.");
-        while (_) try {
-            if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
-            if (y = 0, t) op = [op[0] & 2, t.value];
-            switch (op[0]) {
-                case 0: case 1: t = op; break;
-                case 4: _.label++; return { value: op[1], done: false };
-                case 5: _.label++; y = op[1]; op = [0]; continue;
-                case 7: op = _.ops.pop(); _.trys.pop(); continue;
-                default:
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-                    if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
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-            }
-            op = body.call(thisArg, _);
-        } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
-        if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
-    }
-};
-var __read = (this && this.__read) || function (o, n) {
-    var m = typeof Symbol === "function" && o[Symbol.iterator];
-    if (!m) return o;
-    var i = m.call(o), r, ar = [], e;
-    try {
-        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
-    }
-    catch (error) { e = { error: error }; }
-    finally {
-        try {
-            if (r && !r.done && (m = i["return"])) m.call(i);
-        }
-        finally { if (e) throw e.error; }
-    }
-    return ar;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var react_1 = __importStar(require("react"));
-var mui_1 = require("tss-react/mui");
-var material_1 = require("@mui/material");
-var ui_1 = require("@jbrowse/core/ui");
-var Close_1 = __importDefault(require("@mui/icons-material/Close"));
-var useStyles = (0, mui_1.makeStyles)()(function (theme) { return ({
+const react_1 = __importStar(require("react"));
+const mui_1 = require("tss-react/mui");
+const material_1 = require("@mui/material");
+const ui_1 = require("@jbrowse/core/ui");
+const Close_1 = __importDefault(require("@mui/icons-material/Close"));
+const useStyles = (0, mui_1.makeStyles)()(theme => ({
     closeButton: {
         position: 'absolute',
         right: theme.spacing(1),
         top: theme.spacing(1),
         color: theme.palette.grey[500],
     },
-}); });
+}));
 function LoadingMessage() {
     return (react_1.default.createElement("div", null,
         react_1.default.createElement(material_1.CircularProgress, { size: 20, style: { marginRight: 20 } }),
         react_1.default.createElement(material_1.Typography, { display: "inline" }, "Creating SVG")));
 }
-function ExportSvgDlg(_a) {
-    var _this = this;
-    var model = _a.model, handleClose = _a.handleClose;
+function ExportSvgDlg({ model, handleClose, }) {
     // @ts-ignore
-    var offscreenCanvas = typeof OffscreenCanvas !== 'undefined';
-    var _b = __read((0, react_1.useState)(offscreenCanvas), 2), rasterizeLayers = _b[0], setRasterizeLayers = _b[1];
-    var _c = __read((0, react_1.useState)(false), 2), loading = _c[0], setLoading = _c[1];
-    var _d = __read((0, react_1.useState)('jbrowse.svg'), 2), filename = _d[0], setFilename = _d[1];
-    var _e = __read((0, react_1.useState)(), 2), error = _e[0], setError = _e[1];
-    var classes = useStyles().classes;
+    const offscreenCanvas = typeof OffscreenCanvas !== 'undefined';
+    const [rasterizeLayers, setRasterizeLayers] = (0, react_1.useState)(offscreenCanvas);
+    const [loading, setLoading] = (0, react_1.useState)(false);
+    const [filename, setFilename] = (0, react_1.useState)('jbrowse.svg');
+    const [error, setError] = (0, react_1.useState)();
+    const { classes } = useStyles();
     return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: handleClose },
         react_1.default.createElement(material_1.DialogTitle, null,
             "Export SVG",
@@ -113,35 +59,23 @@ function ExportSvgDlg(_a) {
                 react_1.default.createElement(Close_1.default, null))),
         react_1.default.createElement(material_1.DialogContent, null,
             error ? (react_1.default.createElement(ui_1.ErrorMessage, { error: error })) : loading ? (react_1.default.createElement(LoadingMessage, null)) : null,
-            react_1.default.createElement(material_1.TextField, { helperText: "filename", value: filename, onChange: function (event) { return setFilename(event.target.value); } }),
-            offscreenCanvas ? (react_1.default.createElement(material_1.FormControlLabel, { control: react_1.default.createElement(material_1.Checkbox, { checked: rasterizeLayers, onChange: function () { return setRasterizeLayers(function (val) { return !val; }); } }), label: "Rasterize canvas based tracks? File may be much larger if this is turned off" })) : (react_1.default.createElement(material_1.Typography, null, "Note: rasterizing layers not yet supported in this browser, so SVG size may be large"))),
+            react_1.default.createElement(material_1.TextField, { helperText: "filename", value: filename, onChange: event => setFilename(event.target.value) }),
+            offscreenCanvas ? (react_1.default.createElement(material_1.FormControlLabel, { control: react_1.default.createElement(material_1.Checkbox, { checked: rasterizeLayers, onChange: () => setRasterizeLayers(val => !val) }), label: "Rasterize canvas based tracks? File may be much larger if this is turned off" })) : (react_1.default.createElement(material_1.Typography, null, "Note: rasterizing layers not yet supported in this browser, so SVG size may be large"))),
         react_1.default.createElement(material_1.DialogActions, null,
-            react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: function () { return handleClose(); } }, "Cancel"),
-            react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", type: "submit", onClick: function () { return __awaiter(_this, void 0, void 0, function () {
-                    var e_1;
-                    return __generator(this, function (_a) {
-                        switch (_a.label) {
-                            case 0:
-                                setLoading(true);
-                                setError(undefined);
-                                _a.label = 1;
-                            case 1:
-                                _a.trys.push([1, 3, , 4]);
-                                return [4 /*yield*/, model.exportSvg({ rasterizeLayers: rasterizeLayers, filename: filename })];
-                            case 2:
-                                _a.sent();
-                                handleClose();
-                                return [3 /*break*/, 4];
-                            case 3:
-                                e_1 = _a.sent();
-                                console.error(e_1);
-                                setError(e_1);
-                                setLoading(false);
-                                return [3 /*break*/, 4];
-                            case 4: return [2 /*return*/];
-                        }
-                    });
-                }); } }, "Submit"))));
+            react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: () => handleClose() }, "Cancel"),
+            react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", type: "submit", onClick: async () => {
+                    setLoading(true);
+                    setError(undefined);
+                    try {
+                        await model.exportSvg({ rasterizeLayers, filename });
+                        handleClose();
+                    }
+                    catch (e) {
+                        console.error(e);
+                        setError(e);
+                        setLoading(false);
+                    }
+                } }, "Submit"))));
 }
 exports.default = ExportSvgDlg;
 //# sourceMappingURL=ExportSvgDialog.js.map

package/dist/LinearGenomeView/components/ExportSvgDialog.js.map

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package/dist/LinearGenomeView/components/GetSequenceDialog.d.ts

@@ -0,0 +1,9 @@
+/// <reference types="react" />
+import { LinearGenomeViewModel } from '..';
+declare type LGV = LinearGenomeViewModel;
+declare function SequenceDialog({ model, handleClose, }: {
+    model: LGV;
+    handleClose: () => void;
+}): JSX.Element;
+declare const _default: typeof SequenceDialog;
+export default _default;