@jbrowse/plugin-linear-genome-view 1.7.10 → 2.0.1

package/esm/LinearGenomeView/index.js.map

@@ -0,0 +1 @@
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package/esm/LinearGenomeView/util.d.ts

@@ -0,0 +1,14 @@
+/**
+ * Given a scale ( bp/px ) and minimum distances (px) between major and minor
+ * gridlines, return an object like `{ majorPitch: bp, minorPitch: bp }` giving
+ * the gridline pitches to use.
+ */
+export declare function chooseGridPitch(scale: number, minMajorPitchPx: number, minMinorPitchPx: number): {
+    majorPitch: number;
+    minorPitch: number;
+};
+export declare function makeTicks(start: number, end: number, bpPerPx: number, emitMajor?: boolean, emitMinor?: boolean): {
+    type: string;
+    base: number;
+    index: number;
+}[];

package/esm/LinearGenomeView/util.js

@@ -0,0 +1,62 @@
+/**
+ * Given a scale ( bp/px ) and minimum distances (px) between major and minor
+ * gridlines, return an object like `{ majorPitch: bp, minorPitch: bp }` giving
+ * the gridline pitches to use.
+ */
+export function chooseGridPitch(scale, minMajorPitchPx, minMinorPitchPx) {
+    scale = Math.abs(scale);
+    const minMajorPitchBp = minMajorPitchPx * scale;
+    const majorMagnitude = parseInt(Number(minMajorPitchBp).toExponential().split(/e/i)[1], 10);
+    let majorPitch = 10 ** majorMagnitude;
+    while (majorPitch < minMajorPitchBp) {
+        majorPitch *= 2;
+        if (majorPitch >= minMajorPitchBp) {
+            break;
+        }
+        majorPitch *= 2.5;
+    }
+    majorPitch = Math.max(majorPitch, 5);
+    const majorPitchPx = majorPitch / scale;
+    let minorPitch = 0;
+    if (!(majorPitch % 10) && majorPitchPx / 10 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 10;
+    }
+    else if (!(majorPitch % 5) && majorPitchPx / 5 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 5;
+    }
+    else if (!(majorPitch % 2) && majorPitchPx / 2 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 2;
+    }
+    return { majorPitch, minorPitch };
+}
+export function makeTicks(start, end, bpPerPx, emitMajor = true, emitMinor = true) {
+    const gridPitch = chooseGridPitch(bpPerPx, 60, 15);
+    let minBase = start;
+    let maxBase = end;
+    if (minBase === null || maxBase === null) {
+        return [];
+    }
+    if (bpPerPx < 0) {
+        ;
+        [minBase, maxBase] = [maxBase, minBase];
+    }
+    // add 20px additional on the right and left to allow us to draw the ends
+    // of labels that lie a little outside our region
+    minBase -= Math.abs(20 * bpPerPx) - 1;
+    maxBase += Math.abs(20 * bpPerPx) + 1;
+    const iterPitch = gridPitch.minorPitch || gridPitch.majorPitch;
+    let index = 0;
+    const ticks = [];
+    for (let base = Math.ceil(minBase / iterPitch) * iterPitch; base < maxBase; base += iterPitch) {
+        if (emitMinor && base % (gridPitch.majorPitch * 2)) {
+            ticks.push({ type: 'minor', base: base - 1, index });
+            index += 1;
+        }
+        else if (emitMajor && !(base % (gridPitch.majorPitch * 2))) {
+            ticks.push({ type: 'major', base: base - 1, index });
+            index += 1;
+        }
+    }
+    return ticks;
+}
+//# sourceMappingURL=util.js.map

package/esm/LinearGenomeView/util.js.map

@@ -0,0 +1 @@
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