@jbrowse/plugin-linear-genome-view 1.7.10 → 2.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +119 -139
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -0
- package/dist/BaseLinearDisplay/components/Block.js +53 -74
- package/dist/BaseLinearDisplay/components/Block.js.map +1 -0
- package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +11 -1
- package/dist/BaseLinearDisplay/components/LinearBlocks.js +64 -103
- package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +1 -0
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +145 -175
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +1 -0
- package/dist/BaseLinearDisplay/components/Tooltip.js +109 -116
- package/dist/BaseLinearDisplay/components/Tooltip.js.map +1 -0
- package/dist/BaseLinearDisplay/index.js +13 -40
- package/dist/BaseLinearDisplay/index.js.map +1 -0
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +20 -15
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +605 -684
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -0
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js +15 -22
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +1 -0
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +7 -8
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +266 -312
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -0
- package/dist/LinearBareDisplay/configSchema.js +11 -17
- package/dist/LinearBareDisplay/configSchema.js.map +1 -0
- package/dist/LinearBareDisplay/index.js +7 -20
- package/dist/LinearBareDisplay/index.js.map +1 -0
- package/dist/LinearBareDisplay/model.d.ts +16 -14
- package/dist/LinearBareDisplay/model.js +36 -42
- package/dist/LinearBareDisplay/model.js.map +1 -0
- package/dist/LinearBasicDisplay/components/SetMaxHeight.d.ts +1 -1
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js +76 -85
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -0
- package/dist/LinearBasicDisplay/configSchema.js +15 -23
- package/dist/LinearBasicDisplay/configSchema.js.map +1 -0
- package/dist/LinearBasicDisplay/index.js +10 -22
- package/dist/LinearBasicDisplay/index.js.map +1 -0
- package/dist/LinearBasicDisplay/model.d.ts +20 -15
- package/dist/LinearBasicDisplay/model.js +180 -159
- package/dist/LinearBasicDisplay/model.js.map +1 -0
- package/dist/LinearGenomeView/components/CenterLine.d.ts +2 -8
- package/dist/LinearGenomeView/components/CenterLine.js +60 -74
- package/dist/LinearGenomeView/components/CenterLine.js.map +1 -0
- package/dist/LinearGenomeView/components/ExportSvgDialog.js +141 -141
- package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/Gridlines.d.ts +8 -0
- package/dist/LinearGenomeView/components/Gridlines.js +78 -0
- package/dist/LinearGenomeView/components/Gridlines.js.map +1 -0
- package/dist/LinearGenomeView/components/Header.js +70 -126
- package/dist/LinearGenomeView/components/Header.js.map +1 -0
- package/dist/LinearGenomeView/components/HelpDialog.d.ts +0 -1
- package/dist/LinearGenomeView/components/HelpDialog.js +62 -44
- package/dist/LinearGenomeView/components/HelpDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/ImportForm.js +223 -320
- package/dist/LinearGenomeView/components/ImportForm.js.map +1 -0
- package/dist/LinearGenomeView/components/LinearGenomeView.js +64 -124
- package/dist/LinearGenomeView/components/LinearGenomeView.js.map +1 -0
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js +198 -337
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -0
- package/dist/LinearGenomeView/components/MiniControls.js +64 -78
- package/dist/LinearGenomeView/components/MiniControls.js.map +1 -0
- package/dist/LinearGenomeView/components/OverviewRubberBand.js +229 -293
- package/dist/LinearGenomeView/components/OverviewRubberBand.js.map +1 -0
- package/dist/LinearGenomeView/components/OverviewScaleBar.d.ts +24 -8
- package/dist/LinearGenomeView/components/OverviewScaleBar.js +277 -365
- package/dist/LinearGenomeView/components/OverviewScaleBar.js.map +1 -0
- package/dist/LinearGenomeView/components/RefNameAutocomplete.d.ts +1 -1
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js +237 -324
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -0
- package/dist/LinearGenomeView/components/RubberBand.js +228 -296
- package/dist/LinearGenomeView/components/RubberBand.js.map +1 -0
- package/dist/LinearGenomeView/components/Ruler.js +45 -90
- package/dist/LinearGenomeView/components/Ruler.js.map +1 -0
- package/dist/LinearGenomeView/components/ScaleBar.d.ts +8 -403
- package/dist/LinearGenomeView/components/ScaleBar.js +121 -172
- package/dist/LinearGenomeView/components/ScaleBar.js.map +1 -0
- package/dist/LinearGenomeView/components/SearchBox.js +158 -205
- package/dist/LinearGenomeView/components/SearchBox.js.map +1 -0
- package/dist/LinearGenomeView/components/SearchResultsDialog.d.ts +0 -1
- package/dist/LinearGenomeView/components/SearchResultsDialog.js +105 -150
- package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/SequenceDialog.js +219 -272
- package/dist/LinearGenomeView/components/SequenceDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/TrackContainer.js +116 -156
- package/dist/LinearGenomeView/components/TrackContainer.js.map +1 -0
- package/dist/LinearGenomeView/components/TrackLabel.d.ts +6 -42
- package/dist/LinearGenomeView/components/TrackLabel.js +115 -134
- package/dist/LinearGenomeView/components/TrackLabel.js.map +1 -0
- package/dist/LinearGenomeView/components/TracksContainer.d.ts +1 -1
- package/dist/LinearGenomeView/components/TracksContainer.js +172 -199
- package/dist/LinearGenomeView/components/TracksContainer.js.map +1 -0
- package/dist/LinearGenomeView/components/ZoomControls.js +72 -87
- package/dist/LinearGenomeView/components/ZoomControls.js.map +1 -0
- package/dist/LinearGenomeView/components/util.d.ts +12 -0
- package/dist/LinearGenomeView/components/util.js +95 -13
- package/dist/LinearGenomeView/components/util.js.map +1 -0
- package/dist/LinearGenomeView/index.d.ts +64 -77
- package/dist/LinearGenomeView/index.js +1035 -1412
- package/dist/LinearGenomeView/index.js.map +1 -0
- package/dist/LinearGenomeView/util.js +76 -83
- package/dist/LinearGenomeView/util.js.map +1 -0
- package/dist/index.d.ts +101 -51
- package/dist/index.js +225 -295
- package/dist/index.js.map +1 -0
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +9 -0
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +68 -0
- package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -0
- package/esm/BaseLinearDisplay/components/Block.d.ts +15 -0
- package/esm/BaseLinearDisplay/components/Block.js +46 -0
- package/esm/BaseLinearDisplay/components/Block.js.map +1 -0
- package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +22 -0
- package/esm/BaseLinearDisplay/components/LinearBlocks.js +62 -0
- package/esm/BaseLinearDisplay/components/LinearBlocks.js.map +1 -0
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +4 -0
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +113 -0
- package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +1 -0
- package/esm/BaseLinearDisplay/components/Tooltip.d.ts +8 -0
- package/esm/BaseLinearDisplay/components/Tooltip.js +64 -0
- package/esm/BaseLinearDisplay/components/Tooltip.js.map +1 -0
- package/esm/BaseLinearDisplay/index.d.ts +5 -0
- package/esm/BaseLinearDisplay/index.js +4 -0
- package/esm/BaseLinearDisplay/index.js.map +1 -0
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +232 -0
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +541 -0
- package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -0
- package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.d.ts +1 -0
- package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js +14 -0
- package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +1 -0
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +96 -0
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +225 -0
- package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -0
- package/esm/LinearBareDisplay/configSchema.d.ts +2 -0
- package/esm/LinearBareDisplay/configSchema.js +9 -0
- package/esm/LinearBareDisplay/configSchema.js.map +1 -0
- package/esm/LinearBareDisplay/index.d.ts +2 -0
- package/esm/LinearBareDisplay/index.js +3 -0
- package/esm/LinearBareDisplay/index.js.map +1 -0
- package/esm/LinearBareDisplay/model.d.ts +194 -0
- package/esm/LinearBareDisplay/model.js +28 -0
- package/esm/LinearBareDisplay/model.js.map +1 -0
- package/esm/LinearBasicDisplay/components/SetMaxHeight.d.ts +10 -0
- package/esm/LinearBasicDisplay/components/SetMaxHeight.js +40 -0
- package/esm/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -0
- package/esm/LinearBasicDisplay/configSchema.d.ts +2 -0
- package/esm/LinearBasicDisplay/configSchema.js +14 -0
- package/esm/LinearBasicDisplay/configSchema.js.map +1 -0
- package/esm/LinearBasicDisplay/index.d.ts +2 -0
- package/esm/LinearBasicDisplay/index.js +3 -0
- package/esm/LinearBasicDisplay/index.js.map +1 -0
- package/esm/LinearBasicDisplay/model.d.ts +218 -0
- package/esm/LinearBasicDisplay/model.js +127 -0
- package/esm/LinearBasicDisplay/model.js.map +1 -0
- package/esm/LinearGenomeView/components/CenterLine.d.ts +8 -0
- package/esm/LinearGenomeView/components/CenterLine.js +40 -0
- package/esm/LinearGenomeView/components/CenterLine.js.map +1 -0
- package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +6 -0
- package/esm/LinearGenomeView/components/ExportSvgDialog.js +52 -0
- package/esm/LinearGenomeView/components/ExportSvgDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/Gridlines.d.ts +8 -0
- package/esm/LinearGenomeView/components/Gridlines.js +71 -0
- package/esm/LinearGenomeView/components/Gridlines.js.map +1 -0
- package/esm/LinearGenomeView/components/Header.d.ts +7 -0
- package/esm/LinearGenomeView/components/Header.js +81 -0
- package/esm/LinearGenomeView/components/Header.js.map +1 -0
- package/esm/LinearGenomeView/components/HelpDialog.d.ts +4 -0
- package/esm/LinearGenomeView/components/HelpDialog.js +58 -0
- package/esm/LinearGenomeView/components/HelpDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/ImportForm.d.ts +7 -0
- package/esm/LinearGenomeView/components/ImportForm.js +141 -0
- package/esm/LinearGenomeView/components/ImportForm.js.map +1 -0
- package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +7 -0
- package/esm/LinearGenomeView/components/LinearGenomeView.js +67 -0
- package/esm/LinearGenomeView/components/LinearGenomeView.js.map +1 -0
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.d.ts +4 -0
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js +132 -0
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -0
- package/esm/LinearGenomeView/components/MiniControls.d.ts +6 -0
- package/esm/LinearGenomeView/components/MiniControls.js +25 -0
- package/esm/LinearGenomeView/components/MiniControls.js.map +1 -0
- package/esm/LinearGenomeView/components/OverviewRubberBand.d.ts +22 -0
- package/esm/LinearGenomeView/components/OverviewRubberBand.js +197 -0
- package/esm/LinearGenomeView/components/OverviewRubberBand.js.map +1 -0
- package/esm/LinearGenomeView/components/OverviewScaleBar.d.ts +148 -0
- package/esm/LinearGenomeView/components/OverviewScaleBar.js +287 -0
- package/esm/LinearGenomeView/components/OverviewScaleBar.js.map +1 -0
- package/esm/LinearGenomeView/components/RefNameAutocomplete.d.ts +22 -0
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js +136 -0
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -0
- package/esm/LinearGenomeView/components/RubberBand.d.ts +9 -0
- package/esm/LinearGenomeView/components/RubberBand.js +197 -0
- package/esm/LinearGenomeView/components/RubberBand.js.map +1 -0
- package/esm/LinearGenomeView/components/Ruler.d.ts +27 -0
- package/esm/LinearGenomeView/components/Ruler.js +50 -0
- package/esm/LinearGenomeView/components/Ruler.js.map +1 -0
- package/esm/LinearGenomeView/components/ScaleBar.d.ts +10 -0
- package/esm/LinearGenomeView/components/ScaleBar.js +112 -0
- package/esm/LinearGenomeView/components/ScaleBar.js.map +1 -0
- package/esm/LinearGenomeView/components/SearchBox.d.ts +8 -0
- package/esm/LinearGenomeView/components/SearchBox.js +94 -0
- package/esm/LinearGenomeView/components/SearchBox.js.map +1 -0
- package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +7 -0
- package/esm/LinearGenomeView/components/SearchResultsDialog.js +107 -0
- package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/SequenceDialog.d.ts +8 -0
- package/esm/LinearGenomeView/components/SequenceDialog.js +147 -0
- package/esm/LinearGenomeView/components/SequenceDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/TrackContainer.d.ts +9 -0
- package/esm/LinearGenomeView/components/TrackContainer.js +109 -0
- package/esm/LinearGenomeView/components/TrackContainer.js.map +1 -0
- package/esm/LinearGenomeView/components/TrackLabel.d.ts +8 -0
- package/esm/LinearGenomeView/components/TrackLabel.js +89 -0
- package/esm/LinearGenomeView/components/TrackLabel.js.map +1 -0
- package/{dist/LinearGenomeView/components/VerticalGuides.d.ts → esm/LinearGenomeView/components/TracksContainer.d.ts} +4 -3
- package/esm/LinearGenomeView/components/TracksContainer.js +142 -0
- package/esm/LinearGenomeView/components/TracksContainer.js.map +1 -0
- package/esm/LinearGenomeView/components/ZoomControls.d.ts +7 -0
- package/esm/LinearGenomeView/components/ZoomControls.js +32 -0
- package/esm/LinearGenomeView/components/ZoomControls.js.map +1 -0
- package/esm/LinearGenomeView/components/util.d.ts +14 -0
- package/esm/LinearGenomeView/components/util.js +17 -0
- package/esm/LinearGenomeView/components/util.js.map +1 -0
- package/esm/LinearGenomeView/index.d.ts +275 -0
- package/esm/LinearGenomeView/index.js +978 -0
- package/esm/LinearGenomeView/index.js.map +1 -0
- package/esm/LinearGenomeView/util.d.ts +14 -0
- package/esm/LinearGenomeView/util.js +62 -0
- package/esm/LinearGenomeView/util.js.map +1 -0
- package/esm/index.d.ts +615 -0
- package/esm/index.js +127 -0
- package/esm/index.js.map +1 -0
- package/package.json +22 -15
- package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +4 -3
- package/src/BaseLinearDisplay/components/Block.tsx +5 -5
- package/src/BaseLinearDisplay/components/LinearBlocks.tsx +4 -4
- package/src/BaseLinearDisplay/components/ServerSideRenderedBlockContent.tsx +7 -8
- package/src/BaseLinearDisplay/components/Tooltip.tsx +14 -4
- package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +6 -4
- package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +1 -1
- package/src/LinearBasicDisplay/components/SetMaxHeight.tsx +10 -7
- package/src/LinearBasicDisplay/model.ts +21 -15
- package/src/LinearGenomeView/components/CenterLine.tsx +6 -11
- package/src/LinearGenomeView/components/ExportSvgDialog.tsx +5 -5
- package/src/LinearGenomeView/components/{VerticalGuides.tsx → Gridlines.tsx} +9 -11
- package/src/LinearGenomeView/components/Header.tsx +13 -18
- package/src/LinearGenomeView/components/HelpDialog.tsx +5 -5
- package/src/LinearGenomeView/components/ImportForm.tsx +24 -37
- package/src/LinearGenomeView/components/LinearGenomeView.test.js +16 -6
- package/src/LinearGenomeView/components/LinearGenomeView.tsx +4 -3
- package/src/LinearGenomeView/components/MiniControls.tsx +29 -40
- package/src/LinearGenomeView/components/OverviewRubberBand.tsx +20 -29
- package/src/LinearGenomeView/components/OverviewScaleBar.tsx +100 -89
- package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +13 -44
- package/src/LinearGenomeView/components/RubberBand.tsx +12 -18
- package/src/LinearGenomeView/components/Ruler.tsx +5 -11
- package/src/LinearGenomeView/components/ScaleBar.tsx +23 -27
- package/src/LinearGenomeView/components/SearchBox.tsx +22 -32
- package/src/LinearGenomeView/components/SearchResultsDialog.tsx +7 -7
- package/src/LinearGenomeView/components/SequenceDialog.tsx +10 -10
- package/src/LinearGenomeView/components/TrackContainer.tsx +12 -12
- package/src/LinearGenomeView/components/TrackLabel.tsx +21 -31
- package/src/LinearGenomeView/components/TracksContainer.tsx +10 -15
- package/src/LinearGenomeView/components/ZoomControls.tsx +12 -13
- package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.js.snap +500 -547
- package/src/LinearGenomeView/components/util.ts +43 -0
- package/src/LinearGenomeView/index.test.ts +14 -36
- package/src/LinearGenomeView/index.tsx +390 -564
- package/src/index.ts +1 -1
- package/dist/LinearBareDisplay/index.test.js +0 -33
- package/dist/LinearGenomeView/components/LinearGenomeView.test.js +0 -234
- package/dist/LinearGenomeView/components/ScaleBar.test.js +0 -180
- package/dist/LinearGenomeView/components/VerticalGuides.js +0 -116
- package/dist/LinearGenomeView/index.test.js +0 -1187
- package/dist/LinearGenomeView/util.test.js +0 -78
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}, /*#__PURE__*/_react.default.createElement(_Close.default, null)) : null), /*#__PURE__*/_react.default.createElement(_core.Divider, null), /*#__PURE__*/_react.default.createElement(_core.DialogContent, null, /*#__PURE__*/_react.default.createElement("h3", null, "Searching"), /*#__PURE__*/_react.default.createElement("ul", null, /*#__PURE__*/_react.default.createElement("li", null, "Jump to a feature or reference sequence by typing its name in the location box and pressing Enter."), /*#__PURE__*/_react.default.createElement("li", null, "Jump to a specific region by typing the region into the location box as: ", /*#__PURE__*/_react.default.createElement("code", null, "ref:start..end"), " or ", /*#__PURE__*/_react.default.createElement("code", null, "ref:start-end"), ". Commas are allowed in the start and end coordinates. A space-separated list of locstrings can be used to open up multiple chromosomes at a time")), /*#__PURE__*/_react.default.createElement("h3", null, "Example Searches"), /*#__PURE__*/_react.default.createElement("ul", null, /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "BRCA"), " - searches for the feature named BRCA"), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr4"), " - jumps to chromosome 4"), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr4:79,500,000..80,000,000"), " - jumps the region on chromosome 4 between 79.5Mb and 80Mb."), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr1:1-100 chr2:1-100"), " - create a split view of chr1:1-100 and chr2:1-100"), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr1 chr2 chr3"), " - open up multiple chromosomes at once"), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr1:1-100[rev] chr2:1-100"), " - open up the first region in the horizontally flipped orientation"), /*#__PURE__*/_react.default.createElement("li", null, /*#__PURE__*/_react.default.createElement("code", null, "chr1 100 200"), " - use whitespace separated refname, start, end"))), /*#__PURE__*/_react.default.createElement(_core.Divider, null), /*#__PURE__*/_react.default.createElement(_core.DialogActions, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
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onClick: function onClick() {
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return handleClose();
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position: 'absolute',
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right: theme.spacing(1),
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top: theme.spacing(1),
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color: theme.palette.grey[500],
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}); });
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function HelpDialog(_a) {
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var handleClose = _a.handleClose;
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var classes = useStyles().classes;
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return (react_1.default.createElement(material_1.Dialog, { open: true, maxWidth: "xl", onClose: handleClose },
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react_1.default.createElement(material_1.DialogTitle, null,
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"Using the search box",
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handleClose ? (react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: function () { return handleClose(); } },
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react_1.default.createElement(Close_1.default, null))) : null),
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react_1.default.createElement(material_1.Divider, null),
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react_1.default.createElement(material_1.DialogContent, null,
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react_1.default.createElement("h3", null, "Searching"),
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react_1.default.createElement("ul", null,
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react_1.default.createElement("li", null, "Jump to a feature or reference sequence by typing its name in the location box and pressing Enter."),
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react_1.default.createElement("li", null,
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"Jump to a specific region by typing the region into the location box as: ",
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react_1.default.createElement("code", null, "ref:start..end"),
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" or ",
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react_1.default.createElement("code", null, "ref:start-end"),
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". Commas are allowed in the start and end coordinates. A space-separated list of locstrings can be used to open up multiple chromosomes at a time")),
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react_1.default.createElement("h3", null, "Example Searches"),
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react_1.default.createElement("ul", null,
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "BRCA"),
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" - searches for the feature named BRCA"),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr4"),
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" - jumps to chromosome 4"),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr4:79,500,000..80,000,000"),
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" - jumps the region on chromosome 4 between 79.5Mb and 80Mb."),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr1:1-100 chr2:1-100"),
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" - create a split view of chr1:1-100 and chr2:1-100"),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr1 chr2 chr3"),
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" - open up multiple chromosomes at once"),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr1:1-100[rev] chr2:1-100"),
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" - open up the first region in the horizontally flipped orientation"),
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react_1.default.createElement("li", null,
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react_1.default.createElement("code", null, "chr1 100 200"),
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" - use whitespace separated refname, start, end"))),
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react_1.default.createElement(material_1.Divider, null),
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react_1.default.createElement(material_1.DialogActions, null,
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react_1.default.createElement(material_1.Button, { onClick: function () { return handleClose(); }, color: "primary" }, "Close"))));
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}
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exports.default = HelpDialog;
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//# sourceMappingURL=HelpDialog.js.map
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