@jbrowse/plugin-linear-genome-view 1.7.10 → 2.0.1

package/dist/LinearGenomeView/index.js.map

@@ -0,0 +1 @@
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package/dist/LinearGenomeView/util.js

@@ -1,93 +1,86 @@
 "use strict";
-
-Object.defineProperty(exports, "__esModule", {
-  value: true
-});
-exports.chooseGridPitch = chooseGridPitch;
-exports.makeTicks = makeTicks;
-
+var __read = (this && this.__read) || function (o, n) {
+    var m = typeof Symbol === "function" && o[Symbol.iterator];
+    if (!m) return o;
+    var i = m.call(o), r, ar = [], e;
+    try {
+        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
+    }
+    catch (error) { e = { error: error }; }
+    finally {
+        try {
+            if (r && !r.done && (m = i["return"])) m.call(i);
+        }
+        finally { if (e) throw e.error; }
+    }
+    return ar;
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.makeTicks = exports.chooseGridPitch = void 0;
 /**
  * Given a scale ( bp/px ) and minimum distances (px) between major and minor
  * gridlines, return an object like `{ majorPitch: bp, minorPitch: bp }` giving
  * the gridline pitches to use.
  */
 function chooseGridPitch(scale, minMajorPitchPx, minMinorPitchPx) {
-  scale = Math.abs(scale);
-  var minMajorPitchBp = minMajorPitchPx * scale;
-  var majorMagnitude = parseInt(Number(minMajorPitchBp).toExponential().split(/e/i)[1], 10);
-  var majorPitch = Math.pow(10, majorMagnitude);
-
-  while (majorPitch < minMajorPitchBp) {
-    majorPitch *= 2;
-
-    if (majorPitch >= minMajorPitchBp) {
-      break;
+    scale = Math.abs(scale);
+    var minMajorPitchBp = minMajorPitchPx * scale;
+    var majorMagnitude = parseInt(Number(minMajorPitchBp).toExponential().split(/e/i)[1], 10);
+    var majorPitch = Math.pow(10, majorMagnitude);
+    while (majorPitch < minMajorPitchBp) {
+        majorPitch *= 2;
+        if (majorPitch >= minMajorPitchBp) {
+            break;
+        }
+        majorPitch *= 2.5;
+    }
+    majorPitch = Math.max(majorPitch, 5);
+    var majorPitchPx = majorPitch / scale;
+    var minorPitch = 0;
+    if (!(majorPitch % 10) && majorPitchPx / 10 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 10;
+    }
+    else if (!(majorPitch % 5) && majorPitchPx / 5 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 5;
     }
-
-    majorPitch *= 2.5;
-  }
-
-  majorPitch = Math.max(majorPitch, 5);
-  var majorPitchPx = majorPitch / scale;
-  var minorPitch = 0;
-
-  if (!(majorPitch % 10) && majorPitchPx / 10 >= minMinorPitchPx) {
-    minorPitch = majorPitch / 10;
-  } else if (!(majorPitch % 5) && majorPitchPx / 5 >= minMinorPitchPx) {
-    minorPitch = majorPitch / 5;
-  } else if (!(majorPitch % 2) && majorPitchPx / 2 >= minMinorPitchPx) {
-    minorPitch = majorPitch / 2;
-  }
-
-  return {
-    majorPitch: majorPitch,
-    minorPitch: minorPitch
-  };
+    else if (!(majorPitch % 2) && majorPitchPx / 2 >= minMinorPitchPx) {
+        minorPitch = majorPitch / 2;
+    }
+    return { majorPitch: majorPitch, minorPitch: minorPitch };
 }
-
-function makeTicks(start, end, bpPerPx) {
-  var emitMajor = arguments.length > 3 && arguments[3] !== undefined ? arguments[3] : true;
-  var emitMinor = arguments.length > 4 && arguments[4] !== undefined ? arguments[4] : true;
-  var gridPitch = chooseGridPitch(bpPerPx, 60, 15);
-  var minBase = start;
-  var maxBase = end;
-
-  if (minBase === null || maxBase === null) {
-    return [];
-  }
-
-  if (bpPerPx < 0) {
-    ;
-    var _ref = [maxBase, minBase];
-    minBase = _ref[0];
-    maxBase = _ref[1];
-  } // add 20px additional on the right and left to allow us to draw the ends
-  // of labels that lie a little outside our region
-
-
-  minBase -= Math.abs(20 * bpPerPx) - 1;
-  maxBase += Math.abs(20 * bpPerPx) + 1;
-  var iterPitch = gridPitch.minorPitch || gridPitch.majorPitch;
-  var index = 0;
-  var ticks = [];
-
-  for (var base = Math.ceil(minBase / iterPitch) * iterPitch; base < maxBase; base += iterPitch) {
-    if (emitMinor && base % (gridPitch.majorPitch * 2)) {
-      ticks.push({
-        type: 'minor',
-        base: base - 1,
-        index: index
-      });
-      index += 1;
-    } else if (emitMajor && !(base % (gridPitch.majorPitch * 2))) {
-      ticks.push({
-        type: 'major',
-        base: base - 1,
-        index: index
-      });
-      index += 1;
+exports.chooseGridPitch = chooseGridPitch;
+function makeTicks(start, end, bpPerPx, emitMajor, emitMinor) {
+    var _a;
+    if (emitMajor === void 0) { emitMajor = true; }
+    if (emitMinor === void 0) { emitMinor = true; }
+    var gridPitch = chooseGridPitch(bpPerPx, 60, 15);
+    var minBase = start;
+    var maxBase = end;
+    if (minBase === null || maxBase === null) {
+        return [];
+    }
+    if (bpPerPx < 0) {
+        ;
+        _a = __read([maxBase, minBase], 2), minBase = _a[0], maxBase = _a[1];
     }
-  }
-
-  return ticks;
-}
+    // add 20px additional on the right and left to allow us to draw the ends
+    // of labels that lie a little outside our region
+    minBase -= Math.abs(20 * bpPerPx) - 1;
+    maxBase += Math.abs(20 * bpPerPx) + 1;
+    var iterPitch = gridPitch.minorPitch || gridPitch.majorPitch;
+    var index = 0;
+    var ticks = [];
+    for (var base = Math.ceil(minBase / iterPitch) * iterPitch; base < maxBase; base += iterPitch) {
+        if (emitMinor && base % (gridPitch.majorPitch * 2)) {
+            ticks.push({ type: 'minor', base: base - 1, index: index });
+            index += 1;
+        }
+        else if (emitMajor && !(base % (gridPitch.majorPitch * 2))) {
+            ticks.push({ type: 'major', base: base - 1, index: index });
+            index += 1;
+        }
+    }
+    return ticks;
+}
+exports.makeTicks = makeTicks;
+//# sourceMappingURL=util.js.map

package/dist/LinearGenomeView/util.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"util.js","sourceRoot":"","sources":["../../src/LinearGenomeView/util.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;AAAA;;;;GAIG;AACH,SAAgB,eAAe,CAC7B,KAAa,EACb,eAAuB,EACvB,eAAuB;IAEvB,KAAK,GAAG,IAAI,CAAC,GAAG,CAAC,KAAK,CAAC,CAAA;IACvB,IAAM,eAAe,GAAG,eAAe,GAAG,KAAK,CAAA;IAC/C,IAAM,cAAc,GAAG,QAAQ,CAC7B,MAAM,CAAC,eAAe,CAAC,CAAC,aAAa,EAAE,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EACtD,EAAE,CACH,CAAA;IAED,IAAI,UAAU,GAAG,SAAA,EAAE,EAAI,cAAc,CAAA,CAAA;IACrC,OAAO,UAAU,GAAG,eAAe,EAAE;QACnC,UAAU,IAAI,CAAC,CAAA;QACf,IAAI,UAAU,IAAI,eAAe,EAAE;YACjC,MAAK;SACN;QACD,UAAU,IAAI,GAAG,CAAA;KAClB;IAED,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,CAAC,CAAC,CAAA;IAEpC,IAAM,YAAY,GAAG,UAAU,GAAG,KAAK,CAAA;IAEvC,IAAI,UAAU,GAAG,CAAC,CAAA;IAClB,IAAI,CAAC,CAAC,UAAU,GAAG,EAAE,CAAC,IAAI,YAAY,GAAG,EAAE,IAAI,eAAe,EAAE;QAC9D,UAAU,GAAG,UAAU,GAAG,EAAE,CAAA;KAC7B;SAAM,IAAI,CAAC,CAAC,UAAU,GAAG,CAAC,CAAC,IAAI,YAAY,GAAG,CAAC,IAAI,eAAe,EAAE;QACnE,UAAU,GAAG,UAAU,GAAG,CAAC,CAAA;KAC5B;SAAM,IAAI,CAAC,CAAC,UAAU,GAAG,CAAC,CAAC,IAAI,YAAY,GAAG,CAAC,IAAI,eAAe,EAAE;QACnE,UAAU,GAAG,UAAU,GAAG,CAAC,CAAA;KAC5B;IAED,OAAO,EAAE,UAAU,YAAA,EAAE,UAAU,YAAA,EAAE,CAAA;AACnC,CAAC;AAnCD,0CAmCC;AAED,SAAgB,SAAS,CACvB,KAAa,EACb,GAAW,EACX,OAAe,EACf,SAAgB,EAChB,SAAgB;;IADhB,0BAAA,EAAA,gBAAgB;IAChB,0BAAA,EAAA,gBAAgB;IAEhB,IAAM,SAAS,GAAG,eAAe,CAAC,OAAO,EAAE,EAAE,EAAE,EAAE,CAAC,CAAA;IAElD,IAAI,OAAO,GAAG,KAAK,CAAA;IACnB,IAAI,OAAO,GAAG,GAAG,CAAA;IACjB,IAAI,OAAO,KAAK,IAAI,IAAI,OAAO,KAAK,IAAI,EAAE;QACxC,OAAO,EAAE,CAAA;KACV;IAED,IAAI,OAAO,GAAG,CAAC,EAAE;QACf,CAAC;QAAA,KAAA,OAAqB,CAAC,OAAO,EAAE,OAAO,CAAC,IAAA,EAAtC,OAAO,QAAA,EAAE,OAAO,QAAA,CAAsB;KACzC;IAED,yEAAyE;IACzE,iDAAiD;IACjD,OAAO,IAAI,IAAI,CAAC,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC,GAAG,CAAC,CAAA;IACrC,OAAO,IAAI,IAAI,CAAC,GAAG,CAAC,EAAE,GAAG,OAAO,CAAC,GAAG,CAAC,CAAA;IAErC,IAAM,SAAS,GAAG,SAAS,CAAC,UAAU,IAAI,SAAS,CAAC,UAAU,CAAA;IAC9D,IAAI,KAAK,GAAG,CAAC,CAAA;IACb,IAAM,KAAK,GAAG,EAAE,CAAA;IAChB,KACE,IAAI,IAAI,GAAG,IAAI,CAAC,IAAI,CAAC,OAAO,GAAG,SAAS,CAAC,GAAG,SAAS,EACrD,IAAI,GAAG,OAAO,EACd,IAAI,IAAI,SAAS,EACjB;QACA,IAAI,SAAS,IAAI,IAAI,GAAG,CAAC,SAAS,CAAC,UAAU,GAAG,CAAC,CAAC,EAAE;YAClD,KAAK,CAAC,IAAI,CAAC,EAAE,IAAI,EAAE,OAAO,EAAE,IAAI,EAAE,IAAI,GAAG,CAAC,EAAE,KAAK,OAAA,EAAE,CAAC,CAAA;YACpD,KAAK,IAAI,CAAC,CAAA;SACX;aAAM,IAAI,SAAS,IAAI,CAAC,CAAC,IAAI,GAAG,CAAC,SAAS,CAAC,UAAU,GAAG,CAAC,CAAC,CAAC,EAAE;YAC5D,KAAK,CAAC,IAAI,CAAC,EAAE,IAAI,EAAE,OAAO,EAAE,IAAI,EAAE,IAAI,GAAG,CAAC,EAAE,KAAK,OAAA,EAAE,CAAC,CAAA;YACpD,KAAK,IAAI,CAAC,CAAA;SACX;KACF;IACD,OAAO,KAAK,CAAA;AACd,CAAC;AAzCD,8BAyCC"}

package/dist/index.d.ts

@@ -9,13 +9,12 @@ export default class LinearGenomeViewPlugin extends Plugin {
     name: string;
     exports: {
         BaseLinearDisplayComponent: (props: {
-            model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                type: import("mobx-state-tree").ISimpleType<string>;
-                rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-            } & {
-                height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
-                blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
+            model: {
+                id: string;
+                type: string;
+                rpcDriverName: string | undefined;
+                height: number;
+                blockState: import("mobx-state-tree").IMSTMap<import("mobx-state-tree").IModelType<{
                     key: import("mobx-state-tree").ISimpleType<string>;
                     region: import("mobx-state-tree").IModelType<{
                         refName: import("mobx-state-tree").ISimpleType<string>;
@@ -60,19 +59,64 @@ export default class LinearGenomeViewPlugin extends Plugin {
                     setError(error: unknown): void;
                     reload(): void;
                     beforeDestroy(): void;
-                }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-                userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-                userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-            }> & {
+                }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
+                    key: import("mobx-state-tree").ISimpleType<string>;
+                    region: import("mobx-state-tree").IModelType<{
+                        refName: import("mobx-state-tree").ISimpleType<string>;
+                        start: import("mobx-state-tree").ISimpleType<number>;
+                        end: import("mobx-state-tree").ISimpleType<number>;
+                        reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+                    } & {
+                        assemblyName: import("mobx-state-tree").ISimpleType<string>;
+                    }, {
+                        setRefName(newRefName: string): void;
+                    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+                    reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
+                    isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+                    isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+                }, {
+                    renderInProgress: AbortController | undefined;
+                    filled: boolean;
+                    reactElement: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
+                    features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
+                    layout: any;
+                    status: string;
+                    error: unknown;
+                    message: string | undefined;
+                    maxHeightReached: boolean;
+                    ReactComponent: ({ model, }: {
+                        model: any;
+                    }) => any;
+                    renderProps: any;
+                } & {
+                    doReload(): void;
+                    afterAttach(): void;
+                    setStatus(message: string): void;
+                    setLoading(abortController: AbortController): void;
+                    setMessage(messageText: string): void;
+                    setRendered(props: {
+                        reactElement: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>>;
+                        features: Map<string, import("@jbrowse/core/util").Feature>;
+                        layout: any;
+                        maxHeightReached: boolean;
+                        renderProps: any;
+                    } | undefined): void;
+                    setError(error: unknown): void;
+                    reload(): void;
+                    beforeDestroy(): void;
+                }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
+                userBpPerPxLimit: number | undefined;
+                userByteSizeLimit: number | undefined;
+            } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                 rendererTypeName: string;
                 error: unknown;
             } & {
                 readonly RenderingComponent: import("react").FC<{
-                    model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                        type: import("mobx-state-tree").ISimpleType<string>;
-                        rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                    }> & {
+                    model: {
+                        id: string;
+                        type: string;
+                        rpcDriverName: string | undefined;
+                    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                         rendererTypeName: string;
                         error: unknown;
                     } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -87,11 +131,11 @@ export default class LinearGenomeViewPlugin extends Plugin {
                     blockState?: Record<string, any> | undefined;
                 }>;
                 readonly DisplayBlurb: import("react").FC<{
-                    model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                        type: import("mobx-state-tree").ISimpleType<string>;
-                        rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                    }> & {
+                    model: {
+                        id: string;
+                        type: string;
+                        rpcDriverName: string | undefined;
+                    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                         rendererTypeName: string;
                         error: unknown;
                     } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -124,7 +168,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
                 estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
             } & {
-                readonly blockType: "staticBlocks" | "dynamicBlocks";
+                readonly blockType: "dynamicBlocks" | "staticBlocks";
                 readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
             } & {
                 readonly renderDelay: number;
@@ -177,7 +221,9 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
                 contextMenuItems(): {
                     label: string;
-                    icon: import("@material-ui/core/OverridableComponent").OverridableComponent<import("@material-ui/core").SvgIconTypeMap<{}, "svg">>;
+                    icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
+                        muiName: string;
+                    };
                     onClick: () => void;
                 }[];
                 renderProps(): any;
@@ -244,11 +290,11 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 error: unknown;
             } & {
                 readonly RenderingComponent: import("react").FC<{
-                    model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                        type: import("mobx-state-tree").ISimpleType<string>;
-                        rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                    }> & {
+                    model: {
+                        id: string;
+                        type: string;
+                        rpcDriverName: string | undefined;
+                    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                         rendererTypeName: string;
                         error: unknown;
                     } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -263,11 +309,11 @@ export default class LinearGenomeViewPlugin extends Plugin {
                     blockState?: Record<string, any> | undefined;
                 }>;
                 readonly DisplayBlurb: import("react").FC<{
-                    model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                        type: import("mobx-state-tree").ISimpleType<string>;
-                        rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                    }> & {
+                    model: {
+                        id: string;
+                        type: string;
+                        rpcDriverName: string | undefined;
+                    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                         rendererTypeName: string;
                         error: unknown;
                     } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -300,7 +346,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
                 estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
             } & {
-                readonly blockType: "staticBlocks" | "dynamicBlocks";
+                readonly blockType: "dynamicBlocks" | "staticBlocks";
                 readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
             } & {
                 readonly renderDelay: number;
@@ -353,7 +399,9 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
                 contextMenuItems(): {
                     label: string;
-                    icon: import("@material-ui/core/OverridableComponent").OverridableComponent<import("@material-ui/core").SvgIconTypeMap<{}, "svg">>;
+                    icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
+                        muiName: string;
+                    };
                     onClick: () => void;
                 }[];
                 renderProps(): any;
@@ -362,10 +410,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                     overrideHeight: number;
                 }): Promise<JSX.Element>;
             }, import("mobx-state-tree")._NotCustomized, {
-                id: string;
                 type: string;
-                rpcDriverName: string | undefined;
                 height: number;
+                id: string;
+                rpcDriverName: string | undefined;
                 userBpPerPxLimit: number | undefined;
                 userByteSizeLimit: number | undefined;
             }>>;
@@ -430,11 +478,11 @@ export default class LinearGenomeViewPlugin extends Plugin {
             error: unknown;
         } & {
             readonly RenderingComponent: import("react").FC<{
-                model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                    type: import("mobx-state-tree").ISimpleType<string>;
-                    rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                }> & {
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                     rendererTypeName: string;
                     error: unknown;
                 } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -449,11 +497,11 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 blockState?: Record<string, any> | undefined;
             }>;
             readonly DisplayBlurb: import("react").FC<{
-                model: import("mobx-state-tree").ModelInstanceTypeProps<{
-                    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                    type: import("mobx-state-tree").ISimpleType<string>;
-                    rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-                }> & {
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
                     rendererTypeName: string;
                     error: unknown;
                 } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
@@ -486,7 +534,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
             estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
             estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
         } & {
-            readonly blockType: "staticBlocks" | "dynamicBlocks";
+            readonly blockType: "dynamicBlocks" | "staticBlocks";
             readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
         } & {
             readonly renderDelay: number;
@@ -539,7 +587,9 @@ export default class LinearGenomeViewPlugin extends Plugin {
             trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
             contextMenuItems(): {
                 label: string;
-                icon: import("@material-ui/core/OverridableComponent").OverridableComponent<import("@material-ui/core").SvgIconTypeMap<{}, "svg">>;
+                icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
+                    muiName: string;
+                };
                 onClick: () => void;
             }[];
             renderProps(): any;
@@ -548,10 +598,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 overrideHeight: number;
             }): Promise<JSX.Element>;
         }, import("mobx-state-tree")._NotCustomized, {
-            id: string;
             type: string;
-            rpcDriverName: string | undefined;
             height: number;
+            id: string;
+            rpcDriverName: string | undefined;
             userBpPerPxLimit: number | undefined;
             userByteSizeLimit: number | undefined;
         }>;