@jbrowse/plugin-data-management 2.0.0 → 2.1.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js +23 -40
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js.map +1 -1
- package/dist/AddConnectionWidget/components/ConfigureConnection.js +6 -6
- package/dist/AddConnectionWidget/components/ConfigureConnection.js.map +1 -1
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +7 -9
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js.map +1 -1
- package/dist/AddConnectionWidget/index.js +1 -1
- package/dist/AddConnectionWidget/index.js.map +1 -1
- package/dist/AddConnectionWidget/model.js +2 -2
- package/dist/AddConnectionWidget/model.js.map +1 -1
- package/dist/AddTrackWidget/components/AddTrackWidget.d.ts +2 -2
- package/dist/AddTrackWidget/components/AddTrackWidget.js +24 -220
- package/dist/AddTrackWidget/components/AddTrackWidget.js.map +1 -1
- package/dist/AddTrackWidget/components/ConfirmTrack.js +72 -99
- package/dist/AddTrackWidget/components/ConfirmTrack.js.map +1 -1
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +7 -0
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js +162 -0
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -0
- package/dist/AddTrackWidget/components/TrackSourceSelect.js +11 -12
- package/dist/AddTrackWidget/components/TrackSourceSelect.js.map +1 -1
- package/dist/AddTrackWidget/index.js +1 -1
- package/dist/AddTrackWidget/index.js.map +1 -1
- package/dist/AddTrackWidget/model.js +34 -30
- package/dist/AddTrackWidget/model.js.map +1 -1
- package/dist/AssemblyManager/AssemblyAddForm.js +42 -61
- package/dist/AssemblyManager/AssemblyAddForm.js.map +1 -1
- package/dist/AssemblyManager/AssemblyEditor.js +4 -5
- package/dist/AssemblyManager/AssemblyEditor.js.map +1 -1
- package/dist/AssemblyManager/AssemblyManager.js +24 -41
- package/dist/AssemblyManager/AssemblyManager.js.map +1 -1
- package/dist/AssemblyManager/AssemblyTable.js +17 -18
- package/dist/AssemblyManager/AssemblyTable.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js +9 -29
- package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js +7 -8
- package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/Header.d.ts +10 -0
- package/dist/HierarchicalTrackSelectorWidget/components/Header.js +177 -0
- package/dist/HierarchicalTrackSelectorWidget/components/Header.js.map +1 -0
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +79 -365
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +17 -18
- package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/Node.d.ts +29 -0
- package/dist/HierarchicalTrackSelectorWidget/components/Node.js +173 -0
- package/dist/HierarchicalTrackSelectorWidget/components/Node.js.map +1 -0
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +19 -20
- package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/components/util.d.ts +3 -0
- package/dist/HierarchicalTrackSelectorWidget/components/util.js +9 -0
- package/dist/HierarchicalTrackSelectorWidget/components/util.js.map +1 -0
- package/dist/HierarchicalTrackSelectorWidget/configSchema.d.ts +2 -0
- package/dist/HierarchicalTrackSelectorWidget/configSchema.js +6 -0
- package/dist/HierarchicalTrackSelectorWidget/configSchema.js.map +1 -0
- package/dist/HierarchicalTrackSelectorWidget/index.d.ts +4 -2
- package/dist/HierarchicalTrackSelectorWidget/index.js +4 -4
- package/dist/HierarchicalTrackSelectorWidget/index.js.map +1 -1
- package/dist/HierarchicalTrackSelectorWidget/model.d.ts +10 -2
- package/dist/HierarchicalTrackSelectorWidget/model.js +102 -153
- package/dist/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/dist/PluginStoreWidget/components/CustomPluginForm.js +25 -43
- package/dist/PluginStoreWidget/components/CustomPluginForm.js.map +1 -1
- package/dist/PluginStoreWidget/components/InstalledPlugin.js +29 -47
- package/dist/PluginStoreWidget/components/InstalledPlugin.js.map +1 -1
- package/dist/PluginStoreWidget/components/InstalledPluginsList.js +12 -15
- package/dist/PluginStoreWidget/components/InstalledPluginsList.js.map +1 -1
- package/dist/PluginStoreWidget/components/PluginCard.js +23 -40
- package/dist/PluginStoreWidget/components/PluginCard.js.map +1 -1
- package/dist/PluginStoreWidget/components/PluginStoreWidget.js +49 -117
- package/dist/PluginStoreWidget/components/PluginStoreWidget.js.map +1 -1
- package/dist/PluginStoreWidget/index.js +1 -1
- package/dist/PluginStoreWidget/index.js.map +1 -1
- package/dist/PluginStoreWidget/model.js +6 -6
- package/dist/PluginStoreWidget/model.js.map +1 -1
- package/dist/SetDefaultSession/SetDefaultSession.js +9 -10
- package/dist/SetDefaultSession/SetDefaultSession.js.map +1 -1
- package/dist/index.d.ts +4 -1
- package/dist/index.js +38 -60
- package/dist/index.js.map +1 -1
- package/dist/ucsc-trackhub/configSchema.js +2 -2
- package/dist/ucsc-trackhub/configSchema.js.map +1 -1
- package/dist/ucsc-trackhub/model.js +33 -97
- package/dist/ucsc-trackhub/model.js.map +1 -1
- package/dist/ucsc-trackhub/ucscAssemblies.js +197 -1
- package/dist/ucsc-trackhub/ucscAssemblies.js.map +1 -1
- package/dist/ucsc-trackhub/ucscTrackHub.js +43 -132
- package/dist/ucsc-trackhub/ucscTrackHub.js.map +1 -1
- package/esm/AddTrackWidget/components/AddTrackWidget.d.ts +2 -2
- package/esm/AddTrackWidget/components/AddTrackWidget.js +22 -135
- package/esm/AddTrackWidget/components/AddTrackWidget.js.map +1 -1
- package/esm/AddTrackWidget/components/ConfirmTrack.js +5 -6
- package/esm/AddTrackWidget/components/ConfirmTrack.js.map +1 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +7 -0
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js +134 -0
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +1 -0
- package/esm/HierarchicalTrackSelectorWidget/components/Header.d.ts +10 -0
- package/esm/HierarchicalTrackSelectorWidget/components/Header.js +149 -0
- package/esm/HierarchicalTrackSelectorWidget/components/Header.js.map +1 -0
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +24 -223
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/Node.d.ts +29 -0
- package/esm/HierarchicalTrackSelectorWidget/components/Node.js +144 -0
- package/esm/HierarchicalTrackSelectorWidget/components/Node.js.map +1 -0
- package/esm/HierarchicalTrackSelectorWidget/components/util.d.ts +3 -0
- package/esm/HierarchicalTrackSelectorWidget/components/util.js +5 -0
- package/esm/HierarchicalTrackSelectorWidget/components/util.js.map +1 -0
- package/esm/HierarchicalTrackSelectorWidget/configSchema.d.ts +2 -0
- package/esm/HierarchicalTrackSelectorWidget/configSchema.js +4 -0
- package/esm/HierarchicalTrackSelectorWidget/configSchema.js.map +1 -0
- package/esm/HierarchicalTrackSelectorWidget/index.d.ts +4 -2
- package/esm/HierarchicalTrackSelectorWidget/index.js +3 -3
- package/esm/HierarchicalTrackSelectorWidget/index.js.map +1 -1
- package/esm/HierarchicalTrackSelectorWidget/model.d.ts +10 -2
- package/esm/HierarchicalTrackSelectorWidget/model.js +36 -32
- package/esm/HierarchicalTrackSelectorWidget/model.js.map +1 -1
- package/esm/PluginStoreWidget/components/PluginStoreWidget.js +1 -2
- package/esm/PluginStoreWidget/components/PluginStoreWidget.js.map +1 -1
- package/esm/index.d.ts +4 -1
- package/esm/index.js +1 -1
- package/esm/index.js.map +1 -1
- package/package.json +4 -5
- package/src/AddConnectionWidget/components/__snapshots__/AddConnectionWidget.test.js.snap +7 -7
- package/src/AddTrackWidget/components/{AddTrackWidget.test.js → AddTrackWidget.test.tsx} +17 -32
- package/src/AddTrackWidget/components/AddTrackWidget.tsx +36 -200
- package/src/AddTrackWidget/components/ConfirmTrack.tsx +10 -10
- package/src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx +205 -0
- package/src/HierarchicalTrackSelectorWidget/components/Header.tsx +287 -0
- package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.js +5 -4
- package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx +19 -438
- package/src/HierarchicalTrackSelectorWidget/components/Node.tsx +282 -0
- package/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.js.snap +24 -48
- package/src/HierarchicalTrackSelectorWidget/components/util.ts +11 -0
- package/src/HierarchicalTrackSelectorWidget/configSchema.ts +3 -0
- package/src/HierarchicalTrackSelectorWidget/index.ts +4 -6
- package/src/HierarchicalTrackSelectorWidget/model.ts +45 -41
- package/src/PluginStoreWidget/components/PluginStoreWidget.test.js +16 -4
- package/src/PluginStoreWidget/components/PluginStoreWidget.tsx +1 -2
- package/src/PluginStoreWidget/components/__snapshots__/PluginStoreWidget.test.js.snap +111 -123
- package/src/index.ts +4 -1
- package/src/AddTrackWidget/components/__snapshots__/AddTrackWidget.test.js.snap +0 -331
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@@ -1,6 +1,8 @@
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import React from 'react'
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import { getSnapshot, getParent } from 'mobx-state-tree'
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import { ThemeProvider } from '@mui/material/styles'
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import { render, cleanup, fireEvent, waitFor } from '@testing-library/react'
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import { createJBrowseTheme } from '@jbrowse/core/ui'
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import { createTestSession } from '@jbrowse/web/src/rootModel'
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import PluginStoreWidget from './PluginStoreWidget'
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@@ -42,14 +44,20 @@ describe('<PluginStoreWidget />', () => {
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it('renders with the available plugins', async () => {
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const { container, findByText } = render(
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<
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<ThemeProvider theme={createJBrowseTheme()}>
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<PluginStoreWidget model={model} />
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</ThemeProvider>,
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)
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await findByText('multiple sequence alignment browser plugin for JBrowse 2')
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expect(container.firstChild).toMatchSnapshot()
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})
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it('Installs a session plugin', async () => {
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const { findByText } = render(
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const { findByText } = render(
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<ThemeProvider theme={createJBrowseTheme()}>
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<PluginStoreWidget model={model} />
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</ThemeProvider>,
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)
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await findByText('multiple sequence alignment browser plugin for JBrowse 2')
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fireEvent.click(await findByText('Install'))
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await waitFor(() => {
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@@ -62,7 +70,9 @@ describe('<PluginStoreWidget />', () => {
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session = createTestSession({}, true)
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model = session.addWidget('PluginStoreWidget', 'pluginStoreWidget')
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const { findByText, getByText, getByLabelText } = render(
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<
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<ThemeProvider theme={createJBrowseTheme()}>
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<PluginStoreWidget model={model} />
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</ThemeProvider>,
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)
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await findByText('multiple sequence alignment browser plugin for JBrowse 2')
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fireEvent.click(getByText('Add custom plugin'))
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@@ -99,7 +109,9 @@ describe('<PluginStoreWidget />', () => {
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const { jbrowse } = rootModel
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jbrowse.addPlugin(plugins.plugins[0])
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const { findByText, getByText, getByTestId } = render(
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<
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<ThemeProvider theme={createJBrowseTheme()}>
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<PluginStoreWidget model={model} />
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</ThemeProvider>,
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)
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await findByText('multiple sequence alignment browser plugin for JBrowse 2')
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fireEvent.click(getByTestId('removePlugin-SVGPlugin'))
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@@ -37,8 +37,7 @@ const useStyles = makeStyles()(theme => ({
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adminBadge: {
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margin: '0.5em',
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borderRadius: 3,
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backgroundColor: '#FFB11D',
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backgroundColor: theme.palette.quaternary.main,
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padding: '1em',
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display: 'flex',
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alignContent: 'center',
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