@jbrowse/core 2.0.0 → 2.1.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (184) hide show
  1. package/BaseFeatureWidget/BaseFeatureDetail.d.ts +9 -3
  2. package/BaseFeatureWidget/BaseFeatureDetail.js +313 -581
  3. package/BaseFeatureWidget/SequenceFeatureDetails.js +213 -478
  4. package/BaseFeatureWidget/index.js +88 -126
  5. package/BaseFeatureWidget/types.d.ts +1 -0
  6. package/BaseFeatureWidget/types.js +1 -4
  7. package/BaseFeatureWidget/util.js +40 -75
  8. package/CorePlugin.js +55 -94
  9. package/Plugin.js +9 -34
  10. package/PluginLoader.js +153 -422
  11. package/PluginManager.d.ts +28 -33
  12. package/PluginManager.js +377 -666
  13. package/ReExports/Attributes.js +3 -10
  14. package/ReExports/BaseCard.js +3 -10
  15. package/ReExports/DataGrid.js +5 -12
  16. package/ReExports/FeatureDetails.js +3 -10
  17. package/ReExports/index.js +6 -12
  18. package/ReExports/list.d.ts +5 -0
  19. package/ReExports/list.js +271 -7
  20. package/ReExports/material-ui-colors.js +15 -16
  21. package/ReExports/modules.d.ts +11 -20
  22. package/ReExports/modules.js +453 -798
  23. package/TextSearch/BaseResults.js +51 -123
  24. package/TextSearch/TextSearchManager.js +66 -144
  25. package/assemblyManager/assembly.js +280 -555
  26. package/assemblyManager/assemblyConfigSchema.js +47 -64
  27. package/assemblyManager/assemblyManager.js +126 -272
  28. package/assemblyManager/index.js +9 -22
  29. package/configuration/configurationSchema.js +167 -203
  30. package/configuration/configurationSlot.js +248 -326
  31. package/configuration/index.js +19 -35
  32. package/configuration/util.js +131 -173
  33. package/data_adapters/BaseAdapter.d.ts +2 -2
  34. package/data_adapters/BaseAdapter.js +132 -521
  35. package/data_adapters/CytobandAdapter.js +40 -126
  36. package/data_adapters/dataAdapterCache.js +77 -158
  37. package/package.json +4 -5
  38. package/pluggableElementTypes/AdapterType.js +24 -79
  39. package/pluggableElementTypes/AddTrackWorkflowType.d.ts +17 -0
  40. package/pluggableElementTypes/AddTrackWorkflowType.js +20 -0
  41. package/pluggableElementTypes/ConnectionType.js +22 -65
  42. package/pluggableElementTypes/DisplayType.js +35 -82
  43. package/pluggableElementTypes/InternetAccountType.js +23 -64
  44. package/pluggableElementTypes/PluggableElementBase.js +8 -20
  45. package/pluggableElementTypes/RpcMethodType.js +85 -427
  46. package/pluggableElementTypes/TextSearchAdapterType.js +16 -55
  47. package/pluggableElementTypes/TrackType.js +26 -70
  48. package/pluggableElementTypes/ViewType.js +21 -63
  49. package/pluggableElementTypes/WidgetType.js +21 -64
  50. package/pluggableElementTypes/index.d.ts +4 -3
  51. package/pluggableElementTypes/index.js +42 -125
  52. package/pluggableElementTypes/models/BaseConnectionModelFactory.js +28 -43
  53. package/pluggableElementTypes/models/BaseDisplayModel.js +58 -95
  54. package/pluggableElementTypes/models/BaseTrackModel.js +139 -199
  55. package/pluggableElementTypes/models/BaseViewModel.js +24 -40
  56. package/pluggableElementTypes/models/InternetAccountModel.js +116 -263
  57. package/pluggableElementTypes/models/baseConnectionConfig.js +14 -25
  58. package/pluggableElementTypes/models/baseInternetAccountConfig.js +29 -38
  59. package/pluggableElementTypes/models/baseTrackConfig.js +106 -133
  60. package/pluggableElementTypes/models/index.js +21 -70
  61. package/pluggableElementTypes/renderers/BoxRendererType.js +132 -291
  62. package/pluggableElementTypes/renderers/CircularChordRendererType.js +8 -38
  63. package/pluggableElementTypes/renderers/ComparativeServerSideRendererType.js +60 -192
  64. package/pluggableElementTypes/renderers/FeatureRendererType.d.ts +0 -2
  65. package/pluggableElementTypes/renderers/FeatureRendererType.js +89 -255
  66. package/pluggableElementTypes/renderers/RendererType.js +31 -105
  67. package/pluggableElementTypes/renderers/ServerSideRenderedContent.js +61 -72
  68. package/pluggableElementTypes/renderers/ServerSideRendererType.js +112 -265
  69. package/pluggableElementTypes/renderers/index.js +19 -62
  70. package/pluggableElementTypes/renderers/util/serializableFilterChain.js +27 -65
  71. package/rpc/BaseRpcDriver.js +169 -405
  72. package/rpc/MainThreadRpcDriver.js +27 -150
  73. package/rpc/RpcManager.js +58 -159
  74. package/rpc/WebWorkerRpcDriver.js +54 -171
  75. package/rpc/configSchema.js +25 -49
  76. package/rpc/coreRpcMethods.d.ts +1 -3
  77. package/rpc/coreRpcMethods.js +221 -959
  78. package/rpc/remoteAbortSignals.js +46 -70
  79. package/tsconfig.build.tsbuildinfo +1 -1
  80. package/ui/AboutDialog.js +106 -162
  81. package/ui/App.js +157 -242
  82. package/ui/AssemblySelector.js +59 -120
  83. package/ui/CascadingMenu.js +101 -196
  84. package/ui/ColorPicker.d.ts +16 -0
  85. package/ui/ColorPicker.js +97 -0
  86. package/ui/Drawer.js +28 -61
  87. package/ui/DrawerWidget.js +108 -202
  88. package/ui/DropDownMenu.js +60 -91
  89. package/ui/EditableTypography.js +87 -149
  90. package/ui/ErrorMessage.js +41 -56
  91. package/ui/FactoryResetDialog.js +24 -57
  92. package/ui/FatalErrorDialog.js +59 -91
  93. package/ui/FileSelector/FileSelector.js +123 -189
  94. package/ui/FileSelector/LocalFileChooser.js +44 -75
  95. package/ui/FileSelector/UrlChooser.js +17 -38
  96. package/ui/FileSelector/index.js +6 -12
  97. package/ui/Icons.js +45 -69
  98. package/ui/Logo.js +57 -110
  99. package/ui/Menu.js +232 -354
  100. package/ui/PrerenderedCanvas.js +63 -87
  101. package/ui/ResizeHandle.js +87 -116
  102. package/ui/ReturnToImportFormDialog.js +32 -63
  103. package/ui/SanitizedHTML.js +64 -47
  104. package/ui/Snackbar.js +74 -101
  105. package/ui/SnackbarModel.js +37 -51
  106. package/ui/Tooltip.js +49 -76
  107. package/ui/ViewContainer.js +113 -196
  108. package/ui/colors.d.ts +10 -0
  109. package/ui/colors.js +78 -0
  110. package/ui/index.js +51 -181
  111. package/ui/react-colorful.d.ts +17 -0
  112. package/ui/react-colorful.js +455 -0
  113. package/ui/theme.d.ts +23 -1
  114. package/ui/theme.js +199 -247
  115. package/util/Base1DUtils.d.ts +32 -0
  116. package/util/Base1DUtils.js +174 -0
  117. package/util/Base1DViewModel.d.ts +16 -30
  118. package/util/Base1DViewModel.js +116 -293
  119. package/util/QuickLRU.js +84 -332
  120. package/util/TimeTraveller.d.ts +19 -0
  121. package/util/TimeTraveller.js +86 -0
  122. package/util/aborting.js +49 -127
  123. package/util/analytics.js +91 -154
  124. package/util/blockTypes.js +106 -240
  125. package/util/calculateDynamicBlocks.js +98 -128
  126. package/util/calculateStaticBlocks.js +105 -125
  127. package/util/color/cssColorsLevel4.js +156 -160
  128. package/util/color/index.js +33 -55
  129. package/util/compositeMap.js +49 -333
  130. package/util/formatFastaStrings.js +9 -14
  131. package/util/idMaker.js +18 -31
  132. package/util/index.d.ts +18 -32
  133. package/util/index.js +747 -1226
  134. package/util/io/RemoteFileWithRangeCache.js +88 -257
  135. package/util/io/index.js +95 -169
  136. package/util/jexl.js +60 -115
  137. package/util/jexlStrings.js +24 -29
  138. package/util/layouts/BaseLayout.js +1 -4
  139. package/util/layouts/GranularRectLayout.js +388 -555
  140. package/util/layouts/MultiLayout.js +41 -109
  141. package/util/layouts/PrecomputedLayout.js +56 -112
  142. package/util/layouts/PrecomputedMultiLayout.js +22 -59
  143. package/util/layouts/SceneGraph.js +127 -197
  144. package/util/layouts/index.js +29 -66
  145. package/util/mst-reflection.js +55 -71
  146. package/util/offscreenCanvasPonyfill.js +66 -134
  147. package/util/offscreenCanvasUtils.d.ts +2 -7
  148. package/util/offscreenCanvasUtils.js +49 -146
  149. package/util/range.js +29 -40
  150. package/util/rxjs.js +20 -27
  151. package/util/simpleFeature.js +88 -152
  152. package/util/stats.js +91 -151
  153. package/util/tracks.js +130 -173
  154. package/util/types/index.js +110 -179
  155. package/util/types/mst.js +91 -146
  156. package/util/types/util.js +1 -4
  157. package/util/when.js +54 -101
  158. package/BaseFeatureWidget/SequenceFeatureDetails.test.js +0 -122
  159. package/BaseFeatureWidget/index.test.js +0 -69
  160. package/TextSearch/BaseResults.test.js +0 -42
  161. package/configuration/configurationSchema.test.js +0 -266
  162. package/configuration/configurationSlot.test.js +0 -69
  163. package/configuration/util.test.js +0 -39
  164. package/data_adapters/BaseAdapter.test.js +0 -200
  165. package/declare.d.js +0 -1
  166. package/pluggableElementTypes/RpcMethodType.test.js +0 -118
  167. package/pluggableElementTypes/renderers/declare.d.js +0 -1
  168. package/pluggableElementTypes/renderers/util/serializableFilterChain.test.js +0 -20
  169. package/rpc/BaseRpcDriver.test.js +0 -540
  170. package/rpc/declaration.d.js +0 -1
  171. package/ui/FatalErrorDialog.test.js +0 -82
  172. package/ui/SanitizedHTML.test.js +0 -36
  173. package/ui/theme.test.js +0 -92
  174. package/util/Base1DViewModel.test.js +0 -130
  175. package/util/calculateDynamicBlocks.test.js +0 -74
  176. package/util/calculateStaticBlocks.test.js +0 -297
  177. package/util/declare.d.js +0 -1
  178. package/util/formatFastaStrings.test.js +0 -40
  179. package/util/index.test.js +0 -213
  180. package/util/jexlStrings.test.js +0 -48
  181. package/util/layouts/GranularRectLayout.test.js +0 -99
  182. package/util/range.test.js +0 -64
  183. package/util/simpleFeature.test.js +0 -34
  184. package/util/stats.test.js +0 -172
@@ -1,266 +1,132 @@
1
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  "use strict";
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-
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- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
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-
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- Object.defineProperty(exports, "__esModule", {
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- value: true
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- exports.InterRegionPaddingBlock = exports.ElidedBlock = exports.ContentBlock = exports.BlockSet = exports.BaseBlock = void 0;
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- var _assertThisInitialized2 = _interopRequireDefault(require("@babel/runtime/helpers/assertThisInitialized"));
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-
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- var _inherits2 = _interopRequireDefault(require("@babel/runtime/helpers/inherits"));
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-
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- var _possibleConstructorReturn2 = _interopRequireDefault(require("@babel/runtime/helpers/possibleConstructorReturn"));
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- var _getPrototypeOf2 = _interopRequireDefault(require("@babel/runtime/helpers/getPrototypeOf"));
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- var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
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- var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
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- function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
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-
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- function BlockSet() {
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- var blocks = arguments.length > 0 && arguments[0] !== undefined ? arguments[0] : [];
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- (0, _classCallCheck2.default)(this, BlockSet);
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- this.blocks = blocks;
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-
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- (0, _createClass2.default)(BlockSet, [{
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- key: "push",
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- value: function push(block) {
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- if (block instanceof ElidedBlock) {
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- if (this.blocks.length) {
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- var lastBlock = this.blocks[this.blocks.length - 1];
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-
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- if (lastBlock instanceof ElidedBlock) {
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- lastBlock.push(block);
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- return;
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- }
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ exports.InterRegionPaddingBlock = exports.ElidedBlock = exports.ContentBlock = exports.BaseBlock = exports.BlockSet = void 0;
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+ class BlockSet {
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+ constructor(blocks = []) {
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+ this.blocks = blocks;
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+ }
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+ push(block) {
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+ if (block instanceof ElidedBlock) {
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+ if (this.blocks.length) {
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+ const lastBlock = this.blocks[this.blocks.length - 1];
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+ if (lastBlock instanceof ElidedBlock) {
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+ lastBlock.push(block);
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+ return;
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+ }
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+ }
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  }
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- }
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-
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- this.blocks.push(block);
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+ this.blocks.push(block);
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  }
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- }, {
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- key: "getBlocks",
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- value: function getBlocks() {
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- return this.blocks;
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+ getBlocks() {
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+ return this.blocks;
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  }
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- }, {
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- key: "getRegions",
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- value: function getRegions() {
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- return this.blocks.map(function (block) {
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- return block.toRegion();
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- });
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+ getRegions() {
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+ return this.blocks.map(block => block.toRegion());
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  }
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- }, {
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- key: "map",
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- value: function map(func, thisarg) {
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- return this.blocks.map(func, thisarg);
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+ map(func, thisarg) {
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+ return this.blocks.map(func, thisarg);
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  }
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- }, {
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- key: "forEach",
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- value: function forEach(func, thisarg) {
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- return this.blocks.forEach(func, thisarg);
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+ forEach(func, thisarg) {
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+ return this.blocks.forEach(func, thisarg);
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  }
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- }, {
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- key: "length",
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- get: function get() {
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- return this.blocks.length;
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+ get length() {
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+ return this.blocks.length;
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  }
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- }, {
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- key: "totalWidthPx",
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- get: function get() {
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- return this.blocks.length ? this.blocks.map(function (blocks) {
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- return blocks.widthPx;
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- }).reduce(function (a, b) {
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- return a + b;
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- }) : 0;
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+ get totalWidthPx() {
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+ return this.blocks.length
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+ ? this.blocks.map(blocks => blocks.widthPx).reduce((a, b) => a + b)
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+ : 0;
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  }
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- }, {
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- key: "totalWidthPxWithoutBorders",
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- get: function get() {
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- return this.blocks.length ? this.blocks.filter(function (block) {
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- return block.variant !== 'boundary';
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- }).map(function (blocks) {
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- return blocks.widthPx;
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- }).reduce(function (a, b) {
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- return a + b;
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- }) : 0;
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+ get totalWidthPxWithoutBorders() {
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+ return this.blocks.length
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+ ? this.blocks
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+ .filter(block => block.variant !== 'boundary')
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+ .map(blocks => blocks.widthPx)
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+ .reduce((a, b) => a + b)
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+ : 0;
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  }
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- }, {
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- key: "offsetPx",
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- get: function get() {
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- return this.blocks.length ? this.blocks[0].offsetPx : 0;
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+ get offsetPx() {
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+ return this.blocks.length ? this.blocks[0].offsetPx : 0;
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  }
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- }, {
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- key: "contentBlocks",
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- get: function get() {
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- return this.blocks.filter(function (block) {
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- return block instanceof ContentBlock;
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- });
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+ get contentBlocks() {
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+ return this.blocks.filter(block => block instanceof ContentBlock);
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  }
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- }, {
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- key: "totalBp",
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- get: function get() {
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- return this.contentBlocks.map(function (block) {
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- return block.end - block.start;
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- }).reduce(function (a, b) {
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- return a + b;
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- }, 0);
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+ get totalBp() {
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+ return this.contentBlocks
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+ .map(block => block.end - block.start)
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+ .reduce((a, b) => a + b, 0);
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  }
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- }]);
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- return BlockSet;
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- }();
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-
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+ }
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  exports.BlockSet = BlockSet;
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-
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- var BaseBlock = /*#__PURE__*/function () {
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- /**
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- * a block that should be shown as filled with data
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- */
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- // eslint-disable-next-line @typescript-eslint/no-explicit-any
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- function BaseBlock(data) {
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- (0, _classCallCheck2.default)(this, BaseBlock);
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- (0, _defineProperty2.default)(this, "regionNumber", void 0);
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- (0, _defineProperty2.default)(this, "reversed", void 0);
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- (0, _defineProperty2.default)(this, "refName", void 0);
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- (0, _defineProperty2.default)(this, "start", void 0);
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- (0, _defineProperty2.default)(this, "end", void 0);
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- (0, _defineProperty2.default)(this, "assemblyName", void 0);
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- (0, _defineProperty2.default)(this, "key", void 0);
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- (0, _defineProperty2.default)(this, "offsetPx", void 0);
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- (0, _defineProperty2.default)(this, "widthPx", 0);
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- (0, _defineProperty2.default)(this, "variant", void 0);
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- (0, _defineProperty2.default)(this, "isLeftEndOfDisplayedRegion", void 0);
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- Object.assign(this, data);
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- this.assemblyName = data.assemblyName;
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- this.refName = data.refName;
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- this.start = data.start;
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- this.end = data.end;
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- this.key = data.key;
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- this.offsetPx = data.offsetPx;
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- }
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- /**
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- * rename the reference sequence of this block and return a new one
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- *
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- * @param refName -
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- * @returns either a new block with a renamed reference sequence,
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- * or the same block, if the ref name is not actually different
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- */
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- key: "renameReference",
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- value: function renameReference(refName) {
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- if (this.refName && refName !== this.refName) {
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- // eslint-disable-next-line @typescript-eslint/no-explicit-any
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- return new this.constructor(_objectSpread(_objectSpread({}, this), {}, {
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- refName: refName
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- }));
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- }
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-
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- return this;
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+ class BaseBlock {
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+ /**
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+ * a block that should be shown as filled with data
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+ */
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+ // eslint-disable-next-line @typescript-eslint/no-explicit-any
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+ constructor(data) {
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+ this.widthPx = 0;
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+ Object.assign(this, data);
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+ this.assemblyName = data.assemblyName;
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+ this.refName = data.refName;
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+ this.start = data.start;
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+ this.end = data.end;
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+ this.key = data.key;
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+ this.offsetPx = data.offsetPx;
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+ }
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+ /**
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+ * rename the reference sequence of this block and return a new one
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+ *
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+ * @param refName -
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+ * @returns either a new block with a renamed reference sequence,
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+ * or the same block, if the ref name is not actually different
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+ */
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+ renameReference(refName) {
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+ if (this.refName && refName !== this.refName) {
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+ // eslint-disable-next-line @typescript-eslint/no-explicit-any
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+ return new this.constructor({ ...this, refName });
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+ }
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+ return this;
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  }
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- }, {
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- key: "toRegion",
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- value: function toRegion() {
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- return {
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- refName: this.refName,
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- start: this.start,
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- end: this.end,
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- assemblyName: this.assemblyName,
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- reversed: this.reversed
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- };
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+ toRegion() {
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+ return {
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+ refName: this.refName,
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+ start: this.start,
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+ end: this.end,
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+ assemblyName: this.assemblyName,
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+ reversed: this.reversed,
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+ };
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  }
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- }]);
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- return BaseBlock;
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- }();
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-
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+ }
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  exports.BaseBlock = BaseBlock;
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-
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- var ContentBlock = /*#__PURE__*/function (_BaseBlock) {
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- (0, _inherits2.default)(ContentBlock, _BaseBlock);
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-
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- var _super = _createSuper(ContentBlock);
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-
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- function ContentBlock() {
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- (0, _classCallCheck2.default)(this, ContentBlock);
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- return _super.apply(this, arguments);
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- }
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-
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- return (0, _createClass2.default)(ContentBlock);
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- }(BaseBlock);
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+ class ContentBlock extends BaseBlock {
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+ }
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+ exports.ContentBlock = ContentBlock;
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  /**
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  * marker block representing one or more blocks that are
207
106
  * too small to be shown at the current zoom level
208
107
  */
209
-
210
-
211
- exports.ContentBlock = ContentBlock;
212
-
213
- var ElidedBlock = /*#__PURE__*/function (_BaseBlock2) {
214
- (0, _inherits2.default)(ElidedBlock, _BaseBlock2);
215
-
216
- var _super2 = _createSuper(ElidedBlock);
217
-
218
- // eslint-disable-next-line @typescript-eslint/no-explicit-any
219
- function ElidedBlock(data) {
220
- var _this;
221
-
222
- (0, _classCallCheck2.default)(this, ElidedBlock);
223
- _this = _super2.call(this, data);
224
- (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "widthPx", void 0);
225
- (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "elidedBlockCount", 0);
226
- _this.widthPx = data.widthPx;
227
- return _this;
228
- }
229
-
230
- (0, _createClass2.default)(ElidedBlock, [{
231
- key: "push",
232
- value: function push(otherBlock) {
233
- this.elidedBlockCount += 1;
234
-
235
- if (otherBlock) {
236
- this.refName = '';
237
- this.start = 0;
238
- this.end = 0;
239
- this.widthPx += otherBlock.widthPx;
240
- }
108
+ class ElidedBlock extends BaseBlock {
109
+ // eslint-disable-next-line @typescript-eslint/no-explicit-any
110
+ constructor(data) {
111
+ super(data);
112
+ this.elidedBlockCount = 0;
113
+ this.widthPx = data.widthPx;
241
114
  }
242
- }]);
243
- return ElidedBlock;
244
- }(BaseBlock);
115
+ push(otherBlock) {
116
+ this.elidedBlockCount += 1;
117
+ if (otherBlock) {
118
+ this.refName = '';
119
+ this.start = 0;
120
+ this.end = 0;
121
+ this.widthPx += otherBlock.widthPx;
122
+ }
123
+ }
124
+ }
125
+ exports.ElidedBlock = ElidedBlock;
245
126
  /**
246
127
  * marker block that sits between two different displayed regions
247
128
  * and provides a thick border between them
248
129
  */
249
-
250
-
251
- exports.ElidedBlock = ElidedBlock;
252
-
253
- var InterRegionPaddingBlock = /*#__PURE__*/function (_BaseBlock3) {
254
- (0, _inherits2.default)(InterRegionPaddingBlock, _BaseBlock3);
255
-
256
- var _super3 = _createSuper(InterRegionPaddingBlock);
257
-
258
- function InterRegionPaddingBlock() {
259
- (0, _classCallCheck2.default)(this, InterRegionPaddingBlock);
260
- return _super3.apply(this, arguments);
261
- }
262
-
263
- return (0, _createClass2.default)(InterRegionPaddingBlock);
264
- }(BaseBlock);
265
-
266
- exports.InterRegionPaddingBlock = InterRegionPaddingBlock;
130
+ class InterRegionPaddingBlock extends BaseBlock {
131
+ }
132
+ exports.InterRegionPaddingBlock = InterRegionPaddingBlock;
@@ -1,20 +1,8 @@
1
1
  "use strict";
2
-
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
4
-
5
- Object.defineProperty(exports, "__esModule", {
6
- value: true
7
- });
8
- exports.default = calculateDynamicBlocks;
9
-
10
- var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
11
-
12
- var _range = require("./range");
13
-
14
- var _ = require(".");
15
-
16
- var _blockTypes = require("./blockTypes");
17
-
2
+ Object.defineProperty(exports, "__esModule", { value: true });
3
+ const range_1 = require("./range");
4
+ const _1 = require(".");
5
+ const blockTypes_1 = require("./blockTypes");
18
6
  /**
19
7
  * returns a BlockSet of which the `blocks` attribute is an array of 'dynamic
20
8
  * blocks', which are blocks representing only the regions that are visible in
@@ -34,116 +22,98 @@ var _blockTypes = require("./blockTypes");
34
22
  *
35
23
  * @returns BlockSet of `{ refName, startBp, end, offset, reversed? }`
36
24
  */
37
- function calculateDynamicBlocks(model) {
38
- var padding = arguments.length > 1 && arguments[1] !== undefined ? arguments[1] : true;
39
- var elision = arguments.length > 2 && arguments[2] !== undefined ? arguments[2] : true;
40
- var offsetPx = model.offsetPx,
41
- displayedRegions = model.displayedRegions,
42
- bpPerPx = model.bpPerPx,
43
- width = model.width,
44
- minimumBlockWidth = model.minimumBlockWidth,
45
- interRegionPaddingWidth = model.interRegionPaddingWidth;
46
-
47
- if (!width) {
48
- throw new Error('view has no width, cannot calculate displayed blocks');
49
- }
50
-
51
- var blocks = new _blockTypes.BlockSet();
52
- var displayedRegionLeftPx = 0;
53
- var windowLeftPx = offsetPx;
54
- var windowRightPx = windowLeftPx + width;
55
- displayedRegions.forEach(function (region, regionNumber) {
56
- var assemblyName = region.assemblyName,
57
- refName = region.refName,
58
- regionStart = region.start,
59
- regionEnd = region.end,
60
- reversed = region.reversed;
61
- var displayedRegionRightPx = displayedRegionLeftPx + (regionEnd - regionStart) / bpPerPx;
62
- var regionWidthPx = (regionEnd - regionStart) / bpPerPx;
63
-
64
- if (displayedRegionLeftPx < windowRightPx && displayedRegionRightPx > windowLeftPx) {
65
- // this displayed region overlaps the view, so make a record for it
66
- var _intersection = (0, _range.intersection2)(windowLeftPx, windowRightPx, displayedRegionLeftPx, displayedRegionRightPx),
67
- _intersection2 = (0, _slicedToArray2.default)(_intersection, 2),
68
- leftPx = _intersection2[0],
69
- rightPx = _intersection2[1];
70
-
71
- var start;
72
- var end;
73
- var isLeftEndOfDisplayedRegion;
74
- var isRightEndOfDisplayedRegion;
75
- var blockOffsetPx;
76
-
77
- if (reversed) {
78
- start = Math.max(regionStart, regionEnd - (rightPx - displayedRegionLeftPx) * bpPerPx);
79
- end = regionEnd - (leftPx - displayedRegionLeftPx) * bpPerPx;
80
- isLeftEndOfDisplayedRegion = end === regionEnd;
81
- isRightEndOfDisplayedRegion = start === regionStart;
82
- blockOffsetPx = displayedRegionLeftPx + (regionEnd - end) / bpPerPx;
83
- } else {
84
- start = (leftPx - displayedRegionLeftPx) * bpPerPx + regionStart;
85
- end = Math.min(regionEnd, (rightPx - displayedRegionLeftPx) * bpPerPx + regionStart);
86
- isLeftEndOfDisplayedRegion = start === regionStart;
87
- isRightEndOfDisplayedRegion = end === regionEnd;
88
- blockOffsetPx = displayedRegionLeftPx + (start - regionStart) / bpPerPx;
89
- }
90
-
91
- var widthPx = (end - start) / bpPerPx;
92
- var blockData = {
93
- assemblyName: assemblyName,
94
- refName: refName,
95
- start: start,
96
- end: end,
97
- reversed: reversed,
98
- offsetPx: blockOffsetPx,
99
- parentRegion: region,
100
- regionNumber: regionNumber,
101
- widthPx: widthPx,
102
- isLeftEndOfDisplayedRegion: isLeftEndOfDisplayedRegion,
103
- isRightEndOfDisplayedRegion: isRightEndOfDisplayedRegion,
104
- key: ''
105
- };
106
- blockData.key = "".concat((0, _.assembleLocString)(blockData), "-").concat(regionNumber).concat(reversed ? '-reversed' : '');
107
-
108
- if (padding && blocks.length === 0 && isLeftEndOfDisplayedRegion) {
109
- blocks.push(new _blockTypes.InterRegionPaddingBlock({
110
- key: "".concat(blockData.key, "-beforeFirstRegion"),
111
- widthPx: -offsetPx,
112
- offsetPx: blockData.offsetPx + offsetPx,
113
- variant: 'boundary'
114
- }));
115
- }
116
-
117
- if (elision && regionWidthPx < minimumBlockWidth) {
118
- blocks.push(new _blockTypes.ElidedBlock(blockData));
119
- } else {
120
- blocks.push(new _blockTypes.ContentBlock(blockData));
121
- }
122
-
123
- if (padding) {
124
- // insert a inter-region padding block if we are crossing a displayed region
125
- if (regionWidthPx >= minimumBlockWidth && blockData.isRightEndOfDisplayedRegion && regionNumber < displayedRegions.length - 1) {
126
- blocks.push(new _blockTypes.InterRegionPaddingBlock({
127
- key: "".concat(blockData.key, "-rightpad"),
128
- widthPx: interRegionPaddingWidth,
129
- offsetPx: blockData.offsetPx + blockData.widthPx
130
- }));
131
- displayedRegionLeftPx += interRegionPaddingWidth;
132
- }
133
-
134
- if (regionNumber === displayedRegions.length - 1 && blockData.isRightEndOfDisplayedRegion) {
135
- blockOffsetPx = blockData.offsetPx + blockData.widthPx;
136
- blocks.push(new _blockTypes.InterRegionPaddingBlock({
137
- key: "".concat(blockData.key, "-afterLastRegion"),
138
- widthPx: width - blockOffsetPx + offsetPx,
139
- offsetPx: blockOffsetPx,
140
- variant: 'boundary'
141
- }));
142
- }
143
- }
25
+ function calculateDynamicBlocks(model, padding = true, elision = true) {
26
+ const { offsetPx, displayedRegions, bpPerPx, width, minimumBlockWidth, interRegionPaddingWidth, } = model;
27
+ if (!width) {
28
+ throw new Error('view has no width, cannot calculate displayed blocks');
144
29
  }
145
-
146
- displayedRegionLeftPx += (regionEnd - regionStart) / bpPerPx;
147
- });
148
- return blocks;
149
- }
30
+ const blocks = new blockTypes_1.BlockSet();
31
+ let displayedRegionLeftPx = 0;
32
+ const windowLeftPx = offsetPx;
33
+ const windowRightPx = windowLeftPx + width;
34
+ displayedRegions.forEach((region, regionNumber) => {
35
+ const { assemblyName, refName, start: regionStart, end: regionEnd, reversed, } = region;
36
+ const displayedRegionRightPx = displayedRegionLeftPx + (regionEnd - regionStart) / bpPerPx;
37
+ const regionWidthPx = (regionEnd - regionStart) / bpPerPx;
38
+ if (displayedRegionLeftPx < windowRightPx &&
39
+ displayedRegionRightPx > windowLeftPx) {
40
+ // this displayed region overlaps the view, so make a record for it
41
+ const [leftPx, rightPx] = (0, range_1.intersection2)(windowLeftPx, windowRightPx, displayedRegionLeftPx, displayedRegionRightPx);
42
+ let start;
43
+ let end;
44
+ let isLeftEndOfDisplayedRegion;
45
+ let isRightEndOfDisplayedRegion;
46
+ let blockOffsetPx;
47
+ if (reversed) {
48
+ start = Math.max(regionStart, regionEnd - (rightPx - displayedRegionLeftPx) * bpPerPx);
49
+ end = regionEnd - (leftPx - displayedRegionLeftPx) * bpPerPx;
50
+ isLeftEndOfDisplayedRegion = end === regionEnd;
51
+ isRightEndOfDisplayedRegion = start === regionStart;
52
+ blockOffsetPx = displayedRegionLeftPx + (regionEnd - end) / bpPerPx;
53
+ }
54
+ else {
55
+ start = (leftPx - displayedRegionLeftPx) * bpPerPx + regionStart;
56
+ end = Math.min(regionEnd, (rightPx - displayedRegionLeftPx) * bpPerPx + regionStart);
57
+ isLeftEndOfDisplayedRegion = start === regionStart;
58
+ isRightEndOfDisplayedRegion = end === regionEnd;
59
+ blockOffsetPx = displayedRegionLeftPx + (start - regionStart) / bpPerPx;
60
+ }
61
+ const widthPx = (end - start) / bpPerPx;
62
+ const blockData = {
63
+ assemblyName,
64
+ refName,
65
+ start,
66
+ end,
67
+ reversed,
68
+ offsetPx: blockOffsetPx,
69
+ parentRegion: region,
70
+ regionNumber,
71
+ widthPx,
72
+ isLeftEndOfDisplayedRegion,
73
+ isRightEndOfDisplayedRegion,
74
+ key: '',
75
+ };
76
+ blockData.key = `${(0, _1.assembleLocString)(blockData)}-${regionNumber}${reversed ? '-reversed' : ''}`;
77
+ if (padding && blocks.length === 0 && isLeftEndOfDisplayedRegion) {
78
+ blocks.push(new blockTypes_1.InterRegionPaddingBlock({
79
+ key: `${blockData.key}-beforeFirstRegion`,
80
+ widthPx: -offsetPx,
81
+ offsetPx: blockData.offsetPx + offsetPx,
82
+ variant: 'boundary',
83
+ }));
84
+ }
85
+ if (elision && regionWidthPx < minimumBlockWidth) {
86
+ blocks.push(new blockTypes_1.ElidedBlock(blockData));
87
+ }
88
+ else {
89
+ blocks.push(new blockTypes_1.ContentBlock(blockData));
90
+ }
91
+ if (padding) {
92
+ // insert a inter-region padding block if we are crossing a displayed region
93
+ if (regionWidthPx >= minimumBlockWidth &&
94
+ blockData.isRightEndOfDisplayedRegion &&
95
+ regionNumber < displayedRegions.length - 1) {
96
+ blocks.push(new blockTypes_1.InterRegionPaddingBlock({
97
+ key: `${blockData.key}-rightpad`,
98
+ widthPx: interRegionPaddingWidth,
99
+ offsetPx: blockData.offsetPx + blockData.widthPx,
100
+ }));
101
+ displayedRegionLeftPx += interRegionPaddingWidth;
102
+ }
103
+ if (regionNumber === displayedRegions.length - 1 &&
104
+ blockData.isRightEndOfDisplayedRegion) {
105
+ blockOffsetPx = blockData.offsetPx + blockData.widthPx;
106
+ blocks.push(new blockTypes_1.InterRegionPaddingBlock({
107
+ key: `${blockData.key}-afterLastRegion`,
108
+ widthPx: width - blockOffsetPx + offsetPx,
109
+ offsetPx: blockOffsetPx,
110
+ variant: 'boundary',
111
+ }));
112
+ }
113
+ }
114
+ }
115
+ displayedRegionLeftPx += (regionEnd - regionStart) / bpPerPx;
116
+ });
117
+ return blocks;
118
+ }
119
+ exports.default = calculateDynamicBlocks;