@cornerstonejs/tools 2.0.0-beta.1 → 2.0.0-beta.3

package/dist/cjs/tools/OrientationMarkerTool.d.ts

@@ -0,0 +1,88 @@
+import vtkAnnotatedCubeActor from '@kitware/vtk.js/Rendering/Core/AnnotatedCubeActor';
+import { BaseTool } from './base';
+declare class OrientationMarkerTool extends BaseTool {
+    static toolName: any;
+    static CUBE: number;
+    static AXIS: number;
+    static VTPFILE: number;
+    orientationMarkers: any;
+    polyDataURL: any;
+    static OVERLAY_MARKER_TYPES: {
+        ANNOTATED_CUBE: number;
+        AXES: number;
+        CUSTOM: number;
+    };
+    configuration_invalidated: boolean;
+    constructor(toolProps?: {}, defaultToolProps?: {
+        configuration: {
+            orientationWidget: {
+                enabled: boolean;
+                viewportCorner: import("@kitware/vtk.js/Interaction/Widgets/OrientationMarkerWidget/Constants").Corners;
+                viewportSize: number;
+                minPixelSize: number;
+                maxPixelSize: number;
+            };
+            overlayMarkerType: number;
+            overlayConfiguration: {
+                [x: number]: {
+                    faceProperties: {
+                        xPlus: {
+                            text: string;
+                            faceColor: string;
+                            faceRotation: number;
+                        };
+                        xMinus: {
+                            text: string;
+                            faceColor: string;
+                            faceRotation: number;
+                        };
+                        yPlus: {
+                            text: string;
+                            faceColor: string;
+                            fontColor: string;
+                            faceRotation: number;
+                        };
+                        yMinus: {
+                            text: string;
+                            faceColor: string;
+                            fontColor: string;
+                        };
+                        zPlus: {
+                            text: string;
+                        };
+                        zMinus: {
+                            text: string;
+                        };
+                    };
+                    defaultStyle: {
+                        fontStyle: string;
+                        fontFamily: string;
+                        fontColor: string;
+                        fontSizeScale: (res: any) => number;
+                        faceColor: string;
+                        edgeThickness: number;
+                        edgeColor: string;
+                        resolution: number;
+                    };
+                    polyDataURL?: undefined;
+                } | {
+                    faceProperties?: undefined;
+                    defaultStyle?: undefined;
+                    polyDataURL?: undefined;
+                } | {
+                    polyDataURL: string;
+                    faceProperties?: undefined;
+                    defaultStyle?: undefined;
+                };
+            };
+        };
+    });
+    onSetToolEnabled: () => void;
+    onSetToolActive: () => void;
+    private initViewports;
+    addAxisActorInViewport(viewport: any): Promise<void>;
+    private createCustomActor;
+    private createAnnotationCube;
+    createAnnotatedCubeActor(): Promise<vtkAnnotatedCubeActor>;
+}
+export default OrientationMarkerTool;

package/dist/cjs/tools/OrientationMarkerTool.js

@@ -0,0 +1,193 @@
+"use strict";
+var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
+    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
+    return new (P || (P = Promise))(function (resolve, reject) {
+        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
+        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
+        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
+        step((generator = generator.apply(thisArg, _arguments || [])).next());
+    });
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const OrientationMarkerWidget_1 = __importDefault(require("@kitware/vtk.js/Interaction/Widgets/OrientationMarkerWidget"));
+const AnnotatedCubeActor_1 = __importDefault(require("@kitware/vtk.js/Rendering/Core/AnnotatedCubeActor"));
+const AxesActor_1 = __importDefault(require("@kitware/vtk.js/Rendering/Core/AxesActor"));
+const Actor_1 = __importDefault(require("@kitware/vtk.js/Rendering/Core/Actor"));
+const Mapper_1 = __importDefault(require("@kitware/vtk.js/Rendering/Core/Mapper"));
+const XMLPolyDataReader_1 = __importDefault(require("@kitware/vtk.js/IO/XML/XMLPolyDataReader"));
+const PolyData_1 = __importDefault(require("@kitware/vtk.js/Common/DataModel/PolyData"));
+const base_1 = require("./base");
+const core_1 = require("@cornerstonejs/core");
+const viewportFilters_1 = require("../utilities/viewportFilters");
+const OverlayMarkerType = {
+    ANNOTATED_CUBE: 1,
+    AXES: 2,
+    CUSTOM: 3,
+};
+class OrientationMarkerTool extends base_1.BaseTool {
+    constructor(toolProps = {}, defaultToolProps = {
+        configuration: {
+            orientationWidget: {
+                enabled: true,
+                viewportCorner: OrientationMarkerWidget_1.default.Corners.BOTTOM_RIGHT,
+                viewportSize: 0.15,
+                minPixelSize: 100,
+                maxPixelSize: 300,
+            },
+            overlayMarkerType: OrientationMarkerTool.OVERLAY_MARKER_TYPES.ANNOTATED_CUBE,
+            overlayConfiguration: {
+                [OrientationMarkerTool.OVERLAY_MARKER_TYPES.ANNOTATED_CUBE]: {
+                    faceProperties: {
+                        xPlus: { text: 'R', faceColor: '#ffff00', faceRotation: 90 },
+                        xMinus: { text: 'L', faceColor: '#ffff00', faceRotation: 270 },
+                        yPlus: {
+                            text: 'P',
+                            faceColor: '#00ffff',
+                            fontColor: 'white',
+                            faceRotation: 180,
+                        },
+                        yMinus: { text: 'A', faceColor: '#00ffff', fontColor: 'white' },
+                        zPlus: { text: 'S' },
+                        zMinus: { text: 'I' },
+                    },
+                    defaultStyle: {
+                        fontStyle: 'bold',
+                        fontFamily: 'Arial',
+                        fontColor: 'black',
+                        fontSizeScale: (res) => res / 2,
+                        faceColor: '#0000ff',
+                        edgeThickness: 0.1,
+                        edgeColor: 'black',
+                        resolution: 400,
+                    },
+                },
+                [OrientationMarkerTool.OVERLAY_MARKER_TYPES.AXES]: {},
+                [OrientationMarkerTool.OVERLAY_MARKER_TYPES.CUSTOM]: {
+                    polyDataURL: 'https://raw.githubusercontent.com/Slicer/Slicer/80ad0a04dacf134754459557bf2638c63f3d1d1b/Base/Logic/Resources/OrientationMarkers/Human.vtp',
+                },
+            },
+        },
+    }) {
+        super(toolProps, defaultToolProps);
+        this.configuration_invalidated = true;
+        this.onSetToolEnabled = () => {
+            this.initViewports();
+            this.configuration_invalidated = true;
+        };
+        this.onSetToolActive = () => {
+            this.initViewports();
+        };
+        this.orientationMarkers = {};
+        this.configuration_invalidated = true;
+    }
+    initViewports() {
+        const renderingEngines = (0, core_1.getRenderingEngines)();
+        const renderingEngine = renderingEngines[0];
+        if (!renderingEngine) {
+            return;
+        }
+        let viewports = renderingEngine.getViewports();
+        viewports = (0, viewportFilters_1.filterViewportsWithToolEnabled)(viewports, this.getToolName());
+        viewports.forEach((viewport) => this.addAxisActorInViewport(viewport));
+    }
+    addAxisActorInViewport(viewport) {
+        return __awaiter(this, void 0, void 0, function* () {
+            const viewportId = viewport.id;
+            const type = this.configuration.overlayMarkerType;
+            const overlayConfiguration = this.configuration.overlayConfiguration[type];
+            if (this.orientationMarkers[viewportId]) {
+                const { actor, orientationWidget } = this.orientationMarkers[viewportId];
+                viewport.getRenderer().removeActor(actor);
+                orientationWidget.setEnabled(false);
+            }
+            let actor;
+            if (type === 1) {
+                actor = this.createAnnotationCube(overlayConfiguration);
+            }
+            else if (type === 2) {
+                actor = AxesActor_1.default.newInstance();
+            }
+            else if (type === 3) {
+                actor = yield this.createCustomActor();
+            }
+            const renderer = viewport.getRenderer();
+            const renderWindow = viewport
+                .getRenderingEngine()
+                .offscreenMultiRenderWindow.getRenderWindow();
+            const { enabled, viewportCorner, viewportSize, minPixelSize, maxPixelSize, } = this.configuration.orientationWidget;
+            const orientationWidget = OrientationMarkerWidget_1.default.newInstance({
+                actor,
+                interactor: renderWindow.getInteractor(),
+                parentRenderer: renderer,
+            });
+            orientationWidget.setEnabled(enabled);
+            orientationWidget.setViewportCorner(viewportCorner);
+            orientationWidget.setViewportSize(viewportSize);
+            orientationWidget.setMinPixelSize(minPixelSize);
+            orientationWidget.setMaxPixelSize(maxPixelSize);
+            orientationWidget.updateMarkerOrientation();
+            this.orientationMarkers[viewportId] = {
+                orientationWidget,
+                actor,
+            };
+            renderer.resetCamera();
+            renderWindow.render();
+            viewport.getRenderingEngine().render();
+            this.configuration_invalidated = false;
+        });
+    }
+    createCustomActor() {
+        return __awaiter(this, void 0, void 0, function* () {
+            const url = this.configuration.overlayConfiguration[OverlayMarkerType.CUSTOM]
+                .polyDataURL;
+            const response = yield fetch(url);
+            const arrayBuffer = yield response.arrayBuffer();
+            const vtpReader = XMLPolyDataReader_1.default.newInstance();
+            vtpReader.parseAsArrayBuffer(arrayBuffer);
+            vtpReader.update();
+            const polyData = PolyData_1.default.newInstance();
+            polyData.shallowCopy(vtpReader.getOutputData());
+            polyData.getPointData().setActiveScalars('Color');
+            const mapper = Mapper_1.default.newInstance();
+            mapper.setInputData(polyData);
+            mapper.setColorModeToDirectScalars();
+            const actor = Actor_1.default.newInstance();
+            actor.setMapper(mapper);
+            actor.rotateZ(180);
+            return actor;
+        });
+    }
+    createAnnotationCube(overlayConfiguration) {
+        const actor = AnnotatedCubeActor_1.default.newInstance();
+        actor.setDefaultStyle(Object.assign({}, overlayConfiguration.defaultStyle));
+        actor.setXPlusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.xPlus));
+        actor.setXMinusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.xMinus));
+        actor.setYPlusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.yPlus));
+        actor.setYMinusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.yMinus));
+        actor.setZPlusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.zPlus));
+        actor.setZMinusFaceProperty(Object.assign({}, overlayConfiguration.faceProperties.zMinus));
+        return actor;
+    }
+    createAnnotatedCubeActor() {
+        return __awaiter(this, void 0, void 0, function* () {
+            const axes = AnnotatedCubeActor_1.default.newInstance();
+            const { faceProperties, defaultStyle } = this.configuration.annotatedCube;
+            axes.setDefaultStyle(defaultStyle);
+            Object.keys(faceProperties).forEach((key) => {
+                const methodName = `set${key.charAt(0).toUpperCase() + key.slice(1)}FaceProperty`;
+                axes[methodName](faceProperties[key]);
+            });
+            return axes;
+        });
+    }
+}
+OrientationMarkerTool.CUBE = 1;
+OrientationMarkerTool.AXIS = 2;
+OrientationMarkerTool.VTPFILE = 3;
+OrientationMarkerTool.OVERLAY_MARKER_TYPES = OverlayMarkerType;
+OrientationMarkerTool.toolName = 'OrientationMarker';
+exports.default = OrientationMarkerTool;
+//# sourceMappingURL=OrientationMarkerTool.js.map

package/dist/cjs/tools/OrientationMarkerTool.js.map

@@ -0,0 +1 @@
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package/dist/cjs/tools/OverlayGridTool.d.ts

@@ -0,0 +1,31 @@
+import type { Types } from '@cornerstonejs/core';
+import { PublicToolProps, ToolProps, SVGDrawingHelper, Annotation } from '../types';
+import AnnotationDisplayTool from './base/AnnotationDisplayTool';
+export interface OverlayGridAnnotation extends Annotation {
+    data: {
+        viewportData: Map<string, object>;
+        pointSets: Array<object>;
+    };
+}
+declare class OverlayGridTool extends AnnotationDisplayTool {
+    static toolName: any;
+    touchDragCallback: any;
+    mouseDragCallback: any;
+    _throttledCalculateCachedStats: any;
+    isDrawing: boolean;
+    isHandleOutsideImage: boolean;
+    constructor(toolProps?: PublicToolProps, defaultToolProps?: ToolProps);
+    onSetToolEnabled: () => void;
+    onSetToolActive: () => void;
+    _init: () => void;
+    calculateImageIdPointSets: (imageId: string) => {
+        pointSet1: Types.Point3[];
+        pointSet2: Types.Point3[];
+    };
+    renderAnnotation: (enabledElement: Types.IEnabledElement, svgDrawingHelper: SVGDrawingHelper) => boolean;
+    private initializeViewportData;
+    private isPerpendicular;
+    private isParallel;
+    private getImageIdNormal;
+}
+export default OverlayGridTool;

package/dist/cjs/tools/OverlayGridTool.js

@@ -0,0 +1,170 @@
+"use strict";
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const gl_matrix_1 = require("gl-matrix");
+const core_1 = require("@cornerstonejs/core");
+const annotationState_1 = require("../stateManagement/annotation/annotationState");
+const ToolGroupManager_1 = require("../store/ToolGroupManager");
+const drawingSvg_1 = require("../drawingSvg");
+const triggerAnnotationRenderForViewportIds_1 = __importDefault(require("../utilities/triggerAnnotationRenderForViewportIds"));
+const AnnotationDisplayTool_1 = __importDefault(require("./base/AnnotationDisplayTool"));
+const { EPSILON } = core_1.CONSTANTS;
+class OverlayGridTool extends AnnotationDisplayTool_1.default {
+    constructor(toolProps = {}, defaultToolProps = {
+        supportedInteractionTypes: ['Mouse', 'Touch'],
+        configuration: {
+            sourceImageIds: [],
+        },
+    }) {
+        super(toolProps, defaultToolProps);
+        this.onSetToolEnabled = () => {
+            this._init();
+        };
+        this.onSetToolActive = () => {
+            this._init();
+        };
+        this._init = () => {
+            const sourceImageIds = this.configuration.sourceImageIds;
+            if (!(sourceImageIds === null || sourceImageIds === void 0 ? void 0 : sourceImageIds.length)) {
+                console.warn('OverlayGridTool: No sourceImageIds provided in configuration');
+                return;
+            }
+            const imagePlaneModule = core_1.metaData.get('imagePlaneModule', sourceImageIds[0]);
+            if (!imagePlaneModule) {
+                console.warn('OverlayGridTool: No imagePlaneModule found for sourceImageIds');
+                return;
+            }
+            const { frameOfReferenceUID } = imagePlaneModule;
+            const viewportsInfo = (0, ToolGroupManager_1.getToolGroup)(this.toolGroupId).viewportsInfo;
+            if (!(viewportsInfo === null || viewportsInfo === void 0 ? void 0 : viewportsInfo.length)) {
+                console.warn('OverlayGridTool: No viewports found');
+                return;
+            }
+            const annotations = (0, annotationState_1.getAnnotations)(this.getToolName(), frameOfReferenceUID);
+            if (!(annotations === null || annotations === void 0 ? void 0 : annotations.length)) {
+                const pointSets = sourceImageIds.map((id) => {
+                    return this.calculateImageIdPointSets(id);
+                });
+                const newAnnotation = {
+                    highlighted: true,
+                    invalidated: true,
+                    metadata: {
+                        toolName: this.getToolName(),
+                        FrameOfReferenceUID: frameOfReferenceUID,
+                        referencedImageId: null,
+                    },
+                    data: {
+                        viewportData: new Map(),
+                        pointSets,
+                    },
+                };
+                (0, annotationState_1.addAnnotation)(newAnnotation, frameOfReferenceUID);
+            }
+            (0, triggerAnnotationRenderForViewportIds_1.default)((0, core_1.getRenderingEngine)(viewportsInfo[0].renderingEngineId), viewportsInfo.map(({ viewportId }) => viewportId));
+        };
+        this.calculateImageIdPointSets = (imageId) => {
+            const { imagePositionPatient, rows, columns, rowCosines, columnCosines, rowPixelSpacing, columnPixelSpacing, } = core_1.metaData.get('imagePlaneModule', imageId);
+            const topLeft = [...imagePositionPatient];
+            const topRight = [...imagePositionPatient];
+            const bottomLeft = [...imagePositionPatient];
+            const bottomRight = [...imagePositionPatient];
+            gl_matrix_1.vec3.scaleAndAdd(topRight, imagePositionPatient, columnCosines, columns * columnPixelSpacing);
+            gl_matrix_1.vec3.scaleAndAdd(bottomLeft, imagePositionPatient, rowCosines, rows * rowPixelSpacing);
+            gl_matrix_1.vec3.scaleAndAdd(bottomRight, bottomLeft, columnCosines, columns * columnPixelSpacing);
+            const pointSet1 = [topLeft, bottomLeft, topRight, bottomRight];
+            const pointSet2 = [topLeft, topRight, bottomLeft, bottomRight];
+            return { pointSet1, pointSet2 };
+        };
+        this.renderAnnotation = (enabledElement, svgDrawingHelper) => {
+            const sourceImageIds = this.configuration.sourceImageIds;
+            let renderStatus = false;
+            if (!(sourceImageIds === null || sourceImageIds === void 0 ? void 0 : sourceImageIds.length)) {
+                return renderStatus;
+            }
+            const { viewport: targetViewport, FrameOfReferenceUID } = enabledElement;
+            const targetImageIds = targetViewport.getImageIds();
+            if (targetImageIds.length < 2) {
+                return renderStatus;
+            }
+            const annotations = (0, annotationState_1.getAnnotations)(this.getToolName(), FrameOfReferenceUID);
+            if (!(annotations === null || annotations === void 0 ? void 0 : annotations.length)) {
+                return renderStatus;
+            }
+            const annotation = annotations[0];
+            const { annotationUID } = annotation;
+            const { focalPoint, viewPlaneNormal } = targetViewport.getCamera();
+            const styleSpecifier = {
+                toolGroupId: this.toolGroupId,
+                toolName: this.getToolName(),
+                viewportId: enabledElement.viewport.id,
+            };
+            const imageIdNormal = (this.getImageIdNormal(sourceImageIds[0]));
+            if (this.isParallel(viewPlaneNormal, imageIdNormal)) {
+                return renderStatus;
+            }
+            const targetViewportPlane = core_1.utilities.planar.planeEquation(viewPlaneNormal, focalPoint);
+            const pointSets = annotation.data.pointSets;
+            const viewportData = annotation.data.viewportData;
+            for (let i = 0; i < sourceImageIds.length; i++) {
+                const { pointSet1, pointSet2 } = pointSets[i];
+                const targetData = viewportData.get(targetViewport.id) ||
+                    this.initializeViewportData(viewportData, targetViewport.id);
+                if (!targetData.pointSetsToUse[i]) {
+                    let pointSetToUse = pointSet1;
+                    let topBottomVec = gl_matrix_1.vec3.subtract(gl_matrix_1.vec3.create(), pointSet1[0], pointSet1[1]);
+                    topBottomVec = gl_matrix_1.vec3.normalize(gl_matrix_1.vec3.create(), topBottomVec);
+                    if (this.isPerpendicular(topBottomVec, viewPlaneNormal)) {
+                        pointSetToUse = pointSet2;
+                    }
+                    targetData.pointSetsToUse[i] = pointSetToUse;
+                    targetData.lineStartsWorld[i] = core_1.utilities.planar.linePlaneIntersection(pointSetToUse[0], pointSetToUse[1], targetViewportPlane);
+                    targetData.lineEndsWorld[i] = core_1.utilities.planar.linePlaneIntersection(pointSetToUse[2], pointSetToUse[3], targetViewportPlane);
+                }
+                const lineStartWorld = targetData.lineStartsWorld[i];
+                const lineEndWorld = targetData.lineEndsWorld[i];
+                styleSpecifier.annotationUID = annotationUID;
+                const lineWidth = this.getStyle('lineWidth', styleSpecifier, annotation);
+                const lineDash = this.getStyle('lineDash', styleSpecifier, annotation);
+                const color = this.getStyle('color', styleSpecifier, annotation);
+                const shadow = this.getStyle('shadow', styleSpecifier, annotation);
+                const canvasCoordinates = [lineStartWorld, lineEndWorld].map((world) => targetViewport.worldToCanvas(world));
+                const dataId = `${annotationUID}-line`;
+                const lineUID = `${i}`;
+                (0, drawingSvg_1.drawLine)(svgDrawingHelper, annotationUID, lineUID, canvasCoordinates[0], canvasCoordinates[1], {
+                    color,
+                    width: lineWidth,
+                    lineDash,
+                    shadow,
+                }, dataId);
+            }
+            renderStatus = true;
+            return renderStatus;
+        };
+        this.initializeViewportData = (viewportData, id) => {
+            viewportData.set(id, {
+                pointSetsToUse: [],
+                lineStartsWorld: [],
+                lineEndsWorld: [],
+            });
+            return viewportData.get(id);
+        };
+        this.isPerpendicular = (vec1, vec2) => {
+            const dot = gl_matrix_1.vec3.dot(vec1, vec2);
+            return Math.abs(dot) < EPSILON;
+        };
+    }
+    isParallel(vec1, vec2) {
+        return Math.abs(gl_matrix_1.vec3.dot(vec1, vec2)) > 1 - EPSILON;
+    }
+    getImageIdNormal(imageId) {
+        const { imageOrientationPatient } = core_1.metaData.get('imagePlaneModule', imageId);
+        const rowCosineVec = gl_matrix_1.vec3.fromValues(imageOrientationPatient[0], imageOrientationPatient[1], imageOrientationPatient[2]);
+        const colCosineVec = gl_matrix_1.vec3.fromValues(imageOrientationPatient[3], imageOrientationPatient[4], imageOrientationPatient[5]);
+        return gl_matrix_1.vec3.cross(gl_matrix_1.vec3.create(), rowCosineVec, colCosineVec);
+    }
+}
+OverlayGridTool.toolName = 'OverlayGrid';
+exports.default = OverlayGridTool;
+//# sourceMappingURL=OverlayGridTool.js.map

package/dist/cjs/tools/OverlayGridTool.js.map

@@ -0,0 +1 @@
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package/dist/cjs/tools/PlanarRotateTool.js

@@ -34,8 +34,9 @@ class PlanarRotateTool extends base_1.BaseTool {
         if (gl_matrix_1.vec3.dot(viewPlaneNormal, cross) > 0) {
             angle = -angle;
         }
-        if (Number.isNaN(angle))
+        if (Number.isNaN(angle)) {
             return;
+        }
         if (viewport instanceof core_1.BaseVolumeViewport) {
             const rotAngle = (angle * Math.PI) / 180;
             const rotMat = gl_matrix_1.mat4.identity(new Float32Array(16));

package/dist/cjs/tools/PlanarRotateTool.js.map

@@ -1 +1 @@
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